mRNA_L-elsbetiae_contig8705.17732.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: D7FLQ8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ8_ECTSI) HSP 1 Score: 235 bits (599), Expect = 2.260e-69 Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 2 Query: 2 PSMDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSKE 361 PSMDLAPKVNEVLSKTC +VCVEELSLQ DHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRG+ KPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVL+IIMRNMSKE Sbjct: 2389 PSMDLAPKVNEVLSKTCARVCVEELSLQPDHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGEAKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLAIIMRNMSKE 2508
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: A0A482SY26_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY26_9ARCH) HSP 1 Score: 166 bits (420), Expect = 2.880e-45 Identity = 82/126 (65.08%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 2 PSMDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHN-------RGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 PS+DL PK+N+ L K C VC + L A+ F+ KV+Q+QELL+VRHSVM+LGPAGCGK+TVWKTL ACHN +G K TV ETVNPK+VT+DELYGYMTL K+WKDGVLSI+MRNMSK Sbjct: 232 PSLDLPPKLNQGLYKICADVCKIQ-GLGAEETFIAKVLQYQELLEVRHSVMLLGPAGCGKSTVWKTLAACHNHQQSASSKGAAKAVTVYETVNPKSVTTDELYGYMTLTKDWKDGVLSIVMRNMSK 356
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: F0XZT7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZT7_AURAN) HSP 1 Score: 159 bits (403), Expect = 5.700e-43 Identity = 79/120 (65.83%), Postives = 92/120 (76.67%), Query Frame = 2 Query: 2 PSMDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSKE 361 P +DL KVNE L ++VC +E LQ + F+ KVVQFQELLDVRHSVM+LGPAG GKTT++KTL CHN K K V E +NPKAVTSDELYGYMTL+K+WKDG LSI+MRNM KE Sbjct: 2200 PGLDLPTKVNEDLQALASRVCAKE-GLQGEDIFISKVVQFQELLDVRHSVMILGPAGAGKTTIYKTLAGCHNVDKPKAVCVYEAINPKAVTSDELYGYMTLSKDWKDGCLSIVMRNMCKE 2318
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: D7FYT3_ECTSI (Dynein heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT3_ECTSI) HSP 1 Score: 156 bits (394), Expect = 9.300e-42 Identity = 78/117 (66.67%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 8 MDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 +++A K++E L + V E LQ D FV+K VQFQELLDVRHSVM+LGPAGCGK+T+WKTL HN K K + V ETVNPKAVT DELYGYMTLAK+WKDGVLSIIMR MSK Sbjct: 1982 LEVATKMDETLKQKVVSVSTE-WGLQIDDTFVLKTVQFQELLDVRHSVMLLGPAGCGKSTIWKTLAQTHNMNKPKKTCVVETVNPKAVTGDELYGYMTLAKDWKDGVLSIIMRGMSK 2097
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: A0A2D4BRA7_PYTIN (Sporangia induced dynein heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BRA7_PYTIN) HSP 1 Score: 153 bits (386), Expect = 1.110e-40 Identity = 77/117 (65.81%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 8 MDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 +++APKVN L + C VC +LQ D FV+KV Q QEL+DVRHSVM+LGPAGC KTT W L C N GK K V ET+NPKAVTSDELYGYMTL+K+WKDGVLSIIMR MSK Sbjct: 1699 VEVAPKVNVSLREKCVTVCKAN-NLQHDDSFVLKVCQLQELIDVRHSVMLLGPAGCAKTTTWMALAKCWNLGKEKKICVYETLNPKAVTSDELYGYMTLSKDWKDGVLSIIMRGMSK 1814
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: K3X373_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X373_GLOUD) HSP 1 Score: 152 bits (385), Expect = 1.520e-40 Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 8 MDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 +++APKVN L + VC + +LQ D F++KV Q QEL+DVRHSVM+LGPAGC KTT W+TL+ C N GK K V ET+NPKAVTSDELYGYMTL+K+WKDGVLSIIMR MSK Sbjct: 1990 VEVAPKVNVELREKTVAVC-KASNLQHDDSFILKVCQLQELIDVRHSVMLLGPAGCAKTTTWQTLVKCWNLGKEKKICVYETLNPKAVTSDELYGYMTLSKDWKDGVLSIIMRGMSK 2105
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: F0W7Y1_9STRA (Dynein heavy chain putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7Y1_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.070e-40 Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 11 DLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 ++ PKVN L + C VC ++ +LQ + FV+KV Q QEL+DVRHSVM+LGPAGC KTT W+TL C N K K V ET+NPKAVTSDELYGYMTL+K+WKDGVLSIIMR MSK Sbjct: 2105 EVLPKVNATLKEKCVTVC-KQSNLQHEDSFVLKVCQLQELIDVRHSVMLLGPAGCAKTTTWQTLAKCWNLDKEKKVCVYETLNPKAVTSDELYGYMTLSKDWKDGVLSIIMRGMSK 2219
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: A0A835YNN0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN0_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.830e-40 Identity = 74/117 (63.25%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 8 MDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 +++ KVNE L C + + L Q D F+ K VQFQELLDVRHSVM+LGPAGC KTT+W+TL A HN K K + V ETVNPK+V+ DELYGYMTL+K+WKDGVLSIIMR MSK Sbjct: 2044 LEVPTKVNEALKAKCARAA-QTLGFQRDDTFLNKTVQFQELLDVRHSVMLLGPAGCAKTTIWRTLAAAHNLDKAKKTCVHETVNPKSVSGDELYGYMTLSKDWKDGVLSIIMRGMSK 2159
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: A0A024GB38_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GB38_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.830e-40 Identity = 75/116 (64.66%), Postives = 88/116 (75.86%), Query Frame = 2 Query: 11 DLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 ++ PKVN L + C VC + +LQ + FV+KV Q QEL+DVRHSVM+LGPAGC KTT W+TL C N K K V ET+NPKAVTSDELYGYMTL+K+WKDGVLSIIMR MSK Sbjct: 2108 EVLPKVNATLKEKCVTVCKQH-NLQHEDSFVLKVCQLQELIDVRHSVMLLGPAGCAKTTTWQTLAKCWNLDKEKKVCVYETLNPKAVTSDELYGYMTLSKDWKDGVLSIIMRGMSK 2222
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Match: B8C065_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C065_THAPS) HSP 1 Score: 150 bits (379), Expect = 9.780e-40 Identity = 77/112 (68.75%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 23 KVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVLGPAGCGKTTVWKTLMACHNRGKGKPSTVAETVNPKAVTSDELYGYMTLAKEWKDGVLSIIMRNMSK 358 KV+E L +V +E LQ D FV K FQELLDVRHSVM+LGPAGC KTT+WKTL HN K KP+ VAETVNPK+VT DELYGYMTLAK+WKDGVLSIIMR MSK Sbjct: 2000 KVDEDLKAKIVRVA-KERGLQYDEMFVNKTCNFQELLDVRHSVMLLGPAGCAKTTIWKTLQGAHNLDKPKPTCVAETVNPKSVTGDELYGYMTLAKDWKDGVLSIIMRGMSK 2110 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8705.17732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8705.17732.1 >prot_L-elsbetiae_contig8705.17732.1 ID=prot_L-elsbetiae_contig8705.17732.1|Name=mRNA_L-elsbetiae_contig8705.17732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp MDLAPKVNEVLSKTCTQVCVEELSLQADHDFVVKVVQFQELLDVRHSVMVback to top mRNA from alignment at L-elsbetiae_contig8705:1383..5992+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8705.17732.1 ID=mRNA_L-elsbetiae_contig8705.17732.1|Name=mRNA_L-elsbetiae_contig8705.17732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4610bp|location=Sequence derived from alignment at L-elsbetiae_contig8705:1383..5992+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8705:1383..5992+ >mRNA_L-elsbetiae_contig8705.17732.1 ID=mRNA_L-elsbetiae_contig8705.17732.1|Name=mRNA_L-elsbetiae_contig8705.17732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=708bp|location=Sequence derived from alignment at L-elsbetiae_contig8705:1383..5992+ (Laminarionema elsbetiae ELsaHSoW15)back to top |