mRNA_L-elsbetiae_contig8685.17712.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A1F3BM53_9DELT (Endo alpha-1,4 polygalactosaminidase (Fragment) n=1 Tax=Anaeromyxobacter sp. RBG_16_69_14 TaxID=1797238 RepID=A0A1F3BM53_9DELT) HSP 1 Score: 89.0 bits (219), Expect = 2.740e-19 Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 108 WKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 W+P PG +W W+L G+ G V +D DLFDN+A L+ AG VICYFSAG+YE WR D+ +FP + LG+ + Sbjct: 16 WQPAPGTSWQWQLTGSLDTGLDVEAYDIDLFDNSAGTIATLKAAGKKVICYFSAGSYENWRPDKGSFPAAALGNNL 91
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A7C5D3W5_9PROT (Endo alpha-1,4 polygalactosaminidase (Fragment) n=1 Tax=Nitratifractor sp. TaxID=2268144 RepID=A0A7C5D3W5_9PROT) HSP 1 Score: 84.7 bits (208), Expect = 6.090e-19 Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 3 Query: 75 PAAGVLGQDTWWKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 P + +W+KP PG +W W+L GT V ++D DLFD++ + L+++G VICYFSAG+YE WR+D++ F +S LG+ + Sbjct: 23 PNINPITNGSWYKPIPGTSWQWQLQGTINTAYNVDIYDIDLFDSSQELRKELKESGKKVICYFSAGSYENWRDDKSKFSKSLLGNPL 109
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A7V5WPV2_9DEIN (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A7V5WPV2_9DEIN) HSP 1 Score: 88.2 bits (217), Expect = 6.630e-19 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 108 WKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 W+P PG +W W+L+G V M+D DLFD + ALQ G +VICYFSAG+YE+WR D+ FP+ LG K+ Sbjct: 30 WQPQPGTSWQWQLSGDIDTSIDVEMYDIDLFDTSKETIRALQKDGKIVICYFSAGSYEDWRPDKGQFPKKLLGRKM 105
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A7V5FSX8_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7V5FSX8_9DELT) HSP 1 Score: 86.3 bits (212), Expect = 3.190e-18 Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 102 TWWKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 +WW+P PG +W W+L+GT V M+D DLFD + L + G VICYFSAG+YE WR D+ +P + LG + Sbjct: 22 SWWRPSPGTSWQWQLSGTIDTSFNVRMYDIDLFDTPQTVIDTLHNKGRKVICYFSAGSYENWRPDKDKYPNTILGKSL 99
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A3M1E1F7_9DELT (Endo alpha-1,4 polygalactosaminidase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1E1F7_9DELT) HSP 1 Score: 85.9 bits (211), Expect = 3.210e-18 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 75 PAAGVLGQDTWWKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 P+A +WW+P PG +W W+L+GT V M+D DLFD + + L AG VICYFSAG++E+WR D FP + LG+ + Sbjct: 38 PSATPTPAASWWQPVPGTSWQWQLSGTIDTSFDVQMYDIDLFDAPQSVIDQLHAAGRTVICYFSAGSWEDWRPDAGDFPPAVLGNPL 124
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A1V5XKM6_9DELT (Glyco_hydro_114 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5XKM6_9DELT) HSP 1 Score: 87.0 bits (214), Expect = 4.290e-18 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 108 WKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 W+P P +W W+L GT V M+D DLF+ + A +ALQ G +VICYFSAG++E WRED +FP S LG + Sbjct: 90 WQPPPKTSWQWQLTGTIDTSVDVTMYDIDLFETSQATIQALQQQGRIVICYFSAGSWENWREDANSFPSSVLGKTL 165
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A2E1AIM4_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E1AIM4_9CHLR) HSP 1 Score: 86.3 bits (212), Expect = 4.450e-18 Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 96 QDTWWKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 + +WW+P PG W W+L G V M+D DLFD + L + G VVICYFSAGTYE+WR D FP + LG + Sbjct: 31 EPSWWQPSPGTTWQWQLNGEVNTRYDVQMYDIDLFDTPQETIDKLHEDGRVVICYFSAGTYEDWRPDVDDFPEAILGKPL 110
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: UPI001CE32DF2 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Thalassolituus marinus TaxID=671053 RepID=UPI001CE32DF2) HSP 1 Score: 85.9 bits (211), Expect = 7.600e-18 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 63 LLLLPAAGVLGQDTWWKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 L L PAA G W++P GV+W W+L+GT G V ++D DLFD++ LQ G VICYFSAG+YE+WR+DE+ F LG + Sbjct: 35 LPLAPAAVTDGD--WYRPAVGVSWQWQLSGTVNDGYDVALYDIDLFDSSEDFIADLQQQGRKVICYFSAGSYEDWRDDESQFSSDDLGDTL 123
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A2D5PFC3_9GAMM (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2D5PFC3_9GAMM) HSP 1 Score: 85.5 bits (210), Expect = 9.100e-18 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 108 WKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGSKV 335 ++P PGV+W W+L+G G V ++D DLFDN+A LQ G VICYFSAG+YE WR+D F S LGS + Sbjct: 38 YQPAPGVSWQWQLSGDLNTGYDVEIYDIDLFDNSAETIAELQQQGRKVICYFSAGSYENWRDDAGEFEASDLGSNL 113
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Match: A0A815EZF9_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815EZF9_9BILA) HSP 1 Score: 85.1 bits (209), Expect = 1.020e-17 Identity = 38/75 (50.67%), Postives = 45/75 (60.00%), Query Frame = 3 Query: 105 WWKPGPGVNWDWRLAGTPKVGAGVGMFDTDLFDNNAADFEALQDAGIVVICYFSAGTYEEWREDEAAFPRSTLGS 329 WW P P W W+L GT V M+D DLFD A L+ AG VICYFSAG++E WR D + FP+S LGS Sbjct: 19 WWHPKPLTTWTWQLQGTIDTTKNVQMYDIDLFDTPIATISKLKQAGRTVICYFSAGSFENWRPDASKFPKSVLGS 93 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8685.17712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8685.17712.1 >prot_L-elsbetiae_contig8685.17712.1 ID=prot_L-elsbetiae_contig8685.17712.1|Name=mRNA_L-elsbetiae_contig8685.17712.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp MRGTKMRRRWREYLLLLPAAGVLGQDTWWKPGPGVNWDWRLAGTPKVGAGback to top mRNA from alignment at L-elsbetiae_contig8685:1767..4707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8685.17712.1 ID=mRNA_L-elsbetiae_contig8685.17712.1|Name=mRNA_L-elsbetiae_contig8685.17712.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2941bp|location=Sequence derived from alignment at L-elsbetiae_contig8685:1767..4707- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8685:1767..4707- >mRNA_L-elsbetiae_contig8685.17712.1 ID=mRNA_L-elsbetiae_contig8685.17712.1|Name=mRNA_L-elsbetiae_contig8685.17712.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig8685:1767..4707- (Laminarionema elsbetiae ELsaHSoW15)back to top |