mRNA_L-elsbetiae_contig8683.17711.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: D8LST6_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST6_ECTSI) HSP 1 Score: 342 bits (877), Expect = 6.570e-98 Identity = 375/816 (45.96%), Postives = 414/816 (50.74%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQPGRQEERGGLRDAFQDGSSAVNASPRGSVGGGSNDGSPRLSVGSRGGGSNSPRLLLAPLSTRSGTPPADCKAPASPRRSAPGSPRRLQMLDPLEPKPLLCTGQQQWPGVGGDLEDVKGVAADFEAQGGVGGVAGPAESKRSSGHGGEDYGGESDDKVCLLTRLLHYRPGNTFYTHADMHTCSHHSGSDSSGEDSHTSRAGRAGGRGRDFTLTMHPVRGIPNGGGGVHGHASPQAAAAAKR-----EPMIRMNSRLGATHPARSKTLSGLGGLGGSSATINMISGGAAAVPXXXXXSNVGIGXXXXXXXXXXXXXXXXXXXXXGIRGRGGVMKSRTMDLSNHLSSAPNTAAAXXXXXXAAEPLGVRPTSRSLSPPPLKHLGQHXXXXXXXRPGTIRQRTWSAGKPAASRQPDSDG--EEWKAATPEGDRRSHDEG----------------GGGLDGDVVGKGTGSLPPLSPRSAEEASRLRDGGRQGSSRGSSRHGRHRSSSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSPRY-----PSTSPKARRAGQEXXXXXXXXXXXXXXXXXXXXX--------DDYRLPPS----PRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----QGSSSPSRPHKSSSEGFKLPQSPSPRRHQHQPQRGRSQGAI--TDNSDASSRAGG-EISLPETAGG 2304 +VFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKD+LRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQ A++ RG GG P + P+ G P C SP S PG + P G K + GG G + P ++R D E ++ L + A+ ++HSGSDSSG++SH SR GR GGRGRDFTLTMHPVRG PNGG G +PMIRMNSRLGATHPAR KTLSGLGG+ SS TIN+ SG XXXXX XXXXXXXXXXXXXXGIR R GVMKSRTMDLS+HLS TA E P SRS+SPPPL+H GQH R GT+RQRTWSA E W PEGDRR H EG G G+ KGTG LP LSPRSA + R+ G GS SR R R+ S XXXXXXXXXXXX PRY P+TSP + G XXXXXXXXXXXXXXXXX DD S PR S QG SSPSR KSSSEGFKLPQSPS RR Q Q GRSQG + +D+S++SS+ G +L T GG Sbjct: 289 EVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDLLRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQ-------------------AIDWVTRGY------------------GGVEQP-AAVGPVIDEVGHPARSCSILWSP--SHPGQEGQGDSSSGRAP--------------GWTWRRRKAFRVMRKRWGGSGALRAPPSARRR-----RDIEEEVEEDEGHLVMV------------AETEGDANHSGSDSSGDESHNSRVGR-GGRGRDFTLTMHPVRGSPNGGSAHPGXXXXXXXXXXXXXXXTTKPMIRMNSRLGATHPARCKTLSGLGGV--SSTTINITSGXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXGIRSRTGVMKSRTMDLSHHLSRPAATAG---------EQRSQAP-SRSVSPPPLQHHGQHEHR----RRGTVRQRTWSAXXXXXXXXXXXXXXDETWGQGAPEGDRRDHGEGRDQEGXXXXXXXXXXXXXGHPGEE--KGTGILPSLSPRSAADTDPYRNDGSHGSG---SRPARPRTGSS---------PRGDGSGRHRDNHHQREERXXXXXXXXXXXXXXXPRYQPSMRPTTSPPSTAGGGNSRSRXXXXXXXXXXXXXXXXXXXKEGEDEDDRNRRDSGHLLPRSSCSPLLQEKQRDSAGGSGADRRDGEHENDVSYGHQGPSSPSRLRKSSSEGFKLPQSPSLRRQQLSRQ-GRSQGDVEHSDSSNSSSQPGATSAALSATIGG 991
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A6H5JP74_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP74_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.820e-91 Identity = 296/632 (46.84%), Postives = 330/632 (52.22%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAK--------------DILRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQPGRQEERG--GLRDAFQDGSSAVNASPRGSVGGGSNDGSPRLSVGSRGGGSNSPRLLLAPLSTRSGTPPADCKAPASPRRSAPGSP-------RRLQMLDP---LEPKPLLCTGQQQWPGVGGDLED-VKGVAADFEAQGGVGGVAGPAESKRSSGHGGEDYGGESDDKVCLLTRLLHYRPGNTFYTHADMHTCSHHSGSDSSGEDSHTSRAGRAGGRGRDFTLTMHPVRGIPNGGGGVHGHASPQAAAAAK----REPMIRMNSRLGATHPARSKTLSGLGGLGGSSATINMISGGAAAVPXXXXXSNVGIGXXXXXXXXXXXXXXXXXXXXXGIRGRGGVMKSRTMDLSNHLSSAPNTAAAXXXXXXAAEPLGVRPTSRSLSPPPLKHLGQHXXXXXXXRPGTIRQRTWSAGKPAAS--RQPDSDGEEWKAATPEGDRRSHDEGGGGLDGDVVG--------------KGTGSLPPLSPRSAEEASRLR-DGGRQGSSRGSSRHGRHRSSS 1752 +VFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKP ESLSPEAK D+LRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQ RG G+ G G P RL A L+T+ G A +P + R + G+ R + D L P+ C +W D+E+ V+ GGVG S+ G D+ L TR GSDSSG++SH SR GR GGRGRDFTLTMH VRG PNGG G +PMIRMNSRLGATHPAR KTLSGLGG+ SS TIN+ SGGA XXXXX XXXXXXXXXXXX IR R GVMKSRTMDLS+HLS TA E P SRS+SP P +H G+H R GT+RQRTWS + AA+ +Q +GE W PEGDRR HDE KGTG LPPLSPRSA + R DGG SR + RHR+ S Sbjct: 317 EVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPAESLSPEAKVARGTRGKTMFQAKDLLRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQVIDWVTRGYGGVEQPAAVGPVIDEV------------GHPA-------------RLQGARLATKVG---AGVSSPLADRARSSGAQVARVFRVMRKRWGDSGALLAPQSARC----RW-----DIEEEVEKDEGHLVMVGGVG---------ASTATGPADF--------TLRTR-----------------------GSDSSGDESHNSRVGR-GGRGRDFTLTMHSVRGSPNGGSAHPGXXXXXXXXXXXDGGITKPMIRMNSRLGATHPARCKTLSGLGGV--SSTTINVTSGGAVXXXXXXXXXXXXXXXXXXXXXXXXXXK---------IRSRTGVMKSRTMDLSHHLSQPAATAG---------EQRSQAP-SRSVSPLPFQHHGKHEHR----RRGTVRQRTWSPSEAAAAATQQQSDEGETWGQEAPEGDRRDHDEERDXXXXXXXXXXXXXXXXXHPGEEKGTGILPPLSPRSATDTDPYRNDGGHDSGSRPA----RHRTGS 841
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A024GBW1_9STRA (Protein kinase domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GBW1_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.670e-37 Identity = 77/116 (66.38%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLRFRNVT-----SLDNQPGRQEE 333 +VFRGTSNAGPPLDVWS+GVIL+A+LCGRLPFEG DLQG+NRPRE+ IR RIM+C+YK + LSP D++ +MLKLDPNERA+IPEIF HSW+R + T SL QP R +E Sbjct: 238 EVFRGTSNAGPPLDVWSLGVILYAILCGRLPFEGPDLQGSNRPRESVIRSRIMQCQYKLDDHLSPCVTDLIAQMLKLDPNERATIPEIFTHSWVRGISSTTLAIDSLSIQPTRSQE 353
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A7S3M4V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4V4_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.390e-36 Identity = 68/95 (71.58%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLR 285 +VF+GTSNAGPPLDVWS+GVILF +LCGRLPFEG DL GT RPRE I+ RIM+C+YK + L PE KD++RRML++DP+ERASIPEIFNH W+R Sbjct: 17 EVFKGTSNAGPPLDVWSLGVILFTMLCGRLPFEGQDLIGTKRPREQIIKSRIMKCQYKIDDHLGPEVKDLVRRMLQVDPSERASIPEIFNHVWMR 111
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A2P4X0N2_9STRA (CAMK/CAMKL protein kinase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X0N2_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.120e-36 Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 4 VFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLRFRNVTS 303 VFRGTSNAGPPLDVWS+GVILFA++CGRLPFEG DLQGTNRPRE IR RIM C++K LSP D++ RMLK DPNERA+IPEIF+H W+R TS Sbjct: 1 VFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGPDLQGTNRPRENVIRNRIMRCQFKLDTDLSPALTDLIVRMLKPDPNERATIPEIFSHPWVRGTTGTS 100
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A662XLY9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLY9_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.070e-36 Identity = 75/116 (64.66%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLR------------FRNVTSLDN 312 +VFRGTSNAGPPLDVWS+GVILFA++CGRLPFEGSDLQGTNRPRE IR RIM C++K E LSP D+L +MLK DP+ERA+IPEIF+H W+R F + TS DN Sbjct: 50 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGSDLQGTNRPRENVIRNRIMRCQFKLDEGLSPALTDLLLKMLKPDPSERATIPEIFSHPWVRGTAGSFGCLPTDFSSATSQDN 165
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A836CH35_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH35_9STRA) HSP 1 Score: 157 bits (398), Expect = 7.110e-36 Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQP 318 +VFRGTSNAGPPLDVWS+GV+LFA LCGRLPFEG+DL+G +R +EA+IRRRI+ C YK + LS EAKD++RRML+ DP+ERASIP++ +H WLR R+V LD QP Sbjct: 374 EVFRGTSNAGPPLDVWSLGVMLFAALCGRLPFEGTDLRGAHRAKEASIRRRILRCEYKMEDGLSSEAKDLVRRMLRPDPSERASIPDVLSHCWLRSRHVACLDLQP 479
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: H3G6Z1_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6Z1_PHYRM) HSP 1 Score: 145 bits (367), Expect = 2.960e-35 Identity = 67/93 (72.04%), Postives = 78/93 (83.87%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSW 279 +VFRGTSNAGPPLDVWS+G+ILFA++CGRLPFEG DL GTNRPRE IR RIM C++K E LSP D++ RMLK DPNERA+IPEIF+H W Sbjct: 186 EVFRGTSNAGPPLDVWSLGIILFAIVCGRLPFEGPDLLGTNRPRENVIRNRIMRCQFKLDEDLSPALTDLVIRMLKPDPNERATIPEIFSHPW 278
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A225W2F7_9STRA (CAMK/CAMKL protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W2F7_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.260e-35 Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLR 285 +VFRGTSNAGPPLDVWS+GVILFA++CGRLPFEG DLQGTNRPRE IR RIM C++K E LSP D++ RMLK DPNERA+IPEIF+HSW+R Sbjct: 286 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGPDLQGTNRPRENVIRNRIMRCQFKLDEDLSPALTDLIVRMLKPDPNERATIPEIFSHSWVR 380
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Match: A0A1V9YCU2_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YCU2_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.280e-35 Identity = 73/115 (63.48%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 1 QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAKDILRRMLKLDPNERASIPEIFNHSWLR----FRNVTSLDNQPGRQEE 333 +VFRGTSNAGPPLDVWS+GVILFA++CGRLPFEGSDL+GTNRPRE IR RIM +YK E+LSPE D++ RML+ DP ERA+IP+IF+H WLR F ++ S+ P ++ E Sbjct: 286 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGSDLKGTNRPRENVIRNRIMRVQYKLDETLSPEVTDLITRMLQPDPVERATIPQIFSHPWLRGKASFSSIESMMTSPSKEGE 400 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8683.17711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8683.17711.1 >prot_L-elsbetiae_contig8683.17711.1 ID=prot_L-elsbetiae_contig8683.17711.1|Name=mRNA_L-elsbetiae_contig8683.17711.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=927bp QVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRback to top mRNA from alignment at L-elsbetiae_contig8683:236..6516+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8683.17711.1 ID=mRNA_L-elsbetiae_contig8683.17711.1|Name=mRNA_L-elsbetiae_contig8683.17711.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6281bp|location=Sequence derived from alignment at L-elsbetiae_contig8683:236..6516+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8683:236..6516+ >mRNA_L-elsbetiae_contig8683.17711.1 ID=mRNA_L-elsbetiae_contig8683.17711.1|Name=mRNA_L-elsbetiae_contig8683.17711.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5562bp|location=Sequence derived from alignment at L-elsbetiae_contig8683:236..6516+ (Laminarionema elsbetiae ELsaHSoW15)back to top |