mRNA_L-elsbetiae_contig8676.17707.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5KV14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV14_9PHAE) HSP 1 Score: 122 bits (306), Expect = 2.230e-29 Identity = 60/131 (45.80%), Postives = 89/131 (67.94%), Query Frame = 3 Query: 279 LQVEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 LQVE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M +D+ A+ Sbjct: 130 LQVENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGRHASCLDDMWDVLDKRAFAH 260
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5JFD5_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD5_9PHAE) HSP 1 Score: 122 bits (306), Expect = 2.170e-28 Identity = 60/131 (45.80%), Postives = 89/131 (67.94%), Query Frame = 3 Query: 279 LQVEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 LQVE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M +D+ A+ Sbjct: 90 LQVENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGRHASCLDDMWDVLDKRAFAH 220
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5L6I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I4_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.610e-28 Identity = 60/131 (45.80%), Postives = 89/131 (67.94%), Query Frame = 3 Query: 279 LQVEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 LQVE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N+ EY+R++ AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M +D+ A+ Sbjct: 495 LQVENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNDETYGEYIRRYEALAMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGRHASCLDDMWDVLDKRAFAH 625
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5L723_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L723_9PHAE) HSP 1 Score: 118 bits (296), Expect = 4.450e-28 Identity = 58/129 (44.96%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 285 VEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 VE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R ++AL V V+ SH FKPS Q+Q AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M +D+ A+ Sbjct: 175 VENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRHYKALAVTVMVSHHAFKPSDAQMQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGQHASCLDDMWDVLDKRAFAH 303
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5JZC5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC5_9PHAE) HSP 1 Score: 116 bits (290), Expect = 4.790e-28 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 285 VEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERM 638 VE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M Sbjct: 143 VENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGRHASCLDDM 260
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5KWR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR8_9PHAE) HSP 1 Score: 112 bits (279), Expect = 6.440e-28 Identity = 54/118 (45.76%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 285 VEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERM 638 VE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH +FKPS QVQ AVRD +L QFP V+ V+ + ++ EAP+G A C + M Sbjct: 2 VENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHMFKPSDAQVQIAVRDFMLKQFPVVSGQVYKDEQLSMEAPFGRHASCQDDM 119
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5JI92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI92_9PHAE) HSP 1 Score: 119 bits (298), Expect = 7.690e-28 Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 3 Query: 279 LQVEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 LQVE +L+ + +GPS +A + KL A+ +D+ SG+DRLRSFGV+N E++R+ +AL + V SH FKPSV QVQ AVRDS+L QFP V+ V+ + ++ EAP G A CL+ M A+D+ A+ Sbjct: 166 LQVEKHLRKEPAGPSTYAFFIQKLVAAWDTQDKSSGIDRLRSFGVSNGEAYGEFIRRPKALAMTVTVSHHAFKPSVAQVQIAVRDSMLKQFPAVSGQVYKDEQLSMEAPLGRHASCLDDMWDALDKRAFAH 296
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5KBX0_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBX0_9PHAE) HSP 1 Score: 119 bits (298), Expect = 2.850e-27 Identity = 58/129 (44.96%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 285 VEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 VE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M +D+ A+ Sbjct: 471 VENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHAFKPSDAQVQIAVRDSMLNQFPVVSGQVYKHEQLSMEAPFGRHASCLDDMWDVLDKRAFAH 599
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5KUJ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 3.770e-27 Identity = 58/129 (44.96%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 285 VEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 VE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ M +D+ A+ Sbjct: 143 VENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGRHASCLDDMWDVLDKRAFAH 271
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Match: A0A6H5L243_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L243_9PHAE) HSP 1 Score: 118 bits (296), Expect = 5.130e-27 Identity = 58/130 (44.62%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 282 QVEAYLKTDASGPSAFALLMDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGVFKPSVTQVQTAVRDSLLTQFPTVASSVFTQDMVAQEAPWGTSADCLERMSTAVDQTLHAN 671 QVE +L+ + +GPS +A + KL+ A+ +D+ SG+DRLRSFGV+N EY+R+++AL + V+ SH FKPS QVQ AVRDS+L QFP V+ V+ + ++ EAP+G A CL+ +D+ A+ Sbjct: 136 QVENHLRKEPAGPSTYAFFIQKLAAAWDTQDKSSGIDRLRSFGVSNGETYGEYIRRYKALAMTVMVSHHAFKPSDAQVQIAVRDSMLKQFPVVSGQVYKDEQLSMEAPFGRHASCLDDTWDVLDKRAFAH 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8676.17707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8676.17707.1 >prot_L-elsbetiae_contig8676.17707.1 ID=prot_L-elsbetiae_contig8676.17707.1|Name=mRNA_L-elsbetiae_contig8676.17707.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp MDKLSHAFQIKDQRSGVDRLRSFGVANNVKIVEYVRQFRALVVMVLASHGback to top mRNA from alignment at L-elsbetiae_contig8676:5213..6999- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8676.17707.1 ID=mRNA_L-elsbetiae_contig8676.17707.1|Name=mRNA_L-elsbetiae_contig8676.17707.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1787bp|location=Sequence derived from alignment at L-elsbetiae_contig8676:5213..6999- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8676:5213..6999- >mRNA_L-elsbetiae_contig8676.17707.1 ID=mRNA_L-elsbetiae_contig8676.17707.1|Name=mRNA_L-elsbetiae_contig8676.17707.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig8676:5213..6999- (Laminarionema elsbetiae ELsaHSoW15)back to top |