mRNA_L-elsbetiae_contig856.17591.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig856.17591.1
Unique NamemRNA_L-elsbetiae_contig856.17591.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A6H5KEX7_9PHAE (Ribosomal_S13_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX7_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 7.020e-93
Identity = 148/151 (98.01%), Postives = 151/151 (100.00%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH+GGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRL+RYYRTNRKLAANWKYES+SASALVA
Sbjct:   38 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 188
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A6H5KYF2_9PHAE (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF2_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 3.890e-88
Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH+GGKGISKSSLPY+R  P WLK+SAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQV AITG+KILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRL+RYYRTNRKLAANWKY+SASASALVA
Sbjct:   21 MGRMHSGGKGISKSSLPYRRRVPLWLKVSAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 171
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: D7FP13_ECTSI (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP13_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 1.360e-85
Identity = 138/146 (94.52%), Postives = 144/146 (98.63%), Query Frame = 2 
Query:  272 TGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            +GGKGISKSSLPY+RS PSWLK+SAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQV AITG+KILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRL+RYYRTNRKLAANWKY+SASASALVA
Sbjct:   24 SGGKGISKSSLPYRRSAPSWLKVSAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 169
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A7S2V1V2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1V2_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.150e-82
Identity = 128/151 (84.77%), Postives = 145/151 (96.03%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH+ GKG++ S+LPYKR+PPSWLKISA++V +HVCKLAKKGL+PSQIGVILRDSNGIAQVR++TGSK+LR+LK NGLA EIPEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRL+RYYRTNRKLA NWKYES++ASALVA
Sbjct:    1 MGRMHSRGKGMASSALPYKRTPPSWLKISAKDVEDHVCKLAKKGLSPSQIGVILRDSNGIAQVRSVTGSKVLRLLKKNGLAPEIPEDLYMLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTNRKLAPNWKYESSTASALVA 151
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A6V1RUJ0_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUJ0_HETAK)

HSP 1 Score: 251 bits (641), Expect = 2.920e-80
Identity = 126/151 (83.44%), Postives = 141/151 (93.38%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMHT GKG+SKSS PYKRSPPSWLKI+A++V  H+CKLAKKGLTPSQIGV+LRDSNGIAQV+++TGSKILR+LK NGLA EIPEDLYMLIKKAV VRKHLERNR+D D+KFRLILIESRIHRL+RYYR NRKLA+NWKYES +ASALVA
Sbjct:    1 MGRMHTSGKGMSKSSRPYKRSPPSWLKITARDVETHICKLAKKGLTPSQIGVMLRDSNGIAQVKSVTGSKILRILKKNGLAPEIPEDLYMLIKKAVQVRKHLERNRKDHDAKFRLILIESRIHRLARYYRLNRKLASNWKYESDTASALVA 151
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: H3G9F0_PHYRM (Ribosomal_S13_N domain-containing protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G9F0_PHYRM)

HSP 1 Score: 247 bits (631), Expect = 9.470e-79
Identity = 121/151 (80.13%), Postives = 142/151 (94.04%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH+ GKG+SKS+ PYKRSPPSWLK+++++V +H+CK AKKGLTPSQIGVILRDS+GIAQV+++TGSK+LR+LK NGLA E+PEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRL+RYYR NRKL+ NWKYESA+AS LVA
Sbjct:    1 MGRMHSHGKGMSKSARPYKRSPPSWLKVTSEDVEDHICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRLLKKNGLAPELPEDLYMLIKKAVAVRKHLERNRQDKDSKFRLILIESRIHRLARYYRKNRKLSPNWKYESATASTLVA 151
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A6U5KTU7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KTU7_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.170e-77
Identity = 120/151 (79.47%), Postives = 138/151 (91.39%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH  GKGISKS+LPYKRSPPSWLKI++ +V EH+CKLAKKGLTPSQIGV+LRD +GIAQVR++TGSKI+R+LK  GLA EIPEDLYMLIKKAV+VRKHLE+NR+DKDSKFRLILIESRIHRL+RYYRT RKL  NW+Y SA+AS +VA
Sbjct:    1 MGRMHAPGKGISKSALPYKRSPPSWLKITSSDVEEHICKLAKKGLTPSQIGVVLRDQHGIAQVRSVTGSKIVRILKVQGLAPEIPEDLYMLIKKAVSVRKHLEKNRKDKDSKFRLILIESRIHRLARYYRTTRKLPPNWRYASATASTMVA 151
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A7S0SUB1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUB1_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.240e-76
Identity = 124/151 (82.12%), Postives = 139/151 (92.05%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH+GGKGISKSSLPYKRSPPSWLKISA +V + V KLAKKGLTPSQIGVILRD +G+AQV+++TG+K +R+LK  GLA  IPEDLYMLIKKAVAVRKHLERN++DKDSKFRLILIESRIHRL+RYYRT RKL ANWKYESA+ASALVA
Sbjct:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAAQVEDLVIKLAKKGLTPSQIGVILRDQHGVAQVKSVTGNKTVRILKKAGLAPTIPEDLYMLIKKAVAVRKHLERNKKDKDSKFRLILIESRIHRLARYYRTARKLEANWKYESATASALVA 151
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: B7FNY4_PHATC (Predicted protein n=3 Tax=Naviculales TaxID=38748 RepID=B7FNY4_PHATC)

HSP 1 Score: 241 bits (616), Expect = 1.750e-76
Identity = 119/150 (79.33%), Postives = 137/150 (91.33%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALV 706
            MGRMH  GKGIS+ +LP+KR+PPSWLK+S+ +V + VCKLAKKGLTPSQIGVILRDSNGIAQV+ +TG K++R+LKANGLA EIPEDLYMLIKKAV VRKHLERNR+DKDSKFRLILIESRIHRL+RYYRT RKL +NWKYESA+AS +V
Sbjct:    1 MGRMHAPGKGISRRALPFKRTPPSWLKVSSADVEDQVCKLAKKGLTPSQIGVILRDSNGIAQVKFVTGQKVVRILKANGLAPEIPEDLYMLIKKAVQVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTTRKLPSNWKYESATASTIV 150
[Close]
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Match: A0A7S3GY39_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GY39_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.750e-76
Identity = 122/151 (80.79%), Postives = 141/151 (93.38%), Query Frame = 2 
Query:  257 MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 709
            MGRMH+GGKGISKS+LPYKR+PPSWLK + ++V + V KLAK+GLTPSQIGVILRDSNGIAQV+++TG+KILR+LK +GLA  IPEDLYMLIKKAVAVRKHL+RN++DKDSKFRLILIESRIHRLSRYYRT RKL ANWKY+SA+ASALVA
Sbjct:    1 MGRMHSGGKGISKSALPYKRAPPSWLKTTPEQVEDQVNKLAKRGLTPSQIGVILRDSNGIAQVKSVTGNKILRILKKSGLAPAIPEDLYMLIKKAVAVRKHLDRNKKDKDSKFRLILIESRIHRLSRYYRTARKLDANWKYQSATASALVA 151
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig856.17591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEX7_9PHAE7.020e-9398.01Ribosomal_S13_N domain-containing protein n=2 Tax=... [more]
A0A6H5KYF2_9PHAE3.890e-8893.38Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
D7FP13_ECTSI1.360e-8594.52Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
A0A7S2V1V2_9STRA3.150e-8284.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1RUJ0_HETAK2.920e-8083.44Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
H3G9F0_PHYRM9.470e-7980.13Ribosomal_S13_N domain-containing protein n=30 Tax... [more]
A0A6U5KTU7_9STRA2.170e-7779.47Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0SUB1_9STRA1.240e-7682.12Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
B7FNY4_PHATC1.750e-7679.33Predicted protein n=3 Tax=Naviculales TaxID=38748 ... [more]
A0A7S3GY39_9STRA1.750e-7680.79Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig856contigL-elsbetiae_contig856:3147..5596 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.5
Seed ortholog evalue1.8e-75
Seed eggNOG ortholog2880.D7FJH0
Preferred nameRPS13
KEGG koko:K02953
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033119,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042274,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070013,GO:0070181,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904,GO:1990932
EggNOG free text desc.small ribosomal subunit rRNA binding
EggNOG OGsCOG0184@1,KOG0400@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Ec32 ortholog descriptionRibosomal protein S15
Ec32 orthologEc-14_006330.1
Exons3
Model size1108
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig856.17591.1prot_L-elsbetiae_contig856.17591.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig856 3543..5340 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816938.1938977-UTR-L-elsbetiae_contig856:3146..35421622816938.1938977-UTR-L-elsbetiae_contig856:3146..3542Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig856 3147..3542 -
1691683926.5278606-UTR-L-elsbetiae_contig856:3146..35421691683926.5278606-UTR-L-elsbetiae_contig856:3146..3542Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig856 3147..3542 -
1622816938.2435565-UTR-L-elsbetiae_contig856:5340..55961622816938.2435565-UTR-L-elsbetiae_contig856:5340..5596Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig856 5341..5596 -
1691683926.5740783-UTR-L-elsbetiae_contig856:5340..55961691683926.5740783-UTR-L-elsbetiae_contig856:5340..5596Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig856 5341..5596 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816938.2046528-CDS-L-elsbetiae_contig856:3542..37631622816938.2046528-CDS-L-elsbetiae_contig856:3542..3763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig856 3543..3763 -
1691683926.5403826-CDS-L-elsbetiae_contig856:3542..37631691683926.5403826-CDS-L-elsbetiae_contig856:3542..3763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig856 3543..3763 -
1622816938.217896-CDS-L-elsbetiae_contig856:4686..47741622816938.217896-CDS-L-elsbetiae_contig856:4686..4774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig856 4687..4774 -
1691683926.5510952-CDS-L-elsbetiae_contig856:4686..47741691683926.5510952-CDS-L-elsbetiae_contig856:4686..4774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig856 4687..4774 -
1622816938.2301354-CDS-L-elsbetiae_contig856:5193..53401622816938.2301354-CDS-L-elsbetiae_contig856:5193..5340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig856 5194..5340 -
1691683926.5619292-CDS-L-elsbetiae_contig856:5193..53401691683926.5619292-CDS-L-elsbetiae_contig856:5193..5340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig856 5194..5340 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig856.17591.1

>prot_L-elsbetiae_contig856.17591.1 ID=prot_L-elsbetiae_contig856.17591.1|Name=mRNA_L-elsbetiae_contig856.17591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
MGRMHTGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQI
GVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRK
HLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALV
A*
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mRNA from alignment at L-elsbetiae_contig856:3147..5596-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig856.17591.1 ID=mRNA_L-elsbetiae_contig856.17591.1|Name=mRNA_L-elsbetiae_contig856.17591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2450bp|location=Sequence derived from alignment at L-elsbetiae_contig856:3147..5596- (Laminarionema elsbetiae ELsaHSoW15)
GTGTTTGCTGCGCCAGCACACGCGAGCGATCCGGAAATGAAACGCAATGC
CGCGCACAGGGACCCGTTTGGTCTAGGCTGAACGGGTGCCCTGATTAACC
CCCCGTTGAAGTCCTCCCTCTCCCTGCCCGTGCCGTCGTCTCTCCCCTTC
CAATCCGATCGATTTCCTTCTCGGCGGGGCTGGCTGCTTTTTCGGGATGT
GGGTGTGTGTGCGCCTTGGTTCTTCGCGCCCCAACAAAAAAATGTATGGA
CGATAGATGGGGCGCATGCACACTGGCGGGAAGGGTATCTCCAAGTCGTC
CCTCCCCTACAAGAGGAGCCCGCCCTCGTGGCTCAAGATCTCCGCCCAGG
AGGTGACCGAGCACGTGTGCAAGCTGGCCAAGAAGGGCCTCACGCCGTCG
CAGGTAAGCCTTGACAGAGGAGAACTGGCGCACTTGTAGAAATTGTGTTT
TTGTGCAATGGAAAGTTACTCTTGCGAGACCAGTAAGTTTGAGCATTTTT
TCAATTCCATCTGAAGTAATCTACTGTGTAAAAATAGTACTTGCATGTAT
ATATACAGAAACGCACTGTGTGACCGTCGTTCCTTTCTTTTTCTGTGTAA
CCGTCGTTCCCTCGGGGTCAGCCAGATGCCGTGACCGAAGTATGGGATGA
CGATGCAATAACGACGCAATCATTATCTCCCATCTCGGGCGGGACGTTAC
AGACGGCAGTGTCGAGGTGCATTTGACTTGTCATCTCTAGCCTGGACTTA
CGGGTGTATGTATGTAAATACATACTCAATGCTCTCTGTTTTCGTCCTCC
ATCCTGGTTTTTGCTTCTGCAGATCGGTGTGATTCTGCGTGACTCGAACG
GCATCGCCCAGGTCCGCGCCATCACCGGCTCCAAGATCCTCCGCGTGCTC
AAGGCCAACGGTGAGCATCATAGGGCGTACAGGCCGTAGACCGGCGTGTC
CTGCGAGGGCGAACACTCTATTCCGGAATTGCCAAAAACACATGTAAAAA
CCTTCGTTGCTGCTCATGTTCGCAACTAAAGATATATTGCTAGATGTCGC
GGCTGGAAACGCCAAGTGGGCTGCTGTGCTATCAGTGAAGACAGCCTTCC
ATGTCAGAGGCGAAAAGGAGAAGGCTGACCCCAAGACACAACCATGTTTT
CGGGCAAGACACGCGCTCATGCTAACGGTCCCGCGTCAACTCCAGAGGGA
ATCTGTCCTGCAACACTTGATAGTCGTGACGTAACACAAGTGACTCCCAG
GATTGCTACAGGTCGTCCCCTAGTGCCGTGTACAGCAGTACCCCCCACGG
CCAGAGAGCGTGCGTGGCACGCACTTGCGTCGTGACGCTTCCTCCTCGCT
TTCACACACCCTCAGACGCAAAATCCCCGTTATCCTACACAAAGATGCCT
CTCTATTCGAGCACTCGAATAAATCAGAGATGGTATGTATCACACGGCAT
CGTTAGCGTGCAGCGTCGAAGCAAGGCCTTTGCGTGTTGACGCCCGCATC
CCATTAATAACCCAGCCTTAGCTCCAGTGTTGCTGGCTCAAGGGCGCGTG
TTTCTGCCAGGAAAATGGTGTGTGTATTTGGTGTGGGAGTTCCGTCGTGG
GGCGTGCTGCTGTCGGACAGGAAGGTCGTGCATGGCCTGCCGCCTTCTTG
TCACTTCAGTTGCAAAGCGCGGCTGTCATTGTATTGATACACTGCAGAGC
GTCGCGATTTGCGTGCGATCAGCAGAGCAACGGCTTTGCTTGATTTGTGG
TGTAAAACTACGGCAAGCACGCGGATATTATTTGACACCTCCCTCCCCCC
GCTACTGCTGCATCCGCATCCGCACCGCACCAGGCCTCGCCGCCGAGATC
CCCGAGGACCTTTACATGCTCATCAAGAAGGCCGTGGCGGTGCGCAAGCA
CCTGGAGCGCAACCGCCGCGACAAGGACTCCAAGTTCCGCCTCATTCTCA
TCGAGTCCCGCATCCACCGCCTGTCCCGGTACTACCGCACCAACCGCAAG
CTGGCCGCGAACTGGAAGTACGAGTCCGCCTCGGCGTCCGCCCTCGTGGC
CTAAGCCGAAGCCTACGCCCACGTGCGGCAGGAAGCGTGTTGGCACGTGA
CGCCGTGGTGTCAACGCTTGATGGTCGAGTTGCGTTCTCGGAATGAGGGG
GTCCGAAAGTTGCCGTTGGGGAGGACATTACGTACCGCAAAATATTTCCC
TTGTCCGAAACCCCTTTCGAGGTCTTCAATTTTTGAGAAACGAGGTCGGA
CGCTTGTGTTGAGTCGAGGATCGCCTGGTCCTAGTTTGAATCGCACTTGT
GACTTGGGGAATTCCTGGGGAGGGTGAAGAATTTGTTTTTTCTTCTCTCT
GGCGTATGTAGTGGTGCTTTCTTCTTGCGGTGGCGTTGTGACTTTATTCC
AGTTCTGCAGGGCGGGGAGGAAAAGCGAAGCAAATAAAAGAAGCGAAAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig856:3147..5596-

>mRNA_L-elsbetiae_contig856.17591.1 ID=mRNA_L-elsbetiae_contig856.17591.1|Name=mRNA_L-elsbetiae_contig856.17591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig856:3147..5596- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGCGCATGCACACTGGCGGGAAGGGTATCTCCAAGTCGTCCCTCCC
CTACAAGAGGAGCCCGCCCTCGTGGCTCAAGATCTCCGCCCAGGAGGTGA
CCGAGCACGTGTGCAAGCTGGCCAAGAAGGGCCTCACGCCGTCGCAGATG
GGGCGCATGCACACTGGCGGGAAGGGTATCTCCAAGTCGTCCCTCCCCTA
CAAGAGGAGCCCGCCCTCGTGGCTCAAGATCTCCGCCCAGGAGGTGACCG
AGCACGTGTGCAAGCTGGCCAAGAAGGGCCTCACGCCGTCGCAGATCGGT
GTGATTCTGCGTGACTCGAACGGCATCGCCCAGGTCCGCGCCATCACCGG
CTCCAAGATCCTCCGCGTGCTCAAGGCCAACGATCGGTGTGATTCTGCGT
GACTCGAACGGCATCGCCCAGGTCCGCGCCATCACCGGCTCCAAGATCCT
CCGCGTGCTCAAGGCCAACGGCCTCGCCGCCGAGATCCCCGAGGACCTTT
ACATGCTCATCAAGAAGGCCGTGGCGGTGCGCAAGCACCTGGAGCGCAAC
CGCCGCGACAAGGACTCCAAGTTCCGCCTCATTCTCATCGAGTCCCGCAT
CCACCGCCTGTCCCGGTACTACCGCACCAACCGCAAGCTGGCCGCGAACT
GGAAGTACGAGTCCGCCTCGGCGTCCGCCCTCGTGGCCTAAGCCTCGCCG
CCGAGATCCCCGAGGACCTTTACATGCTCATCAAGAAGGCCGTGGCGGTG
CGCAAGCACCTGGAGCGCAACCGCCGCGACAAGGACTCCAAGTTCCGCCT
CATTCTCATCGAGTCCCGCATCCACCGCCTGTCCCGGTACTACCGCACCA
ACCGCAAGCTGGCCGCGAACTGGAAGTACGAGTCCGCCTCGGCGTCCGCC
CTCGTGGCCTAA
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