mRNA_L-elsbetiae_contig8559.17590.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8559.17590.1
Unique NamemRNA_L-elsbetiae_contig8559.17590.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 2.730e-199
Identity = 297/346 (85.84%), Postives = 319/346 (92.20%), Query Frame = 1 
Query:    4 AEIGECLKREPAPRVGALEDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQ---VMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGE------RAPL 1014
            AEI ECLKREPAPRVGALEDDPEYKLVVASNELIQ+IDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMT V+L+SALPQTTVMVVSVTGSTTSG+PL EEDL EC+KGC+EYEAL  AKASILDFVETRMTSMAPNVCAL+GSRITAQLL LTGGLTAMSKTP CN+Q   VMGQEKKTLSGFSSKAT+S+AGLLY  DVVQLAPPYLR KAL++TA KV LASR DS+ NDP+G +GRQWR+E+EDKIEKWQE+QTAKTKKALPKPDDMPARKRGG+RVR FKQKFAMTDVRKEANRMGFASMADEYSDTAMG D+GMLG+      RAP+
Sbjct:  136 AEIDECLKREPAPRVGALEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIKGCEEYEALAAAKASILDFVETRMTSMAPNVCALIGSRITAQLLGLTGGLTAMSKTPSCNLQEFPVMGQEKKTLSGFSSKATVSHAGLLYQSDVVQLAPPYLRTKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQEMQTAKTKKALPKPDDMPARKRGGRRVRSFKQKFAMTDVRKEANRMGFASMADEYSDTAMGKDYGMLGKSGSGRVRAPM 481
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A7S2XZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL3_9STRA)

HSP 1 Score: 380 bits (977), Expect = 1.770e-125
Identity = 192/319 (60.19%), Postives = 254/319 (79.62%), Query Frame = 1 
Query:   49 GALEDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADE-YSDTAMGLDFGMLGE 1002
            G LED+ EY+L+V SN+LI +ID E++ VHRFV D YS+KFPEL+SL+    DY+R V+ + NEMDMT V+L   L   +VM+VSVTGSTTSG+PL  +DL++CL+G +E + L +AK SIL+FVE+RMT++APN+CAL+GSR+ AQLL L+GGLT +SK P CN+QVMGQEK+ L+G+ + A+L + GL+YHC++VQ APPYLR KALK+TA K+ LA+R+DSF+ D  G +G++ R+ELEDKIEKWQE Q AKTKKALP PD  P +KRGGKRVR++K+KF  T+VRK  NR  FA +  E Y+D AMGL+FG+LG+
Sbjct:   58 GRLEDNEEYQLIVESNQLILDIDEEVINVHRFVCDLYSKKFPELESLLTNRLDYIRVVERIGNEMDMTLVELGDLLAPASVMLVSVTGSTTSGQPLSPQDLDQCLQGAREVQDLEQAKTSILEFVESRMTAIAPNICALIGSRLAAQLLGLSGGLTQLSKIPSCNLQVMGQEKRALAGYGAAASLPHCGLIYHCELVQDAPPYLRSKALKVTAAKLVLAARVDSFQQDMEGALGKKLRTELEDKIEKWQEPQKAKTKKALPAPDSKPKKKRGGKRVRRYKEKFEQTEVRKGLNRRSFAKLDTESYADDAMGLEFGLLGK 376
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA)

HSP 1 Score: 373 bits (957), Expect = 8.930e-122
Identity = 188/320 (58.75%), Postives = 251/320 (78.44%), Query Frame = 1 
Query:   46 VGALEDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKAT-LSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGE 1002
            VG++E DP+Y+L+V SNE I +ID E+V+VHRFVVD YS KFPEL+S++  P DY+RTVQ+M+NEMDMT + L++ LPQT+VMVVSVTGSTT G+ L E +L+  L+GC E+ AL EAK+++L FVE +M+++APN+CA++GSRI AQL+   GGL A+S  P CN+Q MGQE++ L+GF++ AT  ++AGL+++ D+VQ AP YLR K LK+ + KV LA R D    DP   +GR++RSELE K+EKWQE   AK K+ALPKPD+ P  KRGGKRVR+ K+KF +TD++KE N+MGFAS A EY D+AMG DFGMLG+
Sbjct:  106 VGSVEQDPQYQLIVKSNEFIADIDDELVQVHRFVVDAYSPKFPELESIVTDPGDYIRTVQLMKNEMDMTRLPLDTVLPQTSVMVVSVTGSTTPGKALGEAELKRVLEGCAEFTALAEAKSTLLTFVEGKMSAIAPNMCAIIGSRIAAQLMGQAGGLAALSNIPACNLQTMGQERRHLAGFATTATGTAHAGLIFYSDLVQSAPVYLRRKLLKVASAKVTLAVRCDLHNQDPA--VGRRFRSELEAKLEKWQEPDQAKIKRALPKPDEAPKSKRGGKRVRRLKEKFTLTDIQKEQNKMGFASQAYEYGDSAMGRDFGMLGK 423
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA)

HSP 1 Score: 369 bits (946), Expect = 3.060e-120
Identity = 187/332 (56.33%), Postives = 244/332 (73.49%), Query Frame = 1 
Query:   10 IGECLKREPAPRVGALEDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLS-GFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGE 1002
            I   L+R P P  G +E+DPEY+LVV  NEL+Q+ID EMV VH++VVD YS+KFPEL+SL+PQ  DY++ VQ + NEMDMT VDL   LP   V+ VS+TGSTTSG+PL E DL +C++GC+E   L E K   L FVE+RM  +APNVCAL+ + I AQL+ L GGL  MSK P CN+Q++GQ+K+ L  GF+S A + + GL+Y+   VQ APPYLR +ALK+ A KV LA+R+D  + +P+  +GR+ R E++DKI+KWQE   AKTKK+LP PD+ PA+KRGGKR RK K+KF MT++RKE NR  F++   EY D AMGLD GMLG+
Sbjct:   85 INAALERPPQPITGNVEEDPEYQLVVTCNELVQKIDDEMVNVHKYVVDTYSKKFPELESLVPQRLDYMQVVQTIGNEMDMTMVDLSDILPNAVVISVSMTGSTTSGQPLSESDLSQCMQGCREAVELEEDKMKSLTFVESRMNMVAPNVCALIDTIIAAQLMGLAGGLVMMSKIPSCNLQILGQQKQVLGHGFASVAAMPHTGLIYYSTAVQRAPPYLRMRALKLVAAKVALAARMDLHQKEPSDALGRKLREEVDDKIDKWQEPPKAKTKKSLPAPDNRPAKKRGGKRARKHKEKFGMTEMRKETNRRTFSNFEGEYGDDAMGLDLGMLGK 416
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A7S4DKU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKU2_HETAK)

HSP 1 Score: 361 bits (926), Expect = 5.370e-118
Identity = 186/334 (55.69%), Postives = 250/334 (74.85%), Query Frame = 1 
Query:   55 LEDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGERAPLVLADPSETGLLSLS 1056
            LE +PEY+L+V SN+L+Q+ID E++ +HR+V D YS+KFPEL+SL+P   +Y++ VQ + NEMDMT V+L   LP  +VM+VSVTGSTTSG+PLPE DL ECL+G +   AL  AKA +L FVE+RM  +APN+ AL+GSR+ A L+AL GGL A+SK P CN+QVMGQEK+ L+GF + A + + G++Y+ ++VQ  P  LR KALK+TA K  LA+R+DS+++ P+G+ G++ R E+EDKI+KWQE Q  KTKKA PKP+     KRGGKRVRKFK+KFAMTDVRKE  R  FAS+  EY D +MGL+FG+LG++   + A P +     LS
Sbjct:   46 LERNPEYQLIVDSNQLMQDIDDEIINIHRYVCDVYSKKFPELESLLPNKLEYMQVVQRIGNEMDMTEVELSDILPSASVMLVSVTGSTTSGQPLPEADLAECLEGARAALALDAAKAKVLGFVESRMALIAPNLVALLGSRLAAVLMALAGGLLALSKIPCCNLQVMGQEKRALAGFGNAAAMKHTGIIYYSELVQSCPVGLRQKALKVTAAKCALAARVDSYQSAPSGQKGQELRQEIEDKIQKWQEPQEGKTKKARPKPEGGRKSKRGGKRVRKFKEKFAMTDVRKELGRRTFASLDAEYGDDSMGLEFGLLGKKGGRLRAPPKKEKKQKLS 379
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A7S2SGQ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ5_9STRA)

HSP 1 Score: 357 bits (916), Expect = 3.680e-115
Identity = 184/332 (55.42%), Postives = 244/332 (73.49%), Query Frame = 1 
Query:   10 IGECLKREPAPRVGALEDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKK-TLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGE 1002
            I E L+  P+   GA+EDDPEY+L+V+ NELIQ+ID E++ V++FV D Y  KFPEL+SL+P   DYVR VQ + NEMDMT VDL + LP   V+ VS+TGSTTSG+PLPE+DL +C  GC+E   L +AK  IL FVE+RM+ +APN+CA++ + I AQL+ L GGL+AMSK P CN+QV+GQ K   L GF + A L + GL+Y    VQ APPYLR +ALK+ A KV LA+R+D  +++P+G  G + R E++DK+ KWQE Q A+TKKALP PD+ P++KRGGKR RKFK+KF +T+++KE N+  FA+   EY D AMG D GMLG+
Sbjct:  126 IEEALEAPPSAVRGAVEDDPEYQLIVSCNELIQKIDDEILTVYKFVADLYGTKFPELESLVPNRLDYVRVVQAIGNEMDMTMVDLSAILPNALVISVSMTGSTTSGQPLPEKDLLQCNSGCQEALDLEDAKRKILHFVESRMSMVAPNICAVLDTVIAAQLMGLAGGLSAMSKIPACNLQVLGQNKLGNLGGFGAAAALPHTGLIYFTTAVQQAPPYLRMRALKLVAAKVALAARIDLHQSEPSGTAGAKLRVEIDDKVTKWQETQQARTKKALPIPDEKPSKKRGGKRARKFKEKFGLTELQKETNKRTFANFEGEYGDDAMGNDLGMLGK 457
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A024GER9_9STRA (Nop domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GER9_9STRA)

HSP 1 Score: 337 bits (863), Expect = 1.140e-107
Identity = 175/316 (55.38%), Postives = 226/316 (71.52%), Query Frame = 1 
Query:   61 DDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRN--DPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGE 1002
            D  EY LVV SN+L+ +ID E+  +HRF+++ Y+ KFPEL+SL+P   DY R V+ + NE DMT VDL S LP  TVM VSVTGSTTSG+PLP + LE C++ CKE   L + K  IL+FVE+RM  +APNV  LVG+RI AQL+ L GG+  +++ P CN+QV+GQ+KK LSGFSS A L + G+++HCD++Q  PPYLR KA +  A K  L +R+DS +N  DP G++G Q R +L  K+EKWQE   AK+KKALP PD+ P RKRGGKR RK K++  MTDVRKE NR  FA+  +EY D AMGL  G LG+
Sbjct:  106 DSEEYDLVVTSNDLMVQIDDEIAAIHRFLIEMYAPKFPELESLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLPPDALEICMEACKELFDLEKDKIMILEFVESRMRFLAPNVAQLVGTRIAAQLIGLAGGVLELARIPSCNLQVLGQQKKVLSGFSSAAALKHTGIIFHCDLIQNVPPYLRIKACRALAGKTALCARVDSDQNASDPDGQVGAQLRQDLIIKMEKWQEPHKAKSKKALPVPDEKPRRKRGGKRYRKLKERLQMTDVRKELNRRSFATADEEYGDNAMGLTAGRLGQ 421
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: F0WMW8_9STRA (U4/U6 small nuclear ribonucleoprotein Prp31 putativ n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMW8_9STRA)

HSP 1 Score: 336 bits (861), Expect = 2.080e-107
Identity = 174/316 (55.06%), Postives = 227/316 (71.84%), Query Frame = 1 
Query:   61 DDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRN--DPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGE 1002
            D  EY LVV SN+L+ +ID E+  +HRF+V+ Y+ KFPELDSL+P   DY R V+ + NE DMT VDL S LP  TVM VSVTGSTTSG+PL  + LE C++GC+E   L + K  IL+FVE+RM  +APNV  LVG+RI AQL+ L GG+  +S+ P CN+QV+GQ+KK LSGFSS A L + G+++HCD++Q  PPYLR KA +  A K+ L +R+DS +N  DP G++G ++  +L  K+EKWQE   AK+KKALP PD+ P RKRGGKR RK K++  MTDVRKE NR  FA+  +EY D AMG+  G LG+
Sbjct:  103 DSEEYHLVVTSNDLMVQIDDEIAAIHRFLVEMYAPKFPELDSLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLSPDTLEICIEGCRELFDLEKDKVMILEFVESRMRFLAPNVAQLVGTRIAAQLVGLAGGILELSRIPSCNLQVLGQQKKVLSGFSSAAALRHTGIIFHCDLIQNVPPYLRIKACRALAGKLALCARVDSEQNASDPDGQVGARFHQDLVMKMEKWQEPHKAKSKKALPVPDEKPRRKRGGKRYRKLKERLQMTDVRKELNRRSFATADEEYGDNAMGITAGRLGQ 418
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A024U7H9_9STRA (Nop domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7H9_9STRA)

HSP 1 Score: 322 bits (825), Expect = 4.760e-102
Identity = 171/314 (54.46%), Postives = 227/314 (72.29%), Query Frame = 1 
Query:   58 EDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLG 999
            +D PEYKLVVASN+L+ ++D E++ VHRF+V+ Y++KFPEL+SL+P P DY R VQ + NEMDMT VDL S LP  TVM VSVTGSTTSG+PL   DL    + C E   L   K  +L FVE RM  +APN+ AL+G+RITAQL+ L GG+  +S+ P CN+QV+GQ K+ LSG+SS +TL + G+L+ C+++Q  P  LR KA ++ A KV LA+R+DS +   T  +G+Q+  EL++K EKWQ+ Q AKTKKALP+PD+ P RKRGGKR RK K++  +TDVR+E NR  FA+  +EY D AMG+  G LG
Sbjct:  102 QDAPEYKLVVASNDLMVKLDDEIIAVHRFLVEMYAKKFPELESLVPGPLDYARVVQRIGNEMDMTLVDLSSLLPSATVMGVSVTGSTTSGKPLSSSDLAIVEETCTELLELDSDKLLVLRFVENRMNFLAPNLSALLGTRITAQLVGLAGGVDELSRIPSCNIQVLGQRKQVLSGYSSMSTLKHTGILFGCELIQSIPQDLRRKANRVVAGKVALAARVDS-QPHRTATIGQQFYKELQEKFEKWQQPQKAKTKKALPRPDEKPRRKRGGKRYRKVKERTQLTDVRREWNRQTFAASGEEYGDNAMGITVGRLG 414
[Close]
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Match: A0A6G0X9V3_9STRA (Nop domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X9V3_9STRA)

HSP 1 Score: 322 bits (824), Expect = 5.800e-102
Identity = 170/314 (54.14%), Postives = 226/314 (71.97%), Query Frame = 1 
Query:   58 EDDPEYKLVVASNELIQEIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVVSVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAPNVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKATLSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMGRQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLG 999
            +D PEY+L+VASN+L+ ++D E+V VHRF+V+ Y++KFPEL+SL+P P DY R VQ + NEMDMT VDL + LP  TVM VSVTGSTTSG+PL   DL    + C E   L   K  +L FVE+RM  +APN+ AL+G+RITAQL+ L GG+  +S+ P CN+QV+GQ K+ L+G+SS +TL + G+L+ CD++Q  P  LR KA ++ A KV LA+R+DS +   T   G+Q+  EL DK EKWQ+ Q AKTKKALP+PDD P RKRGGKR RK K++  +T+VR+E NR  FA+  +EY D AMG+  G LG
Sbjct:   97 QDGPEYQLIVASNDLMVKMDDEIVAVHRFLVELYAKKFPELESLVPSPLDYARVVQRIGNEMDMTLVDLSTLLPSATVMGVSVTGSTTSGKPLSPSDLAIVQETCTELLELDAEKTLVLRFVESRMNFLAPNLSALLGTRITAQLVGLAGGVDELSRIPSCNIQVLGQRKQVLAGYSSMSTLKHTGILFGCDLIQSIPQDLRKKANRVVAGKVALAARVDS-QPHRTASCGQQFYRELADKFEKWQQPQKAKTKKALPRPDDKPRRKRGGKRYRKMKERTQLTEVRREWNRQNFAASGEEYGDNAMGITTGRLG 409
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8559.17590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q2_9PHAE2.730e-19985.84Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2XZL3_9STRA1.770e-12560.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CKH5_9STRA8.930e-12258.75Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2C7I0_9STRA3.060e-12056.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4DKU2_HETAK5.370e-11855.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SGQ5_9STRA3.680e-11555.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024GER9_9STRA1.140e-10755.38Nop domain-containing protein n=1 Tax=Albugo candi... [more]
F0WMW8_9STRA2.080e-10755.06U4/U6 small nuclear ribonucleoprotein Prp31 putati... [more]
A0A024U7H9_9STRA4.760e-10254.46Nop domain-containing protein n=3 Tax=Aphanomyces ... [more]
A0A6G0X9V3_9STRA5.800e-10254.14Nop domain-containing protein n=5 Tax=Aphanomyces ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8559contigL-elsbetiae_contig8559:1040..7857 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score584.3
Seed ortholog evalue4.7e-164
Seed eggNOG ortholog2880.D8LKU3
Preferred namePRPF31
KEGG koko:K12844
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0001654,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005687,GO:0005690,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006325,GO:0006342,GO:0006346,GO:0006355,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0008380,GO:0009266,GO:0009409,GO:0009628,GO:0009791,GO:0009845,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016569,GO:0016604,GO:0016607,GO:0017069,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030621,GO:0030622,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034708,GO:0035097,GO:0040029,GO:0043010,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0044877,GO:0045292,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046540,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051716,GO:0060041,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070417,GO:0070990,GO:0071005,GO:0071011,GO:0071166,GO:0071339,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090351,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.spliceosomal tri-snRNP complex assembly
EggNOG OGsCOG1498@1,KOG2574@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons7
Model size1347
Cds size1347
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816938.0926692-CDS-L-elsbetiae_contig8559:1039..11471622816938.0926692-CDS-L-elsbetiae_contig8559:1039..1147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 1040..1147 +
1691683926.453176-CDS-L-elsbetiae_contig8559:1039..11471691683926.453176-CDS-L-elsbetiae_contig8559:1039..1147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 1040..1147 +
1622816938.104336-CDS-L-elsbetiae_contig8559:2254..23891622816938.104336-CDS-L-elsbetiae_contig8559:2254..2389Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 2255..2389 +
1691683926.467271-CDS-L-elsbetiae_contig8559:2254..23891691683926.467271-CDS-L-elsbetiae_contig8559:2254..2389Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 2255..2389 +
1622816938.1185825-CDS-L-elsbetiae_contig8559:3098..32211622816938.1185825-CDS-L-elsbetiae_contig8559:3098..3221Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 3099..3221 +
1691683926.477757-CDS-L-elsbetiae_contig8559:3098..32211691683926.477757-CDS-L-elsbetiae_contig8559:3098..3221Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 3099..3221 +
1622816938.1285725-CDS-L-elsbetiae_contig8559:4117..43001622816938.1285725-CDS-L-elsbetiae_contig8559:4117..4300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 4118..4300 +
1691683926.4885106-CDS-L-elsbetiae_contig8559:4117..43001691683926.4885106-CDS-L-elsbetiae_contig8559:4117..4300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 4118..4300 +
1622816938.1427858-CDS-L-elsbetiae_contig8559:5913..60571622816938.1427858-CDS-L-elsbetiae_contig8559:5913..6057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 5914..6057 +
1691683926.5008721-CDS-L-elsbetiae_contig8559:5913..60571691683926.5008721-CDS-L-elsbetiae_contig8559:5913..6057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 5914..6057 +
1622816938.15446-CDS-L-elsbetiae_contig8559:6746..69251622816938.15446-CDS-L-elsbetiae_contig8559:6746..6925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 6747..6925 +
1691683926.5096061-CDS-L-elsbetiae_contig8559:6746..69251691683926.5096061-CDS-L-elsbetiae_contig8559:6746..6925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 6747..6925 +
1622816938.164574-CDS-L-elsbetiae_contig8559:7382..78571622816938.164574-CDS-L-elsbetiae_contig8559:7382..7857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 7383..7857 +
1691683926.5181208-CDS-L-elsbetiae_contig8559:7382..78571691683926.5181208-CDS-L-elsbetiae_contig8559:7382..7857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8559 7383..7857 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8559.17590.1prot_L-elsbetiae_contig8559.17590.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8559 1040..7857 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8559.17590.1

>prot_L-elsbetiae_contig8559.17590.1 ID=prot_L-elsbetiae_contig8559.17590.1|Name=mRNA_L-elsbetiae_contig8559.17590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=449bp
QAEIGECLKREPAPRVGALEDDPEYKLVVASNELIQEIDPEMVEVHRFVV
DRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTHVDLESALPQTTVMVV
SVTGSTTSGRPLPEEDLEECLKGCKEYEALVEAKASILDFVETRMTSMAP
NVCALVGSRITAQLLALTGGLTAMSKTPPCNMQVMGQEKKTLSGFSSKAT
LSNAGLLYHCDVVQLAPPYLRPKALKITAYKVGLASRLDSFRNDPTGKMG
RQWRSELEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKQKFA
MTDVRKEANRMGFASMADEYSDTAMGLDFGMLGERAPLVLADPSETGLLS
LSLPSSFVSFFYSLAACWVSASPLAGPCETTVLSPIVSCLSVWISLACLS
LACLSRTLGRPASFHTIDLILCRAFTGKSSCFLTLGPPCPRTTPSPIR*
back to top

mRNA from alignment at L-elsbetiae_contig8559:1040..7857+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8559.17590.1 ID=mRNA_L-elsbetiae_contig8559.17590.1|Name=mRNA_L-elsbetiae_contig8559.17590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6818bp|location=Sequence derived from alignment at L-elsbetiae_contig8559:1040..7857+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGGAGATTGGCGAATGCCTGAAGCGAGAGCCTGCTCCGAGGGTGGG
GGCCCTGGAGGACGACCCCGAGTATAAGCTAGTCGTCGCCAGCAATGAGC
TCATACAGGTAAGGAGCGAGTCGAGAGCTCCCCACATGCATACCCTTTTG
GGGGATAGGAACAGAAGAATGAAAAAAAGGGTGGACGGGCCGCCTTTATT
TTGGCTCTTCTTTGTGGGGCGACGCAAGGAGGAGGGGGGGGGGGGGGGGG
GGGTTTTTTTTTGTTTGGGGGGGGTTTTGGGGTTATGGACGGGGGGGAAA
GGGAGGGGGGGGGGGGGGAAAAAAAAAAAAGGAGGGGGGGGGGGGCGGTT
CGTTTTTTTTGTTGCTTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGCGTGTATTTTTTTGTAGTGCGTGGTCTTGTTGTGTACGTAC
GTGAGCGAACGTGAGGGAGGAGCGGAGGAAAAAACGAAAGAGAGGTCGGG
AAAGCGCGGAGAGACCGTACAAACCGTGGAGGGTCGTCATGAACACGGTG
GTGTACTACAGTAGTAGTACGTAAATACTGTTGCTCCCGAACAACGAGCT
TGTGCAGCAGCAGTGGCACAGGGATTAGAGAGGCGGGAGGGGGGAGGGGG
GGGGGGTTAGGTGTGTAAGAGTGAAGAGGAACATAAGGTTTGTGCTCGGC
AGCAAAGAAGGAAGGTAAAGGATACCAGCGGTTCGAAGTCGGCCTGTTAG
GGACGGGGCGGGGCGGACGGCGTGGATGCCGATCACCCTGAGTTTGCCTG
GGCTTTGCTACGAGCTCAGCCACCGCAAAGCCGTCGATCCACTCCCCACG
CTGACCCTGCCACCACCACCACCACCCCCAGCTCTGCAAAATGGCAGGCA
GTCTCAGCCCGGCCTGGAAAGACGTGCTTGCCACCATGCAGCTCACATCT
CCCACACTGCTGCCCACGGGACATGTCCATATATGATATCATGGGTGGGA
ATATGTTTATTTTATTTTAAGGAGCGTGCCCGTCAAAACGCTGCTGCTGC
TGCTGCTGCTACTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCTG
CTGTGTCGGTCTCTCGCCGGCTCGTCTGTGCCTGATCTGGACCCGTACGA
TGTGTCCAACTGGTTTCTTCTCGAAAACGATCGAAAATCGCTCTCTCTTG
TTGTATATACCGCAGGAGATAGACCCGGAGATGGTGGAGGTGCACCGCTT
CGTGGTGGACAGGTACTCGCAAAAGTTTCCCGAGCTGGACAGCCTGATCC
CTCAGCCGGCAGACTATGTCCGGACCGTGCAGGTCATGAGGAACGAGATG
GTGAGCGACGAGTCTTTTTTTTTTTTCTTCTTCACATTAATTTCCAGTGC
TCGATGGGCTCCCTGTCACGAGGATATCTTGCCAGAGTGAGAGTACTGAA
CCGTGGTCACACAGAAGGGTTCCTTTCCCCGAGGCCCCCACTTCCCCCGT
CTGCGGTGCTTGCCTACTATTTTTGTCGCGAGAAGGGTTCAGCCGTCCCT
TTCCGTCGTCGACGGTGAGGTCGAAGTTACGTGACGAGTGGTTGCTGGAA
AGTGATGAGAGTTCTTTGTGATGTGGTGAAAAAGAGAGTATGGCTTGGTA
GAGACTTGCAGGGGAGGTGATGAATTCTTCCTATATGTTGGGTGTTTTTC
CACTCGACCGGCCCAATATTACGTTACTATATGGAATACCGATTGAATCT
CACGGAATCCCGTCTCAATGTGGGTTAGGTTCCACTTAGATTGATGTTTT
TCTTTCAAAGAGAGAGACAGAGAGTGTCACAGAGAAAGAGATTTGTGTCC
ACAGCTTTGGGTAGTTTCGGTGGCTGGCGTTTGTGAGGAACCAAGCACCC
GGAGTGAAAAAGACGAGGCAAGGGACCAGCTCTTTTGACAGCCGTGTTAA
CCGCCCCGGTGCCTCAGCCGGCTTCGGAGGCGTACATACCTGGCCAATGA
ATAACCGCACCTGCTATGACTGTCTGCCGTCTACATACCTGCGTTCGTCT
GTCTTGTAGGACATGACGCACGTGGATCTGGAGTCGGCGCTGCCGCAGAC
GACGGTGATGGTCGTTAGCGTGACCGGCTCCACCACGAGCGGCCGACCGC
TGCCGGAGGAGGACCTGGAGGAGTGCCTCAAGGTGGGAAGGATCGCGCGT
TGTTGATCATCTTGTTGCTGCTACATACGTCGTGTTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAGGCTGTCGCTTTG
GCTGCTGCTGCTGTTGGTGGTGGTTTGCGATGTTGCGGCTGTTATTGTTG
TTGATGATTCCTTGTTGCCGCTGTTGTTGTTGTTGGTGGTGGTGGTGGTG
GTGGTTGTGGCTGGTGGTGTTGTTCCTGTGTGTTACTGCCGAAGCGTGTC
GCCCGTAGGCCGCACAAGGCACAGAGATAGTGTGGCTCGCTTCCCAGCCA
GGCGCTTGAATGCTTTATATACAAAAAACCGTGTTCGTGTCCGGGCGCGG
CGCGGAAAGAGTGCAAGCTTGAGTTTCCTCTGTATCGGACGCTTCAACCC
CACTCTTCTTATTTTTCTCTTCATCCGTCTTCCGACGGCAGCCCGGCGAG
ACCCTCGACTCTCTTGCTCAACAACAGCACCGCCAAACCGCGACCTTTCT
TTTTGTCAGGGATGTATGGAGGACGAGGCGCTGTTTTTTTTTTGCGCTTG
CTATTTTTACGCATCATGTAGACGCCCCTACTCGAACCCACAACTCGGGC
AGTGGCTTATTTCCTTTCGTGGTATGTGGCGAGGTTAGCCAAGCTCAACC
GAGTCGTCTCGGCTTTAAGCTGGTTTCGAGAGTGGGCCTCTTTCGTTGAC
ATGCCATCTTGGACATATCAAACCGAGACTCTTTAGGTCTGTATGTGCGT
ACGTACTTTTGACAGGAAAGATCCATATCTAGGTATCCATAGTCACAATT
TATTTTAATGTGCAGACAACAACGACAACAACAACAATAATGAACAGCCT
CGCCAAACCGCGACCTTTTTTTTGCCAGGGGTGCAAGGAGTACGAGGCGC
TGGTGGAGGCGAAAGCCTCCATCCTGGACTTCGTTGAGACGAGGATGACG
AGCATGGCGCCGAACGTGTGCGCTCTTGTGGGCAGCCGCATCACGGCCCA
GCTGCTGGCGCTCACGGGAGGGCTGACGGCCATGTCCAAGACTCCGCCCT
GTAACATGCAGGTGGGCTTTCGTGTTTGGTTCTTGCGTGCGTGCGTGCGT
GCGTGCATGCATGCGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGCTTCC
GTTCTTGGCATCAACGTCCACATGAACTTGGCATCAACGTCCACATCAAC
ATCGACTTGGATTTCACGAGCTTGATGCCCTGTGAAAAATGATCTATTTA
GGTGTCTACCTCAGTTGACTAGTGTTAGCGGGCCAAAAACGAACTTGGTG
TGTGTGCGCTTTCGTGTGTCTATTTATGCATTTCGCGCGGGTCTTGGCTG
TGTTACTGGTGTGTTTTGTGTTGTGTTGTTGTGTTATGTTTTGTTTGTTG
TTTGGCGTCGACCGCGCTGATCAACTCAAAAGTAGGTACGTCAGTCTCGG
CGGGGGAAGCAGCTGCGCTGCACCATACTTGCACCATACTTGTACCAGCC
TGCACCCACCGGAGGAGTGACTTTTTTTGTCAGGGGTTATGCTGTGTTTG
TTGTTTGTTTGCTTGTTTGTATTCTCGACCTGCTTCGTGTCTTGTCCGAG
GGTATTTTATTTTATTTTTATTACTTTTTGTATCCCCTGTTGGTGGGCGG
TATAGAAAAGGGTTATACCAAACCTGTGCGGGCCTGTACATATGTAGACC
TGTGCGGGCCTGTACATATGTAGACCTGTGCGGGCCTGGCCGGCGAGAAC
CCGGCGCGGAGCCCCCCGGCTTTGTTGGGGTACCAAGATAGCGGTGTAAG
CTGTTCCAGTTTTGTTTTACCTCACATCGCGTGTAGAGGGGAGCGAAGGG
CTCCAGATTCGATATCTTGTTTATCTGTTTATTATTGCTTTGCTGGTCCT
TTGGGTCCATTTTATTTTTCGTGTACCTTTTCTTGGGTATAAGTTAGCCT
GTGAGGTACTGGATGGAGAGATCGGAACGGTTTTTAATGTGAAGACAACA
TACATATATACATACATACATATATACATACATACATACTCGGCAGGTTC
TGGTGCCGTGTGAGACAAAACGAAAACGGCGTTGTAGGGAGATTTTGCCG
GCTTTTTTTCGTCACCGTCGCGTGCGGTCGTTTTTCGATGGAATTATAAT
GAATACACAGGGGCAGACAAGTAGTGGTGCGTGCCCTTTGTTTCCGTGCG
CTCGTTGGCGTCGAGCCTATTTCGCCATCTTACTGCTGTGAGTGCCCTTT
GCTTCCGTGCGCTTGCTGACGGCCAAGTCTATTTCGCGATGTTACTGCTG
CCCCCCCCTCGTTTTCCGTGCGCTCGTTGTTGACACCAAGCCTAGTTCAC
GTTCGTTGACACCAAGTCTATTTCGCTATTTCGCCATCTCACTGTGGCGT
GCCCTTTGTTTTCCGTGCGCTGTTGACACCAAAAGCCTATTTCACCACAC
GAAGCCTATTTCGCGATGTTACTACTGTGGCGTGTGCTTTGTTTTCTCTG
GGCTTTTTGACACCAAGCCTATTTCACCGCTCGTCGACACCAAGCCTATT
TCGCGATGTTACTGCTGTGGCGTGCCCTTTGTTTTCCGTGGGCTTGTTGA
CACCAAGCCTATTTCACCATCCCACTGCTGGCCCCCCTTGTTTTCTGCCC
TCGGTGGTGGATCATGGAGTGCAGGTGATGGGCCAGGAGAAGAAGACGCT
GAGCGGTTTCTCCTCCAAGGCCACGTTATCCAACGCCGGCCTGCTCTACC
ACTGTGATGTTGTGCAGCTAGCGCCTCCATACCTGCGGCCTAAGGCCCTG
AAAATTACCGCGTACAAGGTACTCGTCGCTCTCGACCGCCCTGCTCTCTA
TATTGCTGCGTGATAGGTGTCAGCCACTCTCTCTTACGGGTTGGGAGTGG
TTGGTGGTTAAAAGTAGTTGTTGGGTACCATATGTTTTAATCGTTCGCTT
TTTTGTTCGCTTTTAGTCTGTCACAGTAGCTCAATATTTATGGTGTCGCA
TCATCAACGCGTCGTGTTCGTTTCAGCAGCGAAACGTGTCGAGGTATAGA
AGTATATATACATACTTGGAGGCCGAAATTTCGTTGCGATGAATTGATAA
CACCAATCATGCCGCGGGGGCACCTACCGTATCGGTTATAACCGTGGTTT
GCCTATATTGTAGCGTACCCGTATATAAGGCGGATCGATGCGGACCCATA
TCTACCATGCCGTACGCCAGGTGTCACTCATGTCGTCGCTCGCTCTGTAT
GTGTGTATCATGGTAACGTGCCTGTCGTGGTCTCATCCCTCGTACACACT
TGTAGCCATAATATCTTGCAGAGGTCCGTCGGAACCTTTGCTACAGCAAT
ATCAGCAACATCTTTGTCGAGCAGAGGTATTTTCTACGCCGTAGACTAAA
CTCCTCCCCAACGCCATCGATACACACATACCATGCCCACGACATCTTCG
CGAATTTGTCACGTTCGCCGCGAAAATAATATGCCGTGGCGTGCGGGGGG
TGACCAGGTGGGCTTGGCCTCCAGGCTCGACAGCTTCAGAAACGACCCCA
CGGGGAAGATGGGGCGGCAGTGGAGGTCCGAGTTGGAGGACAAGATCGAG
AAGTGGCAGGAGCTGCAGACGGCGAAGACCAAGAAGGCGTTGCCCAAGCC
CGACGACATGCCCGCGAGAAAACGCGGCGGCAAGAGGTATTGTACATCAT
ATGTTTGTATATGTATATGTGTATGTACGCTGTTGACGGGGATATGGTGG
AATCCTGTTTTTTTTTGTTTTTTTTTCAGCTGCTGTTGAATTTTTGGTGC
ATAATTTTCACATATCAATCAGGAGGTGTTTCGGAATCAGCTCCCGACAG
CTGCTGCGGTGCCCCCCGGCTTGCGAAACCGGTCCAGCTGGTGGGTAAAG
CACGTTTTGCACCCGCCCTCAGCCAGAATTAACCCAGGCGCAGGCCGATC
GACACCGCAAGCATAGATGCCACTTACACGCGAAGAACCCACCACACGCG
CAGCACTCGTGCTACAATACACGCATAGTCTACGCCGAATTTTCCTGGAA
TTTTCCTGGAATTTTCCTGGAATTTTCCTGCCCTCAACGCCGGAATCGTT
GTGCTTCGTGCCTGCCCTCCTCGTCCGCCTTTGCGGCTGTCAGGGTGCGA
AAGTTCAAGCAGAAGTTCGCTATGACCGACGTCCGGAAAGAGGCCAACCG
AATGGGCTTCGCCTCCATGGCCGACGAGTACAGCGACACCGCCATGGGAC
TGGACTTCGGCATGCTGGGTGAGCGAGCCCCGCTGGTCTTGGCTGATCCC
TCTGAAACTGGTCTCCTCTCTCTCTCTCTCCCCTCGTCTTTTGTGTCTTT
TTTCTATTCTCTCGCGGCATGCTGGGTGAGCGCGAGCCCGCTGGCTGGTC
CCTGTGAAACCACTGTCCTCTCTCCGATCGTCTCTTGTCTCTCCGTATGG
ATCTCCCTCGCTTGTCTCTCCCTCGCTTGTCTCTCCCGTACCCTTGGTCG
CCCCGCCTCATTTCATACCATAGACTTGATATTGTGTCGTGCTTTTACTG
GCAAATCCAGCTGTTTCCTCACCCTCGGTCCACCCTGTCCGAGGACTACC
CCCTCCCCCATCCGCTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig8559:1040..7857+

>mRNA_L-elsbetiae_contig8559.17590.1 ID=mRNA_L-elsbetiae_contig8559.17590.1|Name=mRNA_L-elsbetiae_contig8559.17590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2694bp|location=Sequence derived from alignment at L-elsbetiae_contig8559:1040..7857+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGGAGATTGGCGAATGCCTGAAGCGAGAGCCTGCTCCGAGGGTGGG
GGCCCTGGAGGACGACCCCGAGTATAAGCTAGTCGTCGCCAGCAATGAGC
TCATACAGCAGGCGGAGATTGGCGAATGCCTGAAGCGAGAGCCTGCTCCG
AGGGTGGGGGCCCTGGAGGACGACCCCGAGTATAAGCTAGTCGTCGCCAG
CAATGAGCTCATACAGGAGATAGACCCGGAGATGGTGGAGGTGCACCGCT
TCGTGGTGGACAGGTACTCGCAAAAGTTTCCCGAGCTGGACAGCCTGATC
CCTCAGCCGGCAGACTATGTCCGGACCGTGCAGGTCATGAGGAACGAGAT
GGAGATAGACCCGGAGATGGTGGAGGTGCACCGCTTCGTGGTGGACAGGT
ACTCGCAAAAGTTTCCCGAGCTGGACAGCCTGATCCCTCAGCCGGCAGAC
TATGTCCGGACCGTGCAGGTCATGAGGAACGAGATGGACATGACGCACGT
GGATCTGGAGTCGGCGCTGCCGCAGACGACGGTGATGGTCGTTAGCGTGA
CCGGCTCCACCACGAGCGGCCGACCGCTGCCGGAGGAGGACCTGGAGGAG
TGCCTCAAGGACATGACGCACGTGGATCTGGAGTCGGCGCTGCCGCAGAC
GACGGTGATGGTCGTTAGCGTGACCGGCTCCACCACGAGCGGCCGACCGC
TGCCGGAGGAGGACCTGGAGGAGTGCCTCAAGGGGTGCAAGGAGTACGAG
GCGCTGGTGGAGGCGAAAGCCTCCATCCTGGACTTCGTTGAGACGAGGAT
GACGAGCATGGCGCCGAACGTGTGCGCTCTTGTGGGCAGCCGCATCACGG
CCCAGCTGCTGGCGCTCACGGGAGGGCTGACGGCCATGTCCAAGACTCCG
CCCTGTAACATGCAGGGGTGCAAGGAGTACGAGGCGCTGGTGGAGGCGAA
AGCCTCCATCCTGGACTTCGTTGAGACGAGGATGACGAGCATGGCGCCGA
ACGTGTGCGCTCTTGTGGGCAGCCGCATCACGGCCCAGCTGCTGGCGCTC
ACGGGAGGGCTGACGGCCATGTCCAAGACTCCGCCCTGTAACATGCAGGT
GATGGGCCAGGAGAAGAAGACGCTGAGCGGTTTCTCCTCCAAGGCCACGT
TATCCAACGCCGGCCTGCTCTACCACTGTGATGTTGTGCAGCTAGCGCCT
CCATACCTGCGGCCTAAGGCCCTGAAAATTACCGCGTACAAGGTGATGGG
CCAGGAGAAGAAGACGCTGAGCGGTTTCTCCTCCAAGGCCACGTTATCCA
ACGCCGGCCTGCTCTACCACTGTGATGTTGTGCAGCTAGCGCCTCCATAC
CTGCGGCCTAAGGCCCTGAAAATTACCGCGTACAAGGTGGGCTTGGCCTC
CAGGCTCGACAGCTTCAGAAACGACCCCACGGGGAAGATGGGGCGGCAGT
GGAGGTCCGAGTTGGAGGACAAGATCGAGAAGTGGCAGGAGCTGCAGACG
GCGAAGACCAAGAAGGCGTTGCCCAAGCCCGACGACATGCCCGCGAGAAA
ACGCGGCGGCAAGAGGTGGGCTTGGCCTCCAGGCTCGACAGCTTCAGAAA
CGACCCCACGGGGAAGATGGGGCGGCAGTGGAGGTCCGAGTTGGAGGACA
AGATCGAGAAGTGGCAGGAGCTGCAGACGGCGAAGACCAAGAAGGCGTTG
CCCAAGCCCGACGACATGCCCGCGAGAAAACGCGGCGGCAAGAGGGTGCG
AAAGTTCAAGCAGAAGTTCGCTATGACCGACGTCCGGAAAGAGGCCAACC
GAATGGGCTTCGCCTCCATGGCCGACGAGTACAGCGACACCGCCATGGGA
CTGGACTTCGGCATGCTGGGTGAGCGAGCCCCGCTGGTCTTGGCTGATCC
CTCTGAAACTGGTCTCCTCTCTCTCTCTCTCCCCTCGTCTTTTGTGTCTT
TTTTCTATTCTCTCGCGGCATGCTGGGTGAGCGCGAGCCCGCTGGCTGGT
CCCTGTGAAACCACTGTCCTCTCTCCGATCGTCTCTTGTCTCTCCGTATG
GATCTCCCTCGCTTGTCTCTCCCTCGCTTGTCTCTCCCGTACCCTTGGTC
GCCCCGCCTCATTTCATACCATAGACTTGATATTGTGTCGTGCTTTTACT
GGCAAATCCAGCTGTTTCCTCACCCTCGGTCCACCCTGTCCGAGGACTAC
CCCCTCCCCCATCCGCTAGGGTGCGAAAGTTCAAGCAGAAGTTCGCTATG
ACCGACGTCCGGAAAGAGGCCAACCGAATGGGCTTCGCCTCCATGGCCGA
CGAGTACAGCGACACCGCCATGGGACTGGACTTCGGCATGCTGGGTGAGC
GAGCCCCGCTGGTCTTGGCTGATCCCTCTGAAACTGGTCTCCTCTCTCTC
TCTCTCCCCTCGTCTTTTGTGTCTTTTTTCTATTCTCTCGCGGCATGCTG
GGTGAGCGCGAGCCCGCTGGCTGGTCCCTGTGAAACCACTGTCCTCTCTC
CGATCGTCTCTTGTCTCTCCGTATGGATCTCCCTCGCTTGTCTCTCCCTC
GCTTGTCTCTCCCGTACCCTTGGTCGCCCCGCCTCATTTCATACCATAGA
CTTGATATTGTGTCGTGCTTTTACTGGCAAATCCAGCTGTTTCCTCACCC
TCGGTCCACCCTGTCCGAGGACTACCCCCTCCCCCATCCGCTAG
back to top