mRNA_L-elsbetiae_contig8542.17576.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A6H5KV09_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV09_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 7.490e-167 Identity = 228/297 (76.77%), Postives = 262/297 (88.22%), Query Frame = 1 Query: 1 GLRVTARSILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTNDMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVYDISTDVPEAEPFLGLPACLPGTIQAEAFDTGGLGLGYGESDPE 891 G+ R ++W+D+FDGD+LD VW + +GNGCDQGDGLCGWGN+EQQTYT DNH+VQDG+L+ITAD+V E VDERFYTSSR+RS+ PVA+LTGRIE+RIQ+PAG GLW AFWMLP++TSRG WAATGEIDIMES NDMDTILGTIHYGGE+P N AGC S+QLG GLDYS DYHVYAVEWEQDEMRWYVD QLFCQRTKWTS++ S PY+APFD EFE++LNLAVGG+LPGR+VDD PATMLVDY+RVYDI+TDV EAEPFLG P CLPGTIQAEA+DTGGLGLG+G+S PE Sbjct: 14 GMIPAERVLVWEDNFDGDSLDEAVWALNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQDGLLWITADKVDEAVDERFYTSSRVRSIPPVAFLTGRIESRIQVPAGLGLWAAFWMLPSDTSRGGWAATGEIDIMESVNDMDTILGTIHYGGEWPMNLHAGCVSSQLGTGLDYSSDYHVYAVEWEQDEMRWYVDDQLFCQRTKWTSNVTSNEPYQAPFDAEFEIILNLAVGGSLPGRVVDDGALPATMLVDYVRVYDITTDVAEAEPFLGAPLCLPGTIQAEAYDTGGLGLGFGDSYPE 310
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A7Y2U344_9GAMM (Glycoside hydrolase family 16 protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2U344_9GAMM) HSP 1 Score: 246 bits (629), Expect = 3.890e-77 Identity = 128/253 (50.59%), Postives = 165/253 (65.22%), Query Frame = 1 Query: 16 ARSILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTN----DMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVY 762 A ++W D+FDG LDPEVW ESG+G G + GWGN+E Q Y D+ ++ +GVL ITA + E + + YTS+RI + A+ GRIEARI+LP GQGLW AFW+LP + + G WAA+GEID+ME+ N +T+ GT+HYGGE+P N F G G D + D+HVYA+EW+ EMRWYVDG L+ + W S + APY APFD F +LLN+AVGG PG T FP TM VDY+RVY Sbjct: 70 ALMLVWNDEFDGTQLDPEVWFFESGDGSQYG--IPGWGNNELQWYLPDSAQLDNGVLVITARQ--ESQNGKDYTSARINTRDRFAFAYGRIEARIRLPGGQGLWPAFWLLPQDFAYGGWAASGEIDVMEAVNLGGAGGNTVHGTLHYGGEWPNNVFTG---ESYGVPTDATTDFHVYALEWDATEMRWYVDGVLYAMQNAWYS---TSAPYPAPFDQPFYILLNVAVGGNFPGAPDAGTEFPVTMEVDYVRVY 312
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A6M8W1P8_9BACT (Glycoside hydrolase family 16 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8W1P8_9BACT) HSP 1 Score: 246 bits (627), Expect = 1.570e-76 Identity = 143/289 (49.48%), Postives = 175/289 (60.55%), Query Frame = 1 Query: 22 SILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYT--LDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTNDMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTK--WTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVYDISTDVPEAEPFLGLPACLPGTIQAEAFDTGGLGLGYG 876 +++WQD+FDG LDPE W G+G G GWGN+E Q YT +N RVQ+G L ITA E + YTS+R+RS + GR EARI++P GQGLW AFWMLPT++ G WAA GEIDIME+ N GTIH+GG++P NR G GLD S YH YA+EWE D++RWYVDG+LF + W S+ A RAPFD F +LLN+AVGG PG D T FP TM +D++RV E PF G P +PG IQAE FD GG G G Sbjct: 28 TVVWQDEFDGSALDPEHWEFMIGDGTAYGL-PSGWGNNELQYYTDRPENARVQNGKLTITARE--ENYAGKRYTSARLRSRGLADFRYGRFEARIRVPRGQGLWPAFWMLPTDSPYGGWAAGGEIDIMETVNVPLESHGTIHHGGQWPNNRSNG---NSFSNGLDLSLQYHTYAMEWEPDQLRWYVDGELFHSLSSGAWFSENAPDND-RAPFDVYFHMLLNVAVGGNWPGPPDDTTQFPQTMEIDWVRV-----SAREQSPFGGEPHPVPGLIQAEDFDEGGARAGLG 304
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A3A0CNL3_9BACT (Carbohydrate-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0CNL3_9BACT) HSP 1 Score: 249 bits (637), Expect = 3.790e-76 Identity = 133/295 (45.08%), Postives = 181/295 (61.36%), Query Frame = 1 Query: 16 ARSILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTL--DNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTNDMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQR--TKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVYDISTDVPEAEPFLGLPACLPGTIQAEAFDTGGLGLGYGESDP 888 A +++W D+FDG +++P W G+G D G + GWGN+E Q YT +N V +G L I A + E R YTS+R+R+++ + GR+EARI+LP+ QG+W AFWMLPTN+ G WAA+GEIDIMES N TI G+IH+GG++P N C + G +YS D+H +++EW +RWYVD +C R +W SD A APFD F LLN+AVGG PG ++FP M VD++RVY DV EP+ G P +PG I+AE +D GG L Y + DP Sbjct: 25 ADTLVWSDEFDGTSVNPANWEFMIGDGSDYG--IPGWGNNELQYYTARPENAVVSNGTLKIIARQ--ENYGGRNYTSARLRTMNRAEFQYGRMEARIKLPSTQGIWPAFWMLPTNSPYGGWAASGEIDIMESVNIATTIYGSIHFGGQWPNNTHLTCTRSN---GTNYSLDFHTFSLEWTPTYLRWYVDDVAYCTRGSNQWYSDAAP-GDDNAPFDHPFHFLLNVAVGGNFPGSPNGSSVFPQVMEVDWVRVYQ---DVASQEPYGGTPWPIPGQIEAEDYDDGGPALAYFDCDP 308
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: UPI001C992DE8 (glycoside hydrolase family 16 protein n=1 Tax=Ferrimonas balearica TaxID=44012 RepID=UPI001C992DE8) HSP 1 Score: 241 bits (616), Expect = 9.870e-76 Identity = 130/250 (52.00%), Postives = 158/250 (63.20%), Query Frame = 1 Query: 25 ILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTN----DMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVY 762 ++W D+FDG LD W + G+GCD LCGWGN E+Q Y +N V DG+L ITA R E Y+S RIRS+ + GRIEARIQLPAGQGLW AFWMLP+ G WAA+GEIDIME+ N + + GT+HYGG +P NR++G A P + VY V+W Q E+RWYVD L+ +T+W S + APY APFD F LLLNLAVGGT PG DT FPA M VDY+RVY Sbjct: 27 LVWSDEFDGTALDTSKWTPQLGDGCDLN--LCGWGNQERQFYQAENLTVADGLLTITAHR--GGPGEAEYSSGRIRSLHNGDFRYGRIEARIQLPAGQGLWPAFWMLPSEEVYGGWAASGEIDIMEAVNLGGRGGNEVHGTLHYGGPWPDNRYSG---APHTPAESVVTGFRVYRVDWTQGEIRWYVDDVLYQTQTQWHS---TAAPYPAPFDQPFHLLLNLAVGGTWPGAPAPDTPFPAQMRVDYVRVY 266
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: UPI0013ED0B97 (glycoside hydrolase family 16 protein n=1 Tax=Thioalkalivibrio sp. XN8 TaxID=2712863 RepID=UPI0013ED0B97) HSP 1 Score: 242 bits (617), Expect = 2.590e-75 Identity = 127/254 (50.00%), Postives = 162/254 (63.78%), Query Frame = 1 Query: 25 ILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTN----DMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVYDIST 774 ++W D+FDGD LDP+VW E+G+G G + GWGN+E+Q Y DN ++ DGVL ITA R EQ+ YTS+RI + A+ GR EAR++LP GQGLW AFWML ++ G WAA+GEIDIME N + I GTIHYGGEFP N +G D + D+HVYAVEW+ E+RWYVD L+ R W+S + AP+ APFD F L+ N+AVGG PG +T FP TM VD++RVY T Sbjct: 74 LVWSDEFDGDRLDPDVWFFETGDGSQYG--IPGWGNNERQFYLPDNAQLDDGVLQITARR--EQIGAFRYTSARINTRDRFAFRYGRFEARMRLPGGQGLWPAFWMLAQDSPYGTWAASGEIDIMEGVNLGAAGGNRIYGTIHYGGEFPNNLESG---ESYVVATDVTTDFHVYAVEWDPTEIRWYVDDVLYAVRNSWSS---TAAPFPAPFDQPFYLIFNVAVGGNFPGAPDPNTEFPVTMEVDWVRVYSGET 317
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A1M5YU54_9GAMM (Beta-glucanase, GH16 family n=2 Tax=Ferrimonas marina TaxID=299255 RepID=A0A1M5YU54_9GAMM) HSP 1 Score: 241 bits (614), Expect = 3.080e-75 Identity = 125/250 (50.00%), Postives = 158/250 (63.20%), Query Frame = 1 Query: 25 ILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTN----DMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVY 762 ++W ++F+G LD W + G+GCD LCGWGN+E Q Y DN V DG+L ITA + + YTS RIRS++ + GRIEARI+LPAGQGLW AFWMLPT+ G WAA+GEIDIME+ N + + GT+HYGG +P N++ G + P E +HVY V+W+ E+RWYVD L+ +T+W S PY APFD F LLLNLAVGG PG D T FPA M VDY+RVY Sbjct: 36 LVWSEEFEGSTLDESKWSYQLGDGCDIN--LCGWGNNELQHYRADNVTVADGLLTITA--LPSDEPDVPYTSGRIRSLNKADFRYGRIEARIKLPAGQGLWPAFWMLPTDEQYGGWAASGEIDIMEAVNLTAAGGNAVHGTLHYGGSWPENQYTG---KEYSPPDSVVEQFHVYRVDWQPGEIRWYVDDVLYQTQTQWHS---GNGPYPAPFDQRFHLLLNLAVGGNWPGAPDDATEFPAQMQVDYVRVY 275
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: UPI0019B0D815 (family 16 glycosylhydrolase n=1 Tax=Saccharospirillum salsuginis TaxID=418750 RepID=UPI0019B0D815) HSP 1 Score: 243 bits (621), Expect = 4.880e-75 Identity = 124/250 (49.60%), Postives = 164/250 (65.60%), Query Frame = 1 Query: 25 ILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTNDMDT----ILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVY 762 ++W D+F+G +LD +W + G+GCD G LCGWGN+E+Q Y DN V +G+L I A E+ YTS RIRS+ + GRIEAR++LPAGQG+W AFWMLPT+ + G WAA+GEIDIME+ N T + GT+HYGG +P N ++G P ++++H YAVEWE E+RWYVDG L+ +T+W SD + Y APFD +F LLLN+AVGG PG T+FP M VDY+RVY Sbjct: 29 LVWSDEFNGSSLDESLWSYQIGDGCDIG--LCGWGNNERQYYQADNVTVANGLLTIEARE--ERNKGSAYTSGRIRSIFKGDFTYGRIEARMKLPAGQGIWPAFWMLPTDEAYGGWAASGEIDIMEAVNLGGTGGNDVHGTLHYGGSWPDNVYSG---QVYTPSTSVTDNFHTYAVEWEPGEIRWYVDGLLYQTQTEWYSDNGA---YPAPFDQDFHLLLNVAVGGDWPGDPDSTTVFPTAMQVDYVRVY 268
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A7Y1TFS6_9GAMM (Glycoside hydrolase family 16 protein n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1TFS6_9GAMM) HSP 1 Score: 238 bits (606), Expect = 9.510e-74 Identity = 119/251 (47.41%), Postives = 162/251 (64.54%), Query Frame = 1 Query: 22 SILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYTLDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTNDM----DTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLFCQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVY 762 +++W D+FDG LDPEVW ESG+G G + GWGN+E + Y D+ + +GVL +TA R E + +TS+RI + A+ GRIEAR++LP GQGLW AFW+LP + + G WAA+GEID+ME+ N T+ GT+HYGGE+PAN +G +Q D + ++H YA+EW++ EMRWYVDG L+ + W S A+F APFD F +L N+AVGG PG T+FP M VDY+RVY Sbjct: 66 NLVWSDEFDGAQLDPEVWFFESGDGSQYG--IPGWGNNELEWYLPDSAELSNGVLIMTARR--ESQSGKNFTSARINTRDRFAFRYGRIEARMRLPGGQGLWPAFWLLPQDDTYGGWAASGEIDVMEAVNSAASGGSTVYGTLHYGGEWPANDSSG---SQYQVSTDVTTEFHDYALEWDETEMRWYVDGVLYAMQNSWYSSSAAFP---APFDQTFYILFNVAVGGNFPGAPNASTVFPVAMEVDYVRVY 306
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Match: A0A812XTA4_9DINO (GlcA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XTA4_9DINO) HSP 1 Score: 241 bits (616), Expect = 3.170e-73 Identity = 131/291 (45.02%), Postives = 176/291 (60.48%), Query Frame = 1 Query: 25 ILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYT--LDNHRVQDGVLYITADRVVEQVDERFYTSSRIRSVSPVAYLTGRIEARIQLPAGQGLWGAFWMLPTNTSRGNWAATGEIDIMESTNDMDTILGTIHYGGEFPANRFAGCKSAQLGPGLDYSEDYHVYAVEWEQDEMRWYVDGQLF--CQRTKWTSDLASFAPYRAPFDTEFELLLNLAVGGTLPGRIVDDTIFPATMLVDYIRVYDISTDVPEAEPFLGLPACLPGTIQAEAFDTGGLGLGYGESD 885 ++W D+FDG+ LD W ++G G G GWGN+E Q YT N V +G L I A + + + YTS+R+R+ +L GRIE R++LP+ G+W AFWMLPTN+ G WA++GEIDIMES N D++ GTIHYG +P N+ G L G+DYS+D+HV+++EWE D++RWY+DGQ + +W S A RAPFDT+F LLLN+AVGG PG +P T+ VDY+RVY PF PA +PG I+AE FD G G Y + D Sbjct: 13 LVWSDEFDGNQLDTSSWEAQTGTGTAYGL-PAGWGNNELQYYTNGSSNIVVSNGTLKIIARQ--QSFGGQPYTSARLRTQGMRDFLYGRIEGRMKLPSTSGVWPAFWMLPTNSPYGGWASSGEIDIMESINTADSMHGTIHYGNNWPNNQSNG---GSLNNGIDYSDDFHVFSIEWEPDQIRWYIDGQQYHSVNSNEWFSSAAP-GNVRAPFDTQFHLLLNVAVGGNWPGNPNGSASYPQTLEVDYVRVYQQIQG-----PFGDQPAEIPGRIEAEDFDNGFNGQSYQDCD 291 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8542.17576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8542.17576.1 >prot_L-elsbetiae_contig8542.17576.1 ID=prot_L-elsbetiae_contig8542.17576.1|Name=mRNA_L-elsbetiae_contig8542.17576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp GLRVTARSILWQDDFDGDNLDPEVWRVESGNGCDQGDGLCGWGNHEQQTYback to top mRNA from alignment at L-elsbetiae_contig8542:1301..8267+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8542.17576.1 ID=mRNA_L-elsbetiae_contig8542.17576.1|Name=mRNA_L-elsbetiae_contig8542.17576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6967bp|location=Sequence derived from alignment at L-elsbetiae_contig8542:1301..8267+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8542:1301..8267+ >mRNA_L-elsbetiae_contig8542.17576.1 ID=mRNA_L-elsbetiae_contig8542.17576.1|Name=mRNA_L-elsbetiae_contig8542.17576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig8542:1301..8267+ (Laminarionema elsbetiae ELsaHSoW15)back to top |