mRNA_L-elsbetiae_contig8529.17561.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE) HSP 1 Score: 342 bits (877), Expect = 2.080e-115 Identity = 159/181 (87.85%), Postives = 169/181 (93.37%), Query Frame = 1 Query: 346 RGDRWTQHALTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPLYPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVRSYGRPAVPAAREKKF 888 +GDRWTQ+ALTLFAAGYMV+DACWILCNPSGVKSP+TVLGHHVATLSVLVDPLLQ QH FYTACALLVEFNTFLLILRRRVSWGG LEVPFA+SWVALRLIWYPFL FYF MC FPETLK LYP+RLV+WR AVEEDRP MFLGS+LAWVGIC+FQGWWSCALVRSYGRPAV A R+KKF Sbjct: 89 KGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPRTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVQWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAV-ATRDKKF 268
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.770e-62 Identity = 102/169 (60.36%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 352 DRWTQHALTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGG--YLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPLYPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVRSYG 852 DR Q+ LT+FA YMV DA WILCN VKSP+TVLGHH ATL+VL+DP + QH YT ALLVE NTFLLI RRR WG +E PF SWVALRLIWYPFLAF++ +CAFP L +YP +VRWR +E D ++ S+ AWVGICVFQ WWS L R+YG Sbjct: 88 DRALQYGLTVFAVAYMVTDAAWILCNMRAVKSPRTVLGHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIWYPFLAFFWGLCAFPG-LADVYPAAIVRWRLRIEVDL-VRLYPASYAAWVGICVFQLWWSAQLFRNYG 254
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH) HSP 1 Score: 157 bits (398), Expect = 5.730e-43 Identity = 87/197 (44.16%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 322 GCAVALEHRGDRWTQHALTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPLYPDRL---VRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVRSY----GRPAVPA-AREKKF 888 G A+A DR LT+ Y+++D+ WI P VKSP V HH+ATL VL+DPLLQ +H YT+ LLVE NT LL+LRRRVS+ +EVPF ++WV LR IWYP L FYF +C P T PL P L + R+ +E P M S L+W +C+FQ +W+ L ++ GR A +EKK+ Sbjct: 84 GGAIAALALQDRNMHDLLTVSGFVYILLDSVWIFSQPKIVKSPGMVGSHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIWYPLLMFYFFLCFSPSTFIPLLPSSLSWVIEMRTKIELRNPVPMMGVSLLSWAMVCIFQFYWTAQLFSAHPWIWGRRKPTANGKEKKY 280
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP) HSP 1 Score: 150 bits (378), Expect = 3.890e-40 Identity = 70/152 (46.05%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 373 LTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPLYPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWS 828 LT Y+++D+ W+L P+ VKSP V+ HH ATL VL+DPLL H YT+ LLVE NT LL+LRR++S+ +EVPF +SWV LR +WYP L F+F +C+ P TL PL+P +V R +E M S ++W +CV Q W+ Sbjct: 84 LTTVGFMYVLLDSAWLLAVPTVVKSPGVVIAHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVWYPLLMFFFILCSAPGTLGPLFPRAMVEARRRIEGPEAVPMRFVSMVSWTAVCVLQLKWT 235
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.580e-37 Identity = 70/177 (39.55%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 373 LTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQ-----QHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPLYPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVRSYGRPAVPAAREKKF 888 +T Y+ +DA WI PS +KSP TV HH++TL++L+ P+ +YTA A++VE NT LL +RR+ +G ++E+PFA+SWV +RL+WYP L FYF +CAF + L P ++ R +E P ++ S +A+V IC+FQ +WS LV+S+ R ++ F Sbjct: 79 MTTLTTVYIALDAIWIFMFPSSIKSPVTVCLHHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVWYPILGFYFMVCAFHSVRELLAPQFILHIRETIEGPEPEPLWKLSAMAFVLICMFQIFWSVPLVKSWMRRLNGIGKQNHF 255
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.410e-24 Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 373 LTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPE 696 +T A Y++ D W++ P VKSP ++ HH+ TL+VL DP+ H Y +CALLVE NT L+ LRRR+ + EV F +W+ALRLIW+P L+++F +FPE Sbjct: 44 VTFGATAYIIFDIVWVMSQPRIVKSPVEIILHHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIWFPCLSYWFLCSSFPE 151
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A812KK43_9DINO (NMA1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KK43_9DINO) HSP 1 Score: 100 bits (249), Expect = 2.650e-21 Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 328 AVALEHRGDRWTQHALTL-FAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPL--YPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVR 843 A ALE G+ + H + + A Y+V DA WI P VK+P +V+ HH+ TL V+V+P+ + H + ALLVE NT LL LRR + + E+ F ++W +RLIW+P L F T PL P L + V E RP A+ + L++ + + Q +W+CA+ R Sbjct: 36 AAALES-GEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWT-SPLAALPPPLT---ALVVEVRPPAIRSYASLSFAAVVMLQFYWTCAMGR 205
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A812JJT5_9DINO (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JJT5_9DINO) HSP 1 Score: 100 bits (249), Expect = 5.920e-20 Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 328 AVALEHRGDRWTQHALTL-FAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCAFPETLKPL--YPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVR 843 A ALE G+ + H + + A Y+V DA WI P VK+P +V+ HH+ TL V+V+P+ + H + ALLVE NT LL LRR + + E+ F ++W +RLIW+P L F T PL P L + V E RP A+ + L++ + + Q +W+CA+ R Sbjct: 36 AAALES-GEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWT-SPLAALPPPLT---ALVVEVRPPAIRSYASLSFAAVVLLQFYWTCAMGR 205
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A813G2R2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2R2_POLGL) HSP 1 Score: 85.5 bits (210), Expect = 5.400e-16 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 358 WTQHALTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFL 663 W A+ + A Y+ D WI NPS VK+PK +L HH TL V++D + H + AL+VE NT LL LRR + + E+ F ++WV +RL+W+P L Sbjct: 65 WHTVAIAVMCA-YLAGDVVWIAVNPSMVKTPKAILAHHAVTLIVIMDTIESASHRANASHALIVEINTVLLTLRRILGRPLWCEIGFYLTWVGIRLVWFPAL 165
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Match: A0A7S0ASE2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ASE2_9DINO) HSP 1 Score: 85.5 bits (210), Expect = 9.950e-16 Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 373 LTLFAAGYMVVDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQQQHCFYTACALLVEFNTFLLILRRRVSWGGYLEVPFAVSWVALRLIWYPFLAFYFAMCA----FPETLKPLYPDRLVRWRSAVEEDRPAAMFLGSFLAWVGICVFQGWWSCALVRS 846 + +F + Y+V D W+ P+ V++P +++ HHV TL V+ + H + ALLVE NT LL LRRR+ + E F +W LRL+W+P L+ AM A F + L+ P L+ V+ P + + +++ + V Q +W+ L+RS Sbjct: 59 VVVFTSTYLVCDIVWVTLQPAIVRTPGSIVAHHVVTLVVIYGTVENVTHRVNASRALLVEINTVLLTLRRRLGRPVWCEAAFYATWGLLRLVWFPILSV--AMLASTFGFADQLRASMPACLL-----VDVRSPPPIKAYASISFAAVVVLQYYWTFTLLRS 213 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8529.17561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8529.17561.1 >prot_L-elsbetiae_contig8529.17561.1 ID=prot_L-elsbetiae_contig8529.17561.1|Name=mRNA_L-elsbetiae_contig8529.17561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp MESTYVYAARFFLQSPLRTPPPHLRRSSAWTPSCFFLRIIWWWFGFRIGKback to top mRNA from alignment at L-elsbetiae_contig8529:2697..7236- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8529.17561.1 ID=mRNA_L-elsbetiae_contig8529.17561.1|Name=mRNA_L-elsbetiae_contig8529.17561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4540bp|location=Sequence derived from alignment at L-elsbetiae_contig8529:2697..7236- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8529:2697..7236- >mRNA_L-elsbetiae_contig8529.17561.1 ID=mRNA_L-elsbetiae_contig8529.17561.1|Name=mRNA_L-elsbetiae_contig8529.17561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig8529:2697..7236- (Laminarionema elsbetiae ELsaHSoW15)back to top |