mRNA_L-elsbetiae_contig8506.17536.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8506.17536.1
Unique NamemRNA_L-elsbetiae_contig8506.17536.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A6H5JAG5_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG5_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.960e-47
Identity = 78/98 (79.59%), Postives = 87/98 (88.78%), Query Frame = 1 
Query:   43 MLVKVSWIVCAASAVGASSSQRKYDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGVCGEGCVVLLTRDPSPPPSSCRAVEPEDGVWAVDTHVGIAASG 336
            +L+++  ++CAAS VGASSSQRKYDGSTLSYDPKGR++QVEYAMEATRRGRTVLGVCG GCV L+TRDPSPP SSCRA  P  GVWAVDTHVGIAA G
Sbjct:    6 LLLEIVCVLCAASTVGASSSQRKYDGSTLSYDPKGRIYQVEYAMEATRRGRTVLGVCGGGCVALVTRDPSPPTSSCRAAGPHKGVWAVDTHVGIAACG 103
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A6H5K6L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L4_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 3.440e-38
Identity = 150/320 (46.88%), Postives = 176/320 (55.00%), Query Frame = 1 
Query:  415 MPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGG---------------------------GAEATARLASAGLTAG---------ASSVAVRGAGR-QDGVEGDV---GVVAGGXXXXXXXXXXP--------------LSPEHRAALKRAVSALWEPSGINGXXXXXXXXXXXXXXXXXXEGREDRDVEERREGGEQTLGGLRASELSAAVYGMQQRVA---PWEEDGXXXXXXXXXXXXXAADXSENDGEEEGAWEGRDRAWDQRVRCSRGDFIEILLELEAEEDNSN 1203
            MPCQ+LSRRLADL+HSCTTRGGKRPLAVD+LVGGVD+HAGASLH+VQATGAFQRYRA AAG                             G    +  A  G  +G         A++ +  GA   +DG  GD      VA  XXXXXXXXXX               L+PEHRAALKRAV+ALWEP+G        XXXXXXXXXXXX  G E+R   E       T GGLRA+EL+A VYG+Q++ +   P EE G               D     GE EGAWE       Q V CSR +   ILLELEAE++ ++
Sbjct:    1 MPCQILSRRLADLIHSCTTRGGKRPLAVDILVGGVDDHAGASLHRVQATGAFQRYRAFAAGXXXXXXXXXXXXXXXXXXDAREVXXXXXDGLRQASDDAVPGYLSGETRQGVPVDATTTSADGASSGEDGGRGDAEDSATVAXXXXXXXXXXXXXXXXXXXXXGQGRGTLAPEHRAALKRAVAALWEPAG-------GXXXXXXXXXXXXSAGGEERHGREAA-----TRGGLRAAELTATVYGIQRQASVESPKEERGGGESLGDP-----VGDAGLGGGEGEGAWE-------QGVGCSREEMESILLELEAEDETTS 296
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A7C4JD40_9ARCH (Proteasome subunit alpha n=3 Tax=TACK group TaxID=1783275 RepID=A0A7C4JD40_9ARCH)

HSP 1 Score: 113 bits (283), Expect = 1.470e-25
Identity = 66/172 (38.37%), Postives = 99/172 (57.56%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGV-CGEGCVVLLTRDPSPPPSSCRAVEPE--DGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEAT 618
            YD +   + P+GR++QVEYA+EA +RG T LG+ C +G VV + +    P      V+PE  + +W VD HVGIA +GL SD + ++  AR     HR V+  P+  ++L+RR++D+    T   G RP  V  ++ GVD + G  L+  + +GA+  Y AV  G G   AT
Sbjct:    9 YDRAITVFSPEGRLYQVEYALEAVKRGWTTLGIKCKDGVVVAVEKKRISP-----LVDPETMEKIWKVDDHVGIAYAGLASDGRVLIDRARIEAQIHRLVYDEPIDIEVLTRRISDIKQLYTQHAGVRPFGVSFIIAGVD-NTGPRLYMTEPSGAYAGYYAVVIGAGSQTAT 174
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A0V8RTX8_PYROC (Proteasome subunit alpha n=2 Tax=Pyrodictium occultum TaxID=2309 RepID=A0A0V8RTX8_PYROC)

HSP 1 Score: 113 bits (283), Expect = 1.470e-25
Identity = 65/169 (38.46%), Postives = 100/169 (59.17%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGV-CGEGCVVLLTRDPSPPPSSCRAVEPEDGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEA 615
            YD ST  + P GR+FQVEYAMEA +RG T++GV   EG V++  +  + P      +E    V+ VD H+G    G  SD + ++  AR    +++FV+G P+P + L+R++ DL+   T  GG RP  V +++ GVDE AG  L+  + +G +  Y+A   G GG++A
Sbjct:   12 YDRSTSMFSPDGRLFQVEYAMEAAKRGWTMVGVRTAEGVVIVAEKRKTSPLIDIGQLEK---VYMVDEHIGAGFVGFGSDGRVLIDYARLLAVQYKFVYGEPIPVEYLTRQVCDLMQVYTQHGGVRPFGVTLMIAGVDE-AGPKLYVAEPSGQYISYKAHGLGQGGSQA 176
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A497EW46_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Verstraetearchaeota archaeon TaxID=2250257 RepID=A0A497EW46_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 2.240e-25
Identity = 63/165 (38.18%), Postives = 98/165 (59.39%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGV-CGEGCVVLLTRDPSPPPSSCRAVEPEDGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGG 603
            YD +   + P GR+FQVEYAMEA R+G T LG+ C EG V++  +    P    R++E    ++ VD H+GI  +G+ SD + ++  ART    +R ++  P+  ++L+RR++DL+   T  GG RP  V +L+ GVD++ G  L   + +GA+  Y A A G G
Sbjct:    3 YDRAITIFSPDGRLFQVEYAMEAVRKGFTTLGIRCSEGVVLIAEKRRIFPLIDFRSIEK---IFKVDEHIGITYAGIPSDARVLIDRARTQAQINRLLYDEPIDVEVLTRRISDLMQLYTQHGGVRPFGVSLLIAGVDDY-GPRLFMTEPSGAYAGYLARAIGAG 163
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A1J5T6V3_9ARCH (Proteasome subunit alpha n=1 Tax=Marine Group III euryarchaeote CG-Bathy1 TaxID=1889001 RepID=A0A1J5T6V3_9ARCH)

HSP 1 Score: 112 bits (279), Expect = 4.730e-25
Identity = 67/166 (40.36%), Postives = 94/166 (56.63%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGVCGEGCVVLLTRDPSPPPSSCRAVEPE--DGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGG 603
            YD +   + P GR+FQVEYA EA +RG T +G+  +  VVLL           R VEP+  + V+ +D +VG A SGL +D + +V  AR  C  +RF +G  MP + L ++L D   S T  GG RP    +LV GVDE+ GA L++   +GA   Y+A+  G G
Sbjct:    8 YDRAITVFSPDGRLFQVEYAREAVKRGTTTVGIKYKDGVVLLVEKRV----GSRLVEPDSIEKVFKIDGNVGCATSGLVADARSLVDRARVECQTNRFNYGEEMPIEALVKKLCDFKQSYTQYGGVRPFGTALLVAGVDEY-GAHLYETDPSGAMTSYKAIGIGAG 168
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A662J1B8_9CREN (Proteasome subunit alpha n=2 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662J1B8_9CREN)

HSP 1 Score: 111 bits (278), Expect = 6.870e-25
Identity = 66/173 (38.15%), Postives = 98/173 (56.65%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGV-CGEGCVVLLTRD---PSPPPSSCRAVEPEDGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEAT 618
            YD +   + P GR+FQVEYA+EA RRG T LGV C EG V+ + +    P   PSS   +      W +D HVG+A +GL SD + ++  AR     ++ ++  P+  ++L+R+++DL    T   G RP  V  L+ GVD+ AG  L   + +GA+  Y AVA G G  +A+
Sbjct:    9 YDRAITVFSPDGRLFQVEYALEAVRRGWTTLGVRCPEGAVLAVEKKRILPLVDPSSMEKI------WKIDEHVGVAYAGLASDGRVLIDRARVEAQINKLIYDEPIDVEILTRKISDLKQLYTQHAGVRPFGVSFLIAGVDK-AGPKLFMTEPSGAYAGYYAVAIGAGSQQAS 174
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: S5ZKP7_9CREN (Proteasome subunit alpha n=5 Tax=Thermofilum TaxID=2268 RepID=S5ZKP7_9CREN)

HSP 1 Score: 111 bits (277), Expect = 9.090e-25
Identity = 66/169 (39.05%), Postives = 92/169 (54.44%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGVCGEGCVVLLTRDPSPPPSSCRAVEPEDGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEAT 618
            YD +   + P+GR++QVEYA EA +RG T LGV     VVL     S  P     +E  + +  +DTHVG+A +GL  D + ++  AR +   HR V+G P+P ++L +R+ D+    T  GG RP  V  L  GVD  AG  L Q    G + R +A A G G  +AT
Sbjct:   10 YDRAITIFSPEGRLYQVEYAFEAVKRGMTALGVKAVDGVVLAVEKRSSSP----LIEGTEKIKKIDTHVGVAFAGLFGDARVLIDQARVYAQSHRLVYGEPIPIELLVKRICDIKQVYTQHGGVRPFGVAFLFAGVDR-AGPHLVQTDPGGTYLRCKARAIGIGAQKAT 173
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A7C2WB74_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C2WB74_9ARCH)

HSP 1 Score: 111 bits (277), Expect = 1.040e-24
Identity = 65/172 (37.79%), Postives = 98/172 (56.98%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGV-CGEGCVVLLTRDPSPPPSSCRAVEPE--DGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEAT 618
            YD +   + P+GR++QVEYA+EA +RG T LG+ C +G VV + +    P      V+PE  + +W VD HVGIA +GL SD + ++  AR     +R ++  P+  ++L+RR++DL    T   G RP  V  ++ GVD   G  L+  + +GA+  Y AV  G G   AT
Sbjct:    9 YDRAITVFSPEGRLYQVEYALEAVKRGWTTLGIRCRDGVVVAVEKKRISP-----LVDPETMEKIWKVDDHVGIAYAGLASDGRVLIDRARIEAQIYRLIYDEPIDVEVLTRRISDLKQLYTQHAGVRPFGVSFIIAGVDR-TGPRLYMTEPSGAYAGYYAVVIGAGSQTAT 174
[Close]
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Match: A0A497G4C2_9CREN (Proteasome subunit alpha n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A497G4C2_9CREN)

HSP 1 Score: 111 bits (277), Expect = 1.040e-24
Identity = 63/173 (36.42%), Postives = 94/173 (54.34%), Query Frame = 1 
Query:  112 YDGSTLSYDPKGRMFQVEYAMEATRRGRTVLGV-CGEGCVVLLTRDPSPPPSSCRAVEPEDGVWAVDTHVGIAASGLRSDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPLAVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEATARL 627
            YD +   + P GR++QVEYA EA RRG T +G+ C EG V+ +      P       EP + +  +D H+G+  +GL SD + ++  AR +   HR ++G P+P ++L++R+ D+  + T  GG RP  V  L+ GVDE  G  L Q    G++    A A G GG  A   L
Sbjct:    9 YDRAITIFSPDGRLYQVEYAFEAVRRGYTSIGIKCKEGVVLAVENKKQYP-----LAEPFEKIQKIDGHIGLTFAGLASDARVLIDKARIYAQIHRLIYGEPIPVEVLAKRICDIKQAFTQHGGVRPFGVAFLIAGVDE-TGPKLMQTDPQGSYLSLYAHAIGSGGETALGLL 175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8506.17536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAG5_9PHAE4.960e-4779.59PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A6H5K6L4_9PHAE3.440e-3846.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7C4JD40_9ARCH1.470e-2538.37Proteasome subunit alpha n=3 Tax=TACK group TaxID=... [more]
A0A0V8RTX8_PYROC1.470e-2538.46Proteasome subunit alpha n=2 Tax=Pyrodictium occul... [more]
A0A497EW46_9ARCH2.240e-2538.18Proteasome subunit alpha n=1 Tax=Candidatus Verstr... [more]
A0A1J5T6V3_9ARCH4.730e-2540.36Proteasome subunit alpha n=1 Tax=Marine Group III ... [more]
A0A662J1B8_9CREN6.870e-2538.15Proteasome subunit alpha n=2 Tax=Thermoprotei arch... [more]
S5ZKP7_9CREN9.090e-2539.05Proteasome subunit alpha n=5 Tax=Thermofilum TaxID... [more]
A0A7C2WB74_9ARCH1.040e-2437.79Proteasome subunit alpha n=1 Tax=Candidatus Bathya... [more]
A0A497G4C2_9CREN1.040e-2436.42Proteasome subunit alpha n=1 Tax=Thermoprotei arch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8506contigL-elsbetiae_contig8506:1735..6209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeArchaea
Seed ortholog score112.8
Seed ortholog evalue3.5e-22
Seed eggNOG ortholog1365176.N186_03850
Preferred namepsmA
KEGG koko:K03432
KEGG Pathwayko03050,map03050
KEGG ModuleM00342,M00343
Hectar predicted targeting categorysignal peptide
GOsGO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019773,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation
EggNOG OGs2XQ8X@28889,COG0638@1,arCOG00971@2157
EC3.4.25.1
COG Functional cat.O
Best tax levelCrenarchaeota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-07_005450.1
Exons5
Model size1206
Cds size1164
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8506.17536.1prot_L-elsbetiae_contig8506.17536.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8506 1777..6209 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816933.6712618-UTR-L-elsbetiae_contig8506:1734..17761622816933.6712618-UTR-L-elsbetiae_contig8506:1734..1776Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8506 1735..1776 +
1691683923.2512167-UTR-L-elsbetiae_contig8506:1734..17761691683923.2512167-UTR-L-elsbetiae_contig8506:1734..1776Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8506 1735..1776 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816933.6849754-CDS-L-elsbetiae_contig8506:1776..18781622816933.6849754-CDS-L-elsbetiae_contig8506:1776..1878Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 1777..1878 +
1691683923.269736-CDS-L-elsbetiae_contig8506:1776..18781691683923.269736-CDS-L-elsbetiae_contig8506:1776..1878Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 1777..1878 +
1622816933.69524-CDS-L-elsbetiae_contig8506:2782..29731622816933.69524-CDS-L-elsbetiae_contig8506:2782..2973Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 2783..2973 +
1691683923.2782507-CDS-L-elsbetiae_contig8506:2782..29731691683923.2782507-CDS-L-elsbetiae_contig8506:2782..2973Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 2783..2973 +
1622816933.7103589-CDS-L-elsbetiae_contig8506:3949..40511622816933.7103589-CDS-L-elsbetiae_contig8506:3949..4051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 3950..4051 +
1691683923.2866542-CDS-L-elsbetiae_contig8506:3949..40511691683923.2866542-CDS-L-elsbetiae_contig8506:3949..4051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 3950..4051 +
1622816933.7214084-CDS-L-elsbetiae_contig8506:4805..48821622816933.7214084-CDS-L-elsbetiae_contig8506:4805..4882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 4806..4882 +
1691683923.2977383-CDS-L-elsbetiae_contig8506:4805..48821691683923.2977383-CDS-L-elsbetiae_contig8506:4805..4882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 4806..4882 +
1622816933.7315872-CDS-L-elsbetiae_contig8506:5517..62091622816933.7315872-CDS-L-elsbetiae_contig8506:5517..6209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 5518..6209 +
1691683923.309385-CDS-L-elsbetiae_contig8506:5517..62091691683923.309385-CDS-L-elsbetiae_contig8506:5517..6209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8506 5518..6209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8506.17536.1

>prot_L-elsbetiae_contig8506.17536.1 ID=prot_L-elsbetiae_contig8506.17536.1|Name=mRNA_L-elsbetiae_contig8506.17536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=388bp
MLVKVSWIVCAASAVGASSSQRKYDGSTLSYDPKGRMFQVEYAMEATRRG
RTVLGVCGEGCVVLLTRDPSPPPSSCRAVEPEDGVWAVDTHVGIAASGLR
SDIQYVVGCARTWCSEHRFVFGGPMPCQMLSRRLADLVHSCTTRGGKRPL
AVDVLVGGVDEHAGASLHQVQATGAFQRYRAVAAGGGGAEATARLASAGL
TAGASSVAVRGAGRQDGVEGDVGVVAGGGKGRRRRRRRPLSPEHRAALKR
AVSALWEPSGINGGGGGGGGGGGGRRNGGGGEGREDRDVEERREGGEQTL
GGLRASELSAAVYGMQQRVAPWEEDGGHAAGGGSESHHDAADDSENDGEE
EGAWEGRDRAWDQRVRCSRGDFIEILLELEAEEDNSN*
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mRNA from alignment at L-elsbetiae_contig8506:1735..6209+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8506.17536.1 ID=mRNA_L-elsbetiae_contig8506.17536.1|Name=mRNA_L-elsbetiae_contig8506.17536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4475bp|location=Sequence derived from alignment at L-elsbetiae_contig8506:1735..6209+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGGAGGCAGGAAGAAAGAAGAGAGCTCGGGAGGTTGAGAGATGCTGGT
CAAGGTGTCTTGGATCGTTTGTGCGGCTTCTGCTGTCGGAGCTTCGTCAA
GTCAACGGAAGTATGACGGCAGCACCCTCAGCTACGACCCAAAGGTACAC
TCTCATAAAATATGCGACCCCAGCCCACGACACCGACACCGCGCCTTCGC
AGACACATACTGTAGCGAGTACCCCCGTTTGGCAGCAGCCTCGCAGAGTT
TTTTGCTGACGTTATCGTCGATATACCACGATCTTGCTCCGATCGCGGAC
TGTCTGTTGCAGATGTGTGTACCTACGTACCTACCAGCACCAGCTGGTGT
GTACGCCTCCCGCAGAGATTAGGAGCTGGAGATGAGAACATGCATAGCAT
ACCCCAGAAACAGGCAGACTATGTACCTGTACCCGTTTACATACATACCT
AGTCTATATATGGACATACACAAATGAACAAGGCAGCACGCGAATTGCGT
GGATTTCGTGCAGCTGTAGCCGGGGGGGTGGTGAAAGGGGGTTGGTGTTC
CCACAACAGCAGTCCTCCTGGAGGGACCATTCTCCTCCGTTGGAAGTACT
TGTCACGCGTACAGAGTACAGTAGAATACTCCGTGACGTACGTAGATACG
AAGCGAGCAGCGACTGAGACCATCGCACAAGCAAAGCAGTCTTGCCACCC
TTAGGGGCCACTTGTTTGTGTACATTTGCGTTCGGAGTCGAAATTCTAGA
GCTTGGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTACTAGCTAGAT
AGAGTACCCCCGCCCGCCAGAGAAACTGCCACAAGGGTGGCAGCTTTGAA
ATAAATGGGATGGCGTCGGGGACAACGTGTCCGGTGGTGCGCCGTCTGCC
GAACAGAATATAACGACGGGCTGGCGTCCTGCCCTGCGTGTGCTTCGATA
ATTTATAGACTAATTGTTTCTTCGAGGGCAAGTGCAAAAAAATAAAACAC
ACAACATCCCACCCCGGGCGAATGCTTTTCTCGCGCGCTGCCACTCAGGG
GAGGATGTTCCAGGTCGAGTACGCCATGGAGGCCACCCGGCGCGGCCGCA
CAGTGCTCGGCGTCTGCGGCGAAGGCTGCGTGGTTCTTTTGACGCGAGAC
CCGTCGCCGCCGCCGTCCTCCTGCCGCGCGGTGGAGCCCGAGGACGGCGT
TTGGGCGGTGGACACCCACGTCGGAATCGCCGCTTCCGGGTGAGATGGGG
CGATGGGATGGCGCGGCTACCGTCGCTGTGGAGAGGGGACGGGTGCGGTG
CACACTAGCGTTCGGGCGGTAGAAATAACGGCTGGGGAAAGGCAGAGCGG
CGGGTGGGAGAATAAGACAGGCCGCACTCCACAGCAGTAGTGAGGTATGT
AGAGCGGATCATTTGAGAAAAGTACTCCACAGCAGTAGTGAGGTAGATCG
GGTCATTTGAGAAAATCCGGCGGGATGATCAAGGGAAGCAAGGGGTGCTG
GAGAAGCAAGGGTTGACAGCAGTGTGTTTGATACACAGGCAGACAGGCAG
ACAGCAGTAGCAGCGCGTGTCGTCAGAAAGGAGTGCATCGTGAAGTTTTG
ATGCCTTGAAGCGGTCCACCCGGACTTGTTTACGCTTTTGTCCTAGGTAG
CGGGCTACAGATTAAGCCCCGAAGGATACGTTGATGTCCCAGATGCGGCA
CCGCAAATGCATCGAACGCGAGCTGCTGTTTTTCCACCAAAAGAGCTTCC
GGCACACTTTTTTTGCGATTTGCCTTTGGGGGTGCTCTTGTCATTTTCCT
CTGCCAGCTGACTGCTGCTCCCGAGAAAAGTTAGAGCTGCACATTTCTCC
GAATCTGCTGTTGGTTTCTGGTTGTGCCGGGCTTGCTTTTTAACCCAAAC
CGCTCGTTTCCGCCCGCCCGCTTGTTGCCGTTCATGAGCTTGTCAACGTG
CTTTTTTGAAGTAAAACAAATAATCAAAGATGGAACCTAACCCATACTAG
AGCAAAGACTCGATATGGGGTTCAAACGGCATTCCATATTTACGCACGCC
GGTTCCCTTACGATAGCCATTTTGCTCTACTCGCCCCCGAGACGAAACCT
GCAAGAGTTCAAGAGGTAAACATGGGGCGCATCAACCCAATCGTTACTGC
TGTGCCGTATTGTAACCGATCCTCTGTTTTTTCCCCGGCGGCATATCCTG
CGTTGGCGGACGTAGGCTACGGAGCGACATCCAGTACGTCGTGGGCTGCG
CTAGAACGTGGTGCTCGGAGCACCGTTTCGTCTTCGGCGGGCCGATGCCA
TGCCAGATGCTTTCCAGGTGATGAAGTCCAGACATGGCCTCTTTATGTAT
GTATGACGTTGTTGTTGAGCCAAGCTCAAGGTCGAGATGGGAGATTAGGC
AGGGGTATATGTGCGACTCTAGGCCTGAGTTACGGGACACGAGGGTAGAA
GGGTGTGTGTGATGGGGAGGGAACGAAGGAGCAAAACCACGCAGTCGCGC
CTTTGTGAAGACGCGTTTTTTGGCCGGCAACGCTGCTACGTACGAAATGA
GTTCCACGACTTAACGATTGGGCCTGGAAGTTCTACTCCTACTCCGCGAG
TCGCTGGACGATCGCCAGGTGCCCGAGGGGCTCCGTGCTTCTGAAAACTA
ACGAGACGACCACGTCCTCTCGTCCGAGGCGGGGGCATAATGCAGAACCC
CCACGTATCGGTTGTCGAGTAGCAGAGTCATTGGTTTGTCCCCTAAGTGC
GTGTTGTGTGTTTATCTTCTCGGACAGCTGGGGCATCCAATATTTCAGTA
TTTTAACTTTCGTGGACGTGATATCCTGACGTGATCGAAGTATTTATTAC
TTATTACATGGCCGTGACATCGTGCCGCATGACACGGCCCATCACGAACC
ACATGAGGACTCAGGGTTGCGCTGAACAGTTTGATCTTCGCCCCCAAGCT
CCTTGAGCCAACTTTTGTGTCGGGGGTTTACTTCCATGCTGACGTCGTAT
GTATATACTTCGTATGTGCGAGCGCCGCACATAACACCTGGTTGTTTTTT
TCCCGCTCCGTTCCCCCTCAGACGGCTCGCCGATCTAGTCCATTCGTGTA
CTACCCGCGGCGGCAAGAGACCACTGGCGGTTGATGTCCTGGTGGGAGGT
GAGTTGGTTGCTCTGTAAGTCAAGCAGCGGAGAGGCGCTCCAGACACGGT
TGTTGTCTATGATTATGATTCCACGCATCGGGGCGGCATTGGGTGCGCGA
TAAAACGCTCGGGAAAAAGGATAGGTCTCGTCGTCGACGGAAGCAATGCG
TGCGAAAGGGAACATACAGCATCTCGAGGGTACATACAACAGCAGGACGA
GTGAGAAAACGTGGCCGTTCGAATTCGAAACCCAAATCTCTGCAGGTTGG
TTTCATGATCGGGGCGCCGACTGCCTCGTGTGCCTTGTCGTTTGTGCGCA
TGGCGCTGCGGCACCGTTGCGGGGTTTTGCCAGCATGGACATCTCCCTGC
CGCTGGTTTTGAGCATTACTACTGACTACTGTGACGCACTTGGTGACACC
GGAAGCAACGTGGCACACAACAACGCCAGTTTATGATTTCCCGCTTTCCC
CAATAGCAGTCTCCGCCGCACCTGTGGTGAGGGGTCCCGGCTGGATGTTC
CGTATTTTTGTGTCCTATGTAGCTCTCCACATTATTTTGGATGGCGAATC
GCGTGGTTTGCCGTCCAACAAGCCCTTGACACGCTCTGCCGTAACTACTC
GCGTCGCCGTGCACACCTCTCCCCCTCCCACAGGGGTGGACGAGCATGCC
GGTGCCAGCCTTCACCAGGTCCAGGCGACCGGAGCGTTCCAGCGCTACCG
AGCGGTGGCCGCGGGCGGGGGCGGCGCAGAGGCCACCGCCCGCCTTGCAT
CCGCCGGTCTGACCGCCGGTGCTTCTAGCGTTGCTGTTCGTGGTGCCGGC
CGCCAAGATGGCGTCGAGGGCGATGTCGGAGTGGTCGCGGGTGGAGGAAA
AGGGCGCCGCCGCCGCCGCCGCCGCCCGCTCTCGCCGGAGCACCGTGCGG
CTCTGAAGCGTGCCGTTTCGGCTCTGTGGGAGCCCTCGGGGATAAACGGT
GGCGGCGGCGGTGGTGGTGGCGGGGGCGGGGGTCGGCGCAACGGCGGCGG
CGGCGAGGGCCGGGAGGACCGGGACGTCGAGGAACGCCGAGAAGGAGGAG
AGCAGACGCTCGGAGGTTTGAGGGCCTCTGAGCTGTCGGCCGCGGTTTAC
GGGATGCAGCAGCGAGTTGCTCCGTGGGAAGAGGACGGCGGCCACGCCGC
TGGTGGTGGTTCTGAGAGCCACCATGACGCGGCGGACGACTCGGAAAATG
ACGGCGAGGAAGAGGGTGCTTGGGAGGGGAGGGATAGGGCGTGGGATCAA
CGGGTCCGGTGCTCGCGGGGAGATTTTATTGAAATTTTGCTAGAGCTGGA
GGCGGAGGAGGACAACTCGAACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8506:1735..6209+

>mRNA_L-elsbetiae_contig8506.17536.1 ID=mRNA_L-elsbetiae_contig8506.17536.1|Name=mRNA_L-elsbetiae_contig8506.17536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2328bp|location=Sequence derived from alignment at L-elsbetiae_contig8506:1735..6209+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGTCAAGGTGTCTTGGATCGTTTGTGCGGCTTCTGCTGTCGGAGC
TTCGTCAAGTCAACGGAAGTATGACGGCAGCACCCTCAGCTACGACCCAA
AGATGCTGGTCAAGGTGTCTTGGATCGTTTGTGCGGCTTCTGCTGTCGGA
GCTTCGTCAAGTCAACGGAAGTATGACGGCAGCACCCTCAGCTACGACCC
AAAGGGGAGGATGTTCCAGGTCGAGTACGCCATGGAGGCCACCCGGCGCG
GCCGCACAGTGCTCGGCGTCTGCGGCGAAGGCTGCGTGGTTCTTTTGACG
CGAGACCCGTCGCCGCCGCCGTCCTCCTGCCGCGCGGTGGAGCCCGAGGA
CGGCGTTTGGGCGGTGGACACCCACGTCGGAATCGCCGCTTCCGGGGGAG
GATGTTCCAGGTCGAGTACGCCATGGAGGCCACCCGGCGCGGCCGCACAG
TGCTCGGCGTCTGCGGCGAAGGCTGCGTGGTTCTTTTGACGCGAGACCCG
TCGCCGCCGCCGTCCTCCTGCCGCGCGGTGGAGCCCGAGGACGGCGTTTG
GGCGGTGGACACCCACGTCGGAATCGCCGCTTCCGGGCTACGGAGCGACA
TCCAGTACGTCGTGGGCTGCGCTAGAACGTGGTGCTCGGAGCACCGTTTC
GTCTTCGGCGGGCCGATGCCATGCCAGATGCTTTCCAGGCTACGGAGCGA
CATCCAGTACGTCGTGGGCTGCGCTAGAACGTGGTGCTCGGAGCACCGTT
TCGTCTTCGGCGGGCCGATGCCATGCCAGATGCTTTCCAGACGGCTCGCC
GATCTAGTCCATTCGTGTACTACCCGCGGCGGCAAGAGACCACTGGCGGT
TGATGTCCTGGTGGGAGACGGCTCGCCGATCTAGTCCATTCGTGTACTAC
CCGCGGCGGCAAGAGACCACTGGCGGTTGATGTCCTGGTGGGAGGGGTGG
ACGAGCATGCCGGTGCCAGCCTTCACCAGGTCCAGGCGACCGGAGCGTTC
CAGCGCTACCGAGCGGTGGCCGCGGGCGGGGGCGGCGCAGAGGCCACCGC
CCGCCTTGCATCCGCCGGTCTGACCGCCGGTGCTTCTAGCGTTGCTGTTC
GTGGTGCCGGCCGCCAAGATGGCGTCGAGGGCGATGTCGGAGTGGTCGCG
GGTGGAGGAAAAGGGCGCCGCCGCCGCCGCCGCCGCCCGCTCTCGCCGGA
GCACCGTGCGGCTCTGAAGCGTGCCGTTTCGGCTCTGTGGGAGCCCTCGG
GGATAAACGGTGGCGGCGGCGGTGGTGGTGGCGGGGGCGGGGGTCGGCGC
AACGGCGGCGGCGGCGAGGGCCGGGAGGACCGGGACGTCGAGGAACGCCG
AGAAGGAGGAGAGCAGACGCTCGGAGGTTTGAGGGCCTCTGAGCTGTCGG
CCGCGGTTTACGGGATGCAGCAGCGAGTTGCTCCGTGGGAAGAGGACGGC
GGCCACGCCGCTGGTGGTGGTTCTGAGAGCCACCATGACGCGGCGGACGA
CTCGGAAAATGACGGCGAGGAAGAGGGTGCTTGGGAGGGGAGGGATAGGG
CGTGGGATCAACGGGTCCGGTGCTCGCGGGGAGATTTTATTGAAATTTTG
CTAGAGCTGGAGGCGGAGGAGGACAACTCGAACTGAGGGTGGACGAGCAT
GCCGGTGCCAGCCTTCACCAGGTCCAGGCGACCGGAGCGTTCCAGCGCTA
CCGAGCGGTGGCCGCGGGCGGGGGCGGCGCAGAGGCCACCGCCCGCCTTG
CATCCGCCGGTCTGACCGCCGGTGCTTCTAGCGTTGCTGTTCGTGGTGCC
GGCCGCCAAGATGGCGTCGAGGGCGATGTCGGAGTGGTCGCGGGTGGAGG
AAAAGGGCGCCGCCGCCGCCGCCGCCGCCCGCTCTCGCCGGAGCACCGTG
CGGCTCTGAAGCGTGCCGTTTCGGCTCTGTGGGAGCCCTCGGGGATAAAC
GGTGGCGGCGGCGGTGGTGGTGGCGGGGGCGGGGGTCGGCGCAACGGCGG
CGGCGGCGAGGGCCGGGAGGACCGGGACGTCGAGGAACGCCGAGAAGGAG
GAGAGCAGACGCTCGGAGGTTTGAGGGCCTCTGAGCTGTCGGCCGCGGTT
TACGGGATGCAGCAGCGAGTTGCTCCGTGGGAAGAGGACGGCGGCCACGC
CGCTGGTGGTGGTTCTGAGAGCCACCATGACGCGGCGGACGACTCGGAAA
ATGACGGCGAGGAAGAGGGTGCTTGGGAGGGGAGGGATAGGGCGTGGGAT
CAACGGGTCCGGTGCTCGCGGGGAGATTTTATTGAAATTTTGCTAGAGCT
GGAGGCGGAGGAGGACAACTCGAACTGA
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