mRNA_L-elsbetiae_contig8497.17517.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: D8LMR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR7_ECTSI) HSP 1 Score: 509 bits (1310), Expect = 2.450e-164 Identity = 507/917 (55.29%), Postives = 569/917 (62.05%), Query Frame = 2 Query: 59 MEQNTPN---------AGAVVSTSAE-DGGDS-VGQVMSNNQVEEDEEQEREDSAYGSGDFDELSKAGGTESEYDSRDYGLDEDDQSSIISPTTEDGSVTRTTETGGVRAGASGEGESGEMQGGGNKAIAGVTTA--------GLDDQNSLSSYADDFADDESIIPAAQHTTASPASENPNGANTATAADSGSGDAVTQQGGEDGPQRSPAAASSESKIEE-----------KTNGGNSNRSSRXXXXXRDQRPISGSSGTHKSGDGAMTSGSGLEVREDDVE-----RGATSKVN-------SSPSVSELRDRLREADLENARLREAMEKS-AASASSGGSGDDRKELEILKGQVEAAKAMILSSLDDGEGKPERTLLELVLLAESRGYKQAEEATRAASGEGRXXXXXXXXXXXXXXXXXXXVKVEAIARAELEKRVESLERDLTRAGQESRAQSARAASLQRQLDGGXXXXXXXXXRSGSAQGRRGXXXXXGSALGLN-------GLDVTAEGVATADIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGD----SSLLDTMRVDP---PHLSHSSSAPGIGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKGGVAGQ--------------------QRGGRGALTPNLSEAPFPGRQQQ--QRSGAGNGSNP------ATGGGSLKSA---MPGYGGVASGAGVRGGSPQGGMMPGMPLNPGGLSAGTDPGG-LLGD---SRGGGGSGGKGRPPWSEQGGGKGLNGGRHASQQVLYA 2533 MEQ + N AGA STSAE +GGDS V +V +NQ EE+E +R SAYGS DFD+ SK ESEYDSRDYG EDD+SS SPTT DGS T+TT T E GE++ N+A+ G +TA +S+ P A AA + G+ +Q E G Q + +NGG+ + D R G +G + A G G+ D RG +V+ S P V+EL +RLR A+LENARLREA E++ AA+ S G +KELE+LK QVEAA+A++LSSL DGE KPERTLLELVLLAES+GYKQAE+ XXXXXXXXXXXXXXXXXX VKVE+IARAELEKRVESLERDL RAGQESRAQSARAASLQRQLD G +G Q GXXXXXG A G+ GLD GVATADIMALK+KATQLVERLR EK+ RLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARS ALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAIL GDG+ SSLLDTM+VD PHL+HSSSAPG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGG+ L P+ S+ QQ QRSG G G++ G K+A +PGY G G RGGSP GG+ G LSAGTDPGG LLGD RGG G GG+ RPPWSEQGGG+G G AS+++LYA Sbjct: 1 MEQGSSNGSRSSGDYPAGASASTSAEGNGGDSSVDKVTKSNQDEEEEGDDR--SAYGSEDFDDQSKCSAAESEYDSRDYGFGEDDRSSTNSPTTADGSQTQTTGT---------AAEDGEVEAR-NEAVGGESTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDKPPDAAGVAAAGNVDGNETNRQQ-ERGEQSAXXXXXXXXXXXXXXXXXXXXXXXNSNGGDKGSA--------DTRTAGGKNGDRHRQESASDRGDGMGNDRDATTNPGGARGVVREVDDKDRPMGSLPPVTELEERLRRANLENARLREAAEQNIAATPGSADDGGAKKELEVLKHQVEAARAVMLSSLADGEDKPERTLLELVLLAESQGYKQAEKNNXXXX----XXXXXXXXXXXXXXXXXXAVKVESIARAELEKRVESLERDLARAGQESRAQSARAASLQRQLDSGG---------NGGDQSGSGXXXXXGVAGGVGVVVNSGGGLDDVTIGVATADIMALKVKATQLVERLRHEKSARLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSTALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILCGDGEGGGGSSLLDTMQVDVAPGPHLNHSSSAPGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVPLSRGGQDPLAPSTSDPSLLRGQQTRPQRSGFGGGNSSLKMVGAGXXXGKFKNAAVPLPGYAG--GGGAARGGSPPGGLSAG-------LSAGTDPGGELLGDMGTGRGGTGGGGQ-RPPWSEQGGGRGA--GDIASKKILYA 871
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A835YJ85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ85_9STRA) HSP 1 Score: 152 bits (383), Expect = 7.830e-37 Identity = 98/182 (53.85%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 1445 TAEGVATADIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILS------GDGDSSLLDTMRVDPPHL 1972 T T DI AL+ + QLVE LRQEK RL+A + ++ AG V+ LS+H+EKLM +LKHEA KA+AHEQQ RLQKE+EL++AR AL R AK R +ELREGSKILEDQLRLMD KY+ELR KLD TR +A ++V A+ + LR KW LS G +LLD VDP + Sbjct: 24 TGLAAITGDIAALRSRCLQLVEALRQEKGRRLRAVGEGERQAGHVRALSEHVEKLMAYLKHEAAAKARAHEQQLRLQKEVELLRARGAALERKAAAKSRAISELREGSKILEDQLRLMDAKYVELRGKLDRTRARAAREVGAAKRDCTRLRVKWTTLSREFGGCGGLRGALLD--EVDPAQV 203
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A7S1UHS9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHS9_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.260e-35 Identity = 99/187 (52.94%), Postives = 130/187 (69.52%), Query Frame = 2 Query: 1451 EGVATADIM-ALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILS-GDGDSSLLDTMRVDPPHLSHSSSAPGIGK 2005 E TAD M AL+++AT L R RQEK + +AE + KV LSDHIEKLM+ LKHEA KAKA E QRR Q+E L++ R+ AL++ N A++RV E++EGSKILEDQLRLMDEKY+ELR KLDWTR KA ++V++ +A+AS LR ++A+L G+G LLD RV L + S G+G+ Sbjct: 286 EDQGTADDMKALRMRATHLASRHRQEKEAKYRAEDALRSSNKKVAALSDHIEKLMLHLKHEAASKAKAFELQRRAQRETTLLRKRNQALVKRNTARERVILEMQEGSKILEDQLRLMDEKYLELRVKLDWTRNKATQEVKKFKAEASNLRARFALLHPGEG---LLDDARVQQDTLQLAMSM-GLGQ 468
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A7S2B9G0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9G0_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.810e-33 Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 2 Query: 1460 ATADIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGDSSLLDTMRVDPPHLSHSSSAPG 1996 A+ D+ LK KA L+ER + EK +RL+AE T+ KV LS HIEKLM+ LKHEA KAKAHE R +E+ L++AR+ AL + ++D + EL EG+KILEDQLRLMDEKYMELRTKLD+TR K+V + +A AS+LR KWA S + LLD + + P S + S G Sbjct: 44 ASDDLTLLKAKAMSLLERQKNEKELRLRAEAATKASNKKVLALSQHIEKLMLHLKHEAASKAKAHEAAGRAAQEVSLLRARNAALGKRAASRDSIIKELTEGAKILEDQLRLMDEKYMELRTKLDFTRMTTGKEVTKYKALASSLRAKWAAYSNN--QGLLDELEM--PQQSPTGSQTG 218
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A7S2RYH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYH1_9STRA) HSP 1 Score: 134 bits (338), Expect = 5.430e-32 Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 2 Query: 1499 QLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGDS--SLLDTMRV 1957 QL+ER + EK RL+AE T+ K+ LS HIE+LM+ LKHEA KAKAHE R +E+ L++ R+ L + A+D+V ELREG+KILEDQLRLMDEKYMELRTKLD+TR + K+V + + QAS LR KWA+LS +LLD M V Sbjct: 1 QLLERQKAEKESRLRAEAATKLANKKILALSQHIERLMLHLKHEAASKAKAHEAAGRATQEVSLLRQRNGVLTKRAGARDQVIVELREGAKILEDQLRLMDEKYMELRTKLDYTRQASTKEVNKYKQQASHLRAKWALLSNAPGHVPTLLDEMPV 155
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A8J2SP64_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP64_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.490e-32 Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 1469 DIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGDSSLLDTMRVDPP 1966 D+ ALK KAT+L+ R + EK R KAE + + KV LSDH+EKLM+ LKHE KA+ +Q RR +K+L+ K RS L R N A+++ EL+EGSKILEDQL+LMD +Y+ELR KLDWTR A+ V+RA+ AS LR KWA+ + LLD +++ P Sbjct: 320 DVRALKHKATELLARGKAEKDQRQKAEAEAKLTGKKVAALSDHVEKLMVHLKHEVGAKAQVTDQLRRAEKDLDTAKLRSRTLARRNNAREKFVLELKEGSKILEDQLKLMDRRYLELRAKLDWTRQHAETQVKRAKKAASTLRAKWALATNSSQG-LLDEVQLPAP 484
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A812Y6I0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y6I0_SYMMI) HSP 1 Score: 136 bits (343), Expect = 2.620e-31 Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 1460 ATADIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGDSSLLD 1945 A DI ALK KA LVER+RQEK +L+ E + ++ A K+++LSDH+EKLM+ LKHEA K KA +Q R +K V+ + + R AKDR+ ELREGSKILEDQLRLMDEKY+ELRTKLD+ R A K VR A+ AS LR K+A+ G+ LLD Sbjct: 201 AAEDIRALKAKAISLVERIRQEKEDKLRIEGEQKQYAKKIEMLSDHVEKLMIHLKHEAAAKIKAVDQLRASEKRNRAVQDNLDLVSRKAAAKDRLIAELREGSKILEDQLRLMDEKYLELRTKLDYAREMAAKKVRNAQKTASELRVKFALA---GNQKLLD 359
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A7S2DJE2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJE2_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.890e-30 Identity = 82/173 (47.40%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 1469 DIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGDSSLLDTMRVDPPHLSHSSS 1987 D++ LK + LV+R RQEK R +AE T+ KV +LS H+EKLM+ LKHEA KAKA E R +E+ L++ R+ AL + +KD + EL EG+KILEDQLRLMDEKYME+RTKLD+TRT + ++V + + ++S LR KWA S ++LLD + + +S S Sbjct: 14 DLLNLKGRQAALVDRQRQEKENRSRAEAATKNAIKKVVLLSQHVEKLMLHLKHEAVSKAKAQEAAGRAAQEVSLMRTRNKALNKRAASKDVMIRELSEGAKILEDQLRLMDEKYMEIRTKLDFTRTTSTREVAKHKQESSVLRAKWAQYSNS--TTLLDDVGEEESGISMEKS 184
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: A0A5D6Y1X9_9STRA (JmjC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1X9_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.180e-26 Identity = 75/153 (49.02%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 1469 DIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDG 1927 + ALK KA +L R R EK +R K+E + + K+ LS+HIEK+M+ LKHEA KAKA + QRRL++EL K +S AL + + AKD EL +G++ILEDQLRLMDEK++++R KLDWTR + K+V++ + SALR KW + S G Sbjct: 812 EFQALKEKAVELASRERVEKELRQKSESGLSEASAKIVALSEHIEKVMVHLKHEAAAKAKAVDAQRRLERELAECKDKSAALQKRSAAKDAELQELEQGARILEDQLRLMDEKFIDVRNKLDWTRATSQKEVKKLAGELSALRMKWQLASDAG 964
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Match: H3GXL8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXL8_PHYRM) HSP 1 Score: 124 bits (310), Expect = 9.870e-26 Identity = 78/189 (41.27%), Postives = 116/189 (61.38%), Query Frame = 2 Query: 1436 LDVTAEGVATADIMALKIKATQLVERLRQEKAMRLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSNALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILSGDGDSSLLDTMRVDPPHLSHSSSAPGIG 2002 LD+ G+ D+ +++ K ++V R R EK +R K+E ++++ KV LS+H+EKLM+ LKHEA K +A E QRRL KEL K + +R + A+D EL +G++ILEDQLRLMDEK++++R KLDWTRT A K+ ++ A+ +LR KW + S G + L P + S P +G Sbjct: 332 LDIAQAGLR--DLQSMREKVVEVVGRERVEKELRAKSELANKELSEKVAALSEHVEKLMVHLKHEAAAKTRAVEAQRRLDKELVEAKDKLATAIRKHAAQDAQVAELEQGARILEDQLRLMDEKFIDVRNKLDWTRTAARKENKQLSAELRSLRMKWQMASDSGALAALPEW-ASPASMPRFSKKPPLG 517 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8497.17517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8497.17517.1 >prot_L-elsbetiae_contig8497.17517.1 ID=prot_L-elsbetiae_contig8497.17517.1|Name=mRNA_L-elsbetiae_contig8497.17517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=826bp MEQNTPNAGAVVSTSAEDGGDSVGQVMSNNQVEEDEEQEREDSAYGSGDFback to top mRNA from alignment at L-elsbetiae_contig8497:292..5091- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8497.17517.1 ID=mRNA_L-elsbetiae_contig8497.17517.1|Name=mRNA_L-elsbetiae_contig8497.17517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4800bp|location=Sequence derived from alignment at L-elsbetiae_contig8497:292..5091- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8497:292..5091- >mRNA_L-elsbetiae_contig8497.17517.1 ID=mRNA_L-elsbetiae_contig8497.17517.1|Name=mRNA_L-elsbetiae_contig8497.17517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4956bp|location=Sequence derived from alignment at L-elsbetiae_contig8497:292..5091- (Laminarionema elsbetiae ELsaHSoW15)back to top |