mRNA_L-elsbetiae_contig8496.17515.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.610e-97 Identity = 143/164 (87.20%), Postives = 158/164 (96.34%), Query Frame = 1 Query: 1 TGNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPSSMLKDMTEFPTGQSVHGGINYTESAYTELQEVIQPQGGDMV 492 TGNCVGARNYRAFMAFIILVTIS+SLVCAMSV+HTVTRTGHVGP++LTDS+NLPGSR VSPVLGMW AMIT+LVGALLCFH+YLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP+SML DM+EF TG +VHGG++YT +AYTELQEVI+PQGGD+V Sbjct: 660 TGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRLVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGHTVHGGVSYTANAYTELQEVIRPQGGDLV 823
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 242 bits (617), Expect = 6.450e-76 Identity = 111/123 (90.24%), Postives = 122/123 (99.19%), Query Frame = 1 Query: 1 TGNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPS 369 TGNCVGARNYR+FMAFIIL+TIS+SLVCAMSV+HTVTRTGHVGP++LTDS+NLPGSRFVSPVLG+W AMIT+LVGALLCFH+YLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP+ Sbjct: 314 TGNCVGARNYRSFMAFIILITISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPT 436
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 155 bits (391), Expect = 1.290e-43 Identity = 79/146 (54.11%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 1 TGNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVT-RTGHVGPLHLTDSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPSSMLKDMTEFPTGQSVHGGINYT 435 TGNC+GARNYRAFMAFI +VTIS CA+SVLH V R +VGP+ L + +PGS+F +L +W A++ +LVG LL FHI+L+AKGQTTNEYLR E G+ R F +C ELWCG +P S+L DMTE + GG + T Sbjct: 149 TGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNSAGGTDDT 294
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 131 bits (330), Expect = 6.860e-34 Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 1 TGNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLT----DSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPSSMLKDMTEFPTGQSVHGGINYTESAYTELQEVIQPQGGD 486 TGNC+G RNYR F F++ +T S++ V MS + + + D + G +F++P+L +W ++T LVGALL FHI LL +GQTTNEYLRGEK RG++PH + NC LWC P S L M E P + + A + LQE +Q + D Sbjct: 82 TGNCIGRRNYRFFYLFLMSITASSAYVLVMSANYLTRHLTDIDSKYFDAIFKDEWKIKGGQFIAPLLILWTLLVTTLVGALLVFHIILLGRGQTTNEYLRGEKNRGDIPHGNIFTNCGNLWCHDMPESRLLPMWEHPGKEDDDRNLKAAVDAMSSLQEAMQARTED 247
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 125 bits (315), Expect = 6.140e-32 Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 4 GNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKR--RGNVPHRSFGPNCRELWCGTQPSSMLKDMTEFPTGQSVHGGINYTESAYTELQE 462 GNC+G RNYR+F+ F+I++ +S +H +TR G+VGP LT +PGS +VSP LG+WA ++T +VG LL H+YLL +GQTTNE+L+GE RG V + C LWC P S+L E+PT V + L + Sbjct: 180 GNCIGHRNYRSFLRFLIVLAXXXXXXXXLSAIHALTRLGNVGPEDLTSQSGVPGSEYVSPFLGVWALLVTAIVGGLLLLHMYLLFQGQTTNEFLKGEPVHVRGRVMRK-----CLLLWCERLPPSLLPPFDEYPTQDDVDANAKRATATLESLSD 329
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A6H5LMK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMK7_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.020e-14 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 163 GSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 366 GS+FV +L +W A++ ILVG LLCFH++L+ K QTTN YLR E G+ R F +C ELW G +P Sbjct: 96 GSQFVPHLLALWTAVVMILVGGLLCFHVFLVTKSQTTNLYLRREAPSGSRLGRPFLASCHELWSGARP 163
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 70.9 bits (172), Expect = 2.360e-11 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 1 TGNCVGARNYRAFMAFIILVTISASLVCAMS---VLHTVTRTGHVGPL--HLTDSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPSSMLKDMTEFPTGQSVHGGINYTESAYTELQEVIQ 471 TG C+G RNY F FI L T+SA+ C+ S ++ H L ++ D V+P++ + ++ +LVG+LL FH++L+ + QTTNE+LRG + + S N +L + P S L M E + N A ++ I+ Sbjct: 217 TGTCIGVRNYAYFCVFITLATVSAAFACSTSAYLIVQWAEGRNHEPRLLMYIRD--------VVAPLVCAFTLLVFVLVGSLLAFHLFLIGRQQTTNEFLRGVRPSHSDYKNSTTGNVVKLCNTSIPDSKLLPMWEKCQADDIERSSNAVAQAINSMRSAIE 370
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 69.3 bits (168), Expect = 6.960e-11 Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 4 GNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSINLPGSRFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKR 300 G CVGARNYRAF+ F++ A VC+ + + V +H + G V+ + W+A++ + V L+ FH+YL+ QTTNEYLR E+R Sbjct: 160 GTCVGARNYRAFVLFLVWTLAGALYVCSRAARYLV----RCSTVHACSAYVDFGRPIVAGISVAWSAVVALPVATLIAFHLYLMGHDQTTNEYLRDERR 254
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A7R9UDC7_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.380e-10 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 4 GNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSINLPGS----RFVSPVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLRGEKRR 303 GNC+GARNYR F+ FII ++ V ++S+ ++ TG + + + PG+ R ++ VL W ++T LVGAL FH L+ GQTTNEY++ + R Sbjct: 249 GNCIGARNYRFFLLFIISTVLACVFVLSVSLYAFLSGTGGL----IVQVQDDPGADTVLRVLALVLVFWTFLLTALVGALTFFHCSLMCMGQTTNEYVKAARAR 348
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Match: A0A1I7RVI0_BURXY (Palmitoyltransferase n=2 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7RVI0_BURXY) HSP 1 Score: 67.8 bits (164), Expect = 3.600e-10 Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 4 GNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSINL-PGSRFVS--PVLGMWAAMITILVGALLCFHIYLLAKGQTTNEYLR-------GEKRRGNVPHRSFGPNCRELWCGTQPSSML 378 GNCVG RNYR F F++L+TI LV A S+ H + + + + ++IN PGS FVS ++ +W+ + L CFH YLLA QTTNE ++ G + NC C +P S++ Sbjct: 399 GNCVGLRNYRNFYLFVVLLTILDFLVGACSITHLIMLS--MEHRNFVEAINATPGSVFVSLVAIISVWSVL------GLSCFHTYLLASNQTTNEEVKDTFSDLLGSYCGSLYSTGNLFTNCLATLCAPEPPSLI 525 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8496.17515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8496.17515.1 >prot_L-elsbetiae_contig8496.17515.1 ID=prot_L-elsbetiae_contig8496.17515.1|Name=mRNA_L-elsbetiae_contig8496.17515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp TGNCVGARNYRAFMAFIILVTISASLVCAMSVLHTVTRTGHVGPLHLTDSback to top mRNA from alignment at L-elsbetiae_contig8496:296..3324+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8496.17515.1 ID=mRNA_L-elsbetiae_contig8496.17515.1|Name=mRNA_L-elsbetiae_contig8496.17515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3029bp|location=Sequence derived from alignment at L-elsbetiae_contig8496:296..3324+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8496:296..3324+ >mRNA_L-elsbetiae_contig8496.17515.1 ID=mRNA_L-elsbetiae_contig8496.17515.1|Name=mRNA_L-elsbetiae_contig8496.17515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=990bp|location=Sequence derived from alignment at L-elsbetiae_contig8496:296..3324+ (Laminarionema elsbetiae ELsaHSoW15)back to top |