mRNA_L-elsbetiae_contig8490.17510.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: D8LHS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHS7_ECTSI) HSP 1 Score: 305 bits (782), Expect = 1.550e-95 Identity = 188/342 (54.97%), Postives = 218/342 (63.74%), Query Frame = 3 Query: 192 MGNFLQGSARVLVQPPPPTLAIMPR-FPGFVARN--------VVH----------HRHPPAWSASHRSYGGKTRGFSSKKRPL------------GAPPEASRACPDPPR-PRHPEGGDFDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQ-PLPIPAGAAAAVTSDAV--SDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRRGVEACV 1112 MGN L R PP A++PR P FV+ + ++H HR P S S GG R F+ +++ L EASR CP+ R PR + D DA+ QATLRW+RSTVIGLNLCPWA GALVGG++RV+ HP Q PLP AA + + SD+ S G S + LLE LVEVA EA+ L L GEAA NATTLVVARPP A+ FEEFL V GAVD+F++ SGLRG VQLATFHPQYRFEGS+EDDASNYTNRSPYPVLHLLLEDQVSAAV Q+ D KVW RNV+TTRKLGVEAMRRGVEAC+ Sbjct: 1 MGNLLYSPLRGHATPPSAFSALVPRGLPAFVSSSSQVPPALLLLHPASTCKSPPRHRPPIRSSVSCGGCGGVGREFARRRKHLHRASADQSLLLCSLTTEASRPCPENTRSPR--QDRDSRGDAIAQATLRWIRSTVIGLNLCPWAAGALVGGQLRVLVHPAQQPLP-----AATDYQERLPGSDVGGGVSKDSGASSDAADLLEGLVEVATGEAVALSALGGEAAANATTLVVARPPLAQGFEEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVEQISDPAKVWERNVDTTRKLGVEAMRRGVEACL 335
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A1V3RSI3_9BURK (Peptidase n=2 Tax=unclassified Hydrogenophaga TaxID=2610897 RepID=A0A1V3RSI3_9BURK) HSP 1 Score: 134 bits (338), Expect = 4.990e-33 Identity = 85/212 (40.09%), Postives = 109/212 (51.42%), Query Frame = 3 Query: 450 DFDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQ-VGDAEKVWRRNVETTRKLGVE 1082 + DD V T RW+ VIGLNLCP+A V ++R++ + L DA D E DR L+ LV A+ A++ T LV P DFE F + +G VDD + L GTVQ+A+FHP ++FEG + DD SN TNR+PYP LHLL E+ V AVA GDAEK+ RN+ET R LG E Sbjct: 2 ELSDDTVLADTRRWIEKAVIGLNLCPFARSVYVKNQVRIVVSRARHL------------DAFLD-------------ELDRELDLLVNTPAE------------AIDTTLLV--HPTLFPDFEVFNDFMGVVDDVVAEHELEGTVQVASFHPLFQFEGVEPDDISNATNRAPYPTLHLLREESVERAVASDAGDAEKIVERNIETLRGLGAE 174
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A7S2XWH7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWH7_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.470e-32 Identity = 96/310 (30.97%), Postives = 149/310 (48.06%), Query Frame = 3 Query: 186 NFMGNFLQGSARVLVQPPPPTLAIMPRFPGFVARNVVHHRHPPAWSASHRSYGGKTRGFSSKKRP--LGAPPEASRACPDPPRPRHPEGGDFDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRRGVEAC 1109 + + +F+Q S V P ++MPR V+ +V+ H +P A+ +GG + S++ LG+ EA+ P +H V +AT+ WV+ VIGLNLCPWA L G+MR+ + S G H + + ++A+ + EG + T L V FE +L+ V V + LE GL+ +Q+ATFHP Y+F +DD N+TNRSPYP+LH LLED+VS AV D +K+W+RN+++ +K G M++ ++ C Sbjct: 9 SLVSSFIQQSIAFGVLGSAPR-SLMPRH--IVSTSVLGHGNPRAFQKRKLEFGGLPARYFSRRISWKLGSQKEAT---PSKITLKH----------VEEATMAWVKRVVIGLNLCPWAMPTLKDGKMRI----------------------------QVSQGQDHGAVLREVRRCVRKLASDHRLGQTREEGNPS---TVLFVCPQKMLARFEVYLDFVEMVQEMLEEEGLQDVLQVATFHPHYQFAEHGKDDVENFTNRSPYPILHFLLEDEVSEAVDNYSDTDKIWQRNIQSMQKAGTAEMKKVLKNC 271
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A7S3ZZK2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZK2_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.550e-32 Identity = 79/213 (37.09%), Postives = 110/213 (51.64%), Query Frame = 3 Query: 474 QATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRRGVEACV 1112 ++T +W+R V+GLNLCPWAG L G +R++ T+DA+ R R +++V A NAT + A FE++L++V AVDD ++++G RG +QLATFHP Y+F + ED AS++TNRSP+PVLHLL E V A+ + D VWRRNV LG E M R V C+ Sbjct: 38 KSTRKWIRDVVVGLNLCPWAGAPLQHGDLRIVES--------------TTTDALECAR--------------REFDAVV----------------ATENATVAIAISDACA--FEDYLDLVDAVDDAIDSAGHRGAIQLATFHPAYQFGDAPEDAASHWTNRSPFPVLHLLREADVERAL-ESKDGHDVWRRNVAAVEALGAENMERRVRDCL 203
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A0A0EXU2_9GAMM (Uncharacterized protein n=1 Tax=Lysobacter arseniciresistens ZS79 TaxID=913325 RepID=A0A0A0EXU2_9GAMM) HSP 1 Score: 128 bits (322), Expect = 7.950e-31 Identity = 82/209 (39.23%), Postives = 107/209 (51.20%), Query Frame = 3 Query: 456 DDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVE 1082 DDD AT RW++ VIGLNLCP+A V R+R + AA T DA LLE L A E L G++ E V TTL++ P DF+++ + + D ++ GL G +Q+A+FHP YRF GS +DD N TNRSPYP+LHLL E V AVA D + + RN+ET +LGVE Sbjct: 4 DDDDPIAATRRWLQRAVIGLNLCPFAKAVHVKDRIRYVVS------------AATTPDA--------------------LLEEL----ASELAWLAGIDAE--VVDTTLLI-HPQVLADFDDYNDFLDQADAAVDALGLEGEIQVASFHPDYRFAGSADDDPGNCTNRSPYPMLHLLREASVERAVAAFPDPDAIVERNIETMERLGVE 173
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A4Y6PNN2_9DELT (DUF1415 domain-containing protein n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PNN2_9DELT) HSP 1 Score: 127 bits (320), Expect = 1.510e-30 Identity = 80/206 (38.83%), Postives = 107/206 (51.94%), Query Frame = 3 Query: 459 DDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLG 1076 +D VT+ T RW+ VIGLNLCP+A V +R+ AV + R + E DRLL++ + A TTLVV P A DF+EFL+ V AVD+ +E +G G +QLA FHPQY+FEG++ DD N+TNR+PYP LHLL E Q+S VA + E + RN+E +LG Sbjct: 2 EDVVTK-TRRWLEDAVIGLNLCPFARAVYVRDEVRI---------------------AVDEARGFEDAIRRALDEADRLLQAAPDDIA-----------------TTLVV-FPHALSDFDEFLDAVDAVDELIERAGAAGILQLAHFHPQYQFEGTEADDLENFTNRAPYPTLHLLREAQISEGVASHPNPEAIPERNIEVLEELG 167
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: UPI001CB62791 (DUF1415 domain-containing protein n=2 Tax=Cupriavidus respiraculi TaxID=195930 RepID=UPI001CB62791) HSP 1 Score: 128 bits (321), Expect = 1.580e-30 Identity = 81/212 (38.21%), Postives = 110/212 (51.89%), Query Frame = 3 Query: 459 DDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRR 1094 +DAV AT W+ VIGLNLCP+A V ++R AV + R + + +LE L E TL E + A TTL++ P A DF E+ +V+ + L++ L GT+Q+A+FHP Y+F GSD DD NYTNR+PYP+LHLL ED ++ AV DA ++ RN ET R+LG E RR Sbjct: 11 NDAVIAATRHWLTRAVIGLNLCPFAKSVHVKDQVRY---------------------AVCEAR-----------DAEGVLEQLES----ELRTLA--EADPAQIDTTLLIV-PHALADFAEYNDVLYLAERLLQSLRLEGTLQIASFHPDYQFSGSDADDIENYTNRAPYPILHLLREDSIARAVEAFPDAADIYERNAETMRRLGHEGWRR 183
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A2G6YZZ0_9BURK (Uncharacterized protein n=3 Tax=Comamonas TaxID=283 RepID=A0A2G6YZZ0_9BURK) HSP 1 Score: 128 bits (321), Expect = 2.140e-30 Identity = 74/210 (35.24%), Postives = 113/210 (53.81%), Query Frame = 3 Query: 453 FDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVE 1082 F D V + T+RW+ VIGLNLCP+A G V G++ + A+ +++V++ + R LE+L E A++ TTL++ P A +DF +F + + D +E L G +Q+A+FHPQ++FEG+D DD +N TNR PYP+LHLL ED + AV +AE ++ RN+ET K+G+E Sbjct: 12 FPPDLVIEDTVRWLEKAVIGLNLCPFAKGVHVKGQIHYVVSE------------AMDAESVAE-------------DLHRELEALAEANAEK-------------RDTTLLI-LPHALQDFLDFNDFLEVADAMVEELDLGGILQVASFHPQFQFEGTDVDDVTNCTNRGPYPILHLLREDSIDKAVEVFPEAESIYERNMETLEKIGIE 182
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A2V7YM76_9BACT (DUF1415 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7YM76_9BACT) HSP 1 Score: 127 bits (319), Expect = 2.250e-30 Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 3 Query: 462 DAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRR 1094 + + +AT +W+ VIGLNLCP+A ++R V S A + + LL L++ E TL E E TTL++ P DF ++ + +G +D + GL G +Q+A+FHP Y+F G++ DD +NYTNRSPYP LHLL E V AVA V DA +++ RN+ET R+LGVE RR Sbjct: 6 EEIVKATRQWLEKAVIGLNLCPFAKPVHARDQIRY-----------------VVSQAETP---------------EELLADLID----ELQTLAAAEPEEIE--TTLLI-HPRVLNDFLDYNDFLGVAEDTVAGLGLEGVLQVASFHPDYQFAGTEPDDVTNYTNRSPYPTLHLLREASVERAVAAVPDAAEIYERNMETLRRLGVEGWRR 177
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A167H805_9BURK (Peptidase n=2 Tax=Hydrogenophaga crassostreae TaxID=1763535 RepID=A0A167H805_9BURK) HSP 1 Score: 126 bits (317), Expect = 3.920e-30 Identity = 79/213 (37.09%), Postives = 108/213 (50.70%), Query Frame = 3 Query: 459 DDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAV-AQVGDAEKVWRRNVETTRKLGVEAMRR 1094 D+ V T RW+ VIGLNLCP+A V ++R++ + L DA D E D L L + A+E V+ T LV P DF F + + VDD + GL G +Q+A+FHPQ++FEG + DD SN TNR+P+P+LHLL ED V A+ + GDAEK+ RN+ T R+LG E +R Sbjct: 5 DEQVLADTRRWIEKAVIGLNLCPFARAVYVKNQVRIVVSHARHL------------DAFLD-------------ELDAELTLLKDTPAEE------------VDTTLLV--HPSLFPDFMVFNDFLNVVDDVVAEHGLEGVIQVASFHPQFQFEGVEADDISNATNRAPFPILHLLREDSVERAIESDAGDAEKIVDRNIATLRELGAEGWKR 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8490.17510.1 >prot_L-elsbetiae_contig8490.17510.1 ID=prot_L-elsbetiae_contig8490.17510.1|Name=mRNA_L-elsbetiae_contig8490.17510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=328bp MGNFLQGSARVLVQPPPPTLAIMPRFPGFVARNVVHHRHPPAWSASHRSYback to top mRNA from alignment at L-elsbetiae_contig8490:4529..7655+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8490.17510.1 ID=mRNA_L-elsbetiae_contig8490.17510.1|Name=mRNA_L-elsbetiae_contig8490.17510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3127bp|location=Sequence derived from alignment at L-elsbetiae_contig8490:4529..7655+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8490:4529..7655+ >mRNA_L-elsbetiae_contig8490.17510.1 ID=mRNA_L-elsbetiae_contig8490.17510.1|Name=mRNA_L-elsbetiae_contig8490.17510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1968bp|location=Sequence derived from alignment at L-elsbetiae_contig8490:4529..7655+ (Laminarionema elsbetiae ELsaHSoW15)back to top |