mRNA_L-elsbetiae_contig8490.17510.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8490.17510.1
Unique NamemRNA_L-elsbetiae_contig8490.17510.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: D8LHS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHS7_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 1.550e-95
Identity = 188/342 (54.97%), Postives = 218/342 (63.74%), Query Frame = 3
Query:  192 MGNFLQGSARVLVQPPPPTLAIMPR-FPGFVARN--------VVH----------HRHPPAWSASHRSYGGKTRGFSSKKRPL------------GAPPEASRACPDPPR-PRHPEGGDFDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQ-PLPIPAGAAAAVTSDAV--SDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRRGVEACV 1112
            MGN L    R    PP    A++PR  P FV+ +        ++H          HR P   S S    GG  R F+ +++ L                EASR CP+  R PR  +  D   DA+ QATLRW+RSTVIGLNLCPWA GALVGG++RV+ HP Q PLP     AA    + +  SD+    S   G S +   LLE LVEVA  EA+ L  L GEAA NATTLVVARPP A+ FEEFL V GAVD+F++ SGLRG VQLATFHPQYRFEGS+EDDASNYTNRSPYPVLHLLLEDQVSAAV Q+ D  KVW RNV+TTRKLGVEAMRRGVEAC+
Sbjct:    1 MGNLLYSPLRGHATPPSAFSALVPRGLPAFVSSSSQVPPALLLLHPASTCKSPPRHRPPIRSSVSCGGCGGVGREFARRRKHLHRASADQSLLLCSLTTEASRPCPENTRSPR--QDRDSRGDAIAQATLRWIRSTVIGLNLCPWAAGALVGGQLRVLVHPAQQPLP-----AATDYQERLPGSDVGGGVSKDSGASSDAADLLEGLVEVATGEAVALSALGGEAAANATTLVVARPPLAQGFEEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVEQISDPAKVWERNVDTTRKLGVEAMRRGVEACL 335          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A1V3RSI3_9BURK (Peptidase n=2 Tax=unclassified Hydrogenophaga TaxID=2610897 RepID=A0A1V3RSI3_9BURK)

HSP 1 Score: 134 bits (338), Expect = 4.990e-33
Identity = 85/212 (40.09%), Postives = 109/212 (51.42%), Query Frame = 3
Query:  450 DFDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQ-VGDAEKVWRRNVETTRKLGVE 1082
            +  DD V   T RW+   VIGLNLCP+A    V  ++R++    + L            DA  D             E DR L+ LV   A+            A++ T LV   P    DFE F + +G VDD +    L GTVQ+A+FHP ++FEG + DD SN TNR+PYP LHLL E+ V  AVA   GDAEK+  RN+ET R LG E
Sbjct:    2 ELSDDTVLADTRRWIEKAVIGLNLCPFARSVYVKNQVRIVVSRARHL------------DAFLD-------------ELDRELDLLVNTPAE------------AIDTTLLV--HPTLFPDFEVFNDFMGVVDDVVAEHELEGTVQVASFHPLFQFEGVEPDDISNATNRAPYPTLHLLREESVERAVASDAGDAEKIVERNIETLRGLGAE 174          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A7S2XWH7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWH7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.470e-32
Identity = 96/310 (30.97%), Postives = 149/310 (48.06%), Query Frame = 3
Query:  186 NFMGNFLQGSARVLVQPPPPTLAIMPRFPGFVARNVVHHRHPPAWSASHRSYGGKTRGFSSKKRP--LGAPPEASRACPDPPRPRHPEGGDFDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRRGVEAC 1109
            + + +F+Q S    V    P  ++MPR    V+ +V+ H +P A+      +GG    + S++    LG+  EA+   P     +H          V +AT+ WV+  VIGLNLCPWA   L  G+MR+                            + S G  H      +   + ++A+   +     EG  +   T L V        FE +L+ V  V + LE  GL+  +Q+ATFHP Y+F    +DD  N+TNRSPYP+LH LLED+VS AV    D +K+W+RN+++ +K G   M++ ++ C
Sbjct:    9 SLVSSFIQQSIAFGVLGSAPR-SLMPRH--IVSTSVLGHGNPRAFQKRKLEFGGLPARYFSRRISWKLGSQKEAT---PSKITLKH----------VEEATMAWVKRVVIGLNLCPWAMPTLKDGKMRI----------------------------QVSQGQDHGAVLREVRRCVRKLASDHRLGQTREEGNPS---TVLFVCPQKMLARFEVYLDFVEMVQEMLEEEGLQDVLQVATFHPHYQFAEHGKDDVENFTNRSPYPILHFLLEDEVSEAVDNYSDTDKIWQRNIQSMQKAGTAEMKKVLKNC 271          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A7S3ZZK2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZK2_9STRA)

HSP 1 Score: 132 bits (331), Expect = 8.550e-32
Identity = 79/213 (37.09%), Postives = 110/213 (51.64%), Query Frame = 3
Query:  474 QATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRRGVEACV 1112
            ++T +W+R  V+GLNLCPWAG  L  G +R++                 T+DA+   R              R  +++V                A  NAT  +      A  FE++L++V AVDD ++++G RG +QLATFHP Y+F  + ED AS++TNRSP+PVLHLL E  V  A+ +  D   VWRRNV     LG E M R V  C+
Sbjct:   38 KSTRKWIRDVVVGLNLCPWAGAPLQHGDLRIVES--------------TTTDALECAR--------------REFDAVV----------------ATENATVAIAISDACA--FEDYLDLVDAVDDAIDSAGHRGAIQLATFHPAYQFGDAPEDAASHWTNRSPFPVLHLLREADVERAL-ESKDGHDVWRRNVAAVEALGAENMERRVRDCL 203          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A0A0EXU2_9GAMM (Uncharacterized protein n=1 Tax=Lysobacter arseniciresistens ZS79 TaxID=913325 RepID=A0A0A0EXU2_9GAMM)

HSP 1 Score: 128 bits (322), Expect = 7.950e-31
Identity = 82/209 (39.23%), Postives = 107/209 (51.20%), Query Frame = 3
Query:  456 DDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVE 1082
            DDD    AT RW++  VIGLNLCP+A    V  R+R +              AA T DA                    LLE L    A E   L G++ E  V  TTL++  P    DF+++ + +   D  ++  GL G +Q+A+FHP YRF GS +DD  N TNRSPYP+LHLL E  V  AVA   D + +  RN+ET  +LGVE
Sbjct:    4 DDDDPIAATRRWLQRAVIGLNLCPFAKAVHVKDRIRYVVS------------AATTPDA--------------------LLEEL----ASELAWLAGIDAE--VVDTTLLI-HPQVLADFDDYNDFLDQADAAVDALGLEGEIQVASFHPDYRFAGSADDDPGNCTNRSPYPMLHLLREASVERAVAAFPDPDAIVERNIETMERLGVE 173          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A4Y6PNN2_9DELT (DUF1415 domain-containing protein n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PNN2_9DELT)

HSP 1 Score: 127 bits (320), Expect = 1.510e-30
Identity = 80/206 (38.83%), Postives = 107/206 (51.94%), Query Frame = 3
Query:  459 DDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLG 1076
            +D VT+ T RW+   VIGLNLCP+A    V   +R+                     AV + R    +      E DRLL++  +  A                 TTLVV  P A  DF+EFL+ V AVD+ +E +G  G +QLA FHPQY+FEG++ DD  N+TNR+PYP LHLL E Q+S  VA   + E +  RN+E   +LG
Sbjct:    2 EDVVTK-TRRWLEDAVIGLNLCPFARAVYVRDEVRI---------------------AVDEARGFEDAIRRALDEADRLLQAAPDDIA-----------------TTLVV-FPHALSDFDEFLDAVDAVDELIERAGAAGILQLAHFHPQYQFEGTEADDLENFTNRAPYPTLHLLREAQISEGVASHPNPEAIPERNIEVLEELG 167          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: UPI001CB62791 (DUF1415 domain-containing protein n=2 Tax=Cupriavidus respiraculi TaxID=195930 RepID=UPI001CB62791)

HSP 1 Score: 128 bits (321), Expect = 1.580e-30
Identity = 81/212 (38.21%), Postives = 110/212 (51.89%), Query Frame = 3
Query:  459 DDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRR 1094
            +DAV  AT  W+   VIGLNLCP+A    V  ++R                      AV + R           + + +LE L      E  TL   E + A   TTL++  P A  DF E+ +V+   +  L++  L GT+Q+A+FHP Y+F GSD DD  NYTNR+PYP+LHLL ED ++ AV    DA  ++ RN ET R+LG E  RR
Sbjct:   11 NDAVIAATRHWLTRAVIGLNLCPFAKSVHVKDQVRY---------------------AVCEAR-----------DAEGVLEQLES----ELRTLA--EADPAQIDTTLLIV-PHALADFAEYNDVLYLAERLLQSLRLEGTLQIASFHPDYQFSGSDADDIENYTNRAPYPILHLLREDSIARAVEAFPDAADIYERNAETMRRLGHEGWRR 183          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A2G6YZZ0_9BURK (Uncharacterized protein n=3 Tax=Comamonas TaxID=283 RepID=A0A2G6YZZ0_9BURK)

HSP 1 Score: 128 bits (321), Expect = 2.140e-30
Identity = 74/210 (35.24%), Postives = 113/210 (53.81%), Query Frame = 3
Query:  453 FDDDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVE 1082
            F  D V + T+RW+   VIGLNLCP+A G  V G++  +               A+ +++V++             +  R LE+L E  A++               TTL++  P A +DF +F + +   D  +E   L G +Q+A+FHPQ++FEG+D DD +N TNR PYP+LHLL ED +  AV    +AE ++ RN+ET  K+G+E
Sbjct:   12 FPPDLVIEDTVRWLEKAVIGLNLCPFAKGVHVKGQIHYVVSE------------AMDAESVAE-------------DLHRELEALAEANAEK-------------RDTTLLI-LPHALQDFLDFNDFLEVADAMVEELDLGGILQVASFHPQFQFEGTDVDDVTNCTNRGPYPILHLLREDSIDKAVEVFPEAESIYERNMETLEKIGIE 182          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A2V7YM76_9BACT (DUF1415 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7YM76_9BACT)

HSP 1 Score: 127 bits (319), Expect = 2.250e-30
Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 3
Query:  462 DAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMRR 1094
            + + +AT +W+   VIGLNLCP+A       ++R                  V S A +                + LL  L++    E  TL   E E     TTL++  P    DF ++ + +G  +D +   GL G +Q+A+FHP Y+F G++ DD +NYTNRSPYP LHLL E  V  AVA V DA +++ RN+ET R+LGVE  RR
Sbjct:    6 EEIVKATRQWLEKAVIGLNLCPFAKPVHARDQIRY-----------------VVSQAETP---------------EELLADLID----ELQTLAAAEPEEIE--TTLLI-HPRVLNDFLDYNDFLGVAEDTVAGLGLEGVLQVASFHPDYQFAGTEPDDVTNYTNRSPYPTLHLLREASVERAVAAVPDAAEIYERNMETLRRLGVEGWRR 177          
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Match: A0A167H805_9BURK (Peptidase n=2 Tax=Hydrogenophaga crassostreae TaxID=1763535 RepID=A0A167H805_9BURK)

HSP 1 Score: 126 bits (317), Expect = 3.920e-30
Identity = 79/213 (37.09%), Postives = 108/213 (50.70%), Query Frame = 3
Query:  459 DDAVTQATLRWVRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSDIRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVARPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDASNYTNRSPYPVLHLLLEDQVSAAV-AQVGDAEKVWRRNVETTRKLGVEAMRR 1094
            D+ V   T RW+   VIGLNLCP+A    V  ++R++    + L            DA  D             E D  L  L +  A+E            V+ T LV   P    DF  F + +  VDD +   GL G +Q+A+FHPQ++FEG + DD SN TNR+P+P+LHLL ED V  A+ +  GDAEK+  RN+ T R+LG E  +R
Sbjct:    5 DEQVLADTRRWIEKAVIGLNLCPFARAVYVKNQVRIVVSHARHL------------DAFLD-------------ELDAELTLLKDTPAEE------------VDTTLLV--HPSLFPDFMVFNDFLNVVDDVVAEHGLEGVIQVASFHPQFQFEGVEADDISNATNRAPFPILHLLREDSVERAIESDAGDAEKIVDRNIATLRELGAEGWKR 178          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8490.17510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHS7_ECTSI1.550e-9554.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V3RSI3_9BURK4.990e-3340.09Peptidase n=2 Tax=unclassified Hydrogenophaga TaxI... [more]
A0A7S2XWH7_9STRA6.470e-3230.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3ZZK2_9STRA8.550e-3237.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0A0EXU2_9GAMM7.950e-3139.23Uncharacterized protein n=1 Tax=Lysobacter arsenic... [more]
A0A4Y6PNN2_9DELT1.510e-3038.83DUF1415 domain-containing protein n=2 Tax=Persicim... [more]
UPI001CB627911.580e-3038.21DUF1415 domain-containing protein n=2 Tax=Cupriavi... [more]
A0A2G6YZZ0_9BURK2.140e-3035.24Uncharacterized protein n=3 Tax=Comamonas TaxID=28... [more]
A0A2V7YM76_9BACT2.250e-3036.49DUF1415 domain-containing protein n=1 Tax=Acidobac... [more]
A0A167H805_9BURK3.920e-3037.09Peptidase n=2 Tax=Hydrogenophaga crassostreae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8490contigL-elsbetiae_contig8490:4529..7655 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.4
Seed ortholog evalue8.2e-81
Seed eggNOG ortholog2880.D8LHS7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1415)
EggNOG OGs2SA80@2759,COG3310@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF1415
Ec32 orthologEc-18_000300.1
Exons4
Model size1786
Cds size984
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8490.17510.1prot_L-elsbetiae_contig8490.17510.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8490 4720..7044 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816931.1192179-UTR-L-elsbetiae_contig8490:4528..47191622816931.1192179-UTR-L-elsbetiae_contig8490:4528..4719Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8490 4529..4719 +
1691683921.2672951-UTR-L-elsbetiae_contig8490:4528..47191691683921.2672951-UTR-L-elsbetiae_contig8490:4528..4719Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8490 4529..4719 +
1622816931.1751647-UTR-L-elsbetiae_contig8490:7044..76551622816931.1751647-UTR-L-elsbetiae_contig8490:7044..7655Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8490 7045..7655 +
1691683921.3165786-UTR-L-elsbetiae_contig8490:7044..76551691683921.3165786-UTR-L-elsbetiae_contig8490:7044..7655Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8490 7045..7655 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816931.1297643-CDS-L-elsbetiae_contig8490:4719..49261622816931.1297643-CDS-L-elsbetiae_contig8490:4719..4926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 4720..4926 +
1691683921.2784557-CDS-L-elsbetiae_contig8490:4719..49261691683921.2784557-CDS-L-elsbetiae_contig8490:4719..4926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 4720..4926 +
1622816931.1399996-CDS-L-elsbetiae_contig8490:5276..57651622816931.1399996-CDS-L-elsbetiae_contig8490:5276..5765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 5277..5765 +
1691683921.2875645-CDS-L-elsbetiae_contig8490:5276..57651691683921.2875645-CDS-L-elsbetiae_contig8490:5276..5765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 5277..5765 +
1622816931.1501966-CDS-L-elsbetiae_contig8490:6369..64801622816931.1501966-CDS-L-elsbetiae_contig8490:6369..6480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 6370..6480 +
1691683921.2966647-CDS-L-elsbetiae_contig8490:6369..64801691683921.2966647-CDS-L-elsbetiae_contig8490:6369..6480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 6370..6480 +
1622816931.1601048-CDS-L-elsbetiae_contig8490:6867..70441622816931.1601048-CDS-L-elsbetiae_contig8490:6867..7044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 6868..7044 +
1691683921.3059094-CDS-L-elsbetiae_contig8490:6867..70441691683921.3059094-CDS-L-elsbetiae_contig8490:6867..7044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8490 6868..7044 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8490.17510.1

>prot_L-elsbetiae_contig8490.17510.1 ID=prot_L-elsbetiae_contig8490.17510.1|Name=mRNA_L-elsbetiae_contig8490.17510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=328bp
MGNFLQGSARVLVQPPPPTLAIMPRFPGFVARNVVHHRHPPAWSASHRSY
GGKTRGFSSKKRPLGAPPEASRACPDPPRPRHPEGGDFDDDAVTQATLRW
VRSTVIGLNLCPWAGGALVGGRMRVIAHPPQPLPIPAGAAAAVTSDAVSD
IRARGSSGGGHSGEGDRLLESLVEVAAQEAMTLGGLEGEAAVNATTLVVA
RPPAAEDFEEFLEVVGAVDDFLENSGLRGTVQLATFHPQYRFEGSDEDDA
SNYTNRSPYPVLHLLLEDQVSAAVAQVGDAEKVWRRNVETTRKLGVEAMR
RGVEACVRGTAAEEGAEHEGSSGEIRR*
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mRNA from alignment at L-elsbetiae_contig8490:4529..7655+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8490.17510.1 ID=mRNA_L-elsbetiae_contig8490.17510.1|Name=mRNA_L-elsbetiae_contig8490.17510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3127bp|location=Sequence derived from alignment at L-elsbetiae_contig8490:4529..7655+ (Laminarionema elsbetiae ELsaHSoW15)
CTACGTTCTTGGGTTGAACTTCCTCAAGGAAACTGCCACAACAAGAACAG GAGGCAAACAAAATCAACCAAGCGATCCCGCCAAGGCACTCAGCAGTGTT CACGAAGAACCGAGGGAGGCATTTGAGAGGCGGCAGCACGCCTGTCAGAC TAGCTGTGTGAAAACCCAGAGAGGGAGAGGGCGATAATTTCATGGGGAAT TTCTTGCAGGGCTCGGCTAGAGTCCTCGTGCAACCACCACCGCCGACGCT TGCCATCATGCCTCGCTTTCCCGGCTTCGTAGCAAGGAACGTGGTGCATC ATCGCCATCCTCCTGCTTGGAGTGCCTCACACCGCAGCTATGGCGGCAAG ACGAGGGGGTTTTCCTCCAAGAAACGACCGCTCGGTGCACCGCCTGAGGT GTGTGCACATACGTTGGTTTCTTGTAGGTTTTTGAATGGGATTCGTTTCT GCCAATTGCTGGTTGTGTGATCGGCTCCGCGGGGCGTGCGGAAGCAAAAG GTGGCACGAACGATGGTACACGACGCAGCTCCTGAACAGAGAAAACCTTG GAGTGTAGGCTGCTGCTGCTGCTGCTGCTGCTGTAGACTGTGCAGTCGGT GAGAATGCGACCGACTGCAGAGGTTGGGTGCATGAGCGTTGAGGCACACT TGGGGGCGCTTCAAAATCCCTCCTACCGCCCCCTCTGGGAACCCTCTGCG TCTGCTGCTGCTGTTTCTCTCTGCACCCCCCTCCGCAACCGTGTGCAGGC CTCTCGTGCCTGCCCCGACCCCCCGCGCCCGCGTCACCCCGAGGGCGGCG ACTTCGACGACGACGCCGTGACGCAGGCCACCCTGCGCTGGGTTCGCTCC ACGGTGATCGGGCTTAACCTGTGCCCCTGGGCAGGGGGGGCCCTCGTCGG AGGCCGCATGCGAGTCATCGCGCACCCCCCTCAGCCTCTACCGATCCCCG CCGGCGCCGCTGCTGCTGTTACCAGCGACGCCGTCAGCGATATCAGAGCG CGGGGTTCCAGCGGCGGCGGTCACAGCGGGGAGGGAGACAGGCTTTTGGA GAGCCTCGTAGAGGTTGCGGCCCAGGAGGCAATGACACTGGGCGGTCTTG AGGGCGAAGCCGCGGTGAACGCGACCACCCTCGTGGTTGCGAGGCCGCCG GCGGCGGAGGACTTTGAGGAGTTTCTGGAGGTGGTGGGGGCAGTAGACGA CTTTCTCGAAAACTCGGGCCTGCGAGGCACGGTGCAGGTGGGAAGAGGCC CGACAGGCATCTATCTGTCTGTTGGTTTTGGGTGTCGTTTTTGTTGGTTA TTTTTGTCTGATGCGGGTGTTTCGGGTTCGGCAGGCGTCACTTATTTTCG CGATCGGCGCTCGATAGCCCGCCGCGGTCGTTCGGTTGGTAGTCTCGTAC ATACGTACACCTTCTGACACGGGAACGTTACGGTCGGTGCCTACCTGCTC TGGACGGGGAAAAAAAGCCCTTGACCAGCAGAAAGGCCCTTGTACAATCG TGGTTCTTGGAAATAAATCGAAAATACGAGGCTGATACACCCTTATGATT AACACATTTGAAGACAAGAACCCCAGGATAAGGGGAGGGGCATGGTCTGT GTATCCTCCGCTGTGTGCGCAAAGCTTTCCTAAACTGTTTTGACAGGCTT TTCAGAAATAGAGCGCGAAAAAACAAAGACGTGGTTGTGGTAGAACAGGC AGCATGTGGCAACACAGATTGTCGTTCTGCTCCTTATTCATTTCTCTATG TCTCCTGGAGGCCGGCATGTGACTGGACTAACTCCCCGCCCTCCTGGCGC TATGTTACCCCCTCACCCTTTCATTTTTATTTCTCTTTTAGCTGGCGACG TTTCACCCTCAGTATCGGTTCGAGGGATCCGATGAGGACGACGCGTCCAA CTACACCAATCGCTCCCCGTACCCCGTGCTGCATCTGCTGCTTGAAGACC AGGTGCGCAAGCACTGCGCCCCCCCAACACCCCCCCGTAGCGTACCTCAG CGTTGACACTACGTCTGTGGTGGGGGTGGTGTGACTGCCCGATCTTGTTT TGAGCACCTGGCACTTCTTCGCGCGAGAACAGTTGCCACGGCCGTGTTGC TGCCCATTCCGTTCGAATGGCACTTGTGTTTCGTGAGTGGTGTCGCTGCC GACCAAGGTTGTTAGATTGCCACCGCATTCCACCTCGGCCAACCACACTG GAACGCGTGGGGGAAATCGGCCCCTTACGCACCCACCCCTCTCGCGCGTG TTACGCTCACCCAAAACAAAACACACATCATACACACGCACACACACGCA CACACACACACACACACACACACATGTACGACCCTTCAGGTTTCGGCGGC GGTGGCTCAGGTCGGCGACGCGGAGAAGGTGTGGCGGAGGAACGTGGAAA CCACGCGAAAGCTGGGGGTGGAGGCGATGCGCAGAGGAGTGGAGGCGTGC GTGCGCGGGACGGCCGCGGAAGAGGGTGCTGAGCACGAGGGGAGTAGCGG GGAGATCCGTCGATAGCGCCAGCATCAACAGCAGCTGACAAGGCTACGCA CAACCTATGGCATGTTGCGCGTGTATCTCCATTTCATGTAATTCGAAGAA TTTTTTGGGTTATGTGCGTGGCCGCGGTATGTTGGGTCCAGGCGTGTATA CTGAGAATGCCCACGGCGACGACAGGACGGGGAAACGAGCGTCACGTCAG GGTTCTACGGCCAGTGACAGTTTCGTTTCGGGATAGTTGCCACGAGGTGG CGCGAAGTGTTCGGCGAGTCAGATGAAAACGGCGAGCCGCATGCCCGGGA ACAAGCAACTTGCAACTTTGGCATATATATGCGTCGGTACCGCGCGCCAT CGCCTGCATGGATGACAGAGTCATGAAACACGGTCCTCGTTGCGGAAGTG GGGAGTGGTTTAGAATATCTTAAGGATGCACCAGCCCAAGGAACGGGCGT GTTTGTGTGCAGGTTGCCGGCACATGTGTGCGTGTGTGTGTCCTTCCCAT TTATTTTGGCGACAGTCCCCCCAATTAGAGACGTGTACTACACCTTGCGG TGTACTTAGAGGTACTACACTTTGCAGTGCATTTGTCTGTACAACTAGAA CCAACCGGGGTCACACAGGAGGAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8490:4529..7655+

>mRNA_L-elsbetiae_contig8490.17510.1 ID=mRNA_L-elsbetiae_contig8490.17510.1|Name=mRNA_L-elsbetiae_contig8490.17510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1968bp|location=Sequence derived from alignment at L-elsbetiae_contig8490:4529..7655+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGAATTTCTTGCAGGGCTCGGCTAGAGTCCTCGTGCAACCACCACC
GCCGACGCTTGCCATCATGCCTCGCTTTCCCGGCTTCGTAGCAAGGAACG
TGGTGCATCATCGCCATCCTCCTGCTTGGAGTGCCTCACACCGCAGCTAT
GGCGGCAAGACGAGGGGGTTTTCCTCCAAGAAACGACCGCTCGGTGCACC
GCCTGAGATGGGGAATTTCTTGCAGGGCTCGGCTAGAGTCCTCGTGCAAC
CACCACCGCCGACGCTTGCCATCATGCCTCGCTTTCCCGGCTTCGTAGCA
AGGAACGTGGTGCATCATCGCCATCCTCCTGCTTGGAGTGCCTCACACCG
CAGCTATGGCGGCAAGACGAGGGGGTTTTCCTCCAAGAAACGACCGCTCG
GTGCACCGCCTGAGGCCTCTCGTGCCTGCCCCGACCCCCCGCGCCCGCGT
CACCCCGAGGGCGGCGACTTCGACGACGACGCCGTGACGCAGGCCACCCT
GCGCTGGGTTCGCTCCACGGTGATCGGGCTTAACCTGTGCCCCTGGGCAG
GGGGGGCCCTCGTCGGAGGCCGCATGCGAGTCATCGCGCACCCCCCTCAG
CCTCTACCGATCCCCGCCGGCGCCGCTGCTGCTGTTACCAGCGACGCCGT
CAGCGATATCAGAGCGCGGGGTTCCAGCGGCGGCGGTCACAGCGGGGAGG
GAGACAGGCTTTTGGAGAGCCTCGTAGAGGTTGCGGCCCAGGAGGCAATG
ACACTGGGCGGTCTTGAGGGCGAAGCCGCGGTGAACGCGACCACCCTCGT
GGTTGCGAGGCCGCCGGCGGCGGAGGACTTTGAGGAGTTTCTGGAGGTGG
TGGGGGCAGTAGACGACTTTCTCGAAAACTCGGGCCTGCGAGGCACGGTG
CAGGCCTCTCGTGCCTGCCCCGACCCCCCGCGCCCGCGTCACCCCGAGGG
CGGCGACTTCGACGACGACGCCGTGACGCAGGCCACCCTGCGCTGGGTTC
GCTCCACGGTGATCGGGCTTAACCTGTGCCCCTGGGCAGGGGGGGCCCTC
GTCGGAGGCCGCATGCGAGTCATCGCGCACCCCCCTCAGCCTCTACCGAT
CCCCGCCGGCGCCGCTGCTGCTGTTACCAGCGACGCCGTCAGCGATATCA
GAGCGCGGGGTTCCAGCGGCGGCGGTCACAGCGGGGAGGGAGACAGGCTT
TTGGAGAGCCTCGTAGAGGTTGCGGCCCAGGAGGCAATGACACTGGGCGG
TCTTGAGGGCGAAGCCGCGGTGAACGCGACCACCCTCGTGGTTGCGAGGC
CGCCGGCGGCGGAGGACTTTGAGGAGTTTCTGGAGGTGGTGGGGGCAGTA
GACGACTTTCTCGAAAACTCGGGCCTGCGAGGCACGGTGCAGCTGGCGAC
GTTTCACCCTCAGTATCGGTTCGAGGGATCCGATGAGGACGACGCGTCCA
ACTACACCAATCGCTCCCCGTACCCCGTGCTGCATCTGCTGCTTGAAGAC
CAGCTGGCGACGTTTCACCCTCAGTATCGGTTCGAGGGATCCGATGAGGA
CGACGCGTCCAACTACACCAATCGCTCCCCGTACCCCGTGCTGCATCTGC
TGCTTGAAGACCAGGTTTCGGCGGCGGTGGCTCAGGTCGGCGACGCGGAG
AAGGTGTGGCGGAGGAACGTGGAAACCACGCGAAAGCTGGGGGTGGAGGC
GATGCGCAGAGGAGTGGAGGCGTGCGTGCGCGGGACGGCCGCGGAAGAGG
GTGCTGAGCACGAGGGGAGTAGCGGGGAGATCCGTCGATAGGTTTCGGCG
GCGGTGGCTCAGGTCGGCGACGCGGAGAAGGTGTGGCGGAGGAACGTGGA
AACCACGCGAAAGCTGGGGGTGGAGGCGATGCGCAGAGGAGTGGAGGCGT
GCGTGCGCGGGACGGCCGCGGAAGAGGGTGCTGAGCACGAGGGGAGTAGC
GGGGAGATCCGTCGATAG
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