mRNA_L-elsbetiae_contig845.17457.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE) HSP 1 Score: 363 bits (932), Expect = 5.300e-110 Identity = 180/194 (92.78%), Postives = 188/194 (96.91%), Query Frame = 2 Query: 506 GSLLSSRGRALRPRQRRRAVRAVEQLRLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGWEH 1087 G+LLSSRGRAL PRQRR AVRAVEQLRLTSGSRCLESLY+GLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTD HVGYFWQALRRM REDR++FVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYD PD+YLPIAQTCFFSLALP+YSS +VCLEKLRYAIKNADLMDADYLVRSADGWE+ Sbjct: 8363 GALLSSRGRALSPRQRRLAVRAVEQLRLTSGSRCLESLYQGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDPHVGYFWQALRRMGREDRSSFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDDPDEYLPIAQTCFFSLALPKYSSVEVCLEKLRYAIKNADLMDADYLVRSADGWEN 8556
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI) HSP 1 Score: 346 bits (887), Expect = 5.680e-104 Identity = 170/183 (92.90%), Postives = 177/183 (96.72%), Query Frame = 2 Query: 539 RPRQRRRAVRAVEQLRLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGWEH 1087 R R RRRAVRAVEQLRLTSGSRCLESLY+GLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTD HVGYFWQALRRM REDR++FVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYD PD+YLPIAQTCFFSLALP+YSS +VCLEKLRYAIKNADLMDADYLVRSADGWE+ Sbjct: 7674 RRRTRRRAVRAVEQLRLTSGSRCLESLYQGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDPHVGYFWQALRRMGREDRSSFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDDPDEYLPIAQTCFFSLALPKYSSVEVCLEKLRYAIKNADLMDADYLVRSADGWEN 7856
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A835Z7P2_9STRA (Ubiquitin-protein ligase 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P2_9STRA) HSP 1 Score: 259 bits (663), Expect = 4.230e-83 Identity = 128/185 (69.19%), Postives = 149/185 (80.54%), Query Frame = 2 Query: 536 LRPRQRRRAVRAVEQLRLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPH-RDYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGWEH 1087 L P RRRAV AVE+ LT +RCLE LY G+A V+P ELL +FTA EAE LFCGVPEVDV+LL+R TEYEGV+PTD H+ +FW ALR MD DR A V FCSGR+RLP SAA+F MNF LTAPH ++RPDDYLP+AQTCFFSLALPRYSS + C KL YAI+NA+LMDADY++RSADGWE+ Sbjct: 5 LSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWEN 189
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A6A4ZAU4_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZAU4_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.620e-49 Identity = 86/162 (53.09%), Postives = 109/162 (67.28%), Query Frame = 2 Query: 608 LESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAP--HRDYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGWEH 1087 L S G+A VLP L +FT A+ E L CG P++D+D+LQR T YEGV T H+G+FWQ L+ M++ R+ FVNF RSRLP S EF ++FK+ D PD YLP +QTCFFSL LPRYSS D+C+EKL YAI N+ MDAD++ R + GWEH Sbjct: 136 LVSFMEGMAAVLPYALCTLFTPAQFEELVCGSPDIDIDMLQRITVYEGVDATAPHIGFFWQCLQDMNQAQRSLFVNFVLARSRLPRSIEEFTLHFKIQPAVIMGDDTNPDHYLPHSQTCFFSLCLPRYSSKDICMEKLLYAINNSPTMDADFVERGSAGWEH 297
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A7S2CPC5_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPC5_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.010e-48 Identity = 90/174 (51.72%), Postives = 110/174 (63.22%), Query Frame = 2 Query: 563 VRAVEQLRLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPHR-DYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGW 1081 V AV RL + L SL GLA VLPVEL VFTA E E L CGV EVDV+LL+ TEYE V ++ H+G+FW L M E+R + F RSR+P SA +F MNFKL P D PD +LP AQTCFFSL+LP+Y+S + KL +AI N+ MDAD + SA+GW Sbjct: 47 VEAVAACRLRESAPLLRSLRNGLASVLPVELFPVFTAEELEVLVCGVREVDVELLKSCTEYEEVDESEPHIGFFWDVLEEMRPEERTQLLKFVWARSRMPNSAKDFPMNFKLQGPPTGSQDDPDSWLPHAQTCFFSLSLPKYTSKETLRAKLLFAINNSPNMDADVRLHSAEGW 220
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A485KWW2_9STRA (Aste57867_12423 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWW2_9STRA) HSP 1 Score: 182 bits (461), Expect = 4.360e-47 Identity = 88/162 (54.32%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 608 LESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAP--HRDYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGWEH 1087 L S GLAGVLP LL +FT ++ + L CG PE+D+D+LQR T YEGV P H+ YFWQ L+ M R+AFVNF RSRLP S EF ++FK+ D PD YLP +QTCFFSL+LPRYSS ++C+EKL YAI N+ MDAD++ R + GWEH Sbjct: 4707 LRSFMEGLAGVLPFSLLNLFTPSQFDELICGSPEIDLDMLQRITVYEGVDPLAPHIQYFWQCLQDMTHVQRSAFVNFVLARSRLPRSIEEFTLHFKIQPAVITGDNSNPDQYLPHSQTCFFSLSLPRYSSKEICMEKLLYAITNSPTMDADFVERGSAGWEH 4868
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A1W0ACA4_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACA4_9STRA) HSP 1 Score: 181 bits (458), Expect = 9.710e-47 Identity = 91/168 (54.17%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 584 RLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDR--PDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGW 1081 RL L++L GLA VLP+E+ G+FTA E E L CG EVDV+LLQ+ TEYE V PT H+ YFW+ L M EDR F+ F RSR+P SA EF MNFK+ APH R PD YLP AQTCFFSL+LP YS+ ++ KL YAI+N+ MDAD + +A+GW Sbjct: 1578 RLNESGPQLQALKEGLASVLPMEMAGLFTARELEVLICGRREVDVNLLQQCTEYEDVDPTSAHIQYFWKVLHEMSSEDRTLFLRFVWARSRMPNSAKEFPMNFKIQAPHDQGARQLPDQYLPHAQTCFFSLSLPAYSTKEILQAKLLYAIQNSPNMDADVRLHNAEGW 1745
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A1V9Z9X1_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9X1_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.260e-45 Identity = 92/178 (51.69%), Postives = 117/178 (65.73%), Query Frame = 2 Query: 557 RAVRAVEQLRLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLT-APHRDYDRPDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGWEH 1087 R V A RL S + L L GLA V+P L +FT A+ E L CG PE+DVDLLQR T YEGV P + H+ +FW+ L M+ E R++FVNF RSRLP S EF ++FK+ A + PD YLP +QTCFFSL+LPRYSS +C+EKL YAI ++ MDAD++ R + GWEH Sbjct: 4722 RMVDACVAYRLDSQLKRLRPLMEGLATVVPHAALSLFTPAQLEELVCGSPEIDVDLLQRITVYEGVDPQEPHIQFFWECLSDMNHEQRSSFVNFVLARSRLPRSMEEFTLHFKIQPAMCAENTSPDIYLPHSQTCFFSLSLPRYSSKAICMEKLLYAIDHSPTMDADFVERGSAGWEH 4899
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: T0QV62_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QV62_SAPDV) HSP 1 Score: 177 bits (448), Expect = 2.280e-45 Identity = 90/168 (53.57%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 584 RLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDR--PDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGW 1081 RL S L++L GLA VLP+EL G+FTA E E L CG +VDV+LLQ+ TEYE V P H+ +FWQ L + EDR F+ F RSR+P SA EF MNFK+ APH R PD YLP AQTCFFSL+LP YS+ ++ KL YAI+N+ MDAD + +A+GW Sbjct: 3847 RLNESSPQLQALREGLASVLPMELTGLFTAREFEVLVCGRRQVDVNLLQQCTEYEDVDPQSDHIQFFWQVLHELSNEDRTLFLRFVWARSRMPNSAKEFPMNFKIQAPHDQGARQTPDAYLPHAQTCFFSLSLPAYSTKEILRAKLLYAIQNSPNMDADVRLHNAEGW 4014
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Match: A0A1V9ZRW4_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRW4_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.200e-45 Identity = 91/175 (52.00%), Postives = 115/175 (65.71%), Query Frame = 2 Query: 563 VRAVEQLRLTSGSRCLESLYRGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDTHVGYFWQALRRMDREDRAAFVNFCSGRSRLPGSAAEFAMNFKLTAPHRDYDR--PDDYLPIAQTCFFSLALPRYSSADVCLEKLRYAIKNADLMDADYLVRSADGW 1081 V + RL S L++L GLA VLP+E+ G+FTA E E L CG +VDV LL++ TEYE V PT HV +FW+ L M+ EDR F+ F RSR+P SA EF MNFK+ APH R PD YLP AQTCFFSL+LP YS+ ++ KL YAI+N+ MDAD + +A+GW Sbjct: 3798 VALATRKRLHESSAQLQALRDGLAAVLPMEMTGLFTAREFEVLVCGRRQVDVALLRQCTEYEDVDPTSAHVRFFWEVLEEMESEDRTLFLRFVWARSRMPNSAKEFPMNFKIQAPHDQGARQTPDAYLPHAQTCFFSLSLPAYSTKEILRAKLLYAIQNSPNMDADVRLHNAEGW 3972 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig845.17457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig845.17457.1 >prot_L-elsbetiae_contig845.17457.1 ID=prot_L-elsbetiae_contig845.17457.1|Name=mRNA_L-elsbetiae_contig845.17457.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=363bp RSSVAKPPQDAGQPRAFYVRFKGEGVDDHGGPYRAVFQTAMGEEPSGLLGback to top mRNA from alignment at L-elsbetiae_contig845:1610..2935+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig845.17457.1 ID=mRNA_L-elsbetiae_contig845.17457.1|Name=mRNA_L-elsbetiae_contig845.17457.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig845:1610..2935+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig845:1610..2935+ >mRNA_L-elsbetiae_contig845.17457.1 ID=mRNA_L-elsbetiae_contig845.17457.1|Name=mRNA_L-elsbetiae_contig845.17457.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2178bp|location=Sequence derived from alignment at L-elsbetiae_contig845:1610..2935+ (Laminarionema elsbetiae ELsaHSoW15)back to top |