mRNA_L-elsbetiae_contig8448.17456.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A6H5L312_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L312_9PHAE) HSP 1 Score: 370 bits (949), Expect = 7.100e-123 Identity = 174/195 (89.23%), Postives = 186/195 (95.38%), Query Frame = 1 Query: 1 VLAHASVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWESAHLR 585 VLAHASVWALTEYKRVV L+DNMLVVENIDDLF C GICAAMQQAEV+S+SLIVLEPDL++++HMS++VGTIY+FSNNFQGFLN+YLAGFETCA FDLENP LQDPSTDPNRGPDAPLLDHSCHRLPTRYNG+L LVMLNGGLGMVRTKN MPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVS WES HLR Sbjct: 160 VLAHASVWALTEYKRVVLLSDNMLVVENIDDLFLCEGICAAMQQAEVVSTSLIVLEPDLDIYQHMSRSVGTIYNFSNNFQGFLNTYLAGFETCAFFDLENPCLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGDLALVMLNGGLGMVRTKNAMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSTWESTHLR 354
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A835YXV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV5_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.990e-40 Identity = 76/188 (40.43%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 22 WALTEYKRVVFLADNMLVVENIDDLFQCPG-ICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGF-ETCALFDLENPSLQDPSTDPNRGPDAPL-LDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWESA 576 W L +Y+RVV L + L + N+DDLF CP +C + +E+ ++ +VL+P +H M + G + S F++ Y A C FD P G D +D +CHRLPTRY+G+L LV+LNGGL MVR +N MP+EWW RRAR+V F AGL P W ++PFLP W + Sbjct: 104 WLLNDYERVVLLGPDTLALANVDDLFTCPAALCFVVASSELAGAAALVLKPSASVHADMQRASGQLRPVSTTIAEFISVYTAPLLPQCTYFD------------PQSGYDEQAAIDTTCHRLPTRYSGDLLLVVLNGGLSMVRAQNKMPDEWWTARRARLVVFNLAGLTPAWWASAPFLPMTQIWHQS 279
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A836CGY7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY7_9STRA) HSP 1 Score: 119 bits (298), Expect = 8.870e-28 Identity = 65/208 (31.25%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 19 VWALTEYKRVVFLADNML-----------VVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALF-----DLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEE---WWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWESAHLR 585 ++ + EY ++VFL + L V+EN+D+LFQC CA M+Q E+++S ++V+EP+ +++R M + S++ QGFLNS+ + F C LF D + +P+ D G A C RLP+RYNG+ L ++ + RT++ +P W +++R +++ + F +PW W+ PFLP+V W + + + Sbjct: 112 IFNMVEYDKLVFLDSDTLQHHEIPQTAALVLENVDELFQCGPFCANMRQCELLNSGVLVVEPNADLYRDMHNKFAQLPSYTGGDQGFLNSWYSKFAECPLFEPYSEDAAPHAPNEPANDGGSGTGA-----HCWRLPSRYNGDWPLSFVDSPVQ--RTRHALPAAPPLWAKRKRVKIMHYTFGTGKPWNWWTYPFLPYVDKWAATYAK 312
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A251U7A3_HELAN (Hexosyltransferase n=3 Tax=Asteraceae TaxID=4210 RepID=A0A251U7A3_HELAN) HSP 1 Score: 114 bits (284), Expect = 5.170e-26 Identity = 64/186 (34.41%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 16 SVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWES 573 ++ +T+YK+VV+L + +VV+NIDDLF+C CA ++ +E ++S ++V+EP E+ + M V T+YS++ QGFLN+Y AGFE+ +FD P+ P P+ + RL T YN ++GL ML M +E + RV+ + L+PW W+ S L V W++ Sbjct: 115 KIFNMTDYKKVVYLDADTIVVKNIDDLFKCGKFCANLKHSERLNSGVMVVEPSEELFKDMVSKVTTLYSYTGGDQGFLNTYYAGFESARVFD--------PNISPEELKSKPVPE--MERLSTLYNADVGLYML--------ANKWMVDE----KELRVIHYTLGPLKPWDWWTSWLLKPVDVWQN 278
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A1Y1IBU6_KLENI (Glycogenin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBU6_KLENI) HSP 1 Score: 113 bits (283), Expect = 7.560e-26 Identity = 62/190 (32.63%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 16 SVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWESAHLR 585 +++ L EY+RV +L + +V+++IDD+F C G CA ++ +E ++S +V+EP E+ M + T S++ QGFLN Y F L+D E + D D + HRLPTR+NG++GL +LN MV RV+ F L+PW W+ + L V WE+ R Sbjct: 125 TIFNLVEYERVTYLDADTIVLKSIDDVFGCKGFCAVLRHSERLNSGFMVVEPSKELFADMMDKIATTPSYTGGDQGFLNEYYGNFINAPLYDPEFRPVTD--------------DETAHRLPTRFNGDVGLYVLNSNKWMVDDS-----------LLRVIHFTLGPLKPWDWWTAYILNPVDRWEAYRQR 289
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A2U1MMV5_ARTAN (Hexosyltransferase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MMV5_ARTAN) HSP 1 Score: 110 bits (274), Expect = 1.950e-25 Identity = 64/185 (34.59%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 16 SVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWE 570 ++ +T+YK+VV+L + +VV+NIDDLF+C CA ++ +E ++S ++V+EP E+ M V T+YS++ QGFLN+Y AGFE+ +F NP + S + P ++ RL T YN ++GL ML M +E + RV+ + L+PW W+ S L V W+ Sbjct: 117 KIFNMTDYKKVVYLDADTIVVKNIDDLFKCGKFCANLKHSERLNSGVMVVEPSAELFNDMVSKVTTLYSYTGGDQGFLNTYYAGFESARVF---NPEI---SAEVVNSKPVPEME----RLSTLYNADVGLYML--------ANKWMVDE----KELRVIHYTLGPLKPWDWWTSWLLKPVDVWQ 279
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A835XWQ0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XWQ0_9CHLO) HSP 1 Score: 112 bits (280), Expect = 1.950e-25 Identity = 60/189 (31.75%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 19 VWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWESAHLR 585 ++ +TEYK++VFL ++LV++N+D +F+CPG CAA++ +E +S ++ L P +E++ M V ++ S++ QGFLNSY +GF LFD D N PD + RLPT +N ++GL ++N G M+ + V+ + +PW+W++S + AW + R Sbjct: 120 IFKMTEYKKIVFLDGDILVMKNMDAIFKCPGFCAALRHSERFNSGVMTLVPSVELYDDMMSKVASMPSYTGGDQGFLNSYFSGFAHAPLFD----------PDTNYTPD----QYKYMRLPTVFNADIGLFVVNSGRWMLPRSS-----------LYVIHYTLGPFKPWLWWSSWLVREDPAWHAVRAR 283
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A2U1LAA3_ARTAN (Hexosyltransferase n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LAA3_ARTAN) HSP 1 Score: 110 bits (275), Expect = 9.050e-25 Identity = 64/186 (34.41%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 16 SVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWES 573 ++ +T+YK+VV+L + +VV+NIDDLF+C CA ++ +E ++S ++V+EP E+ M V T+YS++ QGFLN+Y AGFE+ +F NP + S + P ++ RL T YN ++GL ML M +E + RV+ + L+PW W+ S L V W++ Sbjct: 117 KIFNMTDYKKVVYLDADTIVVKNIDDLFKCGKFCANLKHSERLNSGVMVVEPSAELFNDMVSKVTTLYSYTGGDQGFLNTYYAGFESARVF---NPEI---SAEVVNSKPVPEME----RLSTLYNADVGLYML--------ANKWMVDE----KELRVIHYTLGPLKPWDWWTSWLLKPVDVWQN 280
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: UPI001CB9B3AE (inositol phosphorylceramide glucuronosyltransferase 1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B3AE) HSP 1 Score: 109 bits (272), Expect = 2.320e-24 Identity = 64/185 (34.59%), Postives = 99/185 (53.51%), Query Frame = 1 Query: 16 SVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWE 570 ++ +T+YK+VV+L + +VV+NIDDLF+C CA ++ +E ++S ++V+EP E+ + M V T+YS++ QGFLNSY GFE+ +FD P + + PD RL T YN ++GL ML MV K RV+ + L+PW W+ S + V W+ Sbjct: 115 KIFNMTDYKKVVYLDADTIVVKNIDDLFKCGKFCANLKHSERLNSGVMVVEPSEELFKDMVSKVTTMYSYTGGDQGFLNSYYTGFESARVFD---PKISAEVVNSKPVPD-------MERLSTLYNADVGLYML-ANKWMVDAKE-----------LRVIHYTLGPLKPWDWWTSWLVKPVDVWQ 277
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Match: A0A2G9GVE2_9LAMI (Hexosyltransferase n=2 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GVE2_9LAMI) HSP 1 Score: 107 bits (268), Expect = 8.210e-24 Identity = 61/190 (32.11%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 16 SVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSSLIVLEPDLEMHRHMSQTVGTIYSFSNNFQGFLNSYLAGFETCALFDLENPSLQDPSTDPNRGPDAPLLDHSCHRLPTRYNGELGLVMLNGGLGMVRTKNNMPEEWWRQRRARVVRFEFAGLRPWMWFASPFLPFVSAWESAHLR 585 ++ LT YK+VV+L + +VV+NIDDLF+C CA ++ +E ++S ++V+EP ++ + M V T+YS++ QGFLNSY F +FD P+ P P+ RL T YN ++GL ML M +E + RV+ + L+PW W+ + V W++A ++ Sbjct: 114 KIFNLTNYKKVVYLDADTIVVKNIDDLFKCHKFCANLKHSERLNSGVMVVEPSEKLFKDMMTKVSTMYSYTGGDQGFLNSYFPDFANARIFD--------PNASPEELKSRPIPQ--MERLSTLYNADVGLYML--------ANKWMVDE----KELRVIHYTLGPLKPWDWWTHWLVKPVDVWQNARIK 281 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8448.17456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8448.17456.1 >prot_L-elsbetiae_contig8448.17456.1 ID=prot_L-elsbetiae_contig8448.17456.1|Name=mRNA_L-elsbetiae_contig8448.17456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp VLAHASVWALTEYKRVVFLADNMLVVENIDDLFQCPGICAAMQQAEVMSSback to top mRNA from alignment at L-elsbetiae_contig8448:2299..8555+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8448.17456.1 ID=mRNA_L-elsbetiae_contig8448.17456.1|Name=mRNA_L-elsbetiae_contig8448.17456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6257bp|location=Sequence derived from alignment at L-elsbetiae_contig8448:2299..8555+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8448:2299..8555+ >mRNA_L-elsbetiae_contig8448.17456.1 ID=mRNA_L-elsbetiae_contig8448.17456.1|Name=mRNA_L-elsbetiae_contig8448.17456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig8448:2299..8555+ (Laminarionema elsbetiae ELsaHSoW15)back to top |