mRNA_L-elsbetiae_contig8406.17419.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: D8LBQ9_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ9_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 1.340e-148 Identity = 287/545 (52.66%), Postives = 343/545 (62.94%), Query Frame = 1
Query: 1 IALRARCQEALGFLHFVKRVREEKREDAAAXX---AAGHGWDWVEDNCRCVFDLLASVPAIRALDLVFRRKLLWMLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGNLLPENRLATATCLRPCSLLRVDGITFRQALDDPEAHHVIEKKIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKAFLPFPRGQARDG-----------------PSEERTATETGAKGGETQEEHASGRLRQKRRLQKRPSGTPRVSPGAPLSSPNN-SRNVATSVDDSGGSXXXXXXXXXXPARASQPPQEGPPSSXXXXXXPIKVRHFEIGVAGRKEFIGEGGFTSAALAGAGALGAAGSGXXXXXXXXXXXXXXXXXRHRVNGEGGGXXXXXGRHG--SSAGRDSPGQSQHGH----FSRVGGNYLVSAVAERRADVFAAKVSRLWPMQTPAIKLCWIEGREVHGMKEREWNVEALASKLRGQAAWDSAKRAIVLDNVRTDVLARRM 1554
IA+RARCQEAL FL +V+RV EEK EDAAAXX AAGHGWDWVE+NCRCVFDLL +VP I +LD VFRRKLLWMLD+ +R++GQ+LFRQGD QET+WLILDGR+ V DKQG+VH G++N G V+G++LPE RLATA CL C+LL++D TF QAL+DPEA + KK FFRSVSLFKGLGERDLDRL + F TLEAGDVLCREGERVDYLYLV+RGN RLLKAF+P P DG P+ + E A G E + R+ GA + + XXXXXXXXXX Q E P +VR+F++GV GR+EF+GEGGFTSAA AGAGAL AAG R+ G G G G G + R S S H + SR+GG+YLVSA AE RAD+FAAKV L+P+Q+ A+KLCWIEGREVH MKEREW ALA++LR Q AW+ KRAIV+D++R VL +RM
Sbjct: 2 IAMRARCQEALSFLRYVRRVLEEKGEDAAAXXXXXAAGHGWDWVEENCRCVFDLLGAVPLIGSLDPVFRRKLLWMLDLANRQEGQILFRQGDKQETLWLILDGRIGVRSTDKQGVVHYTGEFNSGHVIGSILPEKRLATAICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD----DGXXXXXXXXXXXXXXXXVPARQXXRAEDKA-GSELESXXXXXXXXXXXXXXXXXXXXXRI--GADATQRREWTHEXXXXXXXXXXXXXXXXXXXXXXXXXPQQRAEAP-----------RVRYFDLGVVGRREFVGEGGFTSAAFAGAGALKAAGG-----MAGEDVRDGGSVKGRRLGGVGPGSAAAGGEDGPGGAGARRSVWSSCHKNRGRVVSRIGGDYLVSAFAEGRADIFAAKVGHLFPLQSAALKLCWIEGREVHKMKEREWKAGALAARLRKQIAWERTKRAIVMDSIRIGVLEKRM 523
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: A0A6H5JUG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG7_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 3.210e-134 Identity = 280/630 (44.44%), Postives = 339/630 (53.81%), Query Frame = 1
Query: 1 IALRARCQEALGFLHFVKRVREEKREDAAAXXA---AGHGWDWVEDNCRCVFDLLASVPAIRALDLVFRRKLLWMLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPG------------------------------------------QVLGNLLPENRLATATCLRPCSLLRVDGITFRQALDDPEAHHVIEKKIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKAFLPFPRGQARDG-----------------PSEERTATETGAKGGETQEEHASGRLRQ-----------------------------------KRRLQKRPSGTPRVSPGAPLSSPNNSRNVATSVDDSGGSXXXXXXXXXXPARASQPPQEGPPSSXXXXXXPIKVRHFEIGVAGRKEFIGEGGFTSAALAGAGALGAAGSGXXXXXXXXXXXXXXXXXRHRVNGEGGGXXXXXGRHGSSAG--RDSPG---------QSQHGH----FSRVGGNYLVSAVAERRADVFAAKVSRLWPMQTPAIKLCWIEGREVHGMKEREWNVEALASKLRGQAAWDSAKRAIVLDNVRTDVLARRM 1554
IA RARC EAL FL +V++V EEK EDAA XX AGHGWDWVE+NCRCVFDLL +VP IR+LD VFRR+LLWMLD+ +R++GQ+LFRQGD QE +WLILDGR+ V DKQG+VH G++N G QV+G++LPE RLAT CL C+LL++D TF QAL+DPEA + KK FFRSVSLFKGLGERDLDRL + F TLEAGDVLCREGERVDYLYLV+RGN RLLKAF+P P P+ +R E A G E + ++R + G R S A + N + N+A DS P+ AS P P++VR+F++GV GR+EFIGEGGFTSAA AGAGAL AAG R G G R GS+A D PG S H + SR+GG+YLVSA AE R D+FAAKV L P+Q+ A+KLCWIEG E H MKEREW +ALA+KLR Q W+ KRAIV+D++R VL +RM
Sbjct: 2 IARRARCLEALRFLRYVRKVLEEKGEDAAXXXXXXXAGHGWDWVEENCRCVFDLLGAVPLIRSLDPVFRRRLLWMLDLANRQEGQILFRQGDKQEALWLILDGRIGVRSTDKQGVVHHTGEFNSGHVENLNRVVRVWRADHGFVGWSERVGSTDGKSPQLSQTPPSTQVVGSILPEKRLATVICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPDDXXXXXXXXXXXXXXXXXXXXGVPARQRRRAEDKA-GSELESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXQQRAEAPRRGVARKSLSA---TSNENANIANG--DSCRRSSGPGAQQALPSSASPSPSS----------PPMRVRYFDLGVVGRREFIGEGGFTSAAFAGAGALKAAGGMVGEDV--------------RDGGSMKGRRLEGARPGSAAAGEEDGPGGARVRRSVWSSCHKNRGVVVSRIGGDYLVSAFAEGRVDIFAAKVCHLLPLQSAALKLCWIEGCEAHKMKEREWKADALAAKLRKQIVWERTKRAIVMDSIRIGVLEKRM 601
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: D7FJW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.410e-24 Identity = 62/183 (33.88%), Postives = 104/183 (56.83%), Query Frame = 1
Query: 142 VFDLLASVPAIRALDLVFRRKLLWMLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGNLLPENRLATATCLRPCSLLRVDGITFRQALDDPEAHHVIEKKIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKAFLP 690
VFD+ SVP + +LD +++++L + G +FRQ + Q+ + +IL GRV + K G++ G N G+V+G++ P + TA C ++L + +F ++D + KK F + ++F L + DL+ + F VTL V+C+EG RVD++Y+V+RG R+LKAFLP
Sbjct: 99 VFDMFNSVPEVTSLDSIYKKQLFREFQLRHFAAGSTIFRQWEHQDKICVILRGRVHLTSKHS-GVLFQAGTCNVGEVIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLP 280
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: A0A2V8JTZ0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8JTZ0_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 1.430e-11 Identity = 51/189 (26.98%), Postives = 92/189 (48.68%), Query Frame = 1
Query: 154 LASVPAIRALDLVFRRKLLWMLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGN---LLPENRLATATCLRPCSLLRVDGITF-RQALDDPEAHHVIEK---------KIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKA 681
LA+ R LD ++ L++++ KG+ LFRQGD+ + ++++++G ++ + G + PG+++G L R A+ + +LLR+ TF R A D + I++ K+ R LF L + L ++ A E + L G+ L R+GE D LY++ G R++ A
Sbjct: 15 LAATELFRRLDRKVLEEIAVDLELINLSKGEALFRQGDVSDAMYVVINGGLQAAIAQENGDARVVSEVGPGELVGEIAILTGGMRTASLYAVSDTALLRLSKTTFDRLAAQDVQTRAQIDQIILQRLRRDKLAARLFDLFGPLDKAALQQVEAEIEWIDLPRGEALVRQGEAGDRLYILISGRLRVVVA 203
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: UPI0019B914C3 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019B914C3) HSP 1 Score: 72.8 bits (177), Expect = 1.220e-10 Identity = 50/169 (29.59%), Postives = 84/169 (49.70%), Query Frame = 1
Query: 217 LDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGN---LLPENRLATATCLRPCSLLRVDGITFRQALDDPEAHH--VIEKKIFF----------RSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLK 678
L +VS +G++LFRQGD + +++I++G V V + + + PG LG + + R AT C+ LLR+D T + L A+H V+ + F R+ LF+ + LAA F+ + ++AG ++ G+R D LY+V G F +L+
Sbjct: 10 LQLVSLERGELLFRQGDRSDALYVIVEGEVSVVGEGPPRVEM--SRLGPGAFLGEVALMTDQPRSATVVCVASAELLRIDRHTLSRVL----ANHGDVLRAVLRFVRDRLVDRWMRTSPLFRPFNDAQRIELAAKFKFLEIDAGTIILGTGQRPDGLYIVLAGEFLVLR 172
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: A0A6P8H5S5_ACTTE (cGMP-dependent protein kinase n=4 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H5S5_ACTTE) HSP 1 Score: 66.6 bits (161), Expect = 1.110e-7 Identity = 49/180 (27.22%), Postives = 84/180 (46.67%), Query Frame = 1
Query: 148 DLLASVPAIRALDLVFRRKLLWMLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGNLLPE---NRLATATCLRPCSLLRVDGITFRQALDDPEAHHVIEKKIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLK 678
D + ++ L+ R+++ + S K +V+ R+GD +++I +GR++V KD + + G+ G V G L R AT + +L + D F+ + E F +SV L K L + L +LA E+ AGD + REGER D Y++ +G R+ +
Sbjct: 157 DAIYENDFLKNLEAAQVREIVECMSPQSCDKEEVIIREGDAGNALYVIAEGRLDVT-KDGEVL----GEMCGGMVFGELAILYNCRRTATVRAIEATTLWKTDRKMFQMIMMRTGMIRQAEHISFLKSVPLLKNLPSQHLSKLADVLEVDFYHAGDYIIREGERGDTFYIISKGTARVTQ 331
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: A0A3E0PM49_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3E0PM49_9ACTN) HSP 1 Score: 65.5 bits (158), Expect = 1.220e-7 Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 1
Query: 226 VSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGNLLP---ENRLATATCLRPCSLLRVDGITFRQALD-DPEAHHVI--------EKKIFFRSVSLFKGLGER-DLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKA 681
V +G+ L QGD +TV+L++DG ++V + PG ++G ++ R AT T P L+ VD F++ L +PE ++ E+ ++ GL +R L ++ E TL AGDVL REG+ D++Y V RG +A
Sbjct: 31 VRLNRGETLIAQGDASDTVYLLIDGSLQVSRDVDEATAVIAEISEPGSLIGEMVAIGGGRRTATVTSTSPSELIAVDVDDFQRLLQQEPELTDLLVTVAIRRAEEAELVELLARHFGLVDRATLIATCSSVEWRTLAAGDVLFREGDPSDFVYFVVRGRLITTRA 195
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: Q22UJ2_TETTS (Cyclic nucleotide-binding domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22UJ2_TETTS) HSP 1 Score: 66.2 bits (160), Expect = 1.740e-7 Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = 1
Query: 238 KGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIV-HPGGKYNP-------------------GQVLGNLL---PENRLATATCLRPCSLLRVDGITFRQALDDPEAHHVIEKKIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKAF 684
+G ++F+QGD + +LIL G+V+V K+ + +P K + G+ G L + R AT C+ C + + I+F + L D E + + + LFK L L F + + + GDV+ REG+ D LY++ G F++ K F
Sbjct: 104 RGDIVFKQGDQGDKFYLILRGQVKVLVSVKRQLQQNPQEKADKNKKVKNEKEEQLEIKVLKSGETFGELAIIDSKPRGATIVCMEDCDFIVFEKISFIKILKDQETEKLRNEINQLTKIYLFKDFSLNLLKNLYLLFSVNSYQRGDVIYREGDESDKLYIIREGEFKVSKKF 275
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: A0A7J5EZ74_9DELT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7J5EZ74_9DELT) HSP 1 Score: 62.4 bits (150), Expect = 3.970e-7 Identity = 51/163 (31.29%), Postives = 74/163 (45.40%), Query Frame = 1
Query: 205 LLWMLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPGQVLGNLL---PENRLATATCLRPCSLLRVDGITFRQALDD-PEAHHVIEKKIFFRSVS-------LFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERG 660
L+ L +V GQVLFRQGD + ++++ +G V V + H ++ PG G + E R AT T LL VD R + D P+ VI + + R V LF G D + L A F+ + ++ G V+ REG R LY + G
Sbjct: 1 LIERLGLVELTAGQVLFRQGDAGDALYVVAEGTVVVHSEGPPR--HELTRFGPGSFFGEVALVTEEPRSATVTAQVDTQLLAVDREAVRMLVADFPDVLPVILRFLRERLVDRLVQTHPLFASFGAGDREYLVAQFKFLEIDPGSVIVREGGRPAGLYAILSG 161
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Match: A0A165CTG7_9BASI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165CTG7_9BASI) HSP 1 Score: 63.5 bits (153), Expect = 4.690e-7 Identity = 48/178 (26.97%), Postives = 79/178 (44.38%), Query Frame = 1
Query: 226 VSRRKGQVLFRQGDLQETVWLILDGRVEVCFKD----KQGIVHPGGKYN------------------PGQVLGNL-LPEN--RLATATCLRPCSLLRVDGITFRQALDDPEAHHVIEKKIFFRSVSLFKGLGERDLDRLAAAFELVTLEAGDVLCREGERVDYLYLVERGNFRLLKAF 684
V G V+ +QGD + ++I G + D K+ + G+ + PG ++G L L N R AT + C L +D +TFR L + + F SV +FKGL + + R+A A E+VT++ G + ++G+ D Y++E G + K F
Sbjct: 95 VEAENGHVIIKQGDPGDFCYVIETGECHIYIVDFDEEKEDTLAAQGEPDIDDTIEKTRYGTCVTIAKPGDIVGELALMYNAPRAATVVAVEHCVLWALDRLTFRTILLETTTKKRRMHEQFLASVPIFKGLSQYERFRIADALEVVTVDKGKYVFKQGDMGDRFYIIESGKAAVEKTF 272 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8406.17419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8406.17419.1 >prot_L-elsbetiae_contig8406.17419.1 ID=prot_L-elsbetiae_contig8406.17419.1|Name=mRNA_L-elsbetiae_contig8406.17419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=465bp MLDVVSRRKGQVLFRQGDLQETVWLILDGRVEVCFKDKQGIVHPGGKYNPback to top mRNA from alignment at L-elsbetiae_contig8406:3630..8486+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8406.17419.1 ID=mRNA_L-elsbetiae_contig8406.17419.1|Name=mRNA_L-elsbetiae_contig8406.17419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4857bp|location=Sequence derived from alignment at L-elsbetiae_contig8406:3630..8486+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8406:3630..8486+ >mRNA_L-elsbetiae_contig8406.17419.1 ID=mRNA_L-elsbetiae_contig8406.17419.1|Name=mRNA_L-elsbetiae_contig8406.17419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2790bp|location=Sequence derived from alignment at L-elsbetiae_contig8406:3630..8486+ (Laminarionema elsbetiae ELsaHSoW15)back to top |