mRNA_L-elsbetiae_contig84.17412.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig84.17412.1
Unique NamemRNA_L-elsbetiae_contig84.17412.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 2.920e-213
Identity = 348/389 (89.46%), Postives = 364/389 (93.57%), Query Frame = 1
Query:    1 MSAVEPSMNGKATLGGMSRGPGVGGDGAAEQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGAAETARRREDEHAGASPVQLLRRVREGGMWWLLVVYDDEYETQGWKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXX--EAVASLMKKYQDLKEEYRLYRKKAMHAIQGAXXXXXXXXXXLESQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQ 1161
            MS VEPS NGKA + G+SRGPG GGDG AEQENVQ+TLAKFKRLLSLARRSIEENQRQITEKDGQ++ALREALGAAE ARRR+DEHAGA+P+QLLRRVREGGMWWLLV YDDEYETQGWKGFADEAAVS FA   NVGEPL IPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGA  +KEQV ALEDELQR+R+EL DKEE+WR AYQKQV+ETE+LKREGGDTALAAQWRQRYEKLSLEKEDA+AKL+M KGDG XXXXXXXXXXXXX  EAVASLMKKYQDLKEEYRLYRKKAMHAIQGA XXXXXXXX LE QDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQ
Sbjct:    1 MSVVEPSTNGKAAMAGVSRGPGGGGDGTAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGATPLQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEAAVSEFANSVNVGEPLNIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAVDKEQVHALEDELQRVRDELTDKEESWRQAYQKQVKETEVLKREGGDTALAAQWRQRYEKLSLEKEDAVAKLDMLKGDGGXXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQGAGXXXXXXXXGLELQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQ 389          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: A0A7S2S2V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2V8_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.400e-61
Identity = 159/422 (37.68%), Postives = 225/422 (53.32%), Query Frame = 1
Query:   37 TLGGMSRGPGVGGDGAAEQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGAAETARRR----------------------EDEHAGAS------PVQLLRRVREGGMWWLLVVYDDEYETQGWKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQ---------GAXXXXXXXXXXLES-----------QDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSE 1158
            T GG    P   GD AA+Q N      ++KRLL  +R+ +E  Q+++ EK+  +  L   L      R+                       E   +GA       P + LRRV   G   + V+++ E     W+ F ++  +S F    + GEPL +P   L+PEES  V E+A+  VA I EE+R+FRV++E+ RKQ++AE RQ +A SIAE+QRRI+GQ   +  ++ +   +++ +LR +L D+EE WR    K  +E E L+ EG + ALAAQWRQRYE+ S EK + +AKL +                      +SL+K+Y+DL+EEY+LYRK+AM AIQ         GA                        +DP+ QYLKNLM+KYL TDE EAREHMERA+ TVLQFS+
Sbjct:   21 TPGGGPATPAAPGDKAAQQIN------QYKRLLIQSRQMLENYQKKLQEKERIVEHLAHELQTTRQQRQSAXXXXXXXXXXXXXXXXXASTAEPHPSGAGDSRKAVPHRALRRVDVNGG--ISVLFEFETGEDQWRIFHNDLELSDFIR-RDSGEPLALPLACLTPEESEHVAEEAKNSVAKITEEFRRFRVRAEISRKQKDAEARQATASSIAEQQRRINGQDVESELQKARLQAEQVVQLREQLADQEERWRKQCDKLSRENEKLRSEGSEAALAAQWRQRYEQCSREKAELVAKLSIVSTPAEARSTTGD--------FSSLVKQYEDLREEYKLYRKRAMEAIQEKELLLAQSGAAALRFAGGRPSRRGASPVPHPPPLEDPRFQYLKNLMIKYLCTDEFEAREHMERAVMTVLQFSD 425          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: A0A835YNU9_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU9_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.320e-50
Identity = 162/419 (38.66%), Postives = 214/419 (51.07%), Query Frame = 1
Query:   82 AAEQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGAAETARRREDEHAGASPVQLLRRVREGGMWWLLVVYDDEY---ETQ-GWKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVA----NKEQVQALEDELQRLRNELVDKEETWRHAYQKQ-------------------------VQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKG------DGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQGAXXXXXXXXXXLES----------------------QDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 1155
            AA  +  + TLAK+KRLL+LARRSIEENQRQ           R+ L   + A+R + +   A P+ +LRRV   G  WLL+ ++      ET   W+ F     V  FA      EPL +P  SLSPEE   +   A  +V+ IRE++RK+R          +AE+ Q++      K RR  G         +  ++Q L +E+Q L++EL ++++ WR AY+KQ                         V+E E L+R G +  +AAQWRQRYE  S EKEDA+AKLEM          G               A A+L  KY  LKEEYRLYR+KAM A+QG XXXXXXXXXX                          + KL YL+NL+LKYLGTD+  AR +MERA+  VLQFS
Sbjct:   19 AASGDAQESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQR-QSQPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGA-EPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEV-QMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFS 424          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: A0A6A3FS57_9STRA (GRIP domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FS57_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.120e-45
Identity = 128/405 (31.60%), Postives = 211/405 (52.10%), Query Frame = 1
Query:   85 AEQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGAAETARRREDEHAGA------SPVQLLRRVREGGMWWLLVVYDDEYETQ-----GWKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQ--------------------------GAXXXXXXXXXXLES-------QDPKL----QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 1155
            A+ + ++DT  K KRLL++A+RSI+ ++++I EKD  I  LRE L     A+ R+ +H+ A       P QLL +V  G + W LV Y DE E        W  F  EA +  +A  A+ GEPL +P  SL+P E   V +  ++++  ++EE+R++RV+SE+ RKQ++AEIR++SA ++A++  +IS        +  +A    L + + E  ++E  WR  ++K +++ E L    G+T LA +WR+RYE+   EK++   K+E  K                  +  S     Q L++E+  YRK+A++A++                           +          +ES       + P      +YLKN++ KY+ +D+ EA+EHME+AIATVL F+
Sbjct:   67 AKLQEMEDTENKLKRLLAMAKRSIDNSKQEIAEKDAAIQQLREEL-----AKSRQTQHSWAVDAATRDPRQLLHKVSHGNLLWCLVEYADESELDEAKEFAWHCFRSEAEIQAYANRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANAMAKQTEQISETDLSGELQSSKAQIRRLTKAQAEAEERESDWRRKFEKLMKDYEKLSGTMGETVLAMEWRERYEQSVREKQELEKKMEELK---------LMTSGAFGNSTDSGNGDLQSLRQEFAQYRKRALNAVEQKEKELNDMQAHYHENGGGSSNASRTNSFKEVRVRRMSMESNSSLSGFETPNATKTNEYLKNIVYKYMASDQDEAKEHMEKAIATVLNFT 456          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: B5YLS1_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLS1_THAPS)

HSP 1 Score: 167 bits (424), Expect = 9.800e-44
Identity = 131/391 (33.50%), Postives = 195/391 (49.87%), Query Frame = 1
Query:   82 AAEQENVQDTLAKFKRLLSLARRSIEENQRQITEK-------DGQISALREALGAAETARRR---------EDEHAGASPVQLLRRVREGGMWWLLVVYD-------DEYETQG------WKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMH---AIQGAXXXXXXXXXXLESQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSE 1158
            AA+   +++  AK+K LL LA+  I+E +  + E+        G ++    A+   ET   R         +D++     +  +    +    W L+ Y+       D Y+         W  F +E+A+S +    + GEPL +PP SLS E+S  + EDA+K V+SI EE+R+FRV++E+ +KQ +A +R + + S+   + RI GQ   +   Q +    +L  LR E+ ++E  W+ +Y   + E E LK  G +  LAAQWR RYE    EKEDA+  LEM +                         KY+DLKE +RLYRKKA     A Q              ++  K+ YLKNLM+ YLG+D    REHME AIATVL F+E
Sbjct:   86 AAQLAKLREANAKYKNLLKLAKERIQEQEGVLDERRSLSSRNQGGVNGT-SAIDPNETNIIRVCQRIKEQIDDDNDAMDEIGDVGNSEDSYEIWALIEYETATSDNNDAYDPSSFKRYKQWNKFTNESALSDYIR-RDTGEPLTLPPYSLSAEQSQKLAEDAKKAVSSISEEFRRFRVRAEVAKKQADATVRALHSNSVQTTRMRIEGQDIESELAQAKTDHAQLAALRAEMAEQEARWKESYDLLMAENEKLKSSGAEALLAAQWRHRYEACMKEKEDAVTNLEMER-----EKIMDLQDQRRKLDAGKYENKYRDLKESFRLYRKKAKEIFLAQQQGETGFLPSLHDTGAEGAKISYLKNLMVNYLGSDVS-VREHMEPAIATVLNFTE 468          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: A0A7S4IPA4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IPA4_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.130e-41
Identity = 116/330 (35.15%), Postives = 168/330 (50.91%), Query Frame = 1
Query:  247 EDEHAGASPVQL-----LRRVREGGMWWLLVVYD-----------DEYETQG---WKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQ------GAXXXXXXXXXXLESQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQ 1161
            +D+  GA P  +           G + W LV Y+            +Y T+    W+ F  EA +S      + GEP+ +PP SLSP++SA +  +A++ V  I EE+R+FRV++E+ RKQ +A +R + + ++A  +RRI GQ      EQ +    +L +LR E+ ++E  W+ AY   + E   LK  G +  LAAQWR RYE    EKEDA A+L++ K                         KY+DLKE +RLYRKKA    +      G             + D KL YL+NLM+ YL +D    REHME AI TVL+FS++
Sbjct:  135 DDDDDGAEPDPIGEPDXXXXSASGTVIWALVGYEITPSEDVPVTSPQYRTRRFAEWRKFHTEAELSDHVR-RDAGEPVSVPPYSLSPDQSARIESEAKRSVDRITEEFRRFRVRAEVARKQADATVRALHSSNVATTRRRIEGQDLEVALEQARTDATQLSQLRAEMAEQEVKWKEAYDLLLAENNSLKSSGAEALLAAQWRHRYEMCMSEKEDADARLQVEK-----EKCNVLSDARKAADAGKYEAKYRDLKESFRLYRKKAKEIFEAQQRGGGGVDAGLLHMSDRGTDDAKLSYLRNLMVNYLSSDSA-VREHMETAIGTVLKFSDE 457          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: A0A8K1CW38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW38_PYTOL)

HSP 1 Score: 162 bits (411), Expect = 2.880e-40
Identity = 118/409 (28.85%), Postives = 206/409 (50.37%), Query Frame = 1
Query:   82 AAEQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGA-AETARRREDEHAGASPVQLLRRVREGGMWWLLVVY--DDEYETQ--GWKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQ------------------------GAXXXXXXXXXXLESQDPKL----------------------QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 1155
            +A+ + +++T  K KRLL++A+RSI+ +++++ +KD +I  LR  L   A  +   E       P ++L +V +G   W LV Y  DD  +T    W  F  E  +  +A  AN GEPL +P +SL+P E   + +D ++++  ++EE+R++RV++E+ RKQ++AEIR++SA ++A +  +IS        +  +A    L + + E  ++E  WR  ++K +++ E L    G+T LA +WR+RYE+   E+ED   K+E  +                  A  ++    Q L++E+  YR++AM+A+                         G+               P+                       +YLKN++ KY+ T++ EA+EHME+AIATVL F+
Sbjct:   51 SAKIQEMEETETKLKRLLAMAKRSIDNSKQELADKDAEIEQLRAELATKAHASHTWETNETTRDPRRILSKVAQGNTLWCLVEYASDDSDDTSDFAWHRFQSEEQIKAYANRAN-GEPLALPSLSLTPFEVERMKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAEIRKMSANAVARQAEQISETDLSGELQSARAQIRRLSKQQAETEEREAEWRRKFEKLMKDYEKLSGTMGETVLATEWRERYEQAVREREDTERKMEELRS---------------ALASTNMNVDLQSLRQEFAQYRRRAMNAVDQKDRELHEIQSQYYENGSANSSRTGSLKDFGGPPRSSNGNGPRPLRRMSSNNSLGGLEVPNVTTTNEYLKNIVYKYMTTEQDEAKEHMEKAIATVLNFT 443          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: A0A2D4C3D3_PYTIN (GRIP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3D3_PYTIN)

HSP 1 Score: 152 bits (383), Expect = 3.350e-38
Identity = 115/384 (29.95%), Postives = 195/384 (50.78%), Query Frame = 1
Query:   82 AAEQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGA-AETARRREDEHAGASPVQLLRRVREGGMWWLLVVYDDEYETQG-----WKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKG---------DGXXXXXXXXXXXXXX-----------EAVASLMKKYQDLKEEYRLYRKKAMHAIQGAXXXXXXXXXXLESQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 1155
            +A+ + +++T AK KRLL++A+RSI+ +++++ EKD +I  LRE L      A   E + +   P + + +V  G   W  V Y  E++        W  F  E  V  +A  A+ GEPL IP +SL+P E  +V +D ++++  ++EE+R++RV++E+ RKQ++AE++++SA ++A +  +IS        +  +A    L +   E  ++E  WR  ++K  ++ E L    G+T LA +WR+RYE+   +KE    KLE  +          DG                          A +S    Y+DL           +  ++            + +     +YLKN++ KY+ T++ EAREHME+AIATVL FS
Sbjct:   40 SAKLQEMEETEAKLKRLLAMAKRSIDNSKQELAEKDTEIDHLREELKKKVAVAHSWEPDESTRPPRRFIYKVAHGSSIWCYVEYASEHDHDAQRDYAWHRFHSEEQVKAYAALAS-GEPLVIPALSLTPFEVESVKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAELKKMSANAVARQAEQISETDLSGELQSARAQIRLLTKQNTETEEREADWRRKFEKLYKDYEKLSGTMGETVLATEWRERYEQAVRDKEATDKKLEELRSTLATITNGSDGSARSDYAPFRRRDPFHGFENGGGSGSADSSRSSSYKDLGPPRSTGGGPPVRPLRRMSSNNSLGGLEVPNVTTTNEYLKNIVYKYMTTEQDEAREHMEKAIATVLNFS 422          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: K0S4B1_THAOC (GRIP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4B1_THAOC)

HSP 1 Score: 152 bits (384), Expect = 9.130e-38
Identity = 102/271 (37.64%), Postives = 144/271 (53.14%), Query Frame = 1
Query:  355 WKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQGAXXXXXXXXXXLE---SQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSE 1158
            W+ F +E+ +S +    + GEPL +PP SLSPE+S  +  DARK V++I EE+R+FRV++E+ +KQ +A +R +   S+   + RI GQ   +   Q +    +L  LR E+ ++E  W+ +Y   + E E LK  G +  LAAQWR RYE    EKE A+  LEM K                         KY+DLKE +RLYRKKA                 L    ++  K+ YLKNLM+ YL +D    R HME AI TVL F++
Sbjct:  246 WRKFVNESELSDYIR-RDTGEPLTLPPYSLSPEQSRRMEADARKAVSAISEEFRRFRVRAEVAKKQADATVRALHTNSVQTTRMRIEGQDIESELAQAKTDHAQLTALRAEMSEQESRWKESYDLLLAENEKLKSSGAEALLAAQWRHRYESCLKEKEAALTNLEMEK-----EKVVEMQDTRSKADAGKYEAKYRDLKESFRLYRKKAKEIFLAQQQGETGFMPTLHDSGAESAKISYLKNLMVNYLASDAA-VRGHMEPAIGTVLNFTD 509          
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Match: H3GH33_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH33_PHYRM)

HSP 1 Score: 145 bits (367), Expect = 2.440e-36
Identity = 101/309 (32.69%), Postives = 171/309 (55.34%), Query Frame = 1
Query:   88 EQENVQDTLAKFKRLLSLARRSIEENQRQITEKDGQISALREALGAAETARRREDEHAGA-SPVQLLRRVREGGMWWLLVVYDDEYETQ-----GWKGFADEAAVSGFAEGANVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETELLKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQ 996
            + + +++T  K KRLL++A+RSI+ +++++ EKD  I  LR+ L  ++ AR      A   SP QLL +V  GG+ W LV Y DE E +      W  F DE  +  +A+ A+ GEPL +P  SL+P E   V +  ++++  ++EE+R++RV+SE+ RKQ++AEIR++SA  +A++  +I         +  +A    L + + E  ++E  WR  + K +++ E L    G T LA +WR+RYE+   EK++   K+E  K                      L    Q L++E+  YRK+A++A++
Sbjct:   13 KMQEMEETETKLKRLLAMAKRSIDNSKQELVEKDEVIEKLRDELSKSQQARHSWVVDASTRSPRQLLHKVSHGGLLWCLVEYADEIEFEDSKEFAWHCFRDEGEIQAYADRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVMAKQTEQILETDLSGELQSSKAQVRRLTKAQAEAEERESDWRRKFDKLMKDYEKLSGTMGGTVLAMEWRERYEQSVREKQELEKKVEELK--------LVANGGFSDSGNGDL----QSLRQEFAQYRKRALNAVE 308          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig84.17412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI32_ECTSI2.920e-21389.46GRIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2S2V8_9STRA4.400e-6137.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YNU9_9STRA1.320e-5038.66GRIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6A3FS57_9STRA2.120e-4531.60GRIP domain-containing protein n=16 Tax=Phytophtho... [more]
B5YLS1_THAPS9.800e-4433.50Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S4IPA4_9STRA3.130e-4135.15Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8K1CW38_PYTOL2.880e-4028.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C3D3_PYTIN3.350e-3829.95GRIP domain-containing protein n=1 Tax=Pythium ins... [more]
K0S4B1_THAOC9.130e-3837.64GRIP domain-containing protein n=1 Tax=Thalassiosi... [more]
H3GH33_PHYRM2.440e-3632.69Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig84contigL-elsbetiae_contig84:52753..60061 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score605.1
Seed ortholog evalue2.2e-170
Seed eggNOG ortholog2880.D8LI32
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GRIP domain
EggNOG OGs2CN6M@1,2QU6G@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionGRIP
Ec32 orthologEc-04_003040.1
Exons7
Model size1161
Cds size1161
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816922.5701199-CDS-L-elsbetiae_contig84:52752..528571622816922.5701199-CDS-L-elsbetiae_contig84:52752..52857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 52753..52857 +
1691683914.8170135-CDS-L-elsbetiae_contig84:52752..528571691683914.8170135-CDS-L-elsbetiae_contig84:52752..52857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 52753..52857 +
1622816922.5813458-CDS-L-elsbetiae_contig84:53041..531811622816922.5813458-CDS-L-elsbetiae_contig84:53041..53181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 53042..53181 +
1691683914.8309991-CDS-L-elsbetiae_contig84:53041..531811691683914.8309991-CDS-L-elsbetiae_contig84:53041..53181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 53042..53181 +
1622816922.5915112-CDS-L-elsbetiae_contig84:54776..549991622816922.5915112-CDS-L-elsbetiae_contig84:54776..54999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 54777..54999 +
1691683914.8425965-CDS-L-elsbetiae_contig84:54776..549991691683914.8425965-CDS-L-elsbetiae_contig84:54776..54999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 54777..54999 +
1622816922.6017046-CDS-L-elsbetiae_contig84:55467..557041622816922.6017046-CDS-L-elsbetiae_contig84:55467..55704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 55468..55704 +
1691683914.8522182-CDS-L-elsbetiae_contig84:55467..557041691683914.8522182-CDS-L-elsbetiae_contig84:55467..55704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 55468..55704 +
1622816922.613247-CDS-L-elsbetiae_contig84:57238..573581622816922.613247-CDS-L-elsbetiae_contig84:57238..57358Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 57239..57358 +
1691683914.8613296-CDS-L-elsbetiae_contig84:57238..573581691683914.8613296-CDS-L-elsbetiae_contig84:57238..57358Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 57239..57358 +
1622816922.6230965-CDS-L-elsbetiae_contig84:58437..586081622816922.6230965-CDS-L-elsbetiae_contig84:58437..58608Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 58438..58608 +
1691683914.872885-CDS-L-elsbetiae_contig84:58437..586081691683914.872885-CDS-L-elsbetiae_contig84:58437..58608Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 58438..58608 +
1622816922.633115-CDS-L-elsbetiae_contig84:59896..600611622816922.633115-CDS-L-elsbetiae_contig84:59896..60061Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 59897..60061 +
1691683914.8862164-CDS-L-elsbetiae_contig84:59896..600611691683914.8862164-CDS-L-elsbetiae_contig84:59896..60061Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 59897..60061 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig84.17412.1prot_L-elsbetiae_contig84.17412.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig84 52753..60061 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig84.17412.1

>prot_L-elsbetiae_contig84.17412.1 ID=prot_L-elsbetiae_contig84.17412.1|Name=mRNA_L-elsbetiae_contig84.17412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
MSAVEPSMNGKATLGGMSRGPGVGGDGAAEQENVQDTLAKFKRLLSLARR
SIEENQRQITEKDGQISALREALGAAETARRREDEHAGASPVQLLRRVRE
GGMWWLLVVYDDEYETQGWKGFADEAAVSGFAEGANVGEPLKIPPVSLSP
EESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEK
QRRISGQGAVANKEQVQALEDELQRLRNELVDKEETWRHAYQKQVQETEL
LKREGGDTALAAQWRQRYEKLSLEKEDAMAKLEMFKGDGGGGSGGGGGGG
GQGEAVASLMKKYQDLKEEYRLYRKKAMHAIQGAGAAGGGGGGGLESQDP
KLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQ
back to top

mRNA from alignment at L-elsbetiae_contig84:52753..60061+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig84.17412.1 ID=mRNA_L-elsbetiae_contig84.17412.1|Name=mRNA_L-elsbetiae_contig84.17412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7309bp|location=Sequence derived from alignment at L-elsbetiae_contig84:52753..60061+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGCAGTGGAGCCTAGTATGAATGGCAAGGCCACTTTGGGTGGGAT GTCTAGGGGGCCGGGAGTTGGAGGAGATGGCGCAGCTGAGCAGGAAAACG TCCAGGTTTGGCTCCAGAAGATTGCACAGAAGAACACGTTTTGCCGCATA TGGTTCCTCCGTCCGAGAAAGAAGACAGCTAGATGACCCGACGCGAATTA GCGCACTTGCCACTGAGTTGCTACCATTCTTGTCGATTGTCCCTCTCTCT CCGAGTTAACTTTCTTCGCGTGTGTTGGTGCGCGTCCAGGATACGCTCGC GAAGTTCAAAAGGTTGCTGTCGCTCGCCCGACGAAGCATCGAGGAGAACC AGAGGCAAATCACAGAGAAGGATGGACAAATCTCGGCCCTTAGAGAAGCG CTGGGAGCTGCGGAGACCGCCCGCCGAAGGTGTGGTCAGTTTTTGTGGCT TGTTCAGGGTCCGGGTGCCGCAATCGTGCGCCCAGGGGCGCCTTTGCAAG TTTAGTCGGCATGCGGAATAATGTGTCAATGTGTCAACCCGCGTGTGACG GCGTGACAGACGTGTGATCACCTCTTCTTTTGAGCCGGGAGGCGCCGCCG CCGCCGCCGCCGCCGGCACAACTGGCTACAAGAGCTAACACAGTAGTAAC GTACATGTAAGCCAACGTGAGTGAATAGGATTAGTTCACGAGCAAACGAT CAACCAGAAAAGGCATCGAACTCCAAAACCCTGTTTTGCTAACATGACTC TGGGTCAGTGTTATTATTGACTCTTTTTTTCGCTCTTTTTCGGCGAGATC GCGATGCCCAAGGCCAGGTTGGTGAGGTGGAAAACCTGCCTGTAGCTTCT TTGCTACCCGAGGGCGTGGAAGAAATAATGACGCGAATCGATGCCCCAGT CGTGGAATATGAATGATTTAATGCGATCCGCAACTCTGTCCTGGTGCCCC CGTAGACGAAGCACGCTCATACCCCCCCCCCCACCAAAAGCCCCCGGCCT CTTCGGCACGCACTGGCATCGTGCCCCGACGATCCAAAGCACAGAATAAC AACCTATTGCTCATAGCTAGTGTCGGTGCAGATTCTGCAGATTTTAGACA CCGAAATCGCTCTGTGAATGTCGAATTAGATCTGCCTTCCAACACGGGTT GGTGAGCTCGGCCAGGTCAGCAGCAGCAGACGCAGCAGCAAGGGTTAGTG CCCGGCAACGAGATAACTACTGTTGTCAGGGGGTGATCTGCACACCTGAA GCCCTGCTCTTACCGATGTGTGAAGTTTCCTGGTGGATCTCGACGCTTTG TTCACTCAAAAAAACGTGCTGCAGTCTGTCTCCCAACTGGCTCTCTCTCT CGCCTTCGTCTCTCTCTCTTCCCTATCTAATTTGTGCGATGCCAAGAGTT GGTGCCCTGCAAAAACTACCACCCAAAACGCTTGGCCACCTCTATAGTCA CATATCTCAACAACACAGTCTCAAAGTCGTGTTTTGGATCACTCTCTTTA AGCTGAGATGTCTGCTTCTCCGTGCCCTGGGTGTACTGAGGGCCCATGTT TCCGCTGTCCCAGGACGTCCCGCTGCAAAAATCCCACGGGGTACGTGCCT CCTTAAAACTAGGAGTCAAATAACACTGGGGTGCAGCAGCTGTGTTTTGT TGTTTGAAGACAGCAAGCAATAACTGGGTACTCTGCAGTATTGTATTCAA CGTTGTGAAAGATAAAGCAGATAAAAAAAACGGTGTTTTTTCCCTCTCGG TAGTGTCGAAGACGAACCCGCTCTTGGTCACCTATTAACGGCGGTGCTGG ACCATTCGCGGCATCTCTGCCCTCCGGGCCAGCCGTTTGCGATGGGTTTG GGGGAGGAATCCCGGGTCCACGCTCCTTCTTCTGTTCTACATGAGTGACA TGCTACTACAGCCACTTTTCCGATACAACACCCATCACCACAGCCCCCCC TCCTCAACAAGCAACCCCCAGCTGTTTTCTTCCTTCACACACACACACAC ACACACACACACACACGCGCGCAGAGAGGACGAGCACGCGGGAGCCTCCC CGGTGCAGCTGCTCCGTAGGGTCCGCGAGGGGGGCATGTGGTGGCTGCTG GTCGTGTACGACGACGAGTACGAGACGCAGGGGTGGAAGGGCTTCGCGGA CGAGGCCGCGGTGTCGGGGTTTGCCGAAGGCGCCAACGTGGGGGAGCCGC TGAAGATCCCTCCCGTGTCGCTGTCTCCGGAGGAGTCGGCGACGGTGGTG AGTGAGCGAGAAATGAGAACCGGACCACTCGAATAAAACTGGTGCGGCGG TTTAGCTACTGCTGTATCTGTGTACGTTGTTACCTTTCGTCTGTACGACG GAGGAGGATTGGTGGCGAGGATATATGTGCAAAATGGTGGCAAGGCCAGC AGGCGGGGCGAGAGATGGACAGGGAAGAGATAAATGTTTGCGGGGAGAGC GCGGGGAGGGGGGGGGTTGGCTCCTATTTAGTCGCCAAGGCATGCAGCTA ATTACATCCAGCCGCGCCCGTAGTCCAGCTTGTCTCGCGGACGATAACTC GCCCCGCAGTAATAAGCAGCCTCTGTTTCCCTCGCCAATTTGCTTGGCAC CCTGCACACCTATCTACTGTCCGATCTCCGCCCTCTCCTTCCCTTGCTCT CGCTTGCCCGCGCCTCGCCTCGCCTCGCCTTGGGGGTTTCTACATGCGAT GGTCTTATTATGTAGCTGGAAGACGCCCGCAAGCAGGTGGCGAGCATACG CGAGGAGTACCGAAAGTTCCGGGTGAAGTCGGAGCTGGGGAGGAAGCAAC GGGAGGCGGAGATCCGGCAGGTGTCGGCGGAGAGCATCGCGGAGAAGCAG CGACGCATCTCCGGCCAGGGCGCGGTGGCGAACAAGGAGCAGGTGCAGGC TCTGGAGGACGAGCTGCAGCGGCTCCGGAACGAGCTCGTCGACAAGGAGG AGGTGGGTGCGGCGGGGGAAGAGAGAGCAGCAGAGCTTAGAAAGGGCCAT TTCCCCCCTCTGTACTTGGTATATACCACCTCATTGTATGCATGCTTTTA AAAATATATTGAGTACAATTAATCAAAGATGGAACCTACCTCACACTAGA GCAAGGACTCAATATGGGGTTCAAACGGTATTCCATACAGTGACGTAATA TTTGGCAAAGCGAGCAGAAAATCAACCTAAAATATCAGAAGAGTTCAACA TCTCCAACAAGTATTCAGGCGGGTAGATGCCCGCCGTGATGCCGTAATGT TGTCATCTACTTCAAAATAGGAACACATCTTTTGTTTTCGGACTAAGTGA AGTATACATCTGTATGTATGTGTATGTTGTGCATTCAGTAGACAAGAGGT AAAAAAAGAGAAGTTTTGGAGATTTTGTAATGTGGCATTTAGGCGGGGTG AGAAAAAGGGGGTGTGGGTGCGTCGCCCTGGAGTCTTTTCTTATGCAACA GCAGTTTTTGTTTTTTTCGTTTCCCGCTGTCGAAGGTGCTCGACGTGACC AAGCGCAACAAAAAAATAGACGGCAACGTTTGCCCGTACTTGATTCAGCA CACAAATGAGCCGGCAGCAGAGAGCAAAGGAAGACCGAGCTAGCTTCCCC TTACGTCTGGTGCGCAAAAATCGTTAATACTCAATTGACTGGCGGGAGCT CTGTTATGTGAGAAGCGAGCAGCAGACGGGGCGGGCGTAGTTGGAGGAGG TCCAACCCCCCCGCCCCCCCTTCCTGTGTGACCCCGGTTGGGTCGTCTAG CCAGTCGTAGTGGAGGAAGGGGGCCAGTGGGGCAGACGACGAATAAGCCA ATAATGGGAGGAAGAAGAAAAAAAAAGAAGAGCTGGGTCGGCAAGTTACC TACAGCCGCAGTGGACGTCCCCAGGGGCGCACGACAATGTGCTACTTTGA GGGATGTACGTACATCCATCCAGCACCCCGGAAACTTTTTCGGCGGGTGG CGACTCGGTCAAGCATCACGGCAGCCATGCTCTCATCGCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCTTCCCCCCCCCCCCGGGGGGGGCCGGCCC CCACGCAAGCGGGGGAGCGGCCGGGGGGGCCCCCCGGGGGCTGTGGCGGG GGGGGGGGGNNNNNNNNNNGGCTTAGCCCCCCCCCCCCCCCCGCAGTCTT TCTCGGGGGGGGGGGCCGCGCCCAGCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCTGCTGCTCTTTCGCGCCACGACGATG CGGGTCAAGCGCCACAGAGCAGAGCAGAGCCGCGAGAGGGCCCGCCTTTG GTTTTCGTGATGGGGGCGGGGCGGGGCTTACCTTCCCTCTTCCCCTCGTT GTTGGTTGGTTTGCGCACGTGCGCTTTTCATCGTTGGCCCGGCCTCTGGT CTCCGTTGTCGTTGTGACCTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGTTGCTGCCAAAAACAGACCTGGAGACACGC GTACCAGAAGCAAGTGCAGGAGACCGAGCTGCTGAAGAGAGAGGGTGGCG ACACCGCTCTTGCCGCCCAGTGGCGGCAGCGGTACGAGAAGCTTAGCCTG GAAAAGGTACGCTGCGGACCTGGAGTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGTTGTTTGTTGTTTGTTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCCTTGTCCTTGTTGCCT TCTTTGCCGGTCGGTGCCTGTCGCCTTTCTTCCGTGGTGGTGTCTCTGTT TCGTTGCGTTGCGTGTTTTTAGTTTTAGAACCTGCGTTGTTATTGCCTTT TGTAGCGACCGCGCCGGTGGTGTTGGGTTAGTACAGACTCACGGAGGAAC TGGGCAGAGAGATCGGAACATTTTTAAATGTGAAGACAACAACAACAACA ACAAACGTTCGAACACAAGGGGGTATGTATGCATAGAGGAAGGAAAGGGC GAGGAAGGCAGGGTCCTCTCTCTCTCCCATGCATGGATACTTAGCCGCGG GAAAACGGACCGTCCTCAAATATTTGGCCTTGTCTCTTGTGGTAGCTTTT GGACCCGGGTTTTGCAACTCCTTTCGCCCCGGGGTTGGAAAAGGTTGTTC GTTGGTTCGATTGCGTGGGGTACGTGTGTGCAGGAAGCGGCAAGCGGTGG TATGTAGGGCCCCCCGTGCTGAACAGCCTCAAGGCTGGGCTAATGCAATG TGCATTCCATTCAGGTAGGCGTATTTATCTGCAAATCTCAGGTGTAAGCG CCTCTCCTATTCCTCTTCCTCCTCCCCCTCCTGCTCCTCCTATTCCTCCT GGAGTTGGTACGGCGGGCCTTATGGCCTTGTGTGGCTTCGGGCCTCAGCG CCTCGTGCCTGCGATGTGTCCAACAGGCGTCTCGCCCAGGATCAATGTCT CGCCTACTTCTACACTTGTTGGGTTCGGGGATCAATGTCTCGCCTTTATT TTGATCAAGCGCGCCGACGTGCACCCACGACAGTCTTCTGTGAGGGTAAT CGGTCCCACATCATGCTATTTACGTATCAAATGAGAGTTAGGGTAACATA AGAGTGACAGACGAGCCTGCTGTTTTATCCCCCCCCCCCCTATCGTATTT GCGTTGCTGCCTGTGTGCGTGTTTGCGTGCCTCAGGAGGACGCGATGGCG AAGCTGGAGATGTTCAAGGGGGATGGAGGAGGGGGCTCCGGCGGGGGGGG GGGGGGGGGGGGGCAGGGCGAGGCGGTGGCATCCCTGATGAAAAAATACC AGGACCTCAAGGAGGAGTACCGTCTCTACCGAAAAAAAGCCATGCACGCG ATACAGGTGATAGCAAATTGCCGTTCTTTATACTACCTACTCTGCTGTGC CGTGAAACAAGCGACCTGCCTCCAAGAGCGTTGGGAGCCCCGAGGATGCT CCGAAATATGGAGGACCTACCTTGTAGATGACATCGCGTTTGTCGCCCCC CGGAGAGCGTGGTGGTGCAGCTGCTGGTTTCGTCATGCGCGTTTTTGTTT GAGTCCTTTGGAAGCCGATATCAAAGCATTAGACCAGTCAGCGTGTAGCT GATTGTTTCGTCATGCGCGTTTTTGTTTTCGGACTTACAGACGCCGACTG ACTGGTCTAATGGTTTGATTTCGGCTTCTGTAAGTCTGACTGCCGACTGA CTGGTCTAATGATTTGATTTCGGCTTCTGTAAGTCCGAAAACGAAAACGC GCATGACGAAACTATCAGCTACACGCTGACTATGGTCCGAAAACAGACAA AAGCCACATAATTGCAGGGCGTGCGCTTGCACGTTGGGTAGCAGAGAATG GTTGGCACAATATCAGATTAGTTTTTGCGCTTGTTCTTGCCCGATGCAAT GCGAGCCTCGCGGGGGGGCTCCGTGTTGGCCGTTGGTGCTGTGTCGCACA TACCCTCCGGAGCGTTGCTCTTTGCGGTTATTAAAACATGTTTGTTTCTT CTGCGGGCACGAAGGGTACGCCTCCTTTCATCTTCTTCGGAAGCGGGGCA CCCCTTTGGTGTAGAGTGCGTCGACACGAACCGCACAAACACAGCCGATT CTGATGTGTGTTACATACGTTTATTTACCTCTGTATGAAACATGTTTCGG AGCATCACGACTGCTGTGTGTGTTGTGTGTATGTCGTATTCACATCAAAC CGTTCCGGTCTCTCTATCCAGTACCTCCATGATGTGGGTGTGTGTGTCCT TCCCATTTATTTTGACGACAGTCCCCCCAAGTGGAGACGTGTGCTACACC TTGCGGTGTACTCAGAGGTACTACACTTTGCAGTGCATTTGTCTGTACAA CTAGAACCAAACGGGGTCACACAGTAGGGGGTGAACACTGGGGTCTTTTT GATGAGTCCGCACTAATCCAACAGACGCAGTCAATTCCCGTGGTCACATA ATAACTTACCCTGAAAAGGGTACCATATATCGTACTGAAAAATAGAATGC AAAGAAGCACCTTCATTTCCCCCCAGCACCAGATTTTGGTAGTCCAACGC CACAGACAGCCAGCCTCCAATGTACAAATATCCTCTTCGTGCGTTCGTGC TGTTTTTTTTGTTTGTGTGTGGGGTATGTATGTATGATGAATAGGGTGCT GGGGCGGCCGGCGGTGGCGGCGGCGGGGGGTTAGAATCCCAAGACCCAAA GCTGCAGTACCTGAAGAACCTGATGCTCAAGTACCTGGGTACCGATGAGG GGGAGGCCCGCGAGCACATGGAGCGAGCGATCGCGACCGTACTCCAATTT TCAGAGCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig84:52753..60061+

>mRNA_L-elsbetiae_contig84.17412.1 ID=mRNA_L-elsbetiae_contig84.17412.1|Name=mRNA_L-elsbetiae_contig84.17412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2322bp|location=Sequence derived from alignment at L-elsbetiae_contig84:52753..60061+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGCAGTGGAGCCTAGTATGAATGGCAAGGCCACTTTGGGTGGGAT
GTCTAGGGGGCCGGGAGTTGGAGGAGATGGCGCAGCTGAGCAGGAAAACG
TCCAGATGTCGGCAGTGGAGCCTAGTATGAATGGCAAGGCCACTTTGGGT
GGGATGTCTAGGGGGCCGGGAGTTGGAGGAGATGGCGCAGCTGAGCAGGA
AAACGTCCAGGATACGCTCGCGAAGTTCAAAAGGTTGCTGTCGCTCGCCC
GACGAAGCATCGAGGAGAACCAGAGGCAAATCACAGAGAAGGATGGACAA
ATCTCGGCCCTTAGAGAAGCGCTGGGAGCTGCGGAGACCGCCCGCCGAAG
GATACGCTCGCGAAGTTCAAAAGGTTGCTGTCGCTCGCCCGACGAAGCAT
CGAGGAGAACCAGAGGCAAATCACAGAGAAGGATGGACAAATCTCGGCCC
TTAGAGAAGCGCTGGGAGCTGCGGAGACCGCCCGCCGAAGAGAGGACGAG
CACGCGGGAGCCTCCCCGGTGCAGCTGCTCCGTAGGGTCCGCGAGGGGGG
CATGTGGTGGCTGCTGGTCGTGTACGACGACGAGTACGAGACGCAGGGGT
GGAAGGGCTTCGCGGACGAGGCCGCGGTGTCGGGGTTTGCCGAAGGCGCC
AACGTGGGGGAGCCGCTGAAGATCCCTCCCGTGTCGCTGTCTCCGGAGGA
GTCGGCGACGGTGAGAGGACGAGCACGCGGGAGCCTCCCCGGTGCAGCTG
CTCCGTAGGGTCCGCGAGGGGGGCATGTGGTGGCTGCTGGTCGTGTACGA
CGACGAGTACGAGACGCAGGGGTGGAAGGGCTTCGCGGACGAGGCCGCGG
TGTCGGGGTTTGCCGAAGGCGCCAACGTGGGGGAGCCGCTGAAGATCCCT
CCCGTGTCGCTGTCTCCGGAGGAGTCGGCGACGGTGCTGGAAGACGCCCG
CAAGCAGGTGGCGAGCATACGCGAGGAGTACCGAAAGTTCCGGGTGAAGT
CGGAGCTGGGGAGGAAGCAACGGGAGGCGGAGATCCGGCAGGTGTCGGCG
GAGAGCATCGCGGAGAAGCAGCGACGCATCTCCGGCCAGGGCGCGGTGGC
GAACAAGGAGCAGGTGCAGGCTCTGGAGGACGAGCTGCAGCGGCTCCGGA
ACGAGCTCGTCGACAAGGAGGAGCTGGAAGACGCCCGCAAGCAGGTGGCG
AGCATACGCGAGGAGTACCGAAAGTTCCGGGTGAAGTCGGAGCTGGGGAG
GAAGCAACGGGAGGCGGAGATCCGGCAGGTGTCGGCGGAGAGCATCGCGG
AGAAGCAGCGACGCATCTCCGGCCAGGGCGCGGTGGCGAACAAGGAGCAG
GTGCAGGCTCTGGAGGACGAGCTGCAGCGGCTCCGGAACGAGCTCGTCGA
CAAGGAGGAGACCTGGAGACACGCGTACCAGAAGCAAGTGCAGGAGACCG
AGCTGCTGAAGAGAGAGGGTGGCGACACCGCTCTTGCCGCCCAGTGGCGG
CAGCGGTACGAGAAGCTTAGCCTGGAAAAGACCTGGAGACACGCGTACCA
GAAGCAAGTGCAGGAGACCGAGCTGCTGAAGAGAGAGGGTGGCGACACCG
CTCTTGCCGCCCAGTGGCGGCAGCGGTACGAGAAGCTTAGCCTGGAAAAG
GAGGACGCGATGGCGAAGCTGGAGATGTTCAAGGGGGATGGAGGAGGGGG
CTCCGGCGGGGGGGGGGGGGGGGGGGGGCAGGGCGAGGCGGTGGCATCCC
TGATGAAAAAATACCAGGACCTCAAGGAGGAGTACCGTCTCTACCGAAAA
AAAGCCATGCACGCGATACAGGAGGACGCGATGGCGAAGCTGGAGATGTT
CAAGGGGGATGGAGGAGGGGGCTCCGGCGGGGGGGGGGGGGGGGGGGGGC
AGGGCGAGGCGGTGGCATCCCTGATGAAAAAATACCAGGACCTCAAGGAG
GAGTACCGTCTCTACCGAAAAAAAGCCATGCACGCGATACAGGGTGCTGG
GGCGGCCGGCGGTGGCGGCGGCGGGGGGTTAGAATCCCAAGACCCAAAGC
TGCAGTACCTGAAGAACCTGATGCTCAAGTACCTGGGTACCGATGAGGGG
GAGGCCCGCGAGCACATGGAGCGAGCGATCGCGACCGTACTCCAATTTTC
AGAGCAGGGTGCTGGGGCGGCCGGCGGTGGCGGCGGCGGGGGGTTAGAAT
CCCAAGACCCAAAGCTGCAGTACCTGAAGAACCTGATGCTCAAGTACCTG
GGTACCGATGAGGGGGAGGCCCGCGAGCACATGGAGCGAGCGATCGCGAC
CGTACTCCAATTTTCAGAGCAG
back to top