mRNA_L-elsbetiae_contig84.17407.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig84.17407.1
Unique NamemRNA_L-elsbetiae_contig84.17407.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A6H5KPN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPN3_9PHAE)

HSP 1 Score: 548 bits (1411), Expect = 3.710e-188
Identity = 318/474 (67.09%), Postives = 354/474 (74.68%), Query Frame = 2
Query:   47 MKAPQRSCRRQLACLVLLWVSLVQGHAPSAMLLDSTK-EPGAPSEHTSPA------PGCS---RSDG-------VAAPTSALLQAGTSSHSPGVDCISTPASALPSNSAMLGDRQTAAGRLAARELTGGGWGSSHRGRRSQARRPPPQPPAGEIRTYAMNRSISGTAWPEVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALPRQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRRAAAELREAKTQGIGGSSTRSSR 1417
            M A Q   RR+   L L W+ LV+GH PS +L   T  EP      T+ A      P C+   RS G       + A T  L + G SS  P    ++ P+    S + +     T+ GRL A  L+GG     HR R  Q +R         ++  A     + +AWPE  RVLK+CLARA SGG+PGA+AGLLQVVTLMWLRTIVNYQCRYGTSI AAASELYRQGGVLRFYRG VFA+VSNP+SRFGMAAANE A+ L+DALP QVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGG LGCLYQGATAAAAATAVGYFPWFLTFN+LNGRLR+PSA+A MLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYD+KVTY GAAALV+E DGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDK+VVPRR AAELR+ +       S+ SSR
Sbjct:    1 MGALQGIRRRRAGFLALTWLCLVRGHVPSTLLDSGTGVEPSPRPVFTAAAGAKANLPSCNGGGRSSGRRVEFSSLPAATGLLSRGGGSSLDP--TSVTEPSGKNGSTACL---DHTSHGRLVAAGLSGGEL--FHRKREQQQQR---------LQATAKTNGDATSAWPEARRVLKRCLARAASGGIPGAVAGLLQVVTLMWLRTIVNYQCRYGTSIVAAASELYRQGGVLRFYRGVVFALVSNPMSRFGMAAANEGAMALSDALPMQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGQLGCLYQGATAAAAATAVGYFPWFLTFNFLNGRLRRPSALAGMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDSKVTYSGAAALVIENDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKFVVPRREAAELRDVRNSHSRQGSSSSSR 458          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA)

HSP 1 Score: 266 bits (680), Expect = 6.770e-81
Identity = 145/293 (49.49%), Postives = 192/293 (65.53%), Query Frame = 2
Query:  479 SISGTAWPEVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRR 1351
            S S  + P  S VL K L +A  GGL GA A ++ V TLMWLRT +NYQ R+GTS  AA + LY++GG+ RFYRG V A+V  PLSRFG  AAN   + L +++   + + V   T  AS  A +WR+VL P+DT KT++QVEG  GF +L KK        LY GA AA+AAT VG++PWF T+NYL  R+ K +A    L RNA IG ASS+ SD CSNSIRV+K  KQ++      VTY  AA  V+  DG+LGLFGRGL T+++ANG+Q ++F+V W++  +++  P R
Sbjct:    3 SASSQSAPSASEVLNKALRKALGGGLAGASAMVMNVGTLMWLRTAMNYQYRHGTSTRAAITHLYKEGGIPRFYRGVVPALVQGPLSRFGDTAANTGVLALLESMDSTKGLPVGVKTLCASGAAALWRIVLMPIDTTKTIMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIPKETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTE---PVTYLQAAKNVIASDGVLGLFGRGLKTKLIANGMQGLMFSVFWKFFEEQFNGPAR 292          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A4D9D315_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D315_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.240e-76
Identity = 137/267 (51.31%), Postives = 181/267 (67.79%), Query Frame = 2
Query:  536 RAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHD 1330
            RA  GG+PGA+AG++QVVTLMWLRT+ NYQ RYGTS   A + LY+QGG+ RFY G  FA++  PLSRFG  AAN+    L       R + +   T +A+L AG WR+ L P+DT KTVLQVEG +G+ SLM+++  G L   YQG+ A AAA A+G+FPWF  +  LN  +R P+     L RNA IG  +S+ +D  +N +RV+KTTKQA A+  + ++Y     +++  DG  GLFGRGLSTRIL NGLQS++FTVVWR L +
Sbjct:  132 RALGGGIPGALAGMMQVVTLMWLRTVGNYQYRYGTSFREAVATLYKQGGMGRFYEGLGFALIQGPLSRFGSTAANDGCRALLKNFETTRGLPLFVPTAMAALAAGSWRIFLMPIDTAKTVLQVEGNEGYRSLMRRIGRGELSAFYQGSLATAAAAALGHFPWFYVYTLLNEAIRAPAGWLGKLCRNAFIGFVASLVADTLTNVMRVVKTTKQATASLSS-ISYAQTVQIILAADGWNGLFGRGLSTRILTNGLQSIVFTVVWRALSE 397          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A448ZHR9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHR9_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.660e-76
Identity = 138/278 (49.64%), Postives = 186/278 (66.91%), Query Frame = 2
Query:  509 SRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKY 1336
            + + +    RA  GGLPGA AG++QV+ LMWLRT +NYQCRYG S G A S LYR GGV RFYRG  FA++  PL+RF   A+N+  + L   LP  R  +   TT  ASL  G +R++L P+DTCKTVLQV+  +GF +L+++V  G +G LYQGA A A ++A+G++PWF+ FN L+      + ++  LLRNAGIGL +SV SD   N  RV+KTTKQ+  +     +Y     +++  DG  GLFGRGL TR+LAN +QS+LFTVVWR L D++
Sbjct:  112 AEIFRSARRRALGGGLPGAAAGVVQVLALMWLRTTINYQCRYGGSFGHALSLLYRDGGVRRFYRGIGFALLQAPLTRFVATASNDGVLALLAGLPQTRDWTPAVTTVFASLTVGAFRILLMPIDTCKTVLQVDSREGFRALVRRVRAGRVGALYQGALATAVSSAIGHYPWFVIFNALSSAEWLEALVSSGLLRNAGIGLVASVVSDTVVNVFRVIKTTKQSIGSRH-DFSYGDTIKVILAADGWKGLFGRGLRTRVLANAVQSVLFTVVWRGLADRW 388          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A5A8BYU3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BYU3_CAFRO)

HSP 1 Score: 253 bits (646), Expect = 9.940e-76
Identity = 144/287 (50.17%), Postives = 181/287 (63.07%), Query Frame = 2
Query:  503 EVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRRAA 1357
            ++ +VL K   RA  GGLPGA A  +QV++LMWLRT +NYQ R+GT+   A  +LY +GGV RFYRG   A+   PLSRFG  AAN   + L D     R + V   T  AS  A +WR+ L P+DT KT LQVEG +G   L  K+       LY GA  A AAT VG+FPWF T+N+L+  L  P ++A  L RNAGIG A+S  SD  SNSIRVLKT +Q A   + KV+Y  AA  ++ KDGL GLFGRGL TR+LANG+Q  LF+V W+Y   +Y    +AA
Sbjct:   13 DIQQVLAKAGKRALGGGLPGAAAMGVQVLSLMWLRTTMNYQYRHGTTTRQALRKLYAEGGVRRFYRGLAPALFQGPLSRFGDTAANAGMLALLDHYDSTRSLPVAAKTAAASTAAALWRICLMPIDTLKTTLQVEGARGMTILASKMRTSGPVVLYYGAMGAFAATWVGHFPWFFTYNFLDASLSVPDSLAAKLARNAGIGFAASCVSDTSSNSIRVLKTYRQTA---EVKVSYVEAARSIIAKDGLFGLFGRGLQTRLLANGVQGALFSVGWKYFQLQYANAEKAA 296          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A7S2UB41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB41_9STRA)

HSP 1 Score: 256 bits (654), Expect = 1.170e-75
Identity = 142/301 (47.18%), Postives = 192/301 (63.79%), Query Frame = 2
Query:  500 PEVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYG-TSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRRAAAELREAKTQGIG 1393
            P +  +LKK L +A  GG+PGA AGL+QV+TLMWLRT++NYQ RYG +S   + + +Y  GG+ RFYRG  FA+V  PLSRF   AAN+    L  AL   +Q     TT +A+L  G WR++L P+DTCKTVLQV+  +GF  LM KV  G    LYQGA A A  + V ++PWF T+N+L         ++   +RNA IGL S ++SDV SN +RV+KTTKQA  +    ++Y    ++++  DG  GLFGRGL TRI+AN LQS+LFTVVWR L +++     A  + R  + +G G
Sbjct:   65 PTLESILKKSLKKAVGGGIPGAAAGLIQVMTLMWLRTLINYQSRYGGSSFRRSFATMYADGGIRRFYRGVGFALVQAPLSRFVSTAANDGINALLPALEMTKQWGPGRTTVVAALVVGAWRMLLMPIDTCKTVLQVDSVEGFRHLMLKVQAGQFSVLYQGAVAQAIGSFVSHYPWFYTYNFLVSINFMHHLISSQHIRNALIGLISGITSDVVSNCLRVVKTTKQAMGS-KRSISYAETISMILNADGYRGLFGRGLKTRIMANALQSILFTVVWRGLAERWDTSHTADKDNRRMELEGEG 364          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: F2USX5_SALR5 (MC family transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USX5_SALR5)

HSP 1 Score: 252 bits (643), Expect = 1.770e-75
Identity = 146/281 (51.96%), Postives = 175/281 (62.28%), Query Frame = 2
Query:  500 PEVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKY 1336
            P V  VL K   RA  GG  GA A + QV TLMWLRT +NYQ RYGTS  AA   LY+QGGVLRFYRG   A++  PLSRFG  AAN   + L D+    R + V   T  AS  A +WRVVL P+DT KTV+QVEG  G   L  K+  G    LY G+ AA +AT VG+FPWF TFNYLN  + +       L R A IG  SSV SD  SNSIRV K TKQA   +   +TY  A   V+ KDG+ GLF RGL TR++ANG+Q M+FTVVW+ L +++
Sbjct:   10 PSVQEVLAKAGKRALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQA---HTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMMFTVVWKGLEERF 287          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A836B9G0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B9G0_9CHLO)

HSP 1 Score: 253 bits (647), Expect = 2.300e-75
Identity = 148/303 (48.84%), Postives = 191/303 (63.04%), Query Frame = 2
Query:  506 VSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALPRQVS--VTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSA----MAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRRAAAELREAKTQGIGG 1396
            + +VL+    +A  GGLPG +A   QV++LMWLRT +NYQ RYGT    A   LY++GGV RFYRG + A+V  PLSRFG  AAN   + L DA P   S  V   T  AS  AG +RV L P+DT KT++QVEG    A+L +KV  G  G LY GA A+AAAT VG++PWF T+NYLN  L  P+A    +   L R+A +G  SS  SD CSNSIRV+KTTKQ        +TY   A +++EKDG+LGL GRGL T+I+ANG+Q + FT+VWR   D +    +A +  +E + Q  GG
Sbjct:   18 IGQVLRDAGNKALGGGLPGMVAMATQVLSLMWLRTTINYQYRYGTDTTTALRTLYKEGGVRRFYRGLLPAMVQGPLSRFGDTAANAGTLALLDAYPGTASLPVGVKTLAASGAAGAFRVFLMPVDTVKTIMQVEGKDAVAALWRKVATGGPGVLYHGALASAAATFVGHYPWFATYNYLNSVL--PAAPEGDLGRKLGRSAVMGFCSSFVSDCCSNSIRVIKTTKQTTRE---PMTYPQVAQMIIEKDGVLGLMGRGLKTKIIANGMQGICFTIVWRMGQDWWDAQHKAKSRAQEEQGQPRGG 315          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A7S2V2G3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.720e-75
Identity = 138/284 (48.59%), Postives = 182/284 (64.08%), Query Frame = 2
Query:  491 TAWPEVS--RVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALP--RQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHD 1330
            TA P++S   +L+K   RA  GG+ GAMA  + V TL+WLRT +NYQ RYGT+   A   LY++GGVLRFY+G++ A+V  P+SRFG  AAN   + L D+    R +     T  AS  A +WR+ L P+DT KT +QVEG KG   L  K   G    LY GA AA+ AT VG++PWF TFN LN R+ K   +   L+RNA IG  +S+ SD CSNSIRV+K  +Q    +  KV+Y  A   V+ +DGL GLFGRGL T+ILANG+Q ++F+V+WR + D
Sbjct:    5 TAKPQLSTSEILQKAANRALGGGIAGAMAMGVNVTTLIWLRTTMNYQYRYGTTTTEALKALYKEGGVLRFYKGYLPALVQGPMSRFGDTAANTGTLALMDSYDSTRNLPAAVKTVSASATAAIWRIFLMPVDTLKTTMQVEGSKGVGQLAAKFKAGGPTVLYHGALAASTATFVGHYPWFTTFNILNARIPKYDDLPKKLMRNAFIGFCASLISDTCSNSIRVVKVYRQT---HPEKVSYVNAVKGVIAEDGLAGLFGRGLKTKILANGMQGIMFSVMWRMIED 285          
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Match: A0A7S0UTU9_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UTU9_9CHLO)

HSP 1 Score: 251 bits (642), Expect = 4.790e-74
Identity = 144/294 (48.98%), Postives = 187/294 (63.61%), Query Frame = 2
Query:  485 SGTAWPEVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSIGAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALPRQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGNLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRRAAAEL 1366
            S  A   V+ +LK   A+A SGG+PG +A  LQV TLMW+RT +NYQ RYGTS   A   LY QGG+ RFY+G + A++  PLSRFG  AAN   + L +    +V V   T  AS+ AG +R+ L P+D  KT+LQVEG  G   LM KV  G  G LY GA AA+AAT VG++PWFL +N LN  L     +   LLR+A +G  SS  SD CSNSIRV+KT KQ        +TY     +++EKDG++GLFGRGLST+I++NG+Q +LF+V+WR   D Y   ++ A EL
Sbjct:   92 SKKAKKNVADILKHAGAKALSGGIPGMVAMALQVFTLMWMRTTINYQYRYGTSTMEAMRTLYAQGGIRRFYQGMLPALLQGPLSRFGDTAANTGMLALLE--DAEVPVMAKTVAASMAAGCFRIFLMPVDAIKTILQVEGQTGLNKLMDKVRIGGPGVLYHGALAASAATFVGHYPWFLVYNSLNAALPVYKDLPKRLLRSAFMGFCSSFVSDCCSNSIRVIKTAKQTTTV---PMTYTQVVKMIIEKDGVVGLFGRGLSTKIISNGVQGILFSVLWRLGQDYYA--KKEAEEL 378          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig84.17407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPN3_9PHAE3.710e-18867.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPC0_9STRA6.770e-8149.49Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9D315_9STRA1.240e-7651.31Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A448ZHR9_9STRA2.660e-7649.64Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A5A8BYU3_CAFRO9.940e-7650.17Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A7S2UB41_9STRA1.170e-7547.18Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
F2USX5_SALR51.770e-7551.96MC family transporter n=1 Tax=Salpingoeca rosetta ... [more]
A0A836B9G0_9CHLO2.300e-7548.84Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A7S2V2G3_9STRA3.720e-7548.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0UTU9_9CHLO4.790e-7448.98Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig84contigL-elsbetiae_contig84:33492..37490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score540.0
Seed ortholog evalue1.1e-150
Seed eggNOG ortholog2880.D8LI24
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Mitochondrial carrier protein
EggNOG OGs28MPG@1,2QU7F@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-04_002970.1
Exons5
Model size1882
Cds size1455
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816922.3485482-UTR-L-elsbetiae_contig84:33491..335371622816922.3485482-UTR-L-elsbetiae_contig84:33491..33537Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig84 33492..33537 +
1691683914.657179-UTR-L-elsbetiae_contig84:33491..335371691683914.657179-UTR-L-elsbetiae_contig84:33491..33537Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig84 33492..33537 +
1622816922.4163246-UTR-L-elsbetiae_contig84:37109..374901622816922.4163246-UTR-L-elsbetiae_contig84:37109..37490Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig84 37110..37490 +
1691683914.7277434-UTR-L-elsbetiae_contig84:37109..374901691683914.7277434-UTR-L-elsbetiae_contig84:37109..37490Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig84 37110..37490 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816922.360631-CDS-L-elsbetiae_contig84:33537..335541622816922.360631-CDS-L-elsbetiae_contig84:33537..33554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 33538..33554 +
1691683914.671884-CDS-L-elsbetiae_contig84:33537..335541691683914.671884-CDS-L-elsbetiae_contig84:33537..33554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 33538..33554 +
1622816922.3707242-CDS-L-elsbetiae_contig84:33728..344641622816922.3707242-CDS-L-elsbetiae_contig84:33728..34464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 33729..34464 +
1691683914.6838133-CDS-L-elsbetiae_contig84:33728..344641691683914.6838133-CDS-L-elsbetiae_contig84:33728..34464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 33729..34464 +
1622816922.3809657-CDS-L-elsbetiae_contig84:34797..349321622816922.3809657-CDS-L-elsbetiae_contig84:34797..34932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 34798..34932 +
1691683914.6937566-CDS-L-elsbetiae_contig84:34797..349321691683914.6937566-CDS-L-elsbetiae_contig84:34797..34932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 34798..34932 +
1622816922.3914711-CDS-L-elsbetiae_contig84:36098..364041622816922.3914711-CDS-L-elsbetiae_contig84:36098..36404Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 36099..36404 +
1691683914.7089307-CDS-L-elsbetiae_contig84:36098..364041691683914.7089307-CDS-L-elsbetiae_contig84:36098..36404Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 36099..36404 +
1622816922.4048681-CDS-L-elsbetiae_contig84:36848..371091622816922.4048681-CDS-L-elsbetiae_contig84:36848..37109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 36849..37109 +
1691683914.7178192-CDS-L-elsbetiae_contig84:36848..371091691683914.7178192-CDS-L-elsbetiae_contig84:36848..37109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig84 36849..37109 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig84.17407.1prot_L-elsbetiae_contig84.17407.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig84 33538..37109 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig84.17407.1

>prot_L-elsbetiae_contig84.17407.1 ID=prot_L-elsbetiae_contig84.17407.1|Name=mRNA_L-elsbetiae_contig84.17407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=485bp
MKAPQRSCRRQLACLVLLWVSLVQGHAPSAMLLDSTKEPGAPSEHTSPAP
GCSRSDGVAAPTSALLQAGTSSHSPGVDCISTPASALPSNSAMLGDRQTA
AGRLAARELTGGGWGSSHRGRRSQARRPPPQPPAGEIRTYAMNRSISGTA
WPEVSRVLKKCLARAGSGGLPGAMAGLLQVVTLMWLRTIVNYQCRYGTSI
GAAASELYRQGGVLRFYRGFVFAIVSNPLSRFGMAAANEAAIGLTDALPR
QVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGG
NLGCLYQGATAAAAATAVGYFPWFLTFNYLNGRLRKPSAMAWMLLRNAGI
GLASSVSSDVCSNSIRVLKTTKQAAAAYDAKVTYRGAAALVMEKDGLLGL
FGRGLSTRILANGLQSMLFTVVWRYLHDKYVVPRRAAAELREAKTQGIGG
SSTRSSRGGADRQKQQEQQQQRFSSTPARIGRDK*
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mRNA from alignment at L-elsbetiae_contig84:33492..37490+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig84.17407.1 ID=mRNA_L-elsbetiae_contig84.17407.1|Name=mRNA_L-elsbetiae_contig84.17407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3999bp|location=Sequence derived from alignment at L-elsbetiae_contig84:33492..37490+ (Laminarionema elsbetiae ELsaHSoW15)
CTTGTTAAACTGGCGTACACCCACGCAGTGTGGACGCATCATAGCCATGA AGGCTCCCCAGAGGTAAGCGCGACTGTGCTGAATGGCTCTACTGGGCCAA CCCTCTCTGAACCGTTGTGCAACAACAGCGGTGTGTCTTGCCTTGTTCGA CAGAGTAGTTCAATTTTCAAATGTGCTCAACACGCGGGTTGCAGCTCCTC TAATCCTAATCCTTTCCATCCATTGCGACGCTGGCAGGAGCTGCCGACGA CAGTTGGCCTGCCTGGTTCTGCTATGGGTTAGCTTAGTTCAAGGCCATGC CCCCAGTGCAATGCTGCTGGACTCTACAAAGGAGCCGGGCGCACCGTCGG AGCATACTAGCCCGGCACCAGGTTGTAGTCGAAGTGATGGCGTCGCCGCT CCAACATCAGCCTTATTACAAGCGGGTACATCTTCGCACAGCCCGGGAGT TGATTGCATCTCCACACCAGCTTCAGCTTTGCCATCAAACAGCGCAATGC TGGGTGATCGCCAGACAGCAGCGGGGCGGCTGGCAGCGCGTGAGCTCACC GGCGGGGGCTGGGGCTCCTCTCATCGCGGCCGCCGCAGCCAAGCGCGGCG ACCGCCGCCTCAGCCACCAGCAGGCGAAATCAGGACCTATGCCATGAATC GGAGCATCAGTGGCACCGCCTGGCCAGAGGTCAGCCGTGTTCTGAAGAAA TGCCTAGCGAGGGCCGGCAGCGGAGGCCTCCCGGGAGCGATGGCCGGCCT CTTGCAGGTCGTCACCCTCATGTGGCTGAGGACGATCGTGAATTATCAGT GCCGGTACGGCACTTCCATCGGGGCCGCGGCCTCCGAGCTGTACCGGCAG GGCGGAGTGCTACGGTTTTACAGGGGGTTCGTCTTCGCCATCGTGTCCAA CCCTTTGTCGAGGTTTGGGATGGCGGCCGCCAACGAGGCTGCCATAGGCC TCACCGATGCACTTCCCAGGCAGGTACAGAAGTACATTAGCGTGGTGTTG CCAGAGAACAGAGCCGGGCGCGCTTGATCAGCACGGGGCAAAACTATTGT GCGTATTTGTCGGTGTTTCGAACAAAGCAAGCGCACGTACCAGCACCCCA TCTGTTGATCTGACGTTGGTTTGCTGTTCCCTCCGTTCGCCCAAACCGAG CACGCTACAACAGACAGACTACCTTTCAACTTACATGAGAAGCGAGGAGA GAGCATTTTGCAACAAGCCCTGACGTTGTAGCAAGCCCACTATCGCCTGT TTCACTTAGAGTTATTTCGCCGCCTACTCTGACCCGGAGCTGTAACACCC CCACAGGTCTCCGTGACTTTCACGACGTGGATCGCCAGTCTCTTCGCTGG GGTATGGAGAGTGGTGTTGACGCCACTGGACACTTGCAAGACCGTACTTC AGGTGGAAGGTCCCAAAGGATTTGCCTCGTTGATGAAAAAGGTGAGCGCA GCGACTGCTGTTGGTGCGTGCGGCCACTGCACACGGCGTTCCGTCACGCA TTTTCGGCATATGTGGACACCCGGGTGTGTCTCTCAGCCGAGCTTCTTAG AACGCAAATCTGAGTCGGCTAGTTCTACTGGGCAGTACCGTAAAAGTGCG GGCAGTGCTATCGCACCCGGTATGAAGGAATTTACTTCTATTTTCGCACA GGGGTCAGTGCTATCGCACACTGTACGATAGCATCGACCACAAAACAATC GACTTTCTGGTGTGATGCTGCGTGATATGGCGAGTGAGTGAAAGGGCCAA ATCCGACCAAGCCGCAATACTTTGTGCGTGTTTGTCTGCGAAACGGCAAG TCGGCGGATACACTTGTATGCGTATCTACACGTAACACAAAATGGACATA TTTTCATCACTTTTCGGCAATCAACTACACGCGCGAAAAATCCTAGAACC CTAACCCAAAGCACACACTTTTACGGTACACAATTTACTCAGTATCGCAC ATGTCGGAGTTATCGCACAGGGGTGTGCGCTAGAAGAGCAGAACCAAAAC ATTTAATTCGATTTACGCACAGGGATCACTGCTATCGCACATGTCGGTGC TATCGCACACTATGCGATAAAAAAAGGCAGTTTGAAATGATTTTAAAAGT CGACCGCACAGTAGTGTGCGATAGCACGCACTTTTACGGTATCTCGGAGT TGACGACATGGTCTGGCAACATCGCAGCTCTTGGTGTGTTATGGAGGTTG CCGAGGAGCAGCCCCCTTTCACAGAAGTCTCCTCGTTGGCGCCGAGTGTA CTCGTTGGTATCACATGACAACAGCAGGTGGGTTTCGAGCAGACAACGAG CGTGGGTGTGGAAGTAGCAGCAGCAGTAGCACCACTACCAGCAGCAAGAT AACCATGAATCTTAATCTTTAGCTGCCTCTCCTGCATCTGTGCTGAATTT CATCACTGCTTGAGCCTGATGAACAAGCGCTCGTGTCGTTTGCTGGGAGC AACGGATGTTGTGTGCTGGTCCGCTGCCTCCTTCTTCCGTTGTCCTCTTG GCGCCTTTCTGTACACATGCCAAAGCGCAAAATCCGCTCATCTGCTGGCA CCCAAATTTCCTCGCGGGCTGCTTGTGTTTTTTCACCGCTTTCTGCTGCA ACAACAGGTATGGGGTGGCAACCTTGGTTGCCTCTACCAGGGAGCAACCG CCGCGGCTGCAGCGACGGCCGTGGGCTATTTCCCGTGGTTCTTGACCTTC AACTACCTGAACGGACGGCTTAGAAAGCCCTCGGCCATGGCGTGGATGCT CCTGCGGAACGCGGGGATCGGCCTGGCATCGTCGGTGTCGTCTGACGTGT GCTCCAACTCCATCCGCGTGCTCAAGACTACCAAACAAGCAGCCGCCGCG TACGACGCGAAGGTTACGTACAGGGGGGCGGCGGCCCTCGTGATGGAAAA GGACGGCTTGCTGGTGAGCTCTTTCTTTTCATTGGATGGGGCTCATCATC CTCCCAGATTTTCGCCTGCACTCGTACAACTCCTTCTATACTTTGCGACA ACGTACCCGCTCCCTGCCGCGCCAGCCTCGCTCGGTGAAATCCCGGCGTG ATCCGTCCCGGCTTTGTAGGAATATGCGAGAGTATTTGTGGTTCACTTGG TGACTTTGTGGCCATTTGAAAACGGAAAAGAGACCAAACCTTCCAAATTG TTCATAACTCTTATTGTTCAAGAGTGAAATTGTGCTGCTGCAGTATTGCT GCTATGCAATACGAAGGGCTAACTCAACCATCACCGGTTGGAACCCAGCA CCCTACACCTTTTAAAGGTTTGCCTATATATTATTTGGTCTCACTTTCCG ATGGCCTCCCTGACCTACTTACCCATTCCCGCGACTCTTCGACGTTATGC GCCTCAGGGCTTGTTCGGGAGGGGCCTATCAACTCGCATCCTTGCTAACG GTTTGCAGTCGATGCTCTTCACAGTGGTCTGGCGCTACCTGCACGACAAG TATGTGGTGCCAAGGCGGGCAGCCGCCGAGTTGCGGGAAGCGAAGACTCA GGGCATTGGTGGCAGCTCCACAAGGAGCAGTAGAGGTGGAGCAGATCGGC AGAAGCAGCAGGAGCAACAGCAGCAGCGGTTTTCATCCACCCCTGCAAGA ATAGGCAGGGATAAATAGCAGCGGTGATCTTGAAAGGCGGTGCTAGATAC CGTGACGATCGATACCAGCATTAAACGCGAAATGGTGGATTTGGATTTGA CCCTCTACCTCATAGGCTATGCACTCTCATTTCCTGTGATGTAGACGAGG AAGTGCCGAGCTTGTCAAGCGAAGCTTACAGGTGTGGGTAGGGTAGAGTG ACTCGAAGGAGAGGAGGTATCGTGGACCTCCTTCTTGGGTTGGGGCCCTC CTTCCTTGGCAGGGACGATGAACCCACCTTGAAAATATTCACGGGGCATT CGGCATTTCTTGCCGGCGACTGCATTTTACTTTACTGGTTGTGCATGTGT GTACAACTGCTGTCTGGGAATCAAACTGTAGACCATCTGTCATCCGCGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig84:33492..37490+

>mRNA_L-elsbetiae_contig84.17407.1 ID=mRNA_L-elsbetiae_contig84.17407.1|Name=mRNA_L-elsbetiae_contig84.17407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2910bp|location=Sequence derived from alignment at L-elsbetiae_contig84:33492..37490+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGCTCCCCAGAGATGAAGGCTCCCCAGAGGAGCTGCCGACGACAG
TTGGCCTGCCTGGTTCTGCTATGGGTTAGCTTAGTTCAAGGCCATGCCCC
CAGTGCAATGCTGCTGGACTCTACAAAGGAGCCGGGCGCACCGTCGGAGC
ATACTAGCCCGGCACCAGGTTGTAGTCGAAGTGATGGCGTCGCCGCTCCA
ACATCAGCCTTATTACAAGCGGGTACATCTTCGCACAGCCCGGGAGTTGA
TTGCATCTCCACACCAGCTTCAGCTTTGCCATCAAACAGCGCAATGCTGG
GTGATCGCCAGACAGCAGCGGGGCGGCTGGCAGCGCGTGAGCTCACCGGC
GGGGGCTGGGGCTCCTCTCATCGCGGCCGCCGCAGCCAAGCGCGGCGACC
GCCGCCTCAGCCACCAGCAGGCGAAATCAGGACCTATGCCATGAATCGGA
GCATCAGTGGCACCGCCTGGCCAGAGGTCAGCCGTGTTCTGAAGAAATGC
CTAGCGAGGGCCGGCAGCGGAGGCCTCCCGGGAGCGATGGCCGGCCTCTT
GCAGGTCGTCACCCTCATGTGGCTGAGGACGATCGTGAATTATCAGTGCC
GGTACGGCACTTCCATCGGGGCCGCGGCCTCCGAGCTGTACCGGCAGGGC
GGAGTGCTACGGTTTTACAGGGGGTTCGTCTTCGCCATCGTGTCCAACCC
TTTGTCGAGGTTTGGGATGGCGGCCGCCAACGAGGCTGCCATAGGCCTCA
CCGATGCACTTCCCAGGCAGGAGCTGCCGACGACAGTTGGCCTGCCTGGT
TCTGCTATGGGTTAGCTTAGTTCAAGGCCATGCCCCCAGTGCAATGCTGC
TGGACTCTACAAAGGAGCCGGGCGCACCGTCGGAGCATACTAGCCCGGCA
CCAGGTTGTAGTCGAAGTGATGGCGTCGCCGCTCCAACATCAGCCTTATT
ACAAGCGGGTACATCTTCGCACAGCCCGGGAGTTGATTGCATCTCCACAC
CAGCTTCAGCTTTGCCATCAAACAGCGCAATGCTGGGTGATCGCCAGACA
GCAGCGGGGCGGCTGGCAGCGCGTGAGCTCACCGGCGGGGGCTGGGGCTC
CTCTCATCGCGGCCGCCGCAGCCAAGCGCGGCGACCGCCGCCTCAGCCAC
CAGCAGGCGAAATCAGGACCTATGCCATGAATCGGAGCATCAGTGGCACC
GCCTGGCCAGAGGTCAGCCGTGTTCTGAAGAAATGCCTAGCGAGGGCCGG
CAGCGGAGGCCTCCCGGGAGCGATGGCCGGCCTCTTGCAGGTCGTCACCC
TCATGTGGCTGAGGACGATCGTGAATTATCAGTGCCGGTACGGCACTTCC
ATCGGGGCCGCGGCCTCCGAGCTGTACCGGCAGGGCGGAGTGCTACGGTT
TTACAGGGGGTTCGTCTTCGCCATCGTGTCCAACCCTTTGTCGAGGTTTG
GGATGGCGGCCGCCAACGAGGCTGCCATAGGCCTCACCGATGCACTTCCC
AGGCAGGTCTCCGTGACTTTCACGACGTGGATCGCCAGTCTCTTCGCTGG
GGTATGGAGAGTGGTGTTGACGCCACTGGACACTTGCAAGACCGTACTTC
AGGTGGAAGGTCCCAAAGGATTTGCCTCGTTGATGAAAAAGGTCTCCGTG
ACTTTCACGACGTGGATCGCCAGTCTCTTCGCTGGGGTATGGAGAGTGGT
GTTGACGCCACTGGACACTTGCAAGACCGTACTTCAGGTGGAAGGTCCCA
AAGGATTTGCCTCGTTGATGAAAAAGGTATGGGGTGGCAACCTTGGTTGC
CTCTACCAGGGAGCAACCGCCGCGGCTGCAGCGACGGCCGTGGGCTATTT
CCCGTGGTTCTTGACCTTCAACTACCTGAACGGACGGCTTAGAAAGCCCT
CGGCCATGGCGTGGATGCTCCTGCGGAACGCGGGGATCGGCCTGGCATCG
TCGGTGTCGTCTGACGTGTGCTCCAACTCCATCCGCGTGCTCAAGACTAC
CAAACAAGCAGCCGCCGCGTACGACGCGAAGGTTACGTACAGGGGGGCGG
CGGCCCTCGTGATGGAAAAGGACGGCTTGCTGGTATGGGGTGGCAACCTT
GGTTGCCTCTACCAGGGAGCAACCGCCGCGGCTGCAGCGACGGCCGTGGG
CTATTTCCCGTGGTTCTTGACCTTCAACTACCTGAACGGACGGCTTAGAA
AGCCCTCGGCCATGGCGTGGATGCTCCTGCGGAACGCGGGGATCGGCCTG
GCATCGTCGGTGTCGTCTGACGTGTGCTCCAACTCCATCCGCGTGCTCAA
GACTACCAAACAAGCAGCCGCCGCGTACGACGCGAAGGTTACGTACAGGG
GGGCGGCGGCCCTCGTGATGGAAAAGGACGGCTTGCTGGGCTTGTTCGGG
AGGGGCCTATCAACTCGCATCCTTGCTAACGGTTTGCAGTCGATGCTCTT
CACAGTGGTCTGGCGCTACCTGCACGACAAGTATGTGGTGCCAAGGCGGG
CAGCCGCCGAGTTGCGGGAAGCGAAGACTCAGGGCATTGGTGGCAGCTCC
ACAAGGAGCAGTAGAGGTGGAGCAGATCGGCAGAAGCAGCAGGAGCAACA
GCAGCAGCGGTTTTCATCCACCCCTGCAAGAATAGGCAGGGATAAATAGG
GCTTGTTCGGGAGGGGCCTATCAACTCGCATCCTTGCTAACGGTTTGCAG
TCGATGCTCTTCACAGTGGTCTGGCGCTACCTGCACGACAAGTATGTGGT
GCCAAGGCGGGCAGCCGCCGAGTTGCGGGAAGCGAAGACTCAGGGCATTG
GTGGCAGCTCCACAAGGAGCAGTAGAGGTGGAGCAGATCGGCAGAAGCAG
CAGGAGCAACAGCAGCAGCGGTTTTCATCCACCCCTGCAAGAATAGGCAG
GGATAAATAG
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