mRNA_L-elsbetiae_contig8381.17385.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8381.17385.1
Unique NamemRNA_L-elsbetiae_contig8381.17385.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A6H5JTR4_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTR4_9PHAE)

HSP 1 Score: 586 bits (1510), Expect = 2.870e-199
Identity = 367/568 (64.61%), Postives = 394/568 (69.37%), Query Frame = 3 
Query:    3 LLASGEGQEKAGGWGGSTKVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAGRVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGALAAKAYTPGLTFSGGSLGGVAEAAAALSATLPKMPRPLSSARPPLPLEFRAAIPVASSAPAPAAPSGSRASREAGAANGERGKAAALVAAPTAAGEXXXXXXXXXXXXXXXXXXXXAMGWPQRRIAAGMLAPPRTAHGIEFALASFSAPFVPSAPPPGSRMSTGSISGRGXXXXXXXXXXXXXTAAGDLVAPGAARQRSASQMNSRSVPPNXXXXXXSHLRSATAPMLPSPLLHHRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPADRPKPDALAAANGGGKT--------PPSDGAGLGFVPVADEVTPADVTVTAIASPSH 1682
            LL SGEGQEK GGWGG+TKVDGIGVGCTIVTALLDRKR QCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARI+AAGG VSRAGRVNDNLNLSRAIGDMVYKRN LRQ KDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNT Q       GLRAGSAPREVCE+LLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGALA KAYTP LTFSGG +G V EAAAA+SATLPK+PRPL +ARPPLP EFRAA+   ++APAP + S S+A+ EAGAAN E+  A A    P   G                      MGW QRRIAAG +APPRTAHGIEFALASFSAP V  AP  GSRMSTGSI+ RG              AAGDL     A+QR+AS+ +S SVPPNXXXXX +H RSATAPMLPSPL H                  XXXXXXXXXXXXXXX                                   P+   + D+ A   G GK          PS+  GL FVPV    TP++VTVTA ASP H
Sbjct:  224 LLKSGEGQEKTGGWGGATKVDGIGVGCTIVTALLDRKRRQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIMAAGGHVSRAGRVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTAQ-------GLRAGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGALATKAYTPALTFSGGRIGSVGEAAAAMSATLPKLPRPLRNARPPLPAEFRAAMSNGTTAPAPKSESESQAAEEAGAANREKPAAPAPETEPPGHGNASQQNATVGATESAGK-----MGWTQRRIAAGKVAPPRTAHGIEFALASFSAPIVAKAPAAGSRMSTGSINRRGVVTAATGAT----AAAGDLATSAVAKQRNASRASSSSVPPNXXXXXSNHPRSATAPMLPSPLWHXX----------------XXXXXXXXXXXXXXXIAVLAEVGAAGAVAASALAEETAAPSCQNPSANGKPSGMAEVDSTAEVCGQGKAGEESGRQASPSEDTGLVFVPVEPSATPSEVTVTATASPHH 759
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: E1ZRL9_CHLVA (Protein-serine/threonine phosphatase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZRL9_CHLVA)

HSP 1 Score: 189 bits (480), Expect = 2.530e-50
Identity = 101/182 (55.49%), Postives = 123/182 (67.58%), Query Frame = 3 
Query:   69 IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLL 605
            +  GCT V AL+   R   YVA+AGDSR VLCR GRA+ ++ DHKP  P E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N   + KDQII+AEPDV    +TP  D FL+LACDG+W++M   QVV FV   L  G+ P EV   LL+ACL+ DP+  R  GCDNMT  +V+L
Sbjct:  182 VQAGCTAVVALIMGDR--LYVANAGDSRAVLCRGGRALAMSEDHKPAAPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNSELEPKDQIITAEPDVTSARLTPE-DAFLVLACDGIWDVMTNQQVVDFVAPRLAGGAPPHEVASELLNACLANDPREARGIGCDNMTAAIVVL 360
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A1D2AGF2_AUXPR (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AGF2_AUXPR)

HSP 1 Score: 182 bits (463), Expect = 3.600e-50
Identity = 97/186 (52.15%), Postives = 124/186 (66.67%), Query Frame = 3 
Query:   69 IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWE 617
            +  GCT V ALL  +R   +VA+AGDSR VL R G AV L+ DHKP    E ARI+AAGG VS  G   RVN NLNLSRAIGD+ YK N   + KDQII+A+PD+C   + PG D F++LACDG+W++M+  QVV FV + L  G  P +    LL+AC++ DP+ TR  GCDNMT  +V+  G +
Sbjct:   43 VQAGCTAVVALLKGRR--LFVANAGDSRAVLARRGVAVPLSHDHKPSAAGERARIMAAGGFVSEVGGITRVNGNLNLSRAIGDLRYKANPALEAKDQIITAQPDLCVEALVPG-DRFMVLACDGIWDVMSNQQVVDFVGARLDEGLTPTQAASELLNACVASDPRETRGIGCDNMTASVVVFKGLD 225
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A2P6VJ19_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJ19_9CHLO)

HSP 1 Score: 186 bits (472), Expect = 2.760e-49
Identity = 102/203 (50.25%), Postives = 132/203 (65.02%), Query Frame = 3 
Query:    9 ASGEGQEKAGGWGGSTKVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLLD 608
            A+ EG+E AG   G      +  GCT V AL+   R   YVA+AGDSR VLCR  +A+ ++ DHKP  P E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N   + KDQII+AEPD+ +  +TP  D FL+LACDG+W++M   QVV FV   L  G  P+++   LL+ACL+ DP+  R  GCDNMT  +V+ +
Sbjct:  151 AAQEGKEGAGA--GLQPEVTVQAGCTAVVALI--VRDMLYVANAGDSRAVLCRGSKALPMSEDHKPAAPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNSELEPKDQIITAEPDIMQQQLTPD-DRFLVLACDGIWDVMTNQQVVDFVAQRLAQGQQPQDISSELLNACLASDPREARGIGCDNMTAAIVVFE 348
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A2V0P9L2_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9L2_9CHLO)

HSP 1 Score: 188 bits (477), Expect = 3.130e-49
Identity = 104/191 (54.45%), Postives = 124/191 (64.92%), Query Frame = 3 
Query:   69 IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGALAA 632
            I  GCT V A++  K G  YVA+AGDSR VLCR G A+ ++ DHKP   SE  RI+ AGG +S  G   RVN NLNLSRAIGD+ YK NR  + KDQII+AEPDV +  + P  DEF +LACDGVW++M     V FVR  L  G AP +    LLDACL+ DPK  R  GCDNMT ++V L G   A AA
Sbjct:  281 IQAGCTAVVAVI--KAGHLYVANAGDSRGVLCRGGAALAMSEDHKPAQESERTRILNAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNRTLEAKDQIITAEPDVRKVALQPE-DEFFLLACDGVWDVMTNQDAVDFVRERLSQGVAPTDAACQLLDACLASDPKEARGVGCDNMTAIVVSLRGEAFAGAA 468
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A2J8AE65_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AE65_9CHLO)

HSP 1 Score: 182 bits (462), Expect = 1.840e-48
Identity = 96/182 (52.75%), Postives = 119/182 (65.38%), Query Frame = 3 
Query:   69 IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLL 605
            +  GCT V A+  +   + YVA+AGDSR VLCR G+AV L+ DHKP    E  RI+AAGG +S  G   RVN NLNLSRAIGD+ YK N     KDQIISA+PD+ R  ++P  D F +LACDGVW++M+    + FV + L  G  P +    LLDACL+ DPK  R  GCDNMTVV+V L
Sbjct:  179 VQAGCTAVVAV--KLGSELYVANAGDSRGVLCRGGKAVALSEDHKPAQEGERNRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNVELPAKDQIISAQPDIRRITLSPTEDRFFLLACDGVWDVMSNQDAIDFVGAKLEQGMTPSQASCALLDACLASDPKEARGVGCDNMTVVIVQL 358
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A2P6V0S6_9CHLO (Phosphatase 2c n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0S6_9CHLO)

HSP 1 Score: 186 bits (471), Expect = 2.280e-48
Identity = 97/183 (53.01%), Postives = 130/183 (71.04%), Query Frame = 3 
Query:   66 GIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAGRVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLLDGW 614
            G   GCT V A++  + G+ YVA+AGDSRCVL RAG AV +T+DHKP    EYARI+ AGG V+  GRVN +LNLSRA+GD+ YK+ +    ++Q+++A P+V R  + PG DEFL+LACDG+W+++   + V FVR  L AG  P+EVCE++ D CL+PD  G    GCDNM+VV+VLL  W
Sbjct:  314 GPSAGCTAVCAVV--RGGELYVANAGDSRCVLSRAGTAVAMTQDHKPMDTEEYARIMKAGGFVAD-GRVNGSLNLSRALGDLEYKQTKELGPEEQMVTAFPEVRRITLQPG-DEFLLLACDGIWDVLTNQEAVDFVRERLAAGRTPKEVCEDVCDRCLAPDTGGCGK-GCDNMSVVVVLLKEW 491
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A7S3QQ46_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QQ46_DUNTE)

HSP 1 Score: 179 bits (454), Expect = 4.580e-48
Identity = 95/182 (52.20%), Postives = 119/182 (65.38%), Query Frame = 3 
Query:   69 IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLL 605
            +  GCT V A+  +   + YVA+AGDSR VLCR   AV L+ DHKP    E +RI+AAGG +S  G   RVN NLNLSRAIGD+ YK +     KDQII+AEPD+C+  +TP  D F +LACDG+W++M+   VV FV   L  G +P +    LLDACL+ DPK  R  GCDNMT V+V L
Sbjct:   82 VQAGCTAVVAI--KCGDKLYVANAGDSRGVLCRGSTAVPLSEDHKPASERERSRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKSSTELPAKDQIITAEPDICQITLTPE-DRFFVLACDGIWDVMSNQDVVDFVSQKLDMGMSPSQTASALLDACLANDPKEARGVGCDNMTAVVVSL 260
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A2P6U558_CHLSO (Protein-serine/threonine phosphatase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U558_CHLSO)

HSP 1 Score: 190 bits (482), Expect = 5.680e-48
Identity = 101/189 (53.44%), Postives = 126/189 (66.67%), Query Frame = 3 
Query:   69 IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGAL 626
            I  GCT V AL+     Q YVA+AGDSR VLCR G+AV ++ DHKP  P E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N   + KDQII+AEPDV    +T   D FL+LACDG+W++M+  QVV FV   L  G APR++   LL++CL+ DP+  R  GCDNMT  +V+ +   G L
Sbjct:  591 IQAGCTAVVALI--VHDQLYVANAGDSRAVLCRGGKAVPMSEDHKPAQPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNNELEPKDQIITAEPDVLTQRLTRD-DSFLVLACDGIWDVMDNQQVVDFVHQRLAKGIAPRDIASELLNSCLANDPREARGIGCDNMTAAIVVFEPSSGPL 776
[Close]
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Match: A0A7S3QPP9_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QPP9_DUNTE)

HSP 1 Score: 174 bits (441), Expect = 3.190e-47
Identity = 90/163 (55.21%), Postives = 110/163 (67.48%), Query Frame = 3 
Query:  126 YVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGRVSRAG---RVNDNLNLSRAIGDMVYKRNRLRQTKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPREVCENLLDACLSPDPKGTRYAGCDNMTVVLVLL 605
            YVA+AGDSR VLCR   AV L+ DHKP    E +RI+AAGG +S  G   RVN NLNLSRAIGD+ YK +     KDQII+AEPD+C+  +TP  D F +LACDG+W++M+   VV FV   L  G +P +    LLDACL+ DPK  R  GCDNMT V+V L
Sbjct:   18 YVANAGDSRGVLCRGSTAVPLSEDHKPASERERSRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKSSTELPAKDQIITAEPDICQITLTPE-DRFFVLACDGIWDVMSNQDVVDFVSQKLDMGMSPSQTASALLDACLANDPKEARGVGCDNMTAVVVSL 179
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8381.17385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTR4_9PHAE2.870e-19964.61PPM-type phosphatase domain-containing protein n=2... [more]
E1ZRL9_CHLVA2.530e-5055.49Protein-serine/threonine phosphatase n=1 Tax=Chlor... [more]
A0A1D2AGF2_AUXPR3.600e-5052.15PPM-type phosphatase domain-containing protein (Fr... [more]
A0A2P6VJ19_9CHLO2.760e-4950.25Protein-serine/threonine phosphatase n=1 Tax=Micra... [more]
A0A2V0P9L2_9CHLO3.130e-4954.45Protein-serine/threonine phosphatase n=1 Tax=Raphi... [more]
A0A2J8AE65_9CHLO1.840e-4852.75Protein-serine/threonine phosphatase n=1 Tax=Tetra... [more]
A0A2P6V0S6_9CHLO2.280e-4853.01Phosphatase 2c n=1 Tax=Micractinium conductrix Tax... [more]
A0A7S3QQ46_DUNTE4.580e-4852.20Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A2P6U558_CHLSO5.680e-4853.44Protein-serine/threonine phosphatase n=1 Tax=Chlor... [more]
A0A7S3QPP9_DUNTE3.190e-4755.21Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8381contigL-elsbetiae_contig8381:2131..6910 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.2
Seed ortholog evalue7.7e-131
Seed eggNOG ortholog2880.D7FSC8
KEGG koko:K01090,ko:K01265,ko:K04457,ko:K14803,ko:K17499,ko:K19705
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
EC3.1.3.16,3.4.11.18
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03009
Exons5
Model size1807
Cds size1494
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816920.4089272-UTR-L-elsbetiae_contig8381:2130..22341622816920.4089272-UTR-L-elsbetiae_contig8381:2130..2234Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8381 2131..2234 -
1691683913.1641257-UTR-L-elsbetiae_contig8381:2130..22341691683913.1641257-UTR-L-elsbetiae_contig8381:2130..2234Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8381 2131..2234 -
1622816920.4642801-UTR-L-elsbetiae_contig8381:6260..63471622816920.4642801-UTR-L-elsbetiae_contig8381:6260..6347Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8381 6261..6347 -
1691683913.2278912-UTR-L-elsbetiae_contig8381:6260..63471691683913.2278912-UTR-L-elsbetiae_contig8381:6260..6347Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8381 6261..6347 -
1622816920.474599-UTR-L-elsbetiae_contig8381:6788..69101622816920.474599-UTR-L-elsbetiae_contig8381:6788..6910Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8381 6789..6910 -
1691683913.2378948-UTR-L-elsbetiae_contig8381:6788..69101691683913.2378948-UTR-L-elsbetiae_contig8381:6788..6910Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8381 6789..6910 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816920.420134-CDS-L-elsbetiae_contig8381:2234..34781622816920.420134-CDS-L-elsbetiae_contig8381:2234..3478Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 2235..3478 -
1691683913.1820114-CDS-L-elsbetiae_contig8381:2234..34781691683913.1820114-CDS-L-elsbetiae_contig8381:2234..3478Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 2235..3478 -
1622816920.4295745-CDS-L-elsbetiae_contig8381:4316..43961622816920.4295745-CDS-L-elsbetiae_contig8381:4316..4396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 4317..4396 -
1691683913.1918356-CDS-L-elsbetiae_contig8381:4316..43961691683913.1918356-CDS-L-elsbetiae_contig8381:4316..4396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 4317..4396 -
1622816920.4393554-CDS-L-elsbetiae_contig8381:5434..55771622816920.4393554-CDS-L-elsbetiae_contig8381:5434..5577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 5435..5577 -
1691683913.20348-CDS-L-elsbetiae_contig8381:5434..55771691683913.20348-CDS-L-elsbetiae_contig8381:5434..5577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 5435..5577 -
1622816920.4505372-CDS-L-elsbetiae_contig8381:6233..62601622816920.4505372-CDS-L-elsbetiae_contig8381:6233..6260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 6234..6260 -
1691683913.2182229-CDS-L-elsbetiae_contig8381:6233..62601691683913.2182229-CDS-L-elsbetiae_contig8381:6233..6260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8381 6234..6260 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8381.17385.1prot_L-elsbetiae_contig8381.17385.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8381 2235..6260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8381.17385.1

>prot_L-elsbetiae_contig8381.17385.1 ID=prot_L-elsbetiae_contig8381.17385.1|Name=mRNA_L-elsbetiae_contig8381.17385.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=498bp
MPSEYARIVAAGGRVSRAGRVNDNLNLSRAIGDMVYKRNRLRQTKDQIIS
AEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVTFVRSGLRAGSAPRE
VCENLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGALAAKAYTPGLTF
SGGSLGGVAEAAAALSATLPKMPRPLSSARPPLPLEFRAAIPVASSAPAP
AAPSGSRASREAGAANGERGKAAALVAAPTAAGETAAPGSKGGAAVAGAK
DNGAAMGWPQRRIAAGMLAPPRTAHGIEFALASFSAPFVPSAPPPGSRMS
TGSISGRGGAAAAAAAAAAASTAAGDLVAPGAARQRSASQMNSRSVPPNA
RRRSNSHLRSATAPMLPSPLLHHRPRRDPPSEERIASAAAVAVMAEVGAA
GAVAAAAAATAAAAAVTEENVAPAPPPCRHPPGDGGGGASPADRPKPDAL
AAANGGGKTPPSDGAGLGFVPVADEVTPADVTVTAIASPSHSVHSSV*
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mRNA from alignment at L-elsbetiae_contig8381:2131..6910-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8381.17385.1 ID=mRNA_L-elsbetiae_contig8381.17385.1|Name=mRNA_L-elsbetiae_contig8381.17385.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4780bp|location=Sequence derived from alignment at L-elsbetiae_contig8381:2131..6910- (Laminarionema elsbetiae ELsaHSoW15)
CACTGCTGGCGTCCGGAGAGGGACAGGAGAAAGCGGGAGGGTGGGGAGGG
TCGACCAAAGTGGATGGGATAGGCGTGGGCTGCACCATCGTAACGGCCCT
GCTGGACCGAAAAAGAGGACAGGTATGTATGTCCTGCGCGGTTGGTGGGT
GTAGCCTGTCGGCCGCCACGTGCTGGAAGGATTTTTTTCTTGGAGAGCGC
CTCTCTCTCCCCGGGGGGGGCGAGGGTTAGGATCCACCTTGTTGGTACCC
TTGCCTGGTGCTGGCAAGGATGTGAGCCTTGGTGGCGGTTACGCCACGCT
TCTTTTTTGTGTCGCGGTCGTGTGGTTTGCCAGGAGGGCTGTGCTACTGT
ATGTACTGGTATGTAGCAGTGCTGCCCTTTTTGGCGTTTTGACTCCCGCC
ATGGGTCGTTTGGCCGCTCGCTTGCAGTCGGCTTGTACTACTGCTTCTAC
CCTCTCTCTTTCTCTGGGTTGGTGTTGACTATTCGTGCGTCGTCGTCGAC
GTGTGGGTCGCCAATCGTCAACCCAATTCTCTTTTTCGTGACCCCCCCCC
CCTGTTCGTCCAGTGCTACGTGGCCCACGCGGGTGACTCGCGGTGCGTGT
TATGCCGTGCTGGGCGTGCCGTCCAGCTGACCAGAGATCACAAGCCAGGA
ATGCCGTCGGAGTACGCGAGGATAGTGGTGAGATTGTGATGTACACACAT
GCATACTTCTTGTGTACTTTACGTAAAACGTTCGACGTCTGCCGGCAGCA
GAAGTCGCGGCTTCGAATTTTGCTGTGTAGCGAGGAGGACGCGAGCTTTC
TAATTATAGTGGGTCTTTGCTGCAGTTTTGCTGCTGAGGTGGAAACAGTC
TGGGTGCGCTATTTCGCGTGTGTTTGGACGCCGGTTGCACGATGAAAGGA
CGTTGGTAAAGACCTGACCCATGGCTCTGATATTTATTATATTGAGTGAG
AGCCACGCGGTCTCTCTGCAGCACACAAAGTCAGTACTTGTAGTGTGTCC
GCACATACCCACGCGAAATCAAATCATCCACACAATCCCCAAAGATCCTG
CGAACTGTAGCTAGTGCCTGCCTACCTAGTGCAACCTAGCAGCGTGTTTT
CCACTCAACAAAAGCTGAAAGTCAGGTCCGGGTGGCAAGAGGAGACCTGC
GGACACTCTCTGCCGGTGCTGCACAGAAACCGCTACATAGGTATACCTAC
CTACGTAAATACTTTCTGTAGCGGGGGATTTTTTTTTTTTTTTTGCATGG
CATCGTGTGCTCCCGGCGTGTGATTCTCAGCTATTATGGGGGATTTTTAA
TCCTTCAACTCTCCCATGTCGTGCGCGATCCAGGCAGCTGGCGGGCGCGT
GTCGCGAGCCGGGCGAGTCAACGACAACCTGAACCTCTCTCGCGCCATCG
GCGACATGGTGTACAAGAGAAACCGGCTTCGACAGACGAAGGATCAGATT
ATCTCCGCCGAGCCTGATGTTTGCAGGTGTGCGTGGGACTGGCCGAAAAA
ACTGTGTCGTCATCCGTCTATCTGGAAGTAGGAAAAGCGCGAGTGCTCGA
TATCAGATGAGCGTGTGTAGTGTAGTTGAAAACCGTTTAAGGTTCAACAC
GAGGAAGCTCGGCGGTTTGCACCGGTGGGTGGTCCGAACATGCCGCGTCG
TTTGGAGGAAGTGATCGTGCTCTCCGGTGCAACTGTGTGCTGGCCGGGCT
CACGGTGTCGCTTATACCGCCGTGGATGTAGTGCAAGCACGCACACGTAC
ATACCCAGCCCACTGCGATGTACAATGAGCCTGTTCCCTGCTCTACAATA
TGCATGTGGTGCTCGTGTGTGGGGCTGCTGCGGGCTCCGTCTGTTTTGGG
TTGTCATCAAAGCCCACGGCAGTCAACGTACCCAAGAAGCGTGAAGGGAA
AACCCAGCGTCGTGGTTCCCTTCTAGTCTCGTGTCCTGTTCTACATGTGT
GTTTATGTCCTTCCGGCTTGGCTGGTCCTGCCGACGACTCGAAGTCTGAT
AAGGTTTCGCGCTGTCAATTCCTTGCGGGTCCTGGTAATTGATAATTTGT
ATTAAATCCGTCCTTTAGCTAACGAGCTGTCCCGAGTTGTGATCAGCGGG
GGGAGAAGAGGTAGGCTCTCTCCAAAATCCTAACCAATCAGAAGACAACG
GGAAATACGATCCCGCCGCATTTCCTATGCACATGAAAGTGCAACAAATG
CCGTTGGATTGTATCTTCGCAGCAAGATATACCCGCGCTATCTTGGCAGC
TGTATCACTGCTGTGTGACCCGTGATATCAAACCCAAAAGCCAGCCTGAC
GGCTCTCTTCTAGTCTCATGTCCTGTTCTACATATGGATGCCATGCCGGC
TTGCTGCCGCAACCACGAGTCTAGATTTTTGTGTGCCCCCTGGCAGGAAC
AGGACGCACGGCGTGCAGCACGTGGCCAGATGTGTATATATATATATACT
TCTATATATTACCGTTGACCCCGCCCGCTGCCCGCGCACAAAACAAATCA
CAACCGCATGGCAGGTTCCTTGTGACTCCTGGGGTGGACGAGTTTTTAAT
ACTCGCCTGCGACGGCGTGTGGGAGATGATGAACACGACGCAAGGTGTGT
GTGTCTGTGTGTGTGCGTGCGTGTTTGTCCCTCCGCTTTGTGTTGGAAAT
TGGCATCGCCTCAGCAGGGGTATGTGGCGCCGAGGCAGGAAAAAGAGTGC
TGCCTACCTAAAACCTTGTGAGCGTTTATTCTCCGGGTCTGCTGTGCGCA
CTGGTGTGCATGCAACTTGCGGCTCTGTGGTTTGAGTGCTGAGTGTTTTC
GCGTCACCGCTTCTGCGTTTTAACACTGCGATGCGAGGAAGCTGAGGTGG
AACCATTTGGTACGGGGAAGACGAACACACTCGGCGCTGCTTGCTGTGCC
CAAACCCGCCCGTACTTTGCTCTCCCGTCAGAGGAGTTTTAATTAATGTA
TACAAATGTCAAGCAGTCTACGTCCGGTTTGTGAAAATATCGCTCCAGAG
GGATCTGTTGCAGGCATACTGTACTAACCCCCTTTTCTTCCCATCCCAAG
ATATACTCGCACAAAATCCGTAATCCATTTATCAATTCCGCACAGGCCAC
GGTGTACTTTGAAGATAAAATCAGAAACTCAAAAAACGGAACCCAACCCG
CATTCGAGACGGGACTCCGTAGACCTCAACCAGTATTCCATATAGGAGTA
GTGACGTAATACTGGTCCGGCCGGGTAGAAAAACATCTAAAACGTCCGAA
GAAATTCAACATCTCCCCTGCAGAGCTAGCTAGCTCTGCCTGGCCAAGCA
ACATGTATTTTATTATCTTTCGATCGGGTACAATCTGATGCCTCACACCG
CGATCGATTCCCCCCCGCCGTCGGCCTCGTACCCCCGTACCCCCGTGCCC
CCGTGCCCTCCCCCCCCCCCCCAAAAAAAAAGTCGTCACTTTCGTCCGGT
CAGGCCTGCGCGCGGGCTCCGCACCCCGGGAAGTGTGCGAAAACCTGCTA
GACGCCTGCCTGTCTCCCGACCCTAAGGGCACGCGGTACGCTGGCTGTGA
CAACATGACCGTGGTGCTGGTTCTGCTGGACGGGTGGGAGGGTGCGCTTG
CCGCGAAGGCGTACACCCCGGGCTTGACGTTTTCGGGGGGTAGTCTCGGC
GGCGTGGCGGAGGCTGCCGCGGCGCTGTCTGCGACGCTCCCCAAGATGCC
CCGGCCGTTGAGCAGCGCCCGCCCCCCACTCCCTTTAGAATTCCGGGCGG
CGATACCGGTGGCGAGTTCTGCACCGGCCCCGGCAGCCCCGAGTGGCTCG
CGAGCGTCTCGGGAGGCCGGAGCGGCGAACGGAGAGAGAGGTAAGGCAGC
GGCACTCGTAGCGGCGCCGACGGCAGCAGGGGAAACGGCAGCACCGGGTT
CCAAAGGAGGCGCAGCAGTCGCCGGCGCGAAGGACAATGGGGCGGCAATG
GGGTGGCCTCAGCGGAGAATAGCGGCGGGAATGCTGGCACCTCCCCGAAC
GGCCCATGGGATAGAGTTCGCGCTCGCGTCGTTCTCGGCACCTTTTGTCC
CCAGTGCCCCCCCGCCTGGTTCGCGCATGAGTACAGGAAGCATTAGCGGT
CGCGGTGGTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCATCGACCGC
CGCTGGTGACTTGGTGGCGCCAGGCGCGGCGAGGCAGCGCAGTGCGTCGC
AGATGAACAGCAGGTCGGTCCCGCCAAACGCTCGACGGCGGAGCAACAGC
CACCTGCGGTCCGCCACCGCGCCGATGCTGCCCTCCCCGCTGCTGCACCA
CCGGCCCCGCCGCGACCCTCCGTCGGAAGAGCGAATCGCCTCTGCGGCAG
CGGTCGCCGTGATGGCCGAGGTGGGCGCCGCGGGTGCCGTCGCTGCGGCC
GCCGCCGCCACCGCCGCCGCCGCCGCCGTAACGGAAGAAAATGTGGCACC
GGCGCCGCCGCCGTGTCGCCACCCACCAGGTGACGGCGGCGGCGGCGCAA
GCCCGGCGGATAGACCGAAGCCCGACGCTCTTGCTGCGGCGAACGGGGGG
GGGAAGACGCCGCCGTCGGACGGCGCCGGCCTGGGGTTCGTGCCCGTGGC
GGACGAGGTGACGCCCGCTGATGTCACCGTGACGGCGATCGCCTCTCCTT
CGCACTCGGTCCACTCTTCTGTCTAGAGGGCCTCTTGGGCCCCAGTTTTG
GCCTTGGCCGCTCGAGACCGCCGTGTTTATAGAGAGCTCGGCAGTTCGGC
GCCGAACAGCGTCCGTTCGTCCGTCCTTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8381:2131..6910-

>mRNA_L-elsbetiae_contig8381.17385.1 ID=mRNA_L-elsbetiae_contig8381.17385.1|Name=mRNA_L-elsbetiae_contig8381.17385.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2988bp|location=Sequence derived from alignment at L-elsbetiae_contig8381:2131..6910- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGTCGGAGTACGCGAGGATAGTGATGCCGTCGGAGTACGCGAGGAT
AGTGGCAGCTGGCGGGCGCGTGTCGCGAGCCGGGCGAGTCAACGACAACC
TGAACCTCTCTCGCGCCATCGGCGACATGGTGTACAAGAGAAACCGGCTT
CGACAGACGAAGGATCAGATTATCTCCGCCGAGCCTGATGTTTGCAGGCA
GCTGGCGGGCGCGTGTCGCGAGCCGGGCGAGTCAACGACAACCTGAACCT
CTCTCGCGCCATCGGCGACATGGTGTACAAGAGAAACCGGCTTCGACAGA
CGAAGGATCAGATTATCTCCGCCGAGCCTGATGTTTGCAGGTTCCTTGTG
ACTCCTGGGGTGGACGAGTTTTTAATACTCGCCTGCGACGGCGTGTGGGA
GATGATGAACACGACGCAAGGTTCCTTGTGACTCCTGGGGTGGACGAGTT
TTTAATACTCGCCTGCGACGGCGTGTGGGAGATGATGAACACGACGCAAG
TCGTCACTTTCGTCCGGTCAGGCCTGCGCGCGGGCTCCGCACCCCGGGAA
GTGTGCGAAAACCTGCTAGACGCCTGCCTGTCTCCCGACCCTAAGGGCAC
GCGGTACGCTGGCTGTGACAACATGACCGTGGTGCTGGTTCTGCTGGACG
GGTGGGAGGGTGCGCTTGCCGCGAAGGCGTACACCCCGGGCTTGACGTTT
TCGGGGGGTAGTCTCGGCGGCGTGGCGGAGGCTGCCGCGGCGCTGTCTGC
GACGCTCCCCAAGATGCCCCGGCCGTTGAGCAGCGCCCGCCCCCCACTCC
CTTTAGAATTCCGGGCGGCGATACCGGTGGCGAGTTCTGCACCGGCCCCG
GCAGCCCCGAGTGGCTCGCGAGCGTCTCGGGAGGCCGGAGCGGCGAACGG
AGAGAGAGGTAAGGCAGCGGCACTCGTAGCGGCGCCGACGGCAGCAGGGG
AAACGGCAGCACCGGGTTCCAAAGGAGGCGCAGCAGTCGCCGGCGCGAAG
GACAATGGGGCGGCAATGGGGTGGCCTCAGCGGAGAATAGCGGCGGGAAT
GCTGGCACCTCCCCGAACGGCCCATGGGATAGAGTTCGCGCTCGCGTCGT
TCTCGGCACCTTTTGTCCCCAGTGCCCCCCCGCCTGGTTCGCGCATGAGT
ACAGGAAGCATTAGCGGTCGCGGTGGTGCCGCCGCCGCCGCCGCCGCCGC
CGCCGCTGCATCGACCGCCGCTGGTGACTTGGTGGCGCCAGGCGCGGCGA
GGCAGCGCAGTGCGTCGCAGATGAACAGCAGGTCGGTCCCGCCAAACGCT
CGACGGCGGAGCAACAGCCACCTGCGGTCCGCCACCGCGCCGATGCTGCC
CTCCCCGCTGCTGCACCACCGGCCCCGCCGCGACCCTCCGTCGGAAGAGC
GAATCGCCTCTGCGGCAGCGGTCGCCGTGATGGCCGAGGTGGGCGCCGCG
GGTGCCGTCGCTGCGGCCGCCGCCGCCACCGCCGCCGCCGCCGCCGTAAC
GGAAGAAAATGTGGCACCGGCGCCGCCGCCGTGTCGCCACCCACCAGGTG
ACGGCGGCGGCGGCGCAAGCCCGGCGGATAGACCGAAGCCCGACGCTCTT
GCTGCGGCGAACGGGGGGGGGAAGACGCCGCCGTCGGACGGCGCCGGCCT
GGGGTTCGTGCCCGTGGCGGACGAGGTGACGCCCGCTGATGTCACCGTGA
CGGCGATCGCCTCTCCTTCGCACTCGGTCCACTCTTCTGTCTAGTCGTCA
CTTTCGTCCGGTCAGGCCTGCGCGCGGGCTCCGCACCCCGGGAAGTGTGC
GAAAACCTGCTAGACGCCTGCCTGTCTCCCGACCCTAAGGGCACGCGGTA
CGCTGGCTGTGACAACATGACCGTGGTGCTGGTTCTGCTGGACGGGTGGG
AGGGTGCGCTTGCCGCGAAGGCGTACACCCCGGGCTTGACGTTTTCGGGG
GGTAGTCTCGGCGGCGTGGCGGAGGCTGCCGCGGCGCTGTCTGCGACGCT
CCCCAAGATGCCCCGGCCGTTGAGCAGCGCCCGCCCCCCACTCCCTTTAG
AATTCCGGGCGGCGATACCGGTGGCGAGTTCTGCACCGGCCCCGGCAGCC
CCGAGTGGCTCGCGAGCGTCTCGGGAGGCCGGAGCGGCGAACGGAGAGAG
AGGTAAGGCAGCGGCACTCGTAGCGGCGCCGACGGCAGCAGGGGAAACGG
CAGCACCGGGTTCCAAAGGAGGCGCAGCAGTCGCCGGCGCGAAGGACAAT
GGGGCGGCAATGGGGTGGCCTCAGCGGAGAATAGCGGCGGGAATGCTGGC
ACCTCCCCGAACGGCCCATGGGATAGAGTTCGCGCTCGCGTCGTTCTCGG
CACCTTTTGTCCCCAGTGCCCCCCCGCCTGGTTCGCGCATGAGTACAGGA
AGCATTAGCGGTCGCGGTGGTGCCGCCGCCGCCGCCGCCGCCGCCGCCGC
TGCATCGACCGCCGCTGGTGACTTGGTGGCGCCAGGCGCGGCGAGGCAGC
GCAGTGCGTCGCAGATGAACAGCAGGTCGGTCCCGCCAAACGCTCGACGG
CGGAGCAACAGCCACCTGCGGTCCGCCACCGCGCCGATGCTGCCCTCCCC
GCTGCTGCACCACCGGCCCCGCCGCGACCCTCCGTCGGAAGAGCGAATCG
CCTCTGCGGCAGCGGTCGCCGTGATGGCCGAGGTGGGCGCCGCGGGTGCC
GTCGCTGCGGCCGCCGCCGCCACCGCCGCCGCCGCCGCCGTAACGGAAGA
AAATGTGGCACCGGCGCCGCCGCCGTGTCGCCACCCACCAGGTGACGGCG
GCGGCGGCGCAAGCCCGGCGGATAGACCGAAGCCCGACGCTCTTGCTGCG
GCGAACGGGGGGGGGAAGACGCCGCCGTCGGACGGCGCCGGCCTGGGGTT
CGTGCCCGTGGCGGACGAGGTGACGCCCGCTGATGTCACCGTGACGGCGA
TCGCCTCTCCTTCGCACTCGGTCCACTCTTCTGTCTAG
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