mRNA_L-elsbetiae_contig8373.17375.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A6H5KJS5_9PHAE (Non-specific serine/threonine protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJS5_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 6.980e-153 Identity = 272/340 (80.00%), Postives = 288/340 (84.71%), Query Frame = 1 Query: 1 SFGMSSYGRMPGGRDQGXXXXXXXXXXXXXXXXSNAQAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSA-GGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLVPFRRPQPPATNA----TGTTSSG 1005 SFGMSSYGR PGGRD G XXXXXXXXXXXXX +SSAGGHVGSIGWQAPEVIADRVSLEGGQGP +A GG A+SSLS SGSG ASSWAMAGGPS SSSRRTQAVD+FSLGCIFHHCIVPGSHPFGQWYEREANIIQ+KA+ ++EL HVPDAHDLVSLMTAREPDLRPSAGEVCKHP R + L QDAVQSPLLVMVEAGA SVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERV+ +MSPLPGGFLRYVE RFPQLLMHC KVTG+LLT+ERIF++YLV FRRPQPPA +GTT G Sbjct: 972 SFGMSSYGRAPGGRDHGQGGXXXXXXXXXXXXXXXX--SSSAGGHVGSIGWQAPEVIADRVSLEGGQGPLTAMGGGAESSLSTSRSGSGASASSWAMAGGPSLSSSRRTQAVDVFSLGCIFHHCIVPGSHPFGQWYEREANIIQDKASRITELEHVPDAHDLVSLMTAREPDLRPSAGEVCKHPFFWNEEKRLSFLLEFSDRLEQDAVQSPLLVMVEAGAHSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVQAMMSPLPGGFLRYVEERFPQLLMHCAKVTGSLLTEERIFRDYLVHFRRPQPPAAAXXAAPSGTTQPG 1309
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: W7U7T2_9STRA (Serine threonine protein kinase endoribonuclease ire1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7T2_9STRA) HSP 1 Score: 231 bits (588), Expect = 5.310e-65 Identity = 135/281 (48.04%), Postives = 176/281 (62.63%), Query Frame = 1 Query: 109 QAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLVP 951 +A SS GS+GWQAPEV+A R+ LE + AGG + + G G G +SS+ P +S RRTQAVD+FSLGC+F+ +VPG+HPFG+WYERE NI++ K LS L P+A L+ M + +P RP+A V HP R A + Q+ S L + VEAGA VVG +WD RLDA L D RYRKYD +SVRD LR++RNKRHHFHELPE V+ +++PLPGG RY + FP+LLMHC V LLT +++F+ Y+ P Sbjct: 396 EAQSSVPLGPGSVGWQAPEVLAARLGLE--DTGAVAGGREEEVGAGNGHGLAGSSSSFPA---PPSASGRRTQAVDVFSLGCVFYTVLVPGAHPFGEWYERERNILEGKRD-LSGLAESPEARHLLEAMLSPDPARRPTARMVLHHPFFWAEDRRLAFLVDFSDRVEQEPADSLLALAVEAGAAEVVGSAWDARLDAGLLVDVNRYRKYDTASVRDCLRILRNKRHHFHELPEAVQRVLAPLPGGLYRYWQRHFPRLLMHCHGVCTRLLTRDKLFQTYMGP 670
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A836CAG8_9STRA (Ribonuclease 2-5A-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG8_9STRA) HSP 1 Score: 214 bits (545), Expect = 3.410e-64 Identity = 106/196 (54.08%), Postives = 130/196 (66.33%), Query Frame = 1 Query: 316 RRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTH-VPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGV---QDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHC 891 RR QA D+F+LGCIF HC+ P +HPFG+W+EREAN+++ A L + +PDAHDLV M +PD RPSA +VC+HP G R V +D S LL+ VE A VVGR+WD R+DA L EDAGRYR YD +S RD LR+VRNKRHHFHELP + L++PLP G L YVE FP+LLMHC Sbjct: 75 RRAQAADVFALGCIFFHCLAPAAHPFGEWWEREANVLRGHAPQLPRIAAPLPDAHDLVRRMVRADPDARPSAADVCRHPFF--WGDERRLAFLVDFSDRLEREDGASSALLLCVERDAARVVGRAWDRRVDAALLEDAGRYRSYDRASARDFLRLVRNKRHHFHELPPAARALLAPLPSGLLHYVESLFPRLLMHC 268
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A4D9CQF7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQF7_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.700e-62 Identity = 135/291 (46.39%), Postives = 171/291 (58.76%), Query Frame = 1 Query: 109 QAASSAGGHVGSIGWQAPEVIADRVSLE------GGQ----GPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLVP 951 +A SS GS+GWQAPEV+A R+ LE GG+ G + A SS S P P S RRTQAVD+FSLGC+F+ +VPG+HPFG+WYERE NI++ K LS L P+A L+ M +P RP+A V HP R A + Q+ S L + VEAGA VVG +WD RLDA L D RYRKYD +SVRD LR++RNKRHHFHELPE V+ +++PLPGG RY + FP+LLMHC V LLT +++F+ Y+ P Sbjct: 550 EAQSSVPLGPGSVGWQAPEVLAARLGLEDTGAVVGGREEEVGAGNGHRLAGSSSSFP---------------APPSCSGRRTQAVDVFSLGCVFYTVLVPGAHPFGEWYERERNILEGKRD-LSGLAESPEARHLLEAMLFPDPARRPTARMVLHHPFFWAEDRRLAFLVDFSDRVEQEPADSLLALAVEAGAAEVVGSAWDARLDAGLLVDVNRYRKYDTASVRDCLRILRNKRHHFHELPEAVQRVLAPLPGGLYRYWQRHFPRLLMHCHGVCTRLLTRDKLFQTYMGP 824
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A7S3HDB2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDB2_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.000e-52 Identity = 98/209 (46.89%), Postives = 135/209 (64.59%), Query Frame = 1 Query: 316 RRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEY 942 +RT VD+FSLGC+F+ I G HPFGQW+EREANI K + L+ + H P A DL++ M A +P +RP++ EVC HP S+ + + SP+++ VEAGA +V+G WD RLD L ED G++RKYD +SVRDLLRV+RNKRHHFHEL +K + +P GF+ Y + RFPQL++HC V L+ E +F+ + Sbjct: 1439 KRTLTVDVFSLGCVFYFTITQGEHPFGQWFEREANIAAGKMS-LASVQHDPLAVDLLTWMLAADPLMRPTSSEVCGHPFFWTAASKLHFLVEFSDRMEHEPADSPMVLAVEAGALTVLGSRWDRRLDVLLLEDLGKFRKYDTTSVRDLLRVMRNKRHHFHELSLPLKEAIGSIPDGFMNYFDVRFPQLVLHCAYVAHRYLSGESLFRPW 1646
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A7S4J014_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J014_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.220e-49 Identity = 118/305 (38.69%), Postives = 169/305 (55.41%), Query Frame = 1 Query: 100 SNAQAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPV----------LGLLGSRRAPPLAVPGGGVQDAVQSPL-----LVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVT-GALLTDERIFKEYLVPFRRPQ 966 ++A+ + G GS+GWQAPEV+A R++ E SS + G+ + G S + + SSR +++VDIFSLGCIF+ I+PGSHPFG+WYEREANI++ K + + DA DLV+ M R+P RP+A +VC+HP+ L L R P V A P ++VE A VVG +WD +LD +L + R+R YD +SVRD LR++RNK HH+ ELP+ VK + P G + Y E +FP L+MHC V +L +D+ +Y +P + Q Sbjct: 1059 ASAEGSQLVGVGPGSVGWQAPEVMAQRLNPE------------SSSTMVRGTSTVGSDSMVEASPMDNTLSSRTSRSVDIFSLGCIFYCTIIPGSHPFGEWYEREANIMKNKPSTEALKNVSADASDLVNSMINRDPKSRPTATQVCEHPLFWSTSRRLAFLCELSDRLEADSVAPQDNVDGANSRPRNTCIDSLIVECNAVEVVGTAWDKKLDPDLLSNVSRFRTYDTASVRDCLRLIRNKYHHYDELPQEVKRRVGSNPDGLVAYFESKFPSLVMHCYSVCRNSLSSDDPFVVKYGIPVQNYQ 1351
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A1Z5JJ54_FISSO (Non-specific serine/threonine protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ54_FISSO) HSP 1 Score: 182 bits (461), Expect = 3.830e-47 Identity = 117/284 (41.20%), Postives = 154/284 (54.23%), Query Frame = 1 Query: 103 NAQAASSAGGHVGSIGWQAPEVIADR------VSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVP-DAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQ---DAVQSPL--LVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLT 918 N + AS A GS+GWQAPEV+A R V EG P SA G++ + + G R +++VD+FSLGCIF+ + PGSHPFG+WYEREANI+ + L L + DA+DLV+ M R P LRP+A +VC+HP RR L ++ D + L+ VE GA VVG SWD L+ EL + R+R YD SSVRDLLR++RNK HHF E+ + +K + G L Y E RFP+LL+HC LT Sbjct: 779 NGEKASFAEAGPGSVGWQAPEVMARRIPSDGSVRSEGSLNPESASGSSPADNCLSG---------------------RTSRSVDVFSLGCIFYSTLKPGSHPFGEWYEREANIMHNRPQ-LDALKDISLDAYDLVASMLQRNPLLRPTASQVCEHPFF-WSAERRLAFLCEFSDRLEMDYDVTSQTMTRLLAVEQGAAQVVGTSWDNGLEPELLSNVQRFRTYDPSSVRDLLRLMRNKHHHFDEMSDNLKNTLKSKTDGLLEYFEQRFPRLLIHCYNFCREYLT 1039
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: B8CA78_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA78_THAPS) HSP 1 Score: 160 bits (404), Expect = 1.970e-43 Identity = 90/202 (44.55%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 316 RRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHV-PDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRR------APPLAVPGGGVQDAVQSPL---LVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHC 891 R +++VDIFSLGCIF+ I+PGSHPFG+WYEREANI++ + +L V PDA DL+ M R+ RP+A EVC+HP R + + + DA P + +E GA + G SW+ RLD EL E + R YD SSVRD LR++RNK HH+ ELP ++K + G RY+ RFP+LLMHC Sbjct: 48 RTSRSVDIFSLGCIFYCTILPGSHPFGEWYEREANIMKN-TPNKEDLEFVSPDASDLILSMIHRDAKCRPTAEEVCEHPFFWRFAKRLKFLCELSDRIELCDTVPDDAENRPPPLNIFAIEKGAVEIFGTSWEKRLDPELMEASVSRRTYDPSSVRDCLRMIRNKHHHYDELPAKLKSRIGSNTDGLSRYISRRFPRLLMHC 248
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A448Z9E2_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9E2_9STRA) HSP 1 Score: 170 bits (430), Expect = 4.960e-43 Identity = 111/285 (38.95%), Postives = 151/285 (52.98%), Query Frame = 1 Query: 103 NAQAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVP-DAHDLVSLMTAREPDLRPSAGEVCKHPV----------LGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDE 924 N S G G++GWQAPEV+A R++ +D+S S S G S G S R +++VDIFSLGCIF+ ++PGSHPFG+W+EREANI+ + L LT + +A+ L+ M R P LRP+A EVC+HP L R PG + S +E GA VVG SW+ +LD+ L ++ ++R YD+S VRDLLR++RNK HHF ELPE + +P +Y FP L+MHC G LTD+ Sbjct: 835 NKSGVHSIGVGPGTVGWQAPEVMAMRLT-------------SDTSARSTDSASNIGESKEGQ-GNDILPSIRTSRSVDIFSLGCIFYSLLIPGSHPFGEWFEREANIMHNRPN-LKPLTSISSEAYRLIRSMLDRNPRLRPTAKEVCEHPFFWNAEKKLTFLCDFSDRLETDTIAPGSS--NVFGS---FAIERGALEVVGTSWEEKLDSSLVDNVQKFRTYDYSCVRDLLRLIRNKHHHFEELPEAFRLNEAPNQNALCKYFTKIFPALIMHCYTFCGQNLTDD 1099
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A453PZ12_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PZ12_AEGTS) HSP 1 Score: 158 bits (400), Expect = 2.280e-42 Identity = 87/215 (40.47%), Postives = 122/215 (56.74%), Query Frame = 1 Query: 319 RTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPV-----LGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLV 948 +T+A+D+FSLGC+ +CI G HPFG++YER+ NII L + H+P+A L+SL+ +PD RP+A HP+ L LL R ++ ++ LL +E+ G W +LD L D GRYRKY+F S RDLLR++RNK H+ ELP +K L+ LP GF RY RFP+LL+ KV DE F++Y + Sbjct: 78 QTRAMDLFSLGCLIFYCITKGKHPFGEYYERDINIINGHFD-LFVVDHIPEAVHLISLLLQPKPDERPTAMYAINHPLFWSPELRLLFLRDT------SDRIEKTTETDLLNALESIGLQAFGGKWREKLDDGLVADVGRYRKYNFESTRDLLRLIRNKSGHYRELPADLKELLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYFI 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8373.17375.1 >prot_L-elsbetiae_contig8373.17375.1 ID=prot_L-elsbetiae_contig8373.17375.1|Name=mRNA_L-elsbetiae_contig8373.17375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp MSSYGRMPGGRDQGQGGGGGGGDALARARASNAQAASSAGGHVGSIGWQAback to top mRNA from alignment at L-elsbetiae_contig8373:5567..8691- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8373.17375.1 ID=mRNA_L-elsbetiae_contig8373.17375.1|Name=mRNA_L-elsbetiae_contig8373.17375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3125bp|location=Sequence derived from alignment at L-elsbetiae_contig8373:5567..8691- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8373:5567..8691- >mRNA_L-elsbetiae_contig8373.17375.1 ID=mRNA_L-elsbetiae_contig8373.17375.1|Name=mRNA_L-elsbetiae_contig8373.17375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2166bp|location=Sequence derived from alignment at L-elsbetiae_contig8373:5567..8691- (Laminarionema elsbetiae ELsaHSoW15)back to top |