mRNA_L-elsbetiae_contig8373.17375.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8373.17375.1
Unique NamemRNA_L-elsbetiae_contig8373.17375.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A6H5KJS5_9PHAE (Non-specific serine/threonine protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJS5_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 6.980e-153
Identity = 272/340 (80.00%), Postives = 288/340 (84.71%), Query Frame = 1
Query:    1 SFGMSSYGRMPGGRDQGXXXXXXXXXXXXXXXXSNAQAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSA-GGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLVPFRRPQPPATNA----TGTTSSG 1005
            SFGMSSYGR PGGRD G   XXXXXXXXXXXXX     +SSAGGHVGSIGWQAPEVIADRVSLEGGQGP +A GG A+SSLS   SGSG  ASSWAMAGGPS SSSRRTQAVD+FSLGCIFHHCIVPGSHPFGQWYEREANIIQ+KA+ ++EL HVPDAHDLVSLMTAREPDLRPSAGEVCKHP       R +  L       QDAVQSPLLVMVEAGA SVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERV+ +MSPLPGGFLRYVE RFPQLLMHC KVTG+LLT+ERIF++YLV FRRPQPPA       +GTT  G
Sbjct:  972 SFGMSSYGRAPGGRDHGQGGXXXXXXXXXXXXXXXX--SSSAGGHVGSIGWQAPEVIADRVSLEGGQGPLTAMGGGAESSLSTSRSGSGASASSWAMAGGPSLSSSRRTQAVDVFSLGCIFHHCIVPGSHPFGQWYEREANIIQDKASRITELEHVPDAHDLVSLMTAREPDLRPSAGEVCKHPFFWNEEKRLSFLLEFSDRLEQDAVQSPLLVMVEAGAHSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVQAMMSPLPGGFLRYVEERFPQLLMHCAKVTGSLLTEERIFRDYLVHFRRPQPPAAAXXAAPSGTTQPG 1309          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: W7U7T2_9STRA (Serine threonine protein kinase endoribonuclease ire1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7T2_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.310e-65
Identity = 135/281 (48.04%), Postives = 176/281 (62.63%), Query Frame = 1
Query:  109 QAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLVP 951
            +A SS     GS+GWQAPEV+A R+ LE     + AGG  +   +  G G  G +SS+     P  +S RRTQAVD+FSLGC+F+  +VPG+HPFG+WYERE NI++ K   LS L   P+A  L+  M + +P  RP+A  V  HP       R A  +       Q+   S L + VEAGA  VVG +WD RLDA L  D  RYRKYD +SVRD LR++RNKRHHFHELPE V+ +++PLPGG  RY +  FP+LLMHC  V   LLT +++F+ Y+ P
Sbjct:  396 EAQSSVPLGPGSVGWQAPEVLAARLGLE--DTGAVAGGREEEVGAGNGHGLAGSSSSFPA---PPSASGRRTQAVDVFSLGCVFYTVLVPGAHPFGEWYERERNILEGKRD-LSGLAESPEARHLLEAMLSPDPARRPTARMVLHHPFFWAEDRRLAFLVDFSDRVEQEPADSLLALAVEAGAAEVVGSAWDARLDAGLLVDVNRYRKYDTASVRDCLRILRNKRHHFHELPEAVQRVLAPLPGGLYRYWQRHFPRLLMHCHGVCTRLLTRDKLFQTYMGP 670          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A836CAG8_9STRA (Ribonuclease 2-5A-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG8_9STRA)

HSP 1 Score: 214 bits (545), Expect = 3.410e-64
Identity = 106/196 (54.08%), Postives = 130/196 (66.33%), Query Frame = 1
Query:  316 RRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTH-VPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGV---QDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHC 891
            RR QA D+F+LGCIF HC+ P +HPFG+W+EREAN+++  A  L  +   +PDAHDLV  M   +PD RPSA +VC+HP     G  R     V        +D   S LL+ VE  A  VVGR+WD R+DA L EDAGRYR YD +S RD LR+VRNKRHHFHELP   + L++PLP G L YVE  FP+LLMHC
Sbjct:   75 RRAQAADVFALGCIFFHCLAPAAHPFGEWWEREANVLRGHAPQLPRIAAPLPDAHDLVRRMVRADPDARPSAADVCRHPFF--WGDERRLAFLVDFSDRLEREDGASSALLLCVERDAARVVGRAWDRRVDAALLEDAGRYRSYDRASARDFLRLVRNKRHHFHELPPAARALLAPLPSGLLHYVESLFPRLLMHC 268          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A4D9CQF7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQF7_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.700e-62
Identity = 135/291 (46.39%), Postives = 171/291 (58.76%), Query Frame = 1
Query:  109 QAASSAGGHVGSIGWQAPEVIADRVSLE------GGQ----GPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLVP 951
            +A SS     GS+GWQAPEV+A R+ LE      GG+    G  +    A SS S P                P   S RRTQAVD+FSLGC+F+  +VPG+HPFG+WYERE NI++ K   LS L   P+A  L+  M   +P  RP+A  V  HP       R A  +       Q+   S L + VEAGA  VVG +WD RLDA L  D  RYRKYD +SVRD LR++RNKRHHFHELPE V+ +++PLPGG  RY +  FP+LLMHC  V   LLT +++F+ Y+ P
Sbjct:  550 EAQSSVPLGPGSVGWQAPEVLAARLGLEDTGAVVGGREEEVGAGNGHRLAGSSSSFP---------------APPSCSGRRTQAVDVFSLGCVFYTVLVPGAHPFGEWYERERNILEGKRD-LSGLAESPEARHLLEAMLFPDPARRPTARMVLHHPFFWAEDRRLAFLVDFSDRVEQEPADSLLALAVEAGAAEVVGSAWDARLDAGLLVDVNRYRKYDTASVRDCLRILRNKRHHFHELPEAVQRVLAPLPGGLYRYWQRHFPRLLMHCHGVCTRLLTRDKLFQTYMGP 824          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A7S3HDB2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDB2_9STRA)

HSP 1 Score: 196 bits (497), Expect = 7.000e-52
Identity = 98/209 (46.89%), Postives = 135/209 (64.59%), Query Frame = 1
Query:  316 RRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEY 942
            +RT  VD+FSLGC+F+  I  G HPFGQW+EREANI   K + L+ + H P A DL++ M A +P +RP++ EVC HP      S+    +        +   SP+++ VEAGA +V+G  WD RLD  L ED G++RKYD +SVRDLLRV+RNKRHHFHEL   +K  +  +P GF+ Y + RFPQL++HC  V    L+ E +F+ +
Sbjct: 1439 KRTLTVDVFSLGCVFYFTITQGEHPFGQWFEREANIAAGKMS-LASVQHDPLAVDLLTWMLAADPLMRPTSSEVCGHPFFWTAASKLHFLVEFSDRMEHEPADSPMVLAVEAGALTVLGSRWDRRLDVLLLEDLGKFRKYDTTSVRDLLRVMRNKRHHFHELSLPLKEAIGSIPDGFMNYFDVRFPQLVLHCAYVAHRYLSGESLFRPW 1646          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A7S4J014_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J014_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.220e-49
Identity = 118/305 (38.69%), Postives = 169/305 (55.41%), Query Frame = 1
Query:  100 SNAQAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPV----------LGLLGSRRAPPLAVPGGGVQDAVQSPL-----LVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVT-GALLTDERIFKEYLVPFRRPQ 966
            ++A+ +   G   GS+GWQAPEV+A R++ E             SS  + G+ + G  S    +   +  SSR +++VDIFSLGCIF+  I+PGSHPFG+WYEREANI++ K +  +      DA DLV+ M  R+P  RP+A +VC+HP+          L  L  R       P   V  A   P       ++VE  A  VVG +WD +LD +L  +  R+R YD +SVRD LR++RNK HH+ ELP+ VK  +   P G + Y E +FP L+MHC  V   +L +D+    +Y +P +  Q
Sbjct: 1059 ASAEGSQLVGVGPGSVGWQAPEVMAQRLNPE------------SSSTMVRGTSTVGSDSMVEASPMDNTLSSRTSRSVDIFSLGCIFYCTIIPGSHPFGEWYEREANIMKNKPSTEALKNVSADASDLVNSMINRDPKSRPTATQVCEHPLFWSTSRRLAFLCELSDRLEADSVAPQDNVDGANSRPRNTCIDSLIVECNAVEVVGTAWDKKLDPDLLSNVSRFRTYDTASVRDCLRLIRNKYHHYDELPQEVKRRVGSNPDGLVAYFESKFPSLVMHCYSVCRNSLSSDDPFVVKYGIPVQNYQ 1351          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A1Z5JJ54_FISSO (Non-specific serine/threonine protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ54_FISSO)

HSP 1 Score: 182 bits (461), Expect = 3.830e-47
Identity = 117/284 (41.20%), Postives = 154/284 (54.23%), Query Frame = 1
Query:  103 NAQAASSAGGHVGSIGWQAPEVIADR------VSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVP-DAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGVQ---DAVQSPL--LVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLT 918
            N + AS A    GS+GWQAPEV+A R      V  EG   P SA G++ +   + G                     R +++VD+FSLGCIF+  + PGSHPFG+WYEREANI+  +   L  L  +  DA+DLV+ M  R P LRP+A +VC+HP       RR   L      ++   D     +  L+ VE GA  VVG SWD  L+ EL  +  R+R YD SSVRDLLR++RNK HHF E+ + +K  +     G L Y E RFP+LL+HC       LT
Sbjct:  779 NGEKASFAEAGPGSVGWQAPEVMARRIPSDGSVRSEGSLNPESASGSSPADNCLSG---------------------RTSRSVDVFSLGCIFYSTLKPGSHPFGEWYEREANIMHNRPQ-LDALKDISLDAYDLVASMLQRNPLLRPTASQVCEHPFF-WSAERRLAFLCEFSDRLEMDYDVTSQTMTRLLAVEQGAAQVVGTSWDNGLEPELLSNVQRFRTYDPSSVRDLLRLMRNKHHHFDEMSDNLKNTLKSKTDGLLEYFEQRFPRLLIHCYNFCREYLT 1039          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: B8CA78_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA78_THAPS)

HSP 1 Score: 160 bits (404), Expect = 1.970e-43
Identity = 90/202 (44.55%), Postives = 120/202 (59.41%), Query Frame = 1
Query:  316 RRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHV-PDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRR------APPLAVPGGGVQDAVQSPL---LVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHC 891
            R +++VDIFSLGCIF+  I+PGSHPFG+WYEREANI++    +  +L  V PDA DL+  M  R+   RP+A EVC+HP       R       +  + +      DA   P    +  +E GA  + G SW+ RLD EL E +   R YD SSVRD LR++RNK HH+ ELP ++K  +     G  RY+  RFP+LLMHC
Sbjct:   48 RTSRSVDIFSLGCIFYCTILPGSHPFGEWYEREANIMKN-TPNKEDLEFVSPDASDLILSMIHRDAKCRPTAEEVCEHPFFWRFAKRLKFLCELSDRIELCDTVPDDAENRPPPLNIFAIEKGAVEIFGTSWEKRLDPELMEASVSRRTYDPSSVRDCLRMIRNKHHHYDELPAKLKSRIGSNTDGLSRYISRRFPRLLMHC 248          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A448Z9E2_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9E2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 4.960e-43
Identity = 111/285 (38.95%), Postives = 151/285 (52.98%), Query Frame = 1
Query:  103 NAQAASSAGGHVGSIGWQAPEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFSSSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVP-DAHDLVSLMTAREPDLRPSAGEVCKHPV----------LGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDE 924
            N     S G   G++GWQAPEV+A R++             +D+S     S S  G S     G     S R +++VDIFSLGCIF+  ++PGSHPFG+W+EREANI+  +   L  LT +  +A+ L+  M  R P LRP+A EVC+HP           L     R       PG    +   S     +E GA  VVG SW+ +LD+ L ++  ++R YD+S VRDLLR++RNK HHF ELPE  +   +P      +Y    FP L+MHC    G  LTD+
Sbjct:  835 NKSGVHSIGVGPGTVGWQAPEVMAMRLT-------------SDTSARSTDSASNIGESKEGQ-GNDILPSIRTSRSVDIFSLGCIFYSLLIPGSHPFGEWFEREANIMHNRPN-LKPLTSISSEAYRLIRSMLDRNPRLRPTAKEVCEHPFFWNAEKKLTFLCDFSDRLETDTIAPGSS--NVFGS---FAIERGALEVVGTSWEEKLDSSLVDNVQKFRTYDYSCVRDLLRLIRNKHHHFEELPEAFRLNEAPNQNALCKYFTKIFPALIMHCYTFCGQNLTDD 1099          
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Match: A0A453PZ12_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PZ12_AEGTS)

HSP 1 Score: 158 bits (400), Expect = 2.280e-42
Identity = 87/215 (40.47%), Postives = 122/215 (56.74%), Query Frame = 1
Query:  319 RTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELTHVPDAHDLVSLMTAREPDLRPSAGEVCKHPV-----LGLLGSRRAPPLAVPGGGVQDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDLLRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGALLTDERIFKEYLV 948
            +T+A+D+FSLGC+  +CI  G HPFG++YER+ NII      L  + H+P+A  L+SL+   +PD RP+A     HP+     L LL  R           ++   ++ LL  +E+      G  W  +LD  L  D GRYRKY+F S RDLLR++RNK  H+ ELP  +K L+  LP GF RY   RFP+LL+   KV      DE  F++Y +
Sbjct:   78 QTRAMDLFSLGCLIFYCITKGKHPFGEYYERDINIINGHFD-LFVVDHIPEAVHLISLLLQPKPDERPTAMYAINHPLFWSPELRLLFLRDT------SDRIEKTTETDLLNALESIGLQAFGGKWREKLDDGLVADVGRYRKYNFESTRDLLRLIRNKSGHYRELPADLKELLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYFI 285          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8373.17375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJS5_9PHAE6.980e-15380.00Non-specific serine/threonine protein kinase n=2 T... [more]
W7U7T2_9STRA5.310e-6548.04Serine threonine protein kinase endoribonuclease i... [more]
A0A836CAG8_9STRA3.410e-6454.08Ribonuclease 2-5A-domain-containing protein (Fragm... [more]
A0A4D9CQF7_9STRA1.700e-6246.39Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3HDB2_9STRA7.000e-5246.89Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4J014_9STRA1.220e-4938.69Non-specific serine/threonine protein kinase n=1 T... [more]
A0A1Z5JJ54_FISSO3.830e-4741.20Non-specific serine/threonine protein kinase n=2 T... [more]
B8CA78_THAPS1.970e-4344.55Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A448Z9E2_9STRA4.960e-4338.95Non-specific serine/threonine protein kinase n=1 T... [more]
A0A453PZ12_AEGTS2.280e-4240.47Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8373contigL-elsbetiae_contig8373:5567..8691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.3
Seed ortholog evalue8.1e-74
Seed eggNOG ortholog2880.D7G2H1
Preferred nameIRE1
KEGG koko:K08852
KEGG Pathwayko04140,ko04141,ko04210,ko04932,ko05010,map04140,map04141,map04210,map04932,map05010
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ribonuclease activity
EggNOG OGsCOG0515@1,KOG1027@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons5
Model size1093
Cds size1083
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8373.17375.1prot_L-elsbetiae_contig8373.17375.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8373 5567..8682 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816919.4000769-CDS-L-elsbetiae_contig8373:5566..58071622816919.4000769-CDS-L-elsbetiae_contig8373:5566..5807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 5567..5807 -
1691683912.369699-CDS-L-elsbetiae_contig8373:5566..58071691683912.369699-CDS-L-elsbetiae_contig8373:5566..5807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 5567..5807 -
1622816919.412454-CDS-L-elsbetiae_contig8373:6282..65211622816919.412454-CDS-L-elsbetiae_contig8373:6282..6521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 6283..6521 -
1691683912.3918304-CDS-L-elsbetiae_contig8373:6282..65211691683912.3918304-CDS-L-elsbetiae_contig8373:6282..6521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 6283..6521 -
1622816919.4225144-CDS-L-elsbetiae_contig8373:7077..72491622816919.4225144-CDS-L-elsbetiae_contig8373:7077..7249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 7078..7249 -
1691683912.4058466-CDS-L-elsbetiae_contig8373:7077..72491691683912.4058466-CDS-L-elsbetiae_contig8373:7077..7249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 7078..7249 -
1622816919.4323702-CDS-L-elsbetiae_contig8373:7684..78911622816919.4323702-CDS-L-elsbetiae_contig8373:7684..7891Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 7685..7891 -
1691683912.416676-CDS-L-elsbetiae_contig8373:7684..78911691683912.416676-CDS-L-elsbetiae_contig8373:7684..7891Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 7685..7891 -
1622816919.4467094-CDS-L-elsbetiae_contig8373:8458..86821622816919.4467094-CDS-L-elsbetiae_contig8373:8458..8682Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 8459..8682 -
1691683912.4266183-CDS-L-elsbetiae_contig8373:8458..86821691683912.4266183-CDS-L-elsbetiae_contig8373:8458..8682Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8373 8459..8682 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816919.4600825-UTR-L-elsbetiae_contig8373:8682..86911622816919.4600825-UTR-L-elsbetiae_contig8373:8682..8691Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8373 8683..8691 -
1691683912.4457226-UTR-L-elsbetiae_contig8373:8682..86911691683912.4457226-UTR-L-elsbetiae_contig8373:8682..8691Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8373 8683..8691 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8373.17375.1

>prot_L-elsbetiae_contig8373.17375.1 ID=prot_L-elsbetiae_contig8373.17375.1|Name=mRNA_L-elsbetiae_contig8373.17375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp
MSSYGRMPGGRDQGQGGGGGGGDALARARASNAQAASSAGGHVGSIGWQA
PEVIADRVSLEGGQGPSSAGGAADSSLSMPGSGSGGGASSWAMAGGPSFS
SSRRTQAVDIFSLGCIFHHCIVPGSHPFGQWYEREANIIQEKATHLSELT
HVPDAHDLVSLMTAREPDLRPSAGEVCKHPVLGLLGSRRAPPLAVPGGGV
QDAVQSPLLVMVEAGADSVVGRSWDVRLDAELTEDAGRYRKYDFSSVRDL
LRVVRNKRHHFHELPERVKGLMSPLPGGFLRYVEGRFPQLLMHCTKVTGA
LLTDERIFKEYLVPFRRPQPPATNATGTTSSGAPAAQPGTPGAAATATAA
AATATAAERSV
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mRNA from alignment at L-elsbetiae_contig8373:5567..8691-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8373.17375.1 ID=mRNA_L-elsbetiae_contig8373.17375.1|Name=mRNA_L-elsbetiae_contig8373.17375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3125bp|location=Sequence derived from alignment at L-elsbetiae_contig8373:5567..8691- (Laminarionema elsbetiae ELsaHSoW15)
AGCTTCGGCATGTCGTCGTACGGCCGCATGCCGGGGGGGAGAGACCAAGG GCAGGGTGGCGGCGGTGGCGGCGGCGACGCCCTTGCACGCGCTAGAGCCT CGAACGCCCAGGCCGCTTCTTCCGCCGGGGGTCACGTTGGCAGCATCGGC TGGCAGGCGCCCGAAGTAATCGCAGACCGCGTTAGCCTGGAGGGGGGGCA GGGGCCGTCCTCCGCAGGGGGCGCCGCAGATAGGTGTGTGTGTGTGTGTG GCGACTGTGGGCAGGGAGGGTTGGCGTGCGGTGCATGAAGACTGCGTGCT TAAGCTGCGAAGAGGGCGAATAGGGAGGGGATAGGGGCTACGTAGGACTG ACGTCAAGCGAAAGGCGGTATGTACTGATATCTAGATATGATGGTTTGAA GCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTGTTTTTTTTTTT CCCGTTTTCGCGGCGCCCCTTCCCCCCCCCTTCTTTTCTCCCTCCCTCCC CCCCCTCCCNNNNNNNNNNGGGCTACCCCTCTCGGGCCCCCCTCCCCCGC CCTCCCCCACCCCCCCCTTTTTCTCTTCGCTCGCCCCCCCCCCCCCCCCC CCTCCCCCCACGAGCTTTTCTTGGCTTCATTCACATGGCTGTGTCGGCCC CTCTTTTCACACCGTTTTTATCCCCATCCGTCGCCCTCTGACCCCCGCGC TCCCACGCTCCCCACGTGCCCTCGTCCCGCCGTGCGACCGGCCCTCTTGT TGCTGCTGCCTGCCGCGGGAACGCTGTTGTGTTGCTGCACATGCATGTAG CTCCTTGTCGATGCCCGGATCCGGGTCTGGCGGTGGCGCGTCTTCGTGGG CGATGGCCGGCGGCCCCAGCTTCTCCTCGTCCCGCCGCACGCAGGCGGTC GACATCTTCTCCCTCGGGTGCATCTTCCACCACTGCATCGTGCCCGGCTC CCACCCGTTCGGGCAGTGGTACGAGCGAGAGGCCAACATCATCCAGGAGA AGGCCACGTGAGGAGGGAGGGAGGGAGGGAGGGAGGCGAAAGCGTTTTCT TTGAGCATTGTGTCAAGTGTATAGTTCTTTGCGCTGGCTGTGTCTTAGCG CGCAGAAGCAGGGGTGCAACCCGACAGTCGGTCAGCCGTCGCAAGCCGTA CCCGAAAGCCCCGCCCGCCCTATCTACGGAGCTCACGAGTGGGGTGGTTG GGTATGTGTGGCTCATTTTTGTTGCCGTCGGATGTAGCGTTGCTTTGGGG CGCTTTTTTTTAAATGTTTTGTGTTTCTGCGATCGTCCTCCAAAGGCACC CAGAGCGGGGTGCTCTATTGCAGCTCAAGCCCCCCCCCTCGAAAGTCGTC CCTGGATTAATGAATTAACCCCGCTTTCGTTCGCACGGCGTATTTTTGCT CGTCTGCCATCCTTCTTCTTCGTCTACCAACACGCCCGACAGCCATCTCT CGGAGCTGACCCACGTGCCGGACGCGCACGACTTGGTGTCTCTCATGACC GCGAGAGAGCCCGACCTCAGGCCGTCCGCGGGGGAGGTCTGCAAGCACCC GGTTTTGGGGCTCCTAGGGAGCCGCCGGGCGCCCCCCCTGGCGGTCCCGG GCGGGGGCGTGCAGGTTTGTTGCGTGTTTTTTTTTTTTTTCTTCTTTCTT TCTTTCTCACATTTATTTTCAGTGCTCGATGGGCTCCCTGTCACGAGGAC ATTATACCAGAGTACTGGATCGTGGTTGCACAGAAGGGTTCCTTTCCCCA AGGCCTCCACTCCCCCTGTCCGCGGTGCTTGCCTACTATTTTTATCGCGA GAGGGGTTCAGCCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAGTTTGT ACAGCAGCTGTAAGCAGGTAGTAGTAGTGCCTGCTTGGTCATCGGTTTTG TCGTGCGCGACGTTGTTTTTTTTGCCTGAAAAGGGTTAGGGTTATTATTT ATTCACTCCTGTTTTTTTGCCGTTCCAACCCTTTGTCTCTTAGCGTTTTG TTGGACCAAGGGAATTTACGGCGTTCACCTCAACCCCCCGCCCGCCCGCG CCGTTTGCTCTCAATTTTCGATTTCGTTCTTTCACGCTCCCTCGCCCTCC CCTCTGATTTCTAAACGGCTACCCGCCGCCGCCGCCGCCGCCCTCCTTCC GTACGGTAACATGAATTCAGGACGCCGTCCAGTCGCCCCTTCTTGTGATG GTCGAAGCGGGGGCCGACTCGGTGGTCGGGCGGTCGTGGGACGTGCGCCT CGACGCGGAGCTGACGGAAGACGCCGGGCGCTACCGCAAGTACGACTTCA GCAGCGTTCGCGACCTGCTGCGCGTGGTCCGCAACAAGCGGCACCACTTC CACGAGCTGCCGGAGCGGGTGAAGGGGCTCATGAGCCCGCTACCCGGGGG CTTCCTCAGGTGTGTGTGTGTGTGTGTGTGTGCTTGGAAAGAGGTACAAT ACATAAGAAGCATGCGCTTTTGCGTGCGGCCTTCTGTTTGTTGTAGCGTT TCAGGGTGTGAAGGATGGGCGGGGGCCCGACGTTTGGGCTTGTCTTCTTT GCGGCGTGTTGAGACCACCGACACGCGTACGTACAAAGGTACACATCACA ATACATTTGCGCAGAAAAAGGGCGGCTTTTGGTCGTTGTGGTCTCGGTTG GGAGGAGTTTCGTGGCCAGTGGGTCTGTGCCTGTGCCGTGCCGTATGTCT CTAAGGTATGCTCGAGGCTAGGAGGCCGCCCTGTTGTCATCTCATCCGTC GCGCGAGAGGCCGAGGCCGTTTTGCAGGCTTGTCGTTAAGCCGGGTCCTC TGTCGGTGTGTGTCGCCACGTCTACCAGGGCATTATTGAGTCTTTTGTTT TCCCCCGTTTTTTGTTTTTCCTTTGTTTCACTAGATACGTGGAGGGTCGC TTCCCGCAGCTGTTGATGCACTGCACCAAGGTCACGGGCGCACTTCTCAC AGACGAGCGTATCTTCAAGGAGTACCTCGTGCCCTTCCGCCGCCCTCAGC CGCCCGCCACCAACGCCACCGGCACCACCTCCTCCGGCGCCCCCGCGGCC CAACCCGGTACCCCGGGTGCTGCTGCTACCGCGACGGCTGCTGCTGCTAC CGCGACGGCGGCCGAGAGATCGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8373:5567..8691-

>mRNA_L-elsbetiae_contig8373.17375.1 ID=mRNA_L-elsbetiae_contig8373.17375.1|Name=mRNA_L-elsbetiae_contig8373.17375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2166bp|location=Sequence derived from alignment at L-elsbetiae_contig8373:5567..8691- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTCGTACGGCCGCATGCCGGGGGGGAGAGACCAAGGGCAGGGTGG
CGGCGGTGGCGGCGGCGACGCCCTTGCACGCGCTAGAGCCTCGAACGCCC
AGGCCGCTTCTTCCGCCGGGGGTCACGTTGGCAGCATCGGCTGGCAGGCG
CCCGAAGTAATCGCAGACCGCGTTAGCCTGGAGGGGGGGCAGGGGCCGTC
CTCCGCAGGGGGCGCCGCAGATAGATGTCGTCGTACGGCCGCATGCCGGG
GGGGAGAGACCAAGGGCAGGGTGGCGGCGGTGGCGGCGGCGACGCCCTTG
CACGCGCTAGAGCCTCGAACGCCCAGGCCGCTTCTTCCGCCGGGGGTCAC
GTTGGCAGCATCGGCTGGCAGGCGCCCGAAGTAATCGCAGACCGCGTTAG
CCTGGAGGGGGGGCAGGGGCCGTCCTCCGCAGGGGGCGCCGCAGATAGCT
CCTTGTCGATGCCCGGATCCGGGTCTGGCGGTGGCGCGTCTTCGTGGGCG
ATGGCCGGCGGCCCCAGCTTCTCCTCGTCCCGCCGCACGCAGGCGGTCGA
CATCTTCTCCCTCGGGTGCATCTTCCACCACTGCATCGTGCCCGGCTCCC
ACCCGTTCGGGCAGTGGTACGAGCGAGAGGCCAACATCATCCAGGAGAAG
GCCACCTCCTTGTCGATGCCCGGATCCGGGTCTGGCGGTGGCGCGTCTTC
GTGGGCGATGGCCGGCGGCCCCAGCTTCTCCTCGTCCCGCCGCACGCAGG
CGGTCGACATCTTCTCCCTCGGGTGCATCTTCCACCACTGCATCGTGCCC
GGCTCCCACCCGTTCGGGCAGTGGTACGAGCGAGAGGCCAACATCATCCA
GGAGAAGGCCACCCATCTCTCGGAGCTGACCCACGTGCCGGACGCGCACG
ACTTGGTGTCTCTCATGACCGCGAGAGAGCCCGACCTCAGGCCGTCCGCG
GGGGAGGTCTGCAAGCACCCGGTTTTGGGGCTCCTAGGGAGCCGCCGGGC
GCCCCCCCTGGCGGTCCCGGGCGGGGGCGTGCAGCCATCTCTCGGAGCTG
ACCCACGTGCCGGACGCGCACGACTTGGTGTCTCTCATGACCGCGAGAGA
GCCCGACCTCAGGCCGTCCGCGGGGGAGGTCTGCAAGCACCCGGTTTTGG
GGCTCCTAGGGAGCCGCCGGGCGCCCCCCCTGGCGGTCCCGGGCGGGGGC
GTGCAGGACGCCGTCCAGTCGCCCCTTCTTGTGATGGTCGAAGCGGGGGC
CGACTCGGTGGTCGGGCGGTCGTGGGACGTGCGCCTCGACGCGGAGCTGA
CGGAAGACGCCGGGCGCTACCGCAAGTACGACTTCAGCAGCGTTCGCGAC
CTGCTGCGCGTGGTCCGCAACAAGCGGCACCACTTCCACGAGCTGCCGGA
GCGGGTGAAGGGGCTCATGAGCCCGCTACCCGGGGGCTTCCTCAGGACGC
CGTCCAGTCGCCCCTTCTTGTGATGGTCGAAGCGGGGGCCGACTCGGTGG
TCGGGCGGTCGTGGGACGTGCGCCTCGACGCGGAGCTGACGGAAGACGCC
GGGCGCTACCGCAAGTACGACTTCAGCAGCGTTCGCGACCTGCTGCGCGT
GGTCCGCAACAAGCGGCACCACTTCCACGAGCTGCCGGAGCGGGTGAAGG
GGCTCATGAGCCCGCTACCCGGGGGCTTCCTCAGATACGTGGAGGGTCGC
TTCCCGCAGCTGTTGATGCACTGCACCAAGGTCACGGGCGCACTTCTCAC
AGACGAGCGTATCTTCAAGGAGTACCTCGTGCCCTTCCGCCGCCCTCAGC
CGCCCGCCACCAACGCCACCGGCACCACCTCCTCCGGCGCCCCCGCGGCC
CAACCCGGTACCCCGGGTGCTGCTGCTACCGCGACGGCTGCTGCTGCTAC
CGCGACGGCGGCCGAGAGATCGGTGATACGTGGAGGGTCGCTTCCCGCAG
CTGTTGATGCACTGCACCAAGGTCACGGGCGCACTTCTCACAGACGAGCG
TATCTTCAAGGAGTACCTCGTGCCCTTCCGCCGCCCTCAGCCGCCCGCCA
CCAACGCCACCGGCACCACCTCCTCCGGCGCCCCCGCGGCCCAACCCGGT
ACCCCGGGTGCTGCTGCTACCGCGACGGCTGCTGCTGCTACCGCGACGGC
GGCCGAGAGATCGGTG
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