mRNA_L-elsbetiae_contig8352.17357.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A6H5KJT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT5_9PHAE) HSP 1 Score: 330 bits (845), Expect = 1.090e-111 Identity = 162/193 (83.94%), Postives = 175/193 (90.67%), Query Frame = 1 Query: 1 NEGRIKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYCTETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNRRLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTFRL 579 N RIKQGDL DPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEG+KRTVQR D KDNARLPEEHARRVGDRILAYCTE FG+TKLAPVV QG ++ ELR+GCD+IMN+LRLNFY LDYAVTAD +R++LTV+ATAPATIWGQQVLAQR+DRPANDFEAK + AYLRACG GATYST FSSLDA HTFRL Sbjct: 116 NFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILAYCTEAFGSTKLAPVVTQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVLTVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSSLDAVHTFRL 308
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: D8LI96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI96_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.120e-82 Identity = 131/193 (67.88%), Postives = 144/193 (74.61%), Query Frame = 1 Query: 1 NEGRIKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYCTETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNRRLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTFRL 579 N RIKQGDL DPDYFDFISFAQYASVAEAMRNGRDFFEEK AYCTE FG+TKLAPVVAQG ++ ELR+GCD+IMN+LRLNFY LDYAVTAD +R++LTV+ATAPATIWGQQVLAQR+DRPANDFEAK + AYLRACG GATYST FS+LDA HTFRL Sbjct: 76 NFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEK-----------------------------------AYCTEAFGSTKLAPVVAQGQTVAELREGCDRIMNLLRLNFYTLDYAVTADLDRKVLTVRATAPATIWGQQVLAQRRDRPANDFEAKVISAYLRACGLEGATYSTAFSNLDAVHTFRL 233
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A836CM91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM91_9STRA) HSP 1 Score: 196 bits (499), Expect = 5.950e-59 Identity = 109/193 (56.48%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 13 IKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYCTETFGATKLA-PVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNR---RLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTFRL 579 I QGDL DP+YFDFISFAQYA++A MR+ + F EKVGA+G+ +TVQR +L D+A LP EHARRVGDRI Y ETF + A P V+ L + G +++M+ RLNF+ +D V A + +LTV A APAT+W QQVLAQR+D P NDFEAKAV AYLRAC TY+TT+S LD THTFRL Sbjct: 142 ILQGDLTDPNYFDFISFAQYATIAAGMRSAQLLFTEKVGADGETQTVQRAPELADDALLPGEHARRVGDRIFTYIMETFASVPEALPQVSVKPPLSIIARGVERVMDKFRLNFFCVDAKVAASTGKDGSAVLTVTARAPATLWSQQVLAQRRDAPTNDFEAKAVAAYLRACQVPH-TYTTTYSGLDVTHTFRL 333
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A7S2V3L1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3L1_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.300e-35 Identity = 82/191 (42.93%), Postives = 113/191 (59.16%), Query Frame = 1 Query: 13 IKQGDLQDPDYFDFISFAQYASVAEAMRNGR-DFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYC-TETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNRRLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTFRL 579 + QGDL DP YFDFISFAQYA+++ M+N F EK GAEG+ +QR + DN LP HA+ VGDR+L Y TE + KLAP V + S+ L G Q + +++LN + LD+ V + + V+ PA++W QQVL +Q NDFEAK + AYLR CG Y T+F+ + H+F + Sbjct: 134 VTQGDLADPVYFDFISFAQYATLSRFMKNPPGQVFVEKRGAEGEDFVIQRPQEYADNKVLPIVHAQLVGDRMLEYLSTEKY--EKLAPKVPEKPSVETLLSGIVQAVGLMKLNSFMLDFQVKPVSPKEI-EVRLQGPASLWSQQVLRGQQTVLTNDFEAKLICAYLRKCGVK-PVYRTSFTKTEVVHSFSI 320
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: R1CRK3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CRK3_EMIHU) HSP 1 Score: 135 bits (341), Expect = 3.860e-35 Identity = 82/188 (43.62%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 13 IKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDL-KDNARLPEEHARRVGDRILAYCTETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNRRLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTF 573 +KQGD+ DP+YFDF+S+ QYA++A MR+GR FEE + A G V RD L +DNARLP + RVGD+IL E + LAP V S L +G + + N Y L + +P+ R + A APAT+W QQVL+ R D NDFEAKA+ AYLR C A+Y+T + + H F Sbjct: 174 VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLL--SARLEPSERGFQLSAIAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCAVD-ASYTTRYEGSEVVHIF 355
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: R1DSH8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DSH8_EMIHU) HSP 1 Score: 135 bits (341), Expect = 1.050e-34 Identity = 82/188 (43.62%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 13 IKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDL-KDNARLPEEHARRVGDRILAYCTETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNRRLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTF 573 +KQGD+ DP+YFDF+S+ QYA++A MR+GR FEE + A G V RD L +DNARLP + RVGD+IL E + LAP V S L +G + + N Y L + +P+ R + A APAT+W QQVL+ R D NDFEAKA+ AYLR C A+Y+T + + H F Sbjct: 229 VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVARDPALPRDNARLPALLSLRVGDKILDAIAERYPG--LAPTVELRPSRAALLEGVKALAQVFEYNNYLL--SARLEPSERGFQLSAIAPATVWSQQVLSLRGDL-VNDFEAKAIAAYLRRCAVD-ASYTTRYEGSEVVHIF 410
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A8J5X5N7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X5N7_DIALT) HSP 1 Score: 130 bits (326), Expect = 1.470e-33 Identity = 85/197 (43.15%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 4 EGRI-KQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDL-KDNARLPEEHARRVGDRILAYCTETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPNR---RLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATHTFRL 579 EG + KQGDLQDP YFDFISFAQY+++AE MRNGR + E VGAEG++ +R D+ +DNA LP EH RRVGD I ++ +E + +AP A E+ +++ + R+ + AV NR LT APAT+W Q+VL R NDFEA AV A +R G + T+FS LD H Sbjct: 91 EGLVPKQGDLQDPSYFDFISFAQYSTLAEEMRNGRLAYRELVGAEGEQVVRERPADVPRDNAALPAEHRRRVGDVIFSWASERYD---IAPARAPD----EIAARARELLEVFRIRGFVASTAVQLAQNRDGSATLTCAVGAPATLWSQRVLEGTALR--NDFEAMAVNALVRQAGATLLSQRTSFSPLDVRHAITF 278
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A7S2MPG0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MPG0_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.770e-30 Identity = 73/191 (38.22%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 13 IKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYCTETFGATKLAP--VVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVT----ADPNRRLLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGFGGATYSTTFSSLDATH 567 I QG+L DP YFDFIS+AQYA+++ M G F E+VG +G+++ V+RD + NA LP H++ VGD IL + E + P +A G S L +Q++ + LN + D+ V R+ + + + PAT W QQ L++R NDFE K V+AYL ACG ST F D H Sbjct: 180 IVQGELADPRYFDFISYAQYATISSCMNRGLFVFTEQVGVDGEEQVVRRDTTIT-NALLPAMHSKAVGDTILNWLLERYNKEGEQPRLPIAMGQSTDALVANINQLLGLFFLNNFLSDWTVRLVGGGQQGRQAVELVVSNPATRWSQQALSRRGSVIHNDFEVKTVIAYLNACGVVARQISTRFKGTDVIH 369
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A6U4J7M3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4J7M3_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.490e-30 Identity = 75/202 (37.13%), Postives = 107/202 (52.97%), Query Frame = 1 Query: 13 IKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYCTETFGATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTADPN--------RRLLTVKATAPATIWGQQVLAQRQDR----PANDFEAKAVLAYLRACGFGGATYSTTF-SSLDATHTFRL 579 + QGDL +PDYFD+ISF QYA + ++MR+GR F EK+GAEG++RTV+R L+DN LP EH RRVG +L++ E F S +L G +Q + + + Y + V + + R LT+ ++ T WGQ+ LA+ +R P NDFE K A+L+ G TTF D H+ L Sbjct: 95 MTQGDLANPDYFDYISFCQYAVIGDSMRSGRLEFIEKIGAEGEQRTVRRAEGLRDNNLLPREHERRVGALLLSHLIERFPGRFPLLEGINARSSADLCGGVEQALRCMAICGYGTQWTVLPEASIGSDDIVPRLRLTISGSSLPTAWGQKRLARDAERFPGLPVNDFEVKVARAWLQRQGVASRLLRTTFLRDADVIHSIEL 296
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Match: A0A2K1IX90_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IX90_PHYPA) HSP 1 Score: 112 bits (281), Expect = 4.020e-26 Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 10 RIKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTVQRDVDLKDNARLPEEHARRVGDRILAYCTETF-GATKLAPVVAQGLSLPELRDGCDQIMNILRLNFYQLDYAVTA---DPNRR--LLTVKATAPATIWGQQVLAQRQDRPANDFEAKAVLAYLRACGF 519 R+K GDL DP YFDFISF+Q+A+++ ++ G F+EK+G++G+ RTV+RD LKDNA LP + GD + + F G AP A L + DG +++ + Y L +V PN L VK AT WG + LA R+ NDF AV AYLRACGF Sbjct: 207 RVKYGDLTDPLYFDFISFSQFAAISNEIKTGELVFQEKIGSDGESRTVRRDERLKDNAALPAAFVNKAGDLLYGKLVDGFEGENFNAPPPASSDFLA-VTDGVKKLVQVFVDKGYALKASVEPVQFSPNSTGGKLRVKLEGSATQWGLRALASRRALLVNDFTGLAVGAYLRACGF 381 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8352.17357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8352.17357.1 >prot_L-elsbetiae_contig8352.17357.1 ID=prot_L-elsbetiae_contig8352.17357.1|Name=mRNA_L-elsbetiae_contig8352.17357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp NEGRIKQGDLQDPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGDKRTback to top mRNA from alignment at L-elsbetiae_contig8352:7118..8638- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8352.17357.1 ID=mRNA_L-elsbetiae_contig8352.17357.1|Name=mRNA_L-elsbetiae_contig8352.17357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1521bp|location=Sequence derived from alignment at L-elsbetiae_contig8352:7118..8638- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8352:7118..8638- >mRNA_L-elsbetiae_contig8352.17357.1 ID=mRNA_L-elsbetiae_contig8352.17357.1|Name=mRNA_L-elsbetiae_contig8352.17357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1164bp|location=Sequence derived from alignment at L-elsbetiae_contig8352:7118..8638- (Laminarionema elsbetiae ELsaHSoW15)back to top |