mRNA_L-elsbetiae_contig8351.17355.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8351.17355.1
Unique NamemRNA_L-elsbetiae_contig8351.17355.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A6H5KA77_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA77_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 1.600e-138
Identity = 206/288 (71.53%), Postives = 228/288 (79.17%), Query Frame = 1 
Query:    4 QLFPDVLIYWSFMYLVVIAALVARRWTKLGRFFHAPFRPFGGRLLQP---------RQNREDVFSRLGVGHGPSYSSSSPCSPRFGWKNGEAFLAMAFFALLLCEGLYWYLDHGWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVF-EDGDFWHDWPVAIPTDYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            +LFPDVLIYWSF YLV + ALVARRW +L RFFH PF+PFGGRL Q          R   +   + LG       S  S   P  G KNGE FLA AFFALLLCEGLYWYLDHGW  ++IDS TWQERFARTMGQLAN+TMGLMILPVLRNGVF+ VFGVGWE+MVAFHRRMSRVFLALVLVHMVFFWVV+ ++GDFWHDWP+AIPTDYHQDNWTIPLAT+TTW+MVI MF LSV+WVRR+HFEVFYY+           LWHAASAWYYI AS+ALWL+DRAIRFSK
Sbjct:  330 KLFPDVLIYWSFAYLVAVVALVARRWRRLERFFHGPFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGSSSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSFTWQERFARTMGQLANVTMGLMILPVLRNGVFQNVFGVGWETMVAFHRRMSRVFLALVLVHMVFFWVVYAQEGDFWHDWPIAIPTDYHQDNWTIPLATVTTWLMVITMFGLSVQWVRRKHFEVFYYSXXXXXXXXXXXLWHAASAWYYIAASIALWLVDRAIRFSK 617
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BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: D7FS88_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS88_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 5.840e-69
Identity = 105/132 (79.55%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:  445 VFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVF-EDGDFWHDWPVAIPTDYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            VFGVGWE+MVAFHRRMSRVFLALVLVHMVFFW V+ ++GDFWHDWP+AIPTDYHQDNWTIPLATLTTW MVI MF LSV+WVRR+HFEVFYY+           LWHAASAWYYI AS+ALWL+DRAIRFSK
Sbjct:    2 VFGVGWETMVAFHRRMSRVFLALVLVHMVFFWAVYAQEGDFWHDWPIAIPTDYHQDNWTIPLATLTTWFMVITMFGLSVQWVRRKHFEVFYYSXXXXXXXXXXXLWHAASAWYYIAASIALWLVDRAIRFSK 133
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BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A7S3Y9B3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9B3_HETAK)

HSP 1 Score: 191 bits (485), Expect = 1.440e-52
Identity = 109/280 (38.93%), Postives = 154/280 (55.00%), Query Frame = 1 
Query:    4 QLFPDVLIYWSFMYLVVIAALVARRWTKLGRFFHAPFRPFGGRLLQPRQNREDVFSRLGVGHGPSYSSSSPCSPRFGWKNGEAFLAMAFFALLLCEGLYWYLDHGWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGD--FWHDWPVAIPTDYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            +L+PD+L+++  +Y+V +  L  +    L RFF                                   SSP + + G   G+  L  AF  LL+CE  YWY  HGW   A+   +  ERFAR +GQ+A+   GL++LPV RN ++  VFG  WE M+ FHR   R  L LV  H   +W  +   +  FW      IP  YH+DN+TI LA L   ++ +AM  L+++ VRR HFEVFYYAHH  +VV+AVML+HAASAW+Y+   ++L  LDRA+RF++
Sbjct:  355 KLYPDILMFYLLIYVVALMGLATQLLPALQRFFF----------------------------------SSPKALQ-GASVGDVCLYSAFGGLLVCEFCYWYFTHGWEEQAVADVSRTERFARAVGQVASACCGLLVLPVARNSLWTHVFGASWEGMLRFHRWAGRAMLVLVAAHGAAWWAFYVQNNYAFW-----TIPQGYHEDNFTIHLAFLAACLLAVAMGALTLERVRRAHFEVFYYAHHVSVVVFAVMLYHAASAWFYMLGGLSLLALDRAMRFAR 594
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BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A7S3XXU3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXU3_HETAK)

HSP 1 Score: 171 bits (432), Expect = 1.300e-44
Identity = 94/198 (47.47%), Postives = 122/198 (61.62%), Query Frame = 1 
Query:  244 GEAFLAMAFFALLLCEGLYWYLDHGWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGDFWHDWPVAIPTDYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            GE  L + F  LL     YWY DH W G+   SK   E  ARTMGQLAN   GL+ LP  RN +F + FGV WE  + FHR M    LA+V++H V FWV  E    ++ +P      YH D+WTIPL  +TT++  I + + + + VRR  FE FYYAHHF LV +  MLWHA S+WYYI   ++L+LLDRA+RF++
Sbjct:  332 GEGVLVLLFVGLLAGLFGYWYGDHLWEGST--SKGSWEMLARTMGQLANAVAGLLTLPAARNNIFSETFGVSWEYTMKFHRWMGNTLLAIVVLH-VLFWVSAEGLTVFY-FP---DPGYHSDDWTIPLTVVTTFLSFIFLGLGTREVVRRTKFEWFYYAHHFALVFFVAMLWHAVSSWYYILGGLSLYLLDRALRFTR 522
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BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A7S3XXM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXM9_HETAK)

HSP 1 Score: 166 bits (421), Expect = 4.060e-43
Identity = 87/199 (43.72%), Postives = 124/199 (62.31%), Query Frame = 1 
Query:  244 GEAFLAMAFFALLLCEGLYWYLDHGWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGDFWHDWPVAIPT-DYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            GE  L + F  LL  +G YWY DH +      SK   E+ ARTMGQLAN   GL+ LP  RN +F + F V WE  + FHR +  + LA+ + H V FW+  E         +++P   YH D++T+PLA++TT+   I + + + + VRR  FE+FYY+HHF LV + +MLWHA S+WYYI   ++L+LLDRA+RF++
Sbjct:  327 GEGVLVLLFAGLLAFQGTYWYYDHCFDRDC--SKEAPEKLARTMGQLANCVAGLLTLPASRNNIFSETFNVSWEYTMKFHRWLGNLILAITVFH-VLFWIQAEGLGV-----LSLPAPSYHSDDFTVPLASITTFFAFIFLGLGTREVVRRTKFEIFYYSHHFALVFFVMMLWHALSSWYYILGGLSLYLLDRALRFTR 517
[Close]
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A8J2SNU6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNU6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.350e-34
Identity = 97/290 (33.45%), Postives = 145/290 (50.00%), Query Frame = 1 
Query:    4 QLFPDVLIYWSFMYLVVIAALVARRWTKLGRFFHAPFRPFGGRLLQPRQNREDVFSRLGVGHGPSYSSSSPCSPRFGWKNGEAFLAMAFFALLLC-EGLYWYLDHGWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGDFWHDWPVAIPTDYH-----------QDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            +++PDV++Y++F+  + + A   R              P  GRLL+ R     V                          GE  +A+  FALLL  EG Y ++DH +  A+  +K   E  AR  GQ AN+ + L++LPV R  +  + FG+ WE ++  H  +    L L +VH + ++ V+     + +  + IP  Y             D+WT+PLAT+TT++ +I + VLS   VRR HFEVFYY HHFF+ V+AV LWHAAS WY +  S+     DR  R S+
Sbjct:  301 KVYPDVVLYYAFLAALAVIACAGR------------VSPRVGRLLRRRLRMGSV--------------------------GEC-VALGLFALLLVLEGRYAFVDHQY--ASDPTKGRWEVVARGFGQFANLGLALLLLPVARTSIIAEAFGLAWEQLLWVHIWVGYATLLLFVVHALCWYKVYAALHIFPEDVLEIPMYYPTNGQPKSAGRCSDDWTVPLATITTFLALIFLGVLSHHQVRRNHFEVFYYTHHFFIAVYAVALWHAASCWYLVVGSLVHACADRMARLSE 549
[Close]
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: UPI0004F4952C (ferric reductase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F4952C)

HSP 1 Score: 129 bits (324), Expect = 7.690e-31
Identity = 72/195 (36.92%), Postives = 106/195 (54.36%), Query Frame = 1 
Query:  277 LLLCEGLYWYLDHG----WSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGDFWHDWPVAIPT---DYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAH-HFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            +LL   LYW   H     W+G A D     ER+AR++GQLA   + L I P  RN +   + G  WES +  H+ +    L     HMV ++V + +   +     +IP      H DN+T+PL TLTTW M++AM V +++ VRR  FE+FYY H   F ++   +LWHAA+AW Y    + +W +DR +R  +
Sbjct:    1 MLLLFFLYWIQGHNFNSYWTGGADDGMRKSERWARSLGQLAVAFLSLCIFPASRNSLLHSILGTAWESSIWVHKVLGYGMLLATTGHMVAWYVRYSEVGMFPRGIFSIPPVEPPGHVDNFTVPLITLTTWFMLLAMGVFALEPVRRRFFELFYYLHVAAFYMIAPTVLWHAAAAWEYFLPGLTVWFVDRLLRMHR 195
[Close]
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A7J6Y805_TRYCR (FAD-binding FR-type domain-containing protein n=20 Tax=Trypanosoma cruzi TaxID=5693 RepID=A0A7J6Y805_TRYCR)

HSP 1 Score: 124 bits (312), Expect = 1.660e-28
Identity = 71/206 (34.47%), Postives = 108/206 (52.43%), Query Frame = 1 
Query:  244 GEAFLAMAFFALLLCEGLYWYLDHG----WSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGDFWHDWPVAIPT---DYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHF-FLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            GEA  A    A+LL   LYW   H     W+G +       ER+AR +GQLA   + L++ P  R  V   + G  WES +  H+ +    L   + HMV F+V +           +IP      H +N+T+PL +LTTW M++AM + +++ VRR  FE+FYY H   F ++   +LWH+A+AW Y    + +W +DR +R  +
Sbjct:  241 GEASFAFLTLAMLLLFFLYWIQAHNFNMSWTGGSDAGIKASERWARALGQLAVALLSLLMFPASRFSVLHSILGTSWESSIWVHKVLGYGMLLATVGHMVAFYVCYGQAGKLPRGIFSIPMVDKPGHINNFTVPLISLTTWFMIVAMGLFALEPVRRRFFELFYYLHILSFYMIAPTVLWHSAAAWEYFLPGLTVWFVDRLLRMHR 446
[Close]
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A3R7NEJ6_9TRYP (Putative ferric reductase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7NEJ6_9TRYP)

HSP 1 Score: 122 bits (306), Expect = 7.880e-28
Identity = 78/215 (36.28%), Postives = 117/215 (54.42%), Query Frame = 1 
Query:  232 GWKNGEAFLAMAFFALLLCEGLYWYLDH----GWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVF-EDGDFWHDWPVAI---PT---DYHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAH--HFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            G+  GEA  A    A+LL   LYW   H     ++G +       +R+AR++GQLA   + L+I P  R  V   + G  WES +  HR +    L   + HMV ++  + E G+F    P A+   PT     H +N+T+PL +LTTW M++A+ V +++ VRR  FE+FYY H   F+++  AV LWHAA+AW Y    + +W  DR +R  +
Sbjct:  321 GFTWGEAGFAALTVAMLLLFFLYWIQCHKFNTSFTGESAAGVKASQRWARSLGQLAVALLSLLIFPATRFSVLHSILGTSWESSLWVHRVLGYGMLLATVGHMVAWYFFYGETGNF----PRAVFSVPTLDPPVHGNNFTVPLISLTTWFMLVAVGVFALEPVRRRFFELFYYLHVLSFYMIAPAV-LWHAAAAWEYFLPGLTVWFADRLLRMHR 530
[Close]
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Match: A0A422N2V3_TRYRA (Putative ferric reductase n=3 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A422N2V3_TRYRA)

HSP 1 Score: 121 bits (303), Expect = 2.860e-27
Identity = 78/219 (35.62%), Postives = 120/219 (54.79%), Query Frame = 1 
Query:  229 FGWKNGEAFLAMAFFALLLCEGLYWYLDH-------GWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVFGVGWESMVAFHRRMSRVFLALVLVHMVFFWVVF-EDGDFWHDWPVAI----PTD--YHQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAH--HFFLVVWAVMLWHAASAWYYICASVALWLLDRAIRFSK 837
            F W  GEA  A+    +LL   LYW   H       G + A +++    +R+AR+ GQLA   + L+I P  R  +   +FG  WES +  H+ +    L   + HM+ ++V + + G      P AI    P D   H DN+T+PL +LTTW M++AM V +++ VRR  FE+FYY H   F+++V   +LWHAA+AW Y+   + +W +DR +R  +
Sbjct:  322 FTW--GEAGFALLTVTMLLLFFLYWIQCHNFKMLFAGGNDAGMEAV---QRWARSFGQLAVALLSLLIFPSTRFSLLHSIFGTSWESSLWVHKVLGYGMLLATVAHMLAWYVFYGQMGKL----PRAIFSIPPMDPPLHVDNFTVPLVSLTTWFMLVAMGVFALEPVRRRFFELFYYLHVLSFYMIV-PTVLWHAAAAWEYLLPGLTVWFVDRLLRLHR 530
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8351.17355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA77_9PHAE1.600e-13871.53FAD-binding FR-type domain-containing protein n=1 ... [more]
D7FS88_ECTSI5.840e-6979.55Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A7S3Y9B3_HETAK1.440e-5238.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XXU3_HETAK1.300e-4447.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XXM9_HETAK4.060e-4343.72Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SNU6_9STRA3.350e-3433.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI0004F4952C7.690e-3136.92ferric reductase n=1 Tax=Trypanosoma grayi TaxID=7... [more]
A0A7J6Y805_TRYCR1.660e-2834.47FAD-binding FR-type domain-containing protein n=20... [more]
A0A3R7NEJ6_9TRYP7.880e-2836.28Putative ferric reductase n=1 Tax=Trypanosoma cono... [more]
A0A422N2V3_TRYRA2.860e-2735.62Putative ferric reductase n=3 Tax=Trypanosoma rang... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8351contigL-elsbetiae_contig8351:1263..8544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.2
Seed ortholog evalue7.8e-56
Seed eggNOG ortholog2880.D7FS88
Preferred nameFRO1
KEGG koko:K00521
Hectar predicted targeting categorysignal anchor
GOsGO:0000293,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006091,GO:0006810,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009987,GO:0015688,GO:0015979,GO:0016020,GO:0016491,GO:0016722,GO:0016723,GO:0019684,GO:0022900,GO:0042592,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771,GO:1901678
EggNOG free text desc.oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
EggNOG OGsKOG0039@1,KOG0039@2759
EC1.16.1.7
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionFerric reductase transmembrane component-like domain
Ec32 orthologEc-05_004940.1
Exons6
Model size840
Cds size840
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8351.17355.1prot_L-elsbetiae_contig8351.17355.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8351 1263..8544 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816917.4956636-CDS-L-elsbetiae_contig8351:1262..14181622816917.4956636-CDS-L-elsbetiae_contig8351:1262..1418Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 1263..1418 -
1691683910.9130871-CDS-L-elsbetiae_contig8351:1262..14181691683910.9130871-CDS-L-elsbetiae_contig8351:1262..1418Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 1263..1418 -
1622816917.5093293-CDS-L-elsbetiae_contig8351:2678..28191622816917.5093293-CDS-L-elsbetiae_contig8351:2678..2819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 2679..2819 -
1691683910.9305542-CDS-L-elsbetiae_contig8351:2678..28191691683910.9305542-CDS-L-elsbetiae_contig8351:2678..2819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 2679..2819 -
1622816917.5209022-CDS-L-elsbetiae_contig8351:4064..41631622816917.5209022-CDS-L-elsbetiae_contig8351:4064..4163Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 4065..4163 -
1691683910.9394677-CDS-L-elsbetiae_contig8351:4064..41631691683910.9394677-CDS-L-elsbetiae_contig8351:4064..4163Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 4065..4163 -
1622816917.5354836-CDS-L-elsbetiae_contig8351:5456..55981622816917.5354836-CDS-L-elsbetiae_contig8351:5456..5598Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 5457..5598 -
1691683910.9485104-CDS-L-elsbetiae_contig8351:5456..55981691683910.9485104-CDS-L-elsbetiae_contig8351:5456..5598Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 5457..5598 -
1622816917.55764-CDS-L-elsbetiae_contig8351:7068..72831622816917.55764-CDS-L-elsbetiae_contig8351:7068..7283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 7069..7283 -
1691683910.9580672-CDS-L-elsbetiae_contig8351:7068..72831691683910.9580672-CDS-L-elsbetiae_contig8351:7068..7283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 7069..7283 -
1622816917.5680158-CDS-L-elsbetiae_contig8351:8457..85441622816917.5680158-CDS-L-elsbetiae_contig8351:8457..8544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 8458..8544 -
1691683910.9714634-CDS-L-elsbetiae_contig8351:8457..85441691683910.9714634-CDS-L-elsbetiae_contig8351:8457..8544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8351 8458..8544 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8351.17355.1

>prot_L-elsbetiae_contig8351.17355.1 ID=prot_L-elsbetiae_contig8351.17355.1|Name=mRNA_L-elsbetiae_contig8351.17355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
VQLFPDVLIYWSFMYLVVIAALVARRWTKLGRFFHAPFRPFGGRLLQPRQ
NREDVFSRLGVGHGPSYSSSSPCSPRFGWKNGEAFLAMAFFALLLCEGLY
WYLDHGWSGAAIDSKTWQERFARTMGQLANITMGLMILPVLRNGVFEKVF
GVGWESMVAFHRRMSRVFLALVLVHMVFFWVVFEDGDFWHDWPVAIPTDY
HQDNWTIPLATLTTWVMVIAMFVLSVKWVRREHFEVFYYAHHFFLVVWAV
MLWHAASAWYYICASVALWLLDRAIRFSK*
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mRNA from alignment at L-elsbetiae_contig8351:1263..8544-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8351.17355.1 ID=mRNA_L-elsbetiae_contig8351.17355.1|Name=mRNA_L-elsbetiae_contig8351.17355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7282bp|location=Sequence derived from alignment at L-elsbetiae_contig8351:1263..8544- (Laminarionema elsbetiae ELsaHSoW15)
GTACAGCTCTTCCCCGATGTTCTGATCTACTGGAGCTTCATGTACCTGGT
TGTCATCGCCGCGCTGGTCGCTAGGAGATGGACAAAGGTGAGCCCCCCCC
CCCCTCCCCTCCCCTTGTGTGTTTTGCGCTTCTGGACCGCACCCCCCTCT
CCTTATCGCCAACAGGGCACGCCGGCTGCATTCCTGGAACCTATACTGCC
CCCCTCGCCCCTCCTCCTCCTCCCTTTGCCTTCTTTTTTGCGGGAAAATT
TCGTTTGTTGTGATATTTACCGTTCATGACACAAGACACCACACCCCCTG
GACAGACTTTTAGAGCTCCATTACATACTCCGAAACGAAGAGGGTGCCAG
CACCAAACGACACATTTTCGCACACAGCCCTCGACTAGATCTGCTCAACG
CCGCCCCCTTTCGGCACTGGTACTCTTCTTGCTGGAGAGGAATCGAGCTT
TGAAAGCCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGCGGTATT
TAGTTTCGTTTTTGGCGTGTGCTGTTTTATGTAGAATTTGCTCGTTTCTC
TACGTCCCATACTTCTACTTGGAAGTTGTGTGTGTGTGTGTTTTTGCTTC
CGCCCAACACGGTTCGGTATGCACGCGTACCAGCCGTGAACCCCCCCCGT
CACTGTCTTGACCCGAGCTCTTCTCTGGGGGGTACGTGACTGACCACGGC
GAAGAGAATGTTGAATGCGGCCATCCGCACGGCAAAAGAGTTGGTGGAGG
CGTGACGTGGGAGCCCGGGTGTAATGGCGTGCGCTGTGGGTGGTGTGGAG
GGTGGTGGTGCTGTGCTCGATCGCTCCCTGTCAAGTCCAAGACGCGGGAC
CCGCCTTGACTGCTGTTGCTGGTGCTGTTGCTGTTGTTGTTGCTGTTGCT
TTCGTTGATGACGCTTATTTGTGCTTTCGTCCTTTCGGTGTTGTTGTTGT
TGCTGCTGCTGCTGCTGCTGCTGCTGTCGGTGTTGCTGCTGCTGTTGCTC
TCTGTTACTACCCGCCGTCAAGGTGCCGCTGCTATTACTGTCGCGATTGC
TACATGCTGTTGGTTTTCATTTGTTGTATGTACTCCCTTGTTCTTGTTGT
GCCTTCTCTCTTCTTTGGAGCCGCTGCTGTTATTGTTACCCCTTAATCTT
CTCTCGAAAAATGGTACAGCAGTGTGCCAGCACGGCGCCCCCGGCAAACA
AGGCCAGATTCCCTCATTCACCTCACGTGTACCCTCTACCCCTCCCTCGT
ACCCACACCAGCTAGGGCGCTTCTTCCACGCGCCCTTCAGGCCGTTCGGC
GGGAGGCTGCTGCAGCCGCGACAGAACCGGGAAGACGTTTTCAGCCGCTT
GGGGGTTGGTCACGGCCCCTCTTATTCTTCTTCTTCGCCCTGTTCTCCTA
GGTTCGGCTGGAAGAACGGGGAGGCGTTCCTCGCGATGGCCTTCTTCGCC
CTCCTCCTGTGTGAAGGTCTCTACTGGTGTGTGTGTGTGTGTGATGAGGT
TATGTACGCGTTGTCAGTCCCTTTTGCGGGTCCCTGTAGATATAGCTCGC
TTTGCATTATTGTATGCCTGCTCGAAAGTACAACAAGATATATACCATCG
ATATCGTGGCAGCTGTTTGACTGTGGGGCCTACGGTAGCAAAGCCCCCAT
AATATGGGTAGGTTTGTGGGTGGGGTGAGGGGTGTAAAAAATGAGGGTGT
GAGAACACTGACTGACTACTGTGTGTGTGGTGGTTGCCAAACCGTTGCTG
TTGCAAGGCTTCTCTTTTCTTCCTCGCTTTATTTCGCGCATCATCGATCA
CAACGAGAGCCTTTTCACCAGGCTCAACCCCCCCGTCGTCTCTCTCTCTC
TGAAGGTGAGCAGTCTCGTGGATCCTACCGTAAGTGACACAAGATTCCAC
ACCCCCTGGGCCGAATTTTAGAGCTCCATTACTCCGTAACGAAGAAGGTG
CCAGCACCAAACGGCACATTTTCGGGCAGCCCTCGCCTAGATCTTTCCAA
CGCACCCCCTTTTGGCACTGGCACTCTTCTTGCTGAAGAGGAATCGAGCT
TTGAAAATCCGTCCAGGGGGTGTGGTATCTTGTGTCACGTATGGTATGTA
CAGCAGTTAGTCAGGCGGTGAAAAAGGAAGAGGAGAACACGAGACCGCAT
CTGCCTACAACAGAGTGGCTCGGTCAAGAGACACGAACGACGGTCACACG
CAGAACCAACATGTAGCGCGGTTGTCGCCGGCGTATGGTTTAGGATTGAG
ATGACGCTTGCCTGCTGCTACATACGGCACGGAACGCCCCTCCTTTATGG
GACCCCTAAGGGAGGGGGGCTCCTCGAATCGGTCGCATATCACCCACGAA
AACACGGACTACACTTTTATCACGGTGCATACAGGACATACTGCCAAAAC
CAGGTAGGTAGTTGGACTAGCCTCATTCACGGGCCGCCTTAAATAGAGGG
GTCCCGTTAATCGGCCTTCTTTTACGAAAAAAACGGCGCTCTGTCGTGAC
ACATACTGCTGTACTGCCGAAAGCAGGTAAAACTTGGACCAGCCTCATTC
ACGTGATTGTGGACGTGTGGTTTATTTAGTCAGTCGGACACACATCCCGG
TTGGGTCGTGTAGCCAGTCGTAGTGGAGGAAGGGGGCCAGTGGGGCAGAC
GACGAATAAGCCAACAATGGGAAGAAGAAATAAGGTGTACCTTTCGATCC
TCTGGTGCCCCTTTCATTTCCTGCGTGTGGTTTCTTAGAATATGTTGATG
GCTCCAGCACTTTCGTGACCACGGGGGGCCCCGTGAGTTGCTAGATTGTC
GGCATTAATAGCGATCTCGACTCTTAACAAGATAATTATGCGAAGAAAAC
AGTAACAAAAAAACGTGACCTCCGTAGATCGGCTTTATTCTACCGAAACA
AACGATTCTCTCTCTCTGTCACGGTGCTGCACTCTGCCAAAAACAGGTAC
TTGGACCACGGTTGGAGCGGCGCAGCGATCGACTCCAAGACTTGGCAGGA
GCGCTTCGCACGGACCATGGGCCAGCTGGCCAACATCACCATGGGGCTGA
TGATCCTACCGGTGCTGCGCAACGGCGTCTTCGAGAAGGTGCGTCGGCAG
CTGGCGTTGGTATCCGCCATTGTTGTTGCTGTTGTTGATGTTGATGTTTG
TTGTTGCTGTTGTTGATGTTGGTGTTGTTGGTGTTGTTGCTGTTGATGTT
GTTGTTGCTGTTGTTGATGTTGATGCTGATGTTGATGTTGATGTTTCTTC
TTGCATTGGCCCTCACACATGGCCCACAAACATCCACGGGGTCCCCTGGT
CGTGCACCACGCCGCCGCAAAGAACCCCACCAAGGAGAAAAGGTAGGAAG
CACACGCGCCCTACTTCAGTACAAAAGTAAGGTTGTACTTATAGCGCAAT
GCACACATGGGTAACTTGGAGGTCAGGCCATCCACACGGCCGTATGTTTG
GGGTCGTACGTAGGGCCGTCGCCCCGCCGTTGTCGAAGCTTTTGAGCGAC
TGTTGTACGCATGTACCGCACGCGCCACCACTCAAGAACTTGGGAAGTTA
AAAAGAAACTCGGGAAAAGTAAAATATAAGAACTTGCCCGCATTTGAGAT
ACCTGGATAAGAACCTCTACACTATAAGCTATATAAATGCAAAATATGAA
GAGCATTAGTTTTCCCCACAGAGACATACATAAGAACCCGAGCCTCGCTC
GAAATAGGAGGTGGCGTGTGCTGTAGCTGGCCTTGGTTTGCGAAATGGCA
CGAGATTGCAGAGGTTTGCTGGTCGGTTTCTGCGTGCAGATGCAGAATGG
AAGGCCAGACGCCTTGCGAAGATCGACTCGTCGCTCTCAGCGAATGATGA
GGGGAGGTCAGCCAAGCGGCGACCGGGCGCCACGAGTACCGTAGGTGACA
CAAGATACCACACCCCCTGGACAGATTTTCAGAGCTTGGTTCCCTCCCCA
GCAAGAAGAGTGCCAGTGCCGAAAGGGGGTGGCGTTGCAAAGATCTACAC
GATGGCTGTCCGAAAATGTGTGGTTTGGTGCTGGCACCCTCTTTGTTACG
GAGTAATGGGGCTCTAAAAGTCGGTCCAGGGTGTGTGGTATCTTGTGTCA
CCTACTGCTGTACCGCTGCTGTTGGGCCACAACAGGCTTTCTTTCTGACC
GTGCACACACCCTTCCCATACCAACCGCTATTGTCCAGGTGCTCTCTCTG
CATAAATACGCGAATGACTATGTTTGTATGCATTAGGCGTGGGAGAACTG
AGCCGGTGTGTATCACGCAAGACGTACCTTCCAACACCGACCGACCTCTG
TTGATCAGCTGCTCCTCCTAAACGCTACGATGCGTTAGGCAGGCATGGGA
AAACTGAGTCGTTGTGTCCCATGGCGAGCAGGTGTTCGGCGTCGGGTGGG
AATCGATGGTAGCCTTCCACAGACGCATGTCCCGGGTCTTTCTGGCGCTG
GTTCTCGTGCACATGGTCTTCTTCTGGGTGGTAAGGCCACGTTTCGCATT
CTTCATCCTTCTGCTGTTGACAACCGCTTCCTCCCTTTCCAGTCGATGGC
ATTGATTGGAATTCCGCAGACTTGCCCAGCTTCAAGGAGTGCAGGCTGGT
CTATAGGTGTCGTTTAGGTTTTTGTGGGTATTTAGCTCACGCCGCCCAGG
AGGTTCTGAGCGCAAAATGCATGGAGATTGATCCGTCGAGAGACGCTTAT
AATGCGCCTTTCTTTTTTTTGGTTGAGCTTCCGCCCCCGGGTGACCTCGT
GCGAAACCAAGTCTGCCTGCTGCTTGACGGCCTGTTTTTCTCTTACTTCC
TGTGCGTGTTCCGGTGTTGTTACAGGCAGTATATGCGCCGGGATGACGCG
TTCTGTTTATCTGTCTGTCTGTCTGTCTGTCTGTCAGTCTTTCTCTCTCG
CTGCCTTTTGAAAGATAAGCAGATAATCAAAAATGGAACCTAACCCACAT
TGGAGACGGGACTCCCGTGAGAATTTTCGGTATTCTATATAGTGACGTAA
CATTGGGCCGGCCGAGTAGAAAAACGCCTAAAATATTAGAAGATTCAACA
TCTCCCCTGCAGTTCTCTGCCCGGTCAAACAACATGTATTCCGGGGAGAA
ACCCTCCGTGAGGTCGTGGTATTGTCAACAACTTCTATGATAGGAACACA
TATTTCATCTCTCTCTCTCCCTCTCTCCCTTTCTCCCTTTCTCCCTCCCC
CCTCCCCCTTTCTCTCTCTCTCCCGCTCTCCCTCTCTCGCTCCCTCCTTC
TCTCCCTCTCTCCCTTCTCAATTTCTTCCTCTCTCCCCCCCCTTTTATCT
CTCTCTTTCTATATTTCTCTCTCTCTCCCTTCTCCCTCTCTCCCTCCCCC
CCTCGCCCGTATGGAGTCAATCAGCGGCATCGCTCTGCCGACATGCTTGT
AGTGTTATAAACGACCAAATAGATATAGTTTAAGCACAAGTAAAGTCAGC
CATCGCCATCGACCGACAACCACGAACAAAAAAAGATACCTACGTTTTTG
GCATCAGATCCCATATCCCGCTCGCTCGCCCCACCAAAGACGCATGGCAT
CATCCCGTACGACCCCCCCCTTGCAAAACGTAGTCTCTGTGTGTATGTGT
ATGCATATTTCCGTGATATCCCCCAATTCTTCCATTGTCGGTCTCATAAG
CACCCCATTGTCGGTCCCATACATACATAAGCACGCGTTCCTTTGTTATG
TATTCCCCCCACGCCACACGAACAGGTCTTCGAAGACGGCGACTTCTGGC
ACGACTGGCCCGTCGCAATCCCCACAGACTACCACCAGGACAACTGGACC
ATCCCCCTCGCGACGCTCACCACCTGGGTCATGGTCATCGCCATGTTCGT
GCTGTCGGTGAAGTGGGTAAGAACGCGTGTACGTACAGAGCAGACAGACA
GACAGACAGACAGGCAGACAGCAGATGGAGATTTCCGCCTTCTCTGTCTT
CCTTCTCCCTCTCTCTGTTTTTTGGCACACATCGGCGCGATGGGCACAAG
AGACCAGCAGGCAGAAAGCGAGGATTTTTTTGTTTTGTCTCTAACTCCAG
TCGTATACCCTTTGTGAGGGTACACACAGTGGCGTTGTAATCGAGTGGTT
TGTTTCTATCCTGGGCACATGTAGTCTATAGTGATATAACCTCCCCTGTT
ATTAATTAACAGGCTCGACAAGACAGTATGGTTGCCATCTTGTGCATTTT
TCTTTTTTTTGCTCAAAAGTGTTAAATGTTCTGCATAAGAATGCCGGCGG
TCTACGCCCGACCGGTGAGAAATGGAAAGAGGCGTTCCAGGGGGGCTAAA
CTACTACCACTGCTGTTGTAGACACTACATACATACATATAACCCTCCCT
CACCGCGCCCCGACCACTTCCTGTTGAATCTAGTTCTTGGTCCCCGTTTA
GTGGTCATTTGATACAAATTGGATGAGGCTTCCTGCTTTTATAGGCCGGT
GACCCTTCACCCACCCACCCACCCACAAGCTTTTTCACTGCCTCGGTAAA
AAAGAATCGGAATATTTAATTTCGCCGCAAATTGCCCCCGAGAACAGGAA
CGAACCCGATTGTTGGTCCGCCAGAAATACCCGGAGGTCTCGCTCCTACC
CACCACTTGCCGCCGAGAGGACACCGCCTACGCCGGAAATGAAGTTCATC
TAGGAAATAAATCAACCCTAACCCTAACTAAGCCAACCACCGGCCTCCCT
TTCCCGGTTCCCCATAATTTTTCTCATACATATGTTGGCTGAAGATGAAA
AGATGAAAACCCTGCGTACCGTAGGTGACACAAGATACCACACCCCCTGG
ACCGAACTTTAGAGCTCCATTACTCCGCAACGAAGAAGGTGCCAGCACCA
AACGACGCATTTTCGGACAGCCCCTTTGACTAGATCTTTCCGCCGACGCC
ACCCTTTTTGGCACTGGCACTCTTCTGGCGGGGGAGGAATCGAGCTTTTG
AAAATCTGTCCAGGGGGTGTGGTATCTTGTGTTACCTACGGTAGACTACT
GCGCCGAAGAAGGACCTCTTGTCATCCACTCTCTCAACCTTGCTCTGTCC
CGCCGCCCCCTTTAGGTGTGCGTTGTGCTATGAACGTATATATGATATAT
ATGTATGTATGTATGATACGACACAGGTGCGGCGGGAACACTTCGAGGTG
TTCTACTACGCCCACCACTTCTTCTTGGTGGTGTGGGCGGTGATGCTGTG
GCACGCGGCCTCGGCGTGGTACTACATCTGCGCCTCCGTCGCCTTGTGGC
TCCTCGACCGGGCCATCCGCTTTTCCAAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8351:1263..8544-

>mRNA_L-elsbetiae_contig8351.17355.1 ID=mRNA_L-elsbetiae_contig8351.17355.1|Name=mRNA_L-elsbetiae_contig8351.17355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig8351:1263..8544- (Laminarionema elsbetiae ELsaHSoW15)
GTACAGCTCTTCCCCGATGTTCTGATCTACTGGAGCTTCATGTACCTGGT
TGTCATCGCCGCGCTGGTCGCTAGGAGATGGACAAAGGTACAGCTCTTCC
CCGATGTTCTGATCTACTGGAGCTTCATGTACCTGGTTGTCATCGCCGCG
CTGGTCGCTAGGAGATGGACAAAGCTAGGGCGCTTCTTCCACGCGCCCTT
CAGGCCGTTCGGCGGGAGGCTGCTGCAGCCGCGACAGAACCGGGAAGACG
TTTTCAGCCGCTTGGGGGTTGGTCACGGCCCCTCTTATTCTTCTTCTTCG
CCCTGTTCTCCTAGGTTCGGCTGGAAGAACGGGGAGGCGTTCCTCGCGAT
GGCCTTCTTCGCCCTCCTCCTGTGTGAAGGTCTCTACTGCTAGGGCGCTT
CTTCCACGCGCCCTTCAGGCCGTTCGGCGGGAGGCTGCTGCAGCCGCGAC
AGAACCGGGAAGACGTTTTCAGCCGCTTGGGGGTTGGTCACGGCCCCTCT
TATTCTTCTTCTTCGCCCTGTTCTCCTAGGTTCGGCTGGAAGAACGGGGA
GGCGTTCCTCGCGATGGCCTTCTTCGCCCTCCTCCTGTGTGAAGGTCTCT
ACTGGTACTTGGACCACGGTTGGAGCGGCGCAGCGATCGACTCCAAGACT
TGGCAGGAGCGCTTCGCACGGACCATGGGCCAGCTGGCCAACATCACCAT
GGGGCTGATGATCCTACCGGTGCTGCGCAACGGCGTCTTCGAGAAGGTAC
TTGGACCACGGTTGGAGCGGCGCAGCGATCGACTCCAAGACTTGGCAGGA
GCGCTTCGCACGGACCATGGGCCAGCTGGCCAACATCACCATGGGGCTGA
TGATCCTACCGGTGCTGCGCAACGGCGTCTTCGAGAAGGTGTTCGGCGTC
GGGTGGGAATCGATGGTAGCCTTCCACAGACGCATGTCCCGGGTCTTTCT
GGCGCTGGTTCTCGTGCACATGGTCTTCTTCTGGGTGGTGTTCGGCGTCG
GGTGGGAATCGATGGTAGCCTTCCACAGACGCATGTCCCGGGTCTTTCTG
GCGCTGGTTCTCGTGCACATGGTCTTCTTCTGGGTGGTCTTCGAAGACGG
CGACTTCTGGCACGACTGGCCCGTCGCAATCCCCACAGACTACCACCAGG
ACAACTGGACCATCCCCCTCGCGACGCTCACCACCTGGGTCATGGTCATC
GCCATGTTCGTGCTGTCGGTGAAGTGGGTCTTCGAAGACGGCGACTTCTG
GCACGACTGGCCCGTCGCAATCCCCACAGACTACCACCAGGACAACTGGA
CCATCCCCCTCGCGACGCTCACCACCTGGGTCATGGTCATCGCCATGTTC
GTGCTGTCGGTGAAGTGGGTGCGGCGGGAACACTTCGAGGTGTTCTACTA
CGCCCACCACTTCTTCTTGGTGGTGTGGGCGGTGATGCTGTGGCACGCGG
CCTCGGCGTGGTACTACATCTGCGCCTCCGTCGCCTTGTGGCTCCTCGAC
CGGGCCATCCGCTTTTCCAAGTGAGTGCGGCGGGAACACTTCGAGGTGTT
CTACTACGCCCACCACTTCTTCTTGGTGGTGTGGGCGGTGATGCTGTGGC
ACGCGGCCTCGGCGTGGTACTACATCTGCGCCTCCGTCGCCTTGTGGCTC
CTCGACCGGGCCATCCGCTTTTCCAAGTGA
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