mRNA_L-elsbetiae_contig8343.17348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: D7FQ35_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ35_ECTSI) HSP 1 Score: 557 bits (1436), Expect = 3.130e-185 Identity = 288/332 (86.75%), Postives = 313/332 (94.28%), Query Frame = 1 Query: 1 LSQLGRKWGKHSIRTVPARRWEYVRAATAVACLAATITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMRRSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIVLTGGSHRTNDPD-YFDFVIENLPKKDISASWDRLGEGLHSKDKTQLFARLPEH 993 + +LGRK GKHSIR VPARRWEYVRAATAVACLAAT+TAVLSFFPGRFTRLTPLTTFK LLS+GDLS IW+SGFTD+IF+ALPVSI TWIITAA+GT+VTVPSGDFIQTTV+GATVGRLIGE+LAV+LSE GVVPSTFALVGAAAMSCGATQTISAAVVI+EMTGSF+LDKPVLLAAVVACGFSR+FGLNIYDSVMRLNGLESLYGLDMRRS+EMTAKDIM++DLKVVPCQTTIGEL+ LLRG +GGL MFESYPVVTGL+GMAFVGTVSRKDLVHIVLTGGS D D YFD+VI+ LPKKD+SASWDRLGEGLHSKDKT LFARLP+H Sbjct: 847 MLKLGRKLGKHSIRAVPARRWEYVRAATAVACLAATMTAVLSFFPGRFTRLTPLTTFKHLLSKGDLSSIWSSGFTDNIFIALPVSIVTWIITAAMGTSVTVPSGDFIQTTVIGATVGRLIGEVLAVNLSESWGVVPSTFALVGAAAMSCGATQTISAAVVILEMTGSFDLDKPVLLAAVVACGFSRKFGLNIYDSVMRLNGLESLYGLDMRRSEEMTAKDIMDSDLKVVPCQTTIGELVRLLRGGEGGLSMFESYPVVTGLEGMAFVGTVSRKDLVHIVLTGGSETCCDSDAYFDYVIDKLPKKDVSASWDRLGEGLHSKDKTNLFARLPDH 1178
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A6H5JXR7_9PHAE (Chloride channel protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR7_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 2.040e-136 Identity = 221/255 (86.67%), Postives = 237/255 (92.94%), Query Frame = 1 Query: 232 IFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMRRSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIVLTGGSHRTNDPD-YFDFVIENLPKKDISASWDRLGEGLHSKDKTQLFARLPEH 993 IF+ALPVSI TWIITAA+GT+VTVPSGDFIQTTVVGATVGRLIGE+LAV+LSE GVVPSTFALVGAAAMSCGATQTISAAVVI+EMTGSF+LDKPVLLAAVVACGFSR+FGLNIYDSVMRLNGLESLYGLDMRRS+EMTAKDIMETDLKVVPCQTTIGEL+ LLRG +GGL MFESYPVVTGL+GMAFVGTVSRKDLVHIVLTGGS D + YFD+VI LP KD+SASWDRLGEGL SK KT LFARLP+H Sbjct: 625 IFIALPVSIVTWIITAAIGTSVTVPSGDFIQTTVVGATVGRLIGEVLAVNLSESWGVVPSTFALVGAAAMSCGATQTISAAVVILEMTGSFDLDKPVLLAAVVACGFSRKFGLNIYDSVMRLNGLESLYGLDMRRSEEMTAKDIMETDLKVVPCQTTIGELIRLLRGGEGGLSMFESYPVVTGLEGMAFVGTVSRKDLVHIVLTGGSETCCDSETYFDYVINRLPNKDVSASWDRLGEGLDSKHKTNLFARLPDH 879
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A6H5JIC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC8_9PHAE) HSP 1 Score: 130 bits (328), Expect = 5.580e-30 Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 7 QLGRKWGKHSIRTVPARRWEYVRAATAVACLAATITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDS 231 +LGRK GKHSIRTVPARRWEYVRAATAVACLAA +TAVLSFFPGRFTRLTPLTTFKELL E DLS IW+SGFTDS Sbjct: 866 KLGRKLGKHSIRTVPARRWEYVRAATAVACLAAAMTAVLSFFPGRFTRLTPLTTFKELLIEEDLSSIWSSGFTDS 940
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A1W0A2B5_9STRA (Chloride channel protein 1-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2B5_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.730e-28 Identity = 89/240 (37.08%), Postives = 127/240 (52.92%), Query Frame = 1 Query: 109 ITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMR--RSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKD 822 I A + F PG F RL+ +L S L W G +SI L + +I + A+ VPSGDFI GA GRL GELL++ E VV +ALVG AA+ +TQTIS AV+ +E+TG F P+ LA +++CG S+ ++IYDS + GL L L R++ + A+D+ME D++ +P QTT+GE+ L+ Q S P+V F G V+R + Sbjct: 380 IVAAIMFCPGPFMRLSIANALADLTSPNSLPTTWAFG--NSIIWPLLIYSGARVIVTMMSVALPVPSGDFIPLFSAGAAFGRLYGELLSMCFPELE-VVAGGYALVGGAALVAASTQTISVAVIALELTGQFIYFTPLFLAVLLSCGLSKGLSVSIYDSAIISKGLPYLPMLRCNELRTERICARDVMEDDVQFLPNQTTLGEIKHFLQQSQS------SVPIVLDRTSRLFAGCVARDE 610
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A1V9YG29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG29_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.540e-27 Identity = 87/250 (34.80%), Postives = 132/250 (52.80%), Query Frame = 1 Query: 103 ATITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMR--RSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIVLTG 846 A + AV+ + PG FTRL+ L S L+ W G + +F L V A+ ++ + A+ VPSGDF+ GA GRL GE LA + +VP +ALVG A++ +TQTIS AV+ +E+TG F P+ LA +++CG S+ ++IYDS + GL L L R++ + A+D+M+T++ + TT+ ++ L + G S PVVT DG G R +L +V G Sbjct: 368 AVVVAVIVYCPGPFTRLSIADALGGLTSPAALAATWRYG--EHVFGPLAVYFASRMLVTMMSVALPVPSGDFLPLFSAGAAFGRLYGEALAAAFPDVP-IVPGGYALVGGASLVAASTQTISVAVIALELTGQFIYFTPLFLAVLLSCGTSKGLSVSIYDSAIISKGLPYLPMLRCNELRTERIGARDVMQTEVACLADDTTLADVAAFLDANAGA-----SIPVVT--DGRLLAGCAGRDELAALVAAG 607
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A067D8N9_SAPPC (Chloride channel protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8N9_SAPPC) HSP 1 Score: 112 bits (280), Expect = 9.350e-24 Identity = 91/266 (34.21%), Postives = 130/266 (48.87%), Query Frame = 1 Query: 103 ATITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMR--RSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIVLTGGSHRTNDPDYFDFVIE 894 A + AV+ + PGRF L L S L +W G D F L + ++ L A+ VPSGDFI GA GRL GE+L V VVP +ALVG A++ +TQTIS AV+ +E+TG F P+ LA +++CG S+ ++IYDS + GL L L R++ + A+D+M D+ + TT+ E+ L S P+V +G F G VSR +L +L + DP V+E Sbjct: 351 AMVVAVIVYCPGRFLGLGISDALGALTSPDALPSVWWYG--DHPFGPLAIYFVARLLITMLSVALPVPSGDFIPLFSAGAAFGRLYGEVL-VDWFPSIPVVPGGYALVGGASLVAASTQTISVAVIALELTGQFIYFTPLFLAVLISCGLSKGLSVSIYDSAIISKGLPYLPMLRCNELRTERIVARDVMMNDVPCLANSTTMAEIADFL-----ATHPRSSVPIVH--EGRLFAGCVSRDEL-EALLASSPELSTDPVELASVLE 605
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A2P4XD43_9STRA (Chloride channel protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XD43_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.060e-20 Identity = 81/263 (30.80%), Postives = 137/263 (52.09%), Query Frame = 1 Query: 55 RRWEYVRAATAVACLAATITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFG-LNIYDSVMRLNGLESLYGLDMRRSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRM-FESYPVVTGLDGMAFVGTVSRKDLVHIV 837 ++W+ V + +T+TAVL+F PG++ + + L ++G+L W S + AL + A ++ L + +P+G ++ T + GA GR+ GE++A+ S S V+P T+AL GAAA AT+ IS AV+ +E+T + + P+ A++ A S F ++YD+++ +NG+ L D + +TA DI+E+ L + +TTI +LL L+ R+ PVV M +G VS L V Sbjct: 398 QKWKKVLVVWIDPLVVSTLTAVLTFVPGKYAQHNSMHDLAILFTDGELPSAWQE---ISKYYALLILSALFMFLLPLCITLKIPTGIWVPTFIAGAAFGRMFGEIVAIIFSS-SNVIPGTYALAGAAAFGTAATRAISVAVITLEITAAMSMILPLFCASLTAMAVSNLFKEKSVYDTLLIVNGMPFLPLADFEPT--VTAGDIVESCLVYITKRTTIARILLALQ------RLPHHEIPVVDDEVSMILLGVVSGSQLRRFV 648
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A7S3LX11_9EUKA (Chloride channel protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LX11_9EUKA) HSP 1 Score: 98.6 bits (244), Expect = 4.870e-19 Identity = 76/224 (33.93%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 169 FKELLSEGDLSDIWTS-GFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMRRSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIV 837 FK G+LS W S+ +L + I + + +PSG + +GA +GRL ELL G G+ P FA+VGAA+M+ G TQTISAAV+ E+T S +L PVLLA ++A S G +IYDS+++L L L G R+S A DI+ +++ + +TT EL L + + P+V + M +G+V R L+ + Sbjct: 406 FKNSEVLGNLSSNWHRFSVAGSVQASLVILIFVKFFLTVISITLPLPSGVYTPVFTIGAALGRLXXELLESSNLSG-GLPPGAFAVVGAASMASGVTQTISAAVITFELTNSADLHLPVLLATLIANAISTAIGPSIYDSMVQLRKLPVLGGFKHRKSLLKPAGDIVNRNVRFLSKETTYQELDRTLTYVS---KAYTRIPLVNSPENMRLIGSVRRSALMQSI 625
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A7S1KLQ8_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KLQ8_9EUKA) HSP 1 Score: 98.2 bits (243), Expect = 7.330e-19 Identity = 78/252 (30.95%), Postives = 132/252 (52.38%), Query Frame = 1 Query: 109 ITAVLSFFPGRFTRLTPLTTFKELLSEGDLSDIWTSGFTDSIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGSGVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGLDMRRSDEM-----TAKDIMET-DLKVVPCQTTIGELLLLLR-GDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIVLT 843 +TA LSF P + +P + L S +SD +++ L +S + + ++ + +P G F V+GAT+GR+ GE++ G VP +A+VGAAA++ +T T+S A+++ E+TG + PVLLA A G S F L IYD++++L GL L +D R + + T +DIM+T D V ++ I ++ +LR DQ + +P+V M +G + R +L ++L+ Sbjct: 370 LTATLSF-PLPLLKGSPQAVTQRLFSNKSISDE-----IPYLYLNLILSFSAKFLLTSMAIVLPLPCGLFTPIFVIGATLGRIFGEIVT---DLGVDTVPGGYAVVGAAALASASTGTLSTAIILFELTGQLKYMLPVLLATCCAVGVSNLFNLTIYDTILKLRGLPYLALIDRREAQDKNMQHRTVQDIMQTCDDNYVSMESNIRQIEHILRVNDQ------DVFPLVDREKSMLLIGAIQRGNLEKMILS 606
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Match: A0A2D0STH3_ICTPU (chloride channel protein 2-like n=2 Tax=Ictaluridae TaxID=7996 RepID=A0A2D0STH3_ICTPU) HSP 1 Score: 95.5 bits (236), Expect = 5.560e-18 Identity = 69/241 (28.63%), Postives = 126/241 (52.28%), Query Frame = 1 Query: 229 SIFVALPVSIATWIITAALGTAVTVPSGDFIQTTVVGATVGRLIGELLAVHLSEGS-------GVVPSTFALVGAAAMSCGATQTISAAVVIMEMTGSFELDKPVLLAAVVACGFSRQFGLNIYDSVMRLNGLESLYGL--DMRRSDEMTAKDIMETDLKVVPCQTTIGELLLLLRGDQGGLRMFESYPVVTGLDGMAFVGTVSRKDLVHIVLTGGSHRTNDPDYFDFVIENLPKKDISAS 924 S+FV L S +A+ ++ VP+G F+ V+GA +GRL+GE+ AV L EG ++P ++A+ GAAAMS AT TIS A+++ E+TG P+L + +VA ++ ++YDS++ + L L D + +++ +DIM D+K + +T +L LL L + P+V + +G + + L ++L+ R ++F +N+ +K++ ++ Sbjct: 392 SVFVTLTTSFIMKFFMSAVAISMPVPAGAFVPAFVIGAGLGRLVGEVAAVVLPEGVHSNGTVYSLIPGSYAVAGAAAMSGAATHTISTAMIVFEVTGQINFLFPILFSVIVANIVAQSLQPSLYDSLICIRKLPCPVDLSWDHEENSKISVEDIMVKDVKYITLNSTYRDLQNLL------LTKLRTIPLVKSEESKILLGCIEQAQL-QVLLSHQLSRMRRLEHFRQQAQNMDEKELRSA 625 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8343.17348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8343.17348.1 >prot_L-elsbetiae_contig8343.17348.1 ID=prot_L-elsbetiae_contig8343.17348.1|Name=mRNA_L-elsbetiae_contig8343.17348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp LSQLGRKWGKHSIRTVPARRWEYVRAATAVACLAATITAVLSFFPGRFTRback to top mRNA from alignment at L-elsbetiae_contig8343:250..8142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8343.17348.1 ID=mRNA_L-elsbetiae_contig8343.17348.1|Name=mRNA_L-elsbetiae_contig8343.17348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7893bp|location=Sequence derived from alignment at L-elsbetiae_contig8343:250..8142- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8343:250..8142- >mRNA_L-elsbetiae_contig8343.17348.1 ID=mRNA_L-elsbetiae_contig8343.17348.1|Name=mRNA_L-elsbetiae_contig8343.17348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1986bp|location=Sequence derived from alignment at L-elsbetiae_contig8343:250..8142- (Laminarionema elsbetiae ELsaHSoW15)back to top |