mRNA_L-elsbetiae_contig834.17345.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig834.17345.1
Unique NamemRNA_L-elsbetiae_contig834.17345.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: D7G2G8_ECTSI (Glucose-methanol-choline oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2G8_ECTSI)

HSP 1 Score: 809 bits (2089), Expect = 8.840e-282
Identity = 444/635 (69.92%), Postives = 505/635 (79.53%), Query Frame = 2
Query:   95 MAHPSPTSPTVDTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWTWELGDIEASFESIEAELTLEEQHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRG----TRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAING-SFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAKDQIQARMLETVTSSVD 1984
            MA  SPT+   DTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADA+TL+K+V RP+ W+  A SG+GLSEAF T+PQAGLG R LPA  G GGGG+SNVN  LYQRGR++DY++HW WEL DIEASF+SIEAELTLEE  TTGT+ PSC RMLEE+G +    PSS            +TEPTWT+ GLG   +KRTTTRGGERQ+AW+AFV PVTTMPNL++KDDA VSRVIIEGGRAVGVEVVES P  W         TRVRQLRLAK+ AEI +CCGAFRSPKLLMLSGVGPR HLE+KGV V  DMPHVGENLQDHL+L T NISK  M EAD+TE S H ATYFSCALP        XXXXXXXXXXXXXXX  S     S  +AV+GVL+ DG  L  NL   + ML  RPG  GA  R  VL + WVA W+TP+ RILRG+R  VM +T++KSKGTVRLASGTDA+A P+IDP YFSHP+DR+   E WRT+RRA RET TG+AVFG E+LPGK +N  +DDESFLKFA+  CLP+FHPVGTCRMG+ V+DSVVSAD+LRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAK+Q++ARM+ET +SS++
Sbjct:    1 MAVASPTAD--DTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADASTLAKVVGRPSGWVHQASSGEGLSEAFNTVPQAGLGYRELPAYNGVGGGGSSNVNAGLYQRGREEDYEKHWPWELKDIEASFKSIEAELTLEELPTTGTVAPSCARMLEEVGFKSPPRPSSSRSED------GYTEPTWTRLGLGGCPMKRTTTRGGERQTAWSAFVRPVTTMPNLKIKDDAAVSRVIIEGGRAVGVEVVESAPG-WXXXXXXXXRTRVRQLRLAKDRAEIVVCCGAFRSPKLLMLSGVGPRRHLEEKGVPVVVDMPHVGENLQDHLILATSNISKTRMTEADYTEDSFHSATYFSCALPQEAAAPAGXXXXXXXXXXXXXXXXXSRTEAPSPGAAVVGVLHGDGSFLVRNLSGLITMLFVRPGLFGAVGRGVVLAVIWVATWLTPLTRILRGTRCNVMLVTSVKSKGTVRLASGTDAAAPPVIDPGYFSHPQDRRAMLECWRTIRRAKRETTTGRAVFGFELLPGKKFNDCDDDESFLKFAREFCLPYFHPVGTCRMGREVQDSVVSADDLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAKEQVKARMIETASSSIN 626          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: L1JH16_GUITC (GMC_OxRdtase_N domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JH16_GUITC)

HSP 1 Score: 246 bits (628), Expect = 4.130e-67
Identity = 188/612 (30.72%), Postives = 271/612 (44.28%), Query Frame = 2
Query:  140 CDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWTWELGDIEASFESIEAELTLEEQHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGL--GCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVE-----------DSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAK 1936
            CD+L+VG G S C L + L  AG  V++VE G A+     K+V  P  W   A  G+ +S  + T+PQ  + ++ +PA RG G GGT NVN  ++ RGR++DY++ W W+L DIE  FE  E  L ++     G+    C  M E                   +      E  W ++G+  G Y+  +     G R SAW   VSP      ++V     VSRVI +                                   ++ +C GAF SPK+L+LSG+G  E LE+K V    + P+VG +LQDHL+L     ++ P+   D  +   HG  + +    S                       S  +                  L +N+G  +   V             VL++C +  ++  +  +LR S +  + +   +S+G VRL S  D    PLIDP Y S   D  +  + W T + +++ + + K     E+LPG    YG     F  + +  C  +FHPVGTCRM  G E            SVV A  LRVHG  GLR+AD SVAP IP+ PTQAM  MIG +AA + L  R  K
Sbjct:   34 CDYLVVGGGCSSCSLVACLAAAGKSVVVVEAGGAEPWE-RKVVDDPQSWFAAASHGRPVSRLYRTVPQLAVLSKLMPAFRGEGFGGTGNVNACIWCRGRREDYQQ-WPWKLEDIEKGFEFAERSLRVKRVPAKGSGAAMCAMMRE-------------------SGFKTCKEELWAEDGVAEGLYATVQG--EAGTRTSAWKELVSPWIAKGRVKVYPHCNVSRVIFD---------------------------------RKKVVLCAGAFDSPKILLLSGIGDPEELEEKTVPPLINNPNVGRHLQDHLILVAAFAARKPLRSCDTNDIGTHGMCHVTIRRESRRRHGQILFKDSWNAWEVLPELCSGMV------------------LGQNIGSEVISRV-------------VLIVCKLVFYIPGIKWMLRQSLTAGICMMDPRSRGRVRLRSN-DPRDPPLIDPRYLSEESDLVLLHDLWSTFK-SVKTSPSAKEWILAELLPGAPLMYGESMSWFKWWVKLACSSYFHPVGTCRMPSGKEWETRQSNELSSVSVVDAF-LRVHGTVGLRIADCSVAPRIPSAPTQAMAYMIGYQAAQLMLGTRTPK 555          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: A0A1G8EK17_9MICO (Choline dehydrogenase n=1 Tax=Agrococcus jejuensis TaxID=399736 RepID=A0A1G8EK17_9MICO)

HSP 1 Score: 229 bits (583), Expect = 2.110e-61
Identity = 195/615 (31.71%), Postives = 268/615 (43.58%), Query Frame = 2
Query:  143 DFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWTWEL-GDIEASFESIEAELTLEEQHTTGTIM-------PSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEA--DFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAKDQIQARM 1957
            +++++GAGS+G  +A RLV AG  V +VE GP D   +   V  P  W     S      A +T PQ  LG R L  PRGR  GG+S++N  +Y RG + DY    TWE  G +  S++ +       E H  G             ER+ +E+    ++     A         DF      +E L       TTTR G R SAW AFV+P+   P L V  DA+VSRV++E GRAVGVE V  G                +A+  AE+ +  GA  SP +L+ SG+GP  HL D G+ V AD+P VGENL DHLL+  +  SK P+     +  E   +  +   C  P+P                                  I V Y   GG A   G  L   + RP                                          S+GT+RLAS  D +  PL+DP  F+   D +   +    VRR +   +    +   E  PG      +D  +F   A+A    + H VGTCRMG   +D  V    LRV G++GLRVADASV P +P+  T A  +MIG++A+ + L    A    +AR+
Sbjct:    7 EYVVIGAGSAGSAIARRLVDAGHSVHVVEAGPVD---VDPDVHSPQGWPALLMSPNDW--AVMTTPQQHLGGRVLYWPRGRVLGGSSSLNGMIYMRGDRSDYD---TWEASGAVGWSWDEVLPYFRRSEDHVDGADAFHGEGGPLRVERIPDELRHPVAAAFVDAAVEAGIERTDDFN-----RERLDGAGFNHTTTRDGRRASAWQAFVAPILGSPLLTVTTDALVSRVLVEDGRAVGVEYVVDGV-------------THVARATAEVVVSAGAIGSPAILLRSGIGPAAHLGDLGITVVADVPGVGENLHDHLLVSVLYSSKEPVAAPRWNLLESQLYARSSV-CEGPAP----------------------------DLQPLCIHVPYPTDGGAAPEQGYTLAAGIVRP-----------------------------------------HSRGTIRLASA-DPTVAPLVDPNVFADERDVEAMVDAIELVRR-VGAQDAFAELRDAEFAPGPDVTSRDDLRAF---ARATVGTYHHQVGTCRMGG--DDLAVVDPELRVRGVAGLRVADASVMPMVPSANTNAPSIMIGEKASDLLLAAAGAGADAEARL 518          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: A0A316GGZ5_9RHOB (Choline dehydrogenase n=1 Tax=Roseicyclus mahoneyensis TaxID=164332 RepID=A0A316GGZ5_9RHOB)

HSP 1 Score: 219 bits (557), Expect = 5.280e-58
Identity = 193/601 (32.11%), Postives = 276/601 (45.92%), Query Frame = 2
Query:  143 DFLIVGAGSSGCVLASRLVR-AGLKVLLVEKGPADAATL---SKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWTWELGDIEASFESIEAELTLEEQHTTGT-IMPSCERMLEEIGVRRSSPPSSVAESTT-----TTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVL---YFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAA 1906
            DF+IVGAG++GCVLA+RLV   G +V L+E G  D A     + + +  + W  C       + AF T+PQAG+G R +   +GRG GG +++N  +Y RG  KD+ + W  ++G    +++ +       E +  G          L  I + + S  ++   + T     +    DF      +E    Y   R TT   ER S   AF+ P+   P L +  DA VSR++IEGGRAVGVE V        GGR   +R  R      E+ +  GAF SP+LLMLSG+GP +HL   G+ V +D+P VG+NL DHLLLP                  C+ A   S  L +P                      +S+ +  F    I      Y DGG      G  L  ++A+P                                         +S+GTVRLAS  D   +P++DPAY + P D +V   G R + R +   +    +   E+ PG   +    +ES + + +A+    +HPVGTCRMG   + + V    LRV G+SGLRVADAS  P I +  T A  +MIGD+AA
Sbjct:    5 DFIIVGAGAAGCVLANRLVSLGGARVALIEAGGRDDAPTIHATDIGSMTSMWGPC-----DQNWAFQTVPQAGMGGRRVDIAQGRGLGGGTSINAMMYVRGNPKDF-DRWA-QMGARGWAYKDVLPYFMRGESYDGGDDAYRGRSGGLRVIDMDKKSAAAAAFMAATRDLGHSRAEGDFNGAQH-EENAFLYQSTRLTT--SERCSTATAFLDPLRNDPRLILVTDAQVSRIVIEGGRAVGVEYVT-------GGRREEIRASR------EVILTAGAFLSPQLLMLSGIGPADHLRAHGINVVSDLPGVGQNLHDHLLLPV-----------------CYRA---SLVLDAPQLLSEAGIFLYTGVSDRS----TSSPDLQFFFGPIQFADPQYVDGGP-----GFTLVPILAQP-----------------------------------------RSRGTVRLASA-DPMQKPVVDPAYLTDPRDVEVLLRGLR-IARDLAADKAFDGMRDKELAPG---SDATSEESLVAYIRASASTVWHPVGTCRMGDPTDATTVLDSALRVRGVSGLRVADASAMPMITSGNTNAAAIMIGDKAA 507          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: A0A4D4JEL6_9PSEU (Choline dehydrogenase n=2 Tax=Gandjariella thermophila TaxID=1931992 RepID=A0A4D4JEL6_9PSEU)

HSP 1 Score: 218 bits (554), Expect = 2.380e-57
Identity = 194/622 (31.19%), Postives = 283/622 (45.50%), Query Frame = 2
Query:  137 DCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWT------WELGDIEASFESIE----AELTLE----------EQHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVE-SGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWV---AGWVTPVCRILRGSRSMVMAITTI---KSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALR 1921
            + D+++VGAGS+GC++A RL  +G +V+L+E GP D +   ++    +         K     + ++PQ     R +P  RG+  GG+S+VN  ++ RG + +Y + W       W   ++  SF+ +E     E  L           ++H T       E M E +GV R+   +  A+                 EG+    +      GG R S    ++S   T PNLRV   A V+RV+ +G RAVGVE+VE SGP           R LR A+   E+ +  G F SP++LMLSG+GP +HL D G+ V AD+P VG+NL DHL +P   ++           G+ H  T                               +  + G  + AV G  +F G  + +       M   R         + +L L W         PV R    +R  V  +TT+   KS+GTVRLAS  D +A PLIDPAY + P+D +   +G + VR  +        V G E+ PG       DD++  +         +HPVGTCRMG  V++  V    LRV G+ GLRVADAS+ P I    T A  MMIG+  A +  R
Sbjct:    4 EADYIVVGAGSAGCIVARRLAESGARVVLLEAGPKDRSWFVRVPGMISIVHSVPQIKKRFDWGYYSVPQQHAMGRRIPMTRGKVLGGSSSVNGMVFVRGHRGNYDD-WADAGCKGWSYDEVLPSFKRLEDWEDGENDLRGAGGPIAVRRQKHLTEPAHALFEAMAETLGVPRNDDYNGAAQ-----------------EGVSTVQMSA---HGGRRFSTSHGYLSDRQT-PNLRVVVGATVTRVVFDGARAVGVEIVERSGP-----------RVLRAAR---EVVLSAGVFGSPQILMLSGIGPADHLRDNGIDVRADLP-VGDNLHDHLFVPMTFLAP----------GAVHRGT------------------------------AAHMLGGILAEAVRGDTWF-GSTVFDT------MTFFRTDRANGRPDLQILTLPWSYPSPNQDAPV-RHTVDTRPAVTVMTTLIYPKSRGTVRLASA-DPTAAPLIDPAYLADPDDARFLIDGMKVVREVMASRRLAGVVTG-ELHPGPACP---DDDALARELPNRIHSVYHPVGTCRMG--VDERAVVDPELRVRGVEGLRVADASIMPSITGGNTNAPAMMIGEHCAQLMRR 533          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: A0A158CA93_9BURK (GMC family oxidoreductase n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A158CA93_9BURK)

HSP 1 Score: 216 bits (549), Expect = 1.340e-56
Identity = 190/605 (31.40%), Postives = 282/605 (46.61%), Query Frame = 2
Query:  134 VDCDFLIVGAGSSGCVLASRLVRAG-LKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWTWELGDIEASFESIEAELTLEEQHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGL------GCYSLK-----RTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAI 1912
            +D DF+++GAGS+GCV A+RLVR    KVLL+E GP      S L+  PA   +  F+G    + + + PQA LG R +  P+G   GG S+VN   Y RG + DY E W    GD   S+E +      +E +         +R+  E     +  P  V++     ++AD       ++GL         +L+     +TTT+GG+R SA  AF+  V + P L +   A V R+I EG RAVGVE    G          RV+    A+ ++E+ +C GAF +PKLLMLSG+GP  HL++ G+ V  D P VGENLQDH      N++   M     T G  HG  YF                              + +NG      +  L F  G +A N  + +  +  R       +++     C    W  P         +++  +   +S+GTVRL S  D +   L++P +    ED +   E  R +R  I   E   ++   E+ PG  Y     D+   ++ +      +HPVGTCRMG+  +   V   +L+V G++GLRV DAS+ P I ++ T A  M + DRA  I
Sbjct:    1 MDYDFIVIGAGSAGCVTANRLVREWRAKVLLLEAGP---PANSALIRMPAGTFKMLFNGSPFIKRYASAPQASLGGRTVSIPQGNVVGGGSSVNAMAYTRGSRTDY-ERWVAATGDPGWSWEGLLPYFRRQEGN---------QRLDNE--AHGADGPLKVSDPLYKADVADRFVRAMQRQGLPFATDFNAGTLRGVGYMQTTTQGGQRCSAVNAFLGQVMSDPLLSLITHASVHRIIFEGERAVGVEYTAGG---------ARVQ----ARASSEVIVCAGAFATPKLLMLSGIGPATHLQEHGLEVRVDSPGVGENLQDH------NVAVVSMT----THGQ-HG--YFG-----------------------EDRGARALLNG------LQYLAFRSGPIASNGAETMAFVNLRIPDGEPDLQLY----CVGVMWPDPEAPQPSYGMTLMANLVRPRSRGTVRLRSA-DPTDDALVNPNWLHDDEDTKRLVEAIRYMRE-IAANEPFSSIVKAEVGPGLQYQ---SDDELAQYIRRTTESNYHPVGTCRMGRPDDPLSVLTPDLKVKGVTGLRVFDASMMPSIISSNTNATVMAVADRAVDI 526          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: A0A7V4CWN6_9BACT (Choline dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V4CWN6_9BACT)

HSP 1 Score: 214 bits (546), Expect = 2.110e-56
Identity = 206/613 (33.61%), Postives = 276/613 (45.02%), Query Frame = 2
Query:  143 DFLIVGAGSSGCVLASRLV-RAGLKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWT------WELGDIEASFESIE-AELTLEEQHTTG---------TIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVA-GWVTPV-CRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRD 1924
            D+++VGAGS+GCVLA+RL  R G +VLL+E G  D A   K +  PA + R  F G     A+ T PQ  L  R L  PRG+  GG+S++N  +Y RG + DY + W       W   +I   F+  E  E    E H  G         T+ P   R   E G     P +S           DF   +  ++G+G Y +   T + G R SA AA+++P     NL V+  A VSRVI+EGGRA GVE + +G R             R A+   E+ +C GA  SP++LMLSGVGP   L   G+ V  D+P VGENLQDHL +P V+    P V  D T G       +  A   P                                            L  N+ +    +  RPG     +++      ++  G+V P  C    G   +       +S+G V LAS +D +A PLIDP Y   P D  V  +G    RR +          G EI PG        D +   FA+      +HPVGTCRMG     +VV A  LRV G++GLRVADASV P I    T A  +MI ++AA +   D
Sbjct:    6 DYIVVGAGSAGCVLAARLSERGGARVLLLEAGGPDRA---KEIRIPAAFARL-FKGPH-DWAYHTEPQPRLAGRRLFWPRGKVLGGSSSINAMIYVRGNRLDYDD-WAALGNKGWSFDEIVPYFKRAEHCERGASELHGAGGPLNVADLRTVNP-LSRAFVEAGAAIGLPVNS-----------DFNGAS--QDGVGFYQV---TQKRGARWSAAAAYLAPARRRANLEVRTAAHVSRVIVEGGRATGVEYLVAGGR-------------RTARAEREVILCAGAVNSPQILMLSGVGPAGRLRAAGIDVVVDLPGVGENLQDHLAVPLVHACTQP-VTLDVT-GRPGDLVRYVVARSGP--------------------------------------------LTSNVAEAGGFVRTRPGLPAPDLQLHFGPAYFMEHGFVRPEGCGFTLGPTLVAP-----RSRGRVTLAS-SDPTAAPLIDPNYVEDPRDLAVLVQGLLLARRLVAAGPFDP-YRGPEIWPGPDVR---SDAALADFARLRAETLYHPVGTCRMGHD-RLAVVDA-RLRVRGVTGLRVADASVMPVIVRGNTNAPTIMIAEKAADLIRED 524          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: A0A1H0TWD1_9PSEU (Choline dehydrogenase n=2 Tax=Actinokineospora TaxID=39845 RepID=A0A1H0TWD1_9PSEU)

HSP 1 Score: 214 bits (546), Expect = 2.450e-56
Identity = 196/622 (31.51%), Postives = 286/622 (45.98%), Query Frame = 2
Query:  143 DFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADAATLSKLVTRP---AEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWT------WELGDIEASFESIE---------------AELTLEEQHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGAT--YFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVT---PVCRILRGSRSMVMAITTI--KSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFG---TEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAA 1906
            D+++VGAGS+GC +A RL  +G +V+L+E GP D    S+LV +P   A +       K L  ++ ++PQA   +R +P  RGR  GG+S++N  ++ RG +++Y + W       W   D+  SF+ +E                ++T  +Q  T       E M E  GV+++                D+      +EG    S+ +    GG R S+   ++     +PNLRV+    VSRV+IEGGRA GVE++    R              +   + E+ +  G F SP+LLMLSGVGP EHL DKG+ V AD+P VG+NL DH+ +P   ++K             H  T  YF+                                 G    AV G  +  G  + E++G        R    GA   I +L L W   +     P+   +    ++ +  T I  +S+GT+RLAS  D +A PLIDPAY +   D ++  E  + VR    E    K + G    E+ PG  Y    DD + ++         +HPVGTCRMG  V++  V    LRV GI GLRVADAS+ P I    T A  MMIG+  A
Sbjct:    5 DYVVVGAGSAGCAVARRLAESGAEVVLLEAGPVDK---SRLVRKPGMIAVFHNIPQLKKRLDWSYYSVPQASALDRRIPQTRGRVLGGSSSINGMIFVRGNRRNYDD-WAADGCAGWGFDDVLPSFKRMEDWADGGNDLRGAGGPIKVT-RQQGMTAASEAFIEAMSETAGVKKND---------------DYNGEE--QEGA---SVVQQNIDGGLRYSSSIGYLG--AGLPNLRVRTGVTVSRVVIEGGRATGVEILTKSGR-------------EVIHASREVVLSAGVFGSPQLLMLSGVGPAEHLRDKGIEVRADLP-VGDNLHDHMFVPMTYLTKSAQ----------HRGTGPYFA--------------------------------KGVLKEAVSGGTWV-GRTVFESVG------FVRSSRAGAVPDIQLLALPWSYPFPNQDAPIRHNVDPRPALTVMATLIYPESRGTMRLASA-DPTAAPLIDPAYLTARRDSELLLESMKLVR----EIMANKVIAGDVTAELSPGPDYA---DDAALMRELPNRATTVYHPVGTCRMG--VDERAVVDPQLRVRGIEGLRVADASIMPSIVGGNTNAPAMMIGEHCA 526          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: UPI0019D3DAD4 (choline dehydrogenase n=3 Tax=Bowmanella TaxID=366580 RepID=UPI0019D3DAD4)

HSP 1 Score: 213 bits (543), Expect = 6.730e-56
Identity = 195/599 (32.55%), Postives = 273/599 (45.58%), Query Frame = 2
Query:  143 DFLIVGAGSSGCVLASRLVR-AGLKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWT------WELGDIEASFESIEAELTLEE--QHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSLKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVSSAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAI 1912
            DF++VGAGS+G  LA+RL      KV L+E G  D+  L  +    A  L C F  +G++  + T PQ  L NR L  PRG+  GG+S+VN   Y RG K+DY +HW       W    +   F+  E +   E+      G +  S  R +  +    S        +T  + + DF      +EG+G Y +   T + G+R S+  A++S      NL +    +V RV++E GRAVGVE  + G R          RQ+   K   E+ +  GA  SP+LLMLSG+GP  HLE  G+ V  D P VGENLQDHL           +V+    + + +G      ALP                         S   G  SS +       GG  + +L   L  L     F+ A ++     L W  G+   +C +              KS+GTVRL +  D  A PL+DP Y SH +DRQ   +G +  R+ +R+    K     E LPG        DE+ L F +      +HPVGTCRMG       V    L+V G+ GLRV DASV P +    T A  +MI ++AAA+
Sbjct:    8 DFIVVGAGSAGAALAARLSENPAWKVCLLEAGKPDSNPLIHIPFGLA--LLCRF--RGINWNYTTQPQTELNNRSLYWPRGKTLGGSSSVNAMCYIRGAKEDY-DHWQALGAEGWNWQSVLPYFKKAEDQQRGEDAWHGVGGPLTVSDLRYVSAL----SQDFVQAGVATGLSELTDFNRDM--REGVGAYQV---TQQQGQRCSSAKAYLSQAKIRSNLTILTSGLVRRVLLEQGRAVGVEFEQRGQR----------RQIYAEK---EVLLSAGAINSPQLLMLSGIGPAAHLESLGIKVEVDCPGVGENLQDHL---------DAIVQCRTNKIAGYGVA--PGALPQ---------------YVQGLWQYFSGHRGLMSSNIAEA----GGFASSSLANGLPDLQMH--FIPAILQDHGRHLAWGYGYGLHICYLYP------------KSRGTVRLQTA-DPEAPPLLDPRYLSHEDDRQAMLDGVKLARQILRQAAFEKYQ-PQEWLPGAAVE---SDEALLDFIKDKAETIYHPVGTCRMGDPQSPLTVVCPELKVKGVQGLRVVDASVMPTLIGGNTNAPTIMIAEKAAAL 530          
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Match: B2JRN0_PARP8 (Glucose-methanol-choline oxidoreductase n=3 Tax=Paraburkholderia TaxID=1822464 RepID=B2JRN0_PARP8)

HSP 1 Score: 213 bits (543), Expect = 8.500e-56
Identity = 191/611 (31.26%), Postives = 269/611 (44.03%), Query Frame = 2
Query:  134 VDCDFLIVGAGSSGCVLASRLVRAG-LKVLLVEKGPADAATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGGGTSNVNVALYQRGRKKDYKEHWTWELGDIEASFESIEAELTLEEQHTTGTIMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYS------------LKRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEVVESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPREHLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSC--HGATYFSCALPSPXXXXXXXXXXXXXXXXXXXXXVS---SAINGSFSSAVIGVLYFDGGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGSRSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRTVRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVGTCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAI 1912
            +D DF++VGAGS+GCV A+RLVR    KVLL+E GP   +  S L+  PA   +  F+G    + + + PQA LG R +  P+G   GG S+VN   Y RG + DY E W    GD   S+  +      +E +         +R   E     S  P  V++   T  +AD    T  + G+  YS              +TTT  G+R SA  AF++P+   P L +  DAVV RV+ EG  AVGVE    G             +L  A+   E+ +C GAF +PKLLMLSG+GP  HL+++G+ V  D P VGENLQDH      N++   M     T G     G      AL +                      V+    A         +GV++ D  G     G  L   + RP                                         +S+GTVRL S    S   ++ P +     DR+   +  R +RR +  +E   ++   E+ PG    +   D   L++ +      +HPVGTCRMG+  +   V   +LRV G+SGLRV DAS+ PHI ++ T A  M + DRA  I
Sbjct:    1 MDYDFIVVGAGSAGCVTANRLVREWQAKVLLIEAGP---SAKSALIRMPAGTFKMLFNGSPFIKRYASSPQASLGERVVSIPQGNVVGGGSSVNAMAYTRGSRADY-ERWFAATGDPGWSWNGLLPYFKKQEGN---------QRFDNES--HGSDGPLKVSDPRYTVEVADRFVRTMQRHGIP-YSPDFNAGRLQGVGYMQTTTYQGQRCSAADAFLTPILDHPGLTLVTDAVVERVLFEGDAAVGVEYRVKG-------------KLGRARTLNEVVLCAGAFATPKLLMLSGIGPAAHLKEQGLKVRVDSPGVGENLQDH------NVAVVSMT----TRGQYGYFGEDRGFRALRNALRYLAFRSGPIASNGAETMAFVNLGDPAAEPDLQLYCVGVMWPDPQGPKPTFGMTLMANLVRP-----------------------------------------RSRGTVRLRSAVP-SDDAVVSPNWLHDVADRERLVQALRYLRR-LASSEPLASIVHEEVGPGP---HVQSDGELLEYLKRTTDSNYHPVGTCRMGREDDSMSVLTPDLRVKGVSGLRVFDASMMPHIISSNTNATVMAVADRAVDI 526          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig834.17345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2G8_ECTSI8.840e-28269.92Glucose-methanol-choline oxidoreductase n=2 Tax=Ec... [more]
L1JH16_GUITC4.130e-6730.72GMC_OxRdtase_N domain-containing protein n=1 Tax=G... [more]
A0A1G8EK17_9MICO2.110e-6131.71Choline dehydrogenase n=1 Tax=Agrococcus jejuensis... [more]
A0A316GGZ5_9RHOB5.280e-5832.11Choline dehydrogenase n=1 Tax=Roseicyclus mahoneye... [more]
A0A4D4JEL6_9PSEU2.380e-5731.19Choline dehydrogenase n=2 Tax=Gandjariella thermop... [more]
A0A158CA93_9BURK1.340e-5631.40GMC family oxidoreductase n=3 Tax=Burkholderiaceae... [more]
A0A7V4CWN6_9BACT2.110e-5633.61Choline dehydrogenase n=1 Tax=Candidatus Rokubacte... [more]
A0A1H0TWD1_9PSEU2.450e-5631.51Choline dehydrogenase n=2 Tax=Actinokineospora Tax... [more]
UPI0019D3DAD46.730e-5632.55choline dehydrogenase n=3 Tax=Bowmanella TaxID=366... [more]
B2JRN0_PARP88.500e-5631.26Glucose-methanol-choline oxidoreductase n=3 Tax=Pa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig834contigL-elsbetiae_contig834:3109..8936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score814.3
Seed ortholog evalue4e-233
Seed eggNOG ortholog2880.D7G2G8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.flavin adenine dinucleotide binding
EggNOG OGsCOG2303@1,KOG1238@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionGlucose-methanol-choline oxidoreductase
Ec32 orthologEc-00_005920.1
Exons7
Model size3210
Cds size1893
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816916.5609775-UTR-L-elsbetiae_contig834:3108..43311622816916.5609775-UTR-L-elsbetiae_contig834:3108..4331Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig834 3109..4331 -
1691683910.1582408-UTR-L-elsbetiae_contig834:3108..43311691683910.1582408-UTR-L-elsbetiae_contig834:3108..4331Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig834 3109..4331 -
1622816916.656738-UTR-L-elsbetiae_contig834:8842..89361622816916.656738-UTR-L-elsbetiae_contig834:8842..8936Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig834 8843..8936 -
1691683910.2675486-UTR-L-elsbetiae_contig834:8842..89361691683910.2675486-UTR-L-elsbetiae_contig834:8842..8936Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig834 8843..8936 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816916.5713701-CDS-L-elsbetiae_contig834:4331..43701622816916.5713701-CDS-L-elsbetiae_contig834:4331..4370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 4332..4370 -
1691683910.1744149-CDS-L-elsbetiae_contig834:4331..43701691683910.1744149-CDS-L-elsbetiae_contig834:4331..4370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 4332..4370 -
1622816916.581487-CDS-L-elsbetiae_contig834:4674..48221622816916.581487-CDS-L-elsbetiae_contig834:4674..4822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 4675..4822 -
1691683910.1836991-CDS-L-elsbetiae_contig834:4674..48221691683910.1836991-CDS-L-elsbetiae_contig834:4674..4822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 4675..4822 -
1622816916.5927129-CDS-L-elsbetiae_contig834:5483..56181622816916.5927129-CDS-L-elsbetiae_contig834:5483..5618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 5484..5618 -
1691683910.1944685-CDS-L-elsbetiae_contig834:5483..56181691683910.1944685-CDS-L-elsbetiae_contig834:5483..5618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 5484..5618 -
1622816916.6045969-CDS-L-elsbetiae_contig834:6112..67381622816916.6045969-CDS-L-elsbetiae_contig834:6112..6738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 6113..6738 -
1691683910.2138438-CDS-L-elsbetiae_contig834:6112..67381691683910.2138438-CDS-L-elsbetiae_contig834:6112..6738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 6113..6738 -
1622816916.6154761-CDS-L-elsbetiae_contig834:7096..76511622816916.6154761-CDS-L-elsbetiae_contig834:7096..7651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 7097..7651 -
1691683910.2230067-CDS-L-elsbetiae_contig834:7096..76511691683910.2230067-CDS-L-elsbetiae_contig834:7096..7651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 7097..7651 -
1622816916.6276672-CDS-L-elsbetiae_contig834:8192..82411622816916.6276672-CDS-L-elsbetiae_contig834:8192..8241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 8193..8241 -
1691683910.2395244-CDS-L-elsbetiae_contig834:8192..82411691683910.2395244-CDS-L-elsbetiae_contig834:8192..8241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 8193..8241 -
1622816916.6436539-CDS-L-elsbetiae_contig834:8501..88421622816916.6436539-CDS-L-elsbetiae_contig834:8501..8842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 8502..8842 -
1691683910.2520475-CDS-L-elsbetiae_contig834:8501..88421691683910.2520475-CDS-L-elsbetiae_contig834:8501..8842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig834 8502..8842 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig834.17345.1prot_L-elsbetiae_contig834.17345.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig834 4332..8842 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig834.17345.1

>prot_L-elsbetiae_contig834.17345.1 ID=prot_L-elsbetiae_contig834.17345.1|Name=mRNA_L-elsbetiae_contig834.17345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=631bp
MAHPSPTSPTVDTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPAD
AATLSKLVTRPAEWLRCAFSGKGLSEAFITIPQAGLGNRHLPAPRGRGGG
GTSNVNVALYQRGRKKDYKEHWTWELGDIEASFESIEAELTLEEQHTTGT
IMPSCERMLEEIGVRRSSPPSSVAESTTTTNIADFTEPTWTKEGLGCYSL
KRTTTRGGERQSAWAAFVSPVTTMPNLRVKDDAVVSRVIIEGGRAVGVEV
VESGPRRWWGGRGTRVRQLRLAKENAEIFICCGAFRSPKLLMLSGVGPRE
HLEDKGVAVTADMPHVGENLQDHLLLPTVNISKPPMVEADFTEGSCHGAT
YFSCALPSPPPPPLPPPPPPPSEDSSCSTTVSSAINGSFSSAVIGVLYFD
GGGLAENLGQNLCMLVARPGFLGAAVRIAVLVLCWVAGWVTPVCRILRGS
RSMVMAITTIKSKGTVRLASGTDASARPLIDPAYFSHPEDRQVACEGWRT
VRRAIRETETGKAVFGTEILPGKMYNYGNDDESFLKFAQANCLPFFHPVG
TCRMGQGVEDSVVSADNLRVHGISGLRVADASVAPHIPATPTQAMCMMIG
DRAAAIALRDRFAKDQIQARMLETVTSSVD*
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mRNA from alignment at L-elsbetiae_contig834:3109..8936-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig834.17345.1 ID=mRNA_L-elsbetiae_contig834.17345.1|Name=mRNA_L-elsbetiae_contig834.17345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5828bp|location=Sequence derived from alignment at L-elsbetiae_contig834:3109..8936- (Laminarionema elsbetiae ELsaHSoW15)
GGTACGATAGAGGGAGCTGGGAGTTTCATTTCTTTGATTTACTTTTCAAG AAAAAGATACGCATAAAGTGGGTCACGTTGAACTGAGCGCGATCATGGCG CACCCAAGCCCTACAAGCCCTACCGTGGACACGGTCGACTGCGACTTCCT CATCGTTGGTGCAGGATCAAGCGGCTGCGTGCTGGCCTCCCGGCTCGTTC GGGCAGGCCTCAAGGTCCTGCTAGTTGAAAAGGGGCCGGCGGACGCCGCG ACGCTGAGCAAGCTCGTGACTCGCCCCGCAGAGTGGTTGCGCTGTGCATT CAGCGGGAAAGGTCTCTCGGAGGCCTTCATCACCATTCCTCAGGCCGGCC TAGGCAACCGCCACCTTCCGGCACCCAGGGGCCGAGGGGGTGGCGGGACA AGCAACGTCAACGTTGCTTTGTACCAACGGGGAAGGTACGCCATTGGCTC TAAGGAGTAGCAGCAGTGGGTGGTAAATAGCGGCGTGTGGGGCTTGAGAG GGAAGGGGTCAGACTCATGGTGCGCTTGCCTCCTCTGGGTATTTTCCGGC ATTCCATCTGGCACACACAGCAGCAGTGTTCATAGTCGCGTGTGGAAAGA TATGCATACCCACGGTGGTGCTTCTGCTGTGTGGGTCACGGCTACATAGG CTATAACGCACCATTCTGGACTTGTTGGGTACGCGCGTTGTACAGGAAAA AGGACTACAAAGAGCACTGGACTTGGGAACTCGGGGATATCGAGGTGGGC GCGTCGGCACACATTCCTCGCCTCACAGACACCGGTATTGCACCCTCCTG ACAAAGCGGCACGACTAGCCCTTTAGTATCCGAGATAAACTATGAGTCTC TGGCCAAGTTCCTGCGCAACTCAGATGACACACACGATGCGCTTGAGGAC GTTTTCCGGCTGGGCGTTCTGACGTACGTGTCCCGCACGGAGCAGTGGGC ACCATCCTCCCGCAAGCACAGAATATTTTCCCTCGTGGAGCAAACTGGTC GAGAATTCTGTGAGATGTTCACAAGCACAGGTTTGATCGTGTAGGGTGTC GAGTATAGCAGCGTGTCTCCCACCCTCACCCCTCTCTTTCTGTAAATGTT GGCACTCTAACACCGCGAATTCAATCAGCATGAGACGTGTTGGAGGACAA CTGCTGTACAAAATGTACGCTACCGTAACAACTGTTGTTGAACTTCTGCC GTGTTGGATTTCTCCGCACATATTCTCTACTTGATGGCGCTGAAACACAC GTCTCCCCTGTATCGCCATTCCGATTCACTGGCAGGCTAGCTTTGAGTCC ATCGAGGCCGAGCTGACTCTAGAAGAACAGCACACCACCGGCACCATCAT GCCGTCATGCGAGCGCATGCTCGAAGAGATAGGAGTCAGGCGCTCCTCCC CGCCGTCGTCCGTGGCAGAGAGCACCACCACCACGAACATAGCTGACTTC ACCGAGCCGACTTGGACGAAGGAAGGTCTCGGCTGCTACTCGCTGAAGCG CACTACGACAAGGGGCGGCGAGAGGCAGTCGGCCTGGGCGGCCTTCGTCA GCCCCGTCACAACCATGCCCAACCTCCGAGTCAAGGACGACGCCGTAGTG TCCCGTGTCATAATCGAGGGGGGGCGCGCGGTCGGAGTGGAGGTCGTGGA GTCCGGACCGAGACGGTGGTGGGGCGGCAGGGGGACGCGGGTACGGCAAC TGCGGTTAGCGAAGGAAAATGCGGAGATCTTCATTTGCTGCGGGGCGTTC AGGTCTCCGAAGCTTCTCATGCTCTCCGGCGTGGGACCAAGAGAGCACCT GGAGGACAAGGGGGTGGCGGTTACGGCGGACATGCCCCACGTAAGCACGA TAGGGAGTTTGCAAGGTTGTTGTACGTGTGCTTGGTTGAGAGAGACAAGT GTCTTGGCTCCAACTCTTCTTGGCCCGATCCGCAAGATGGCGCGAGTTGC GCCGGTACTGAGAGACCAAGGGACCACTGGGTCTCTCTGCTTGTTTTTGT AGATTTTGTTTTTGGGAGTGCAACACCTTGGGCTTTTGCTCCAAGACCAC TTGAAACGATTACCCACATGTCGTGAACGCAACACTCTGCGCCCAAACGA TCGGGGCGAATTCTTTCGACTAAATCTGCGACCCCTCAACATCTTGGTTT TCTCCCGCTCTCTCCCTCGCGCCCGGGCTGAATTTCGCTCCTACGCAGGT GGGGGAAAACCTCCAGGATCACTTGCTTTTACCTACGGTGAATATCAGCA AGCCACCAATGGTAGAGGCCGACTTCACCGAGGGGTCGTGTCACGGCGCG ACCTACTTCTCTTGTGCATTGCCCTCCCCGCCGCCACCGCCGCTACCGCC ACCACCACCACCACCTTCTGAAGATTCCTCTTGCTCCACCACCGTGTCCA GTGCTATCAACGGCTCCTTTTCGTCGGCTGTTATTGGGGTTCTTTACTTC GACGGCGGTGGCCTTGCGGAAAACCTCGGCCAAAACCTCTGCATGCTCGT CGCGCGGCCGGGATTCCTGGGCGCGGCCGTGCGCATTGCCGTGTTGGTGC TGTGCTGGGTCGCCGGCTGGGTGACCCCGGTATGCCGGATCCTCCGCGGT TCCCGCAGCATGGTGATGGCCATCACGACAATCAAGAGTAAGGGCACGGT GCGCCTCGCTTCCGGAACAGATGCCTCGGCTCGGCCGCTGATCGACCCGG CGTACTTCTCTCACCCGGAGGACCGGCAGGTGGCGTGCGAGGGATGGCGC ACAGTTCGGCGTGCGATTAGAGAGACGGAAACCGGCAAGGCTGTTTTTGG CACCGAGATCTTGCCAGGAAAAATGTGCGTGCTTTGTTTCTCCGGAAATA AATAGTTGGGGACTGCGCAGGTTTTTTCCCCGCAACCTGCTGTTAAAGTC TGGAGGCTGTGAAGGTGACTTTGTTTGGACGGGTTTGGTGTTTTGAGTTG TTTGCACTGATGTTTTGTTGTCGACCTTGCTCTCGGTGCCTTGGCGGTTG CCTTTGCATCTCTTTCTGTCATCTGGACAGTATCATATCTCGCTTGCTTT GAATCGTCCTCCGTGCTTGTTCAACGCCTGCACCTCGCCGTGTCACTGAT TTGTCACTTGGGGCTGAGTTGTCGCACCCGCGAGTAGGGCGAGCGTTCGC TCGTAGACCGAAACGCAGAGGTACAAAGAACATATTTGACGCACCTTGCA CCGTTTTCTGATCCTCCATACGCTACTCCATGGCCTCAGCAGGTGGACCC AAATCTTGGAGGCAAGCTGTGTCTGATTCGTTTGCGTTGTGTTTTCTGGT GGTTGTGATCCCAACAAGGTACAACTACGGCAACGACGACGAAAGCTTTT TAAAGTTCGCCCAAGCTAACTGCCTGCCCTTCTTCCACCCTGTCGGCACC TGCCGGATGGGTCAAGGGGTGGAAGACTCGGTGGTGTCTGCGGACAACCT CAGGTAAGCTAGATCGTTTCGAGTATTAAAGCAGAGGCAATGAAAGGCGA GGTGGCGTGTGTGGGTGGGTGGACTGGCTAGGGTCCAGAGTGATTGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAAAGATAAAGAATCGGGCGGGACT GGGAAGATGAATAGCGGGCCGCGTCTCAGTATTGTGTATTGCGGTAATTC TACGGCTTGATCGAATCCATTGCCGACTGTTGTTTGCGGCGGCGGGGCTC GCGCGCGGTCTTGCCAGTTACTGTGCACGGTGTCCAGATTCGTTGAGCAG CAGCTACGCAACGGTTTGGTTTTACCAGATGCGTGGCAGTCCACTTCTTG TCCCGCAAGATATTACGTTGGCCCGTACAGCGATAAACAGTATCTCTTTT TTTTTAAATGTCTACTATTGTCAGCGGCCTACGTCCAATCTTTTTGTATG GCGTCGGTTTGGTCCGAGTAGCGCAGCACACTAATATGTGACGCGGGTGT GCTATGTTGTTATTTCGTGAAGTCGTGTCCGCGTCATTATGGGTCGTGTC GGGATGGGTCGTCTCTCATTACTTGATTATTTGTCTTTCCCTTTCCCTCT CTCTCTCTCTCATGTGTCCCTCCCTCGCTGTCTTTTTCGCCATGGTTTTT TCCTCGGTATGTAGGGTGCACGGCATTTCCGGGCTAAGGGTGGCGGATGC CTCGGTCGCGCCGCATATCCCCGCCACCCCGACGCAGGCGATGTGCATGA TGATCGGGGATCGCGCGGCCGCTATCGCTCTCAGGGACCGGTTCGCGAAA GACCAGATCCAGGTGAGCGAAGTGCCGAGGCGGTCCCTATTGTAACGAAA ACGCAAAACACACGAGTGGTGTGCAATAACTCAGTGTTGATCTCTGGCAA GGCAGGAAGGTGTTTGCACAGGGGGTTTTGGTGCATGAACACTTGGCTAA ATATGGGCTCGGGTGAGCTTGTCGTCAGTCAGGGAGGGAAAATACGTTCT AACGATGCCCGGCTCTCTTGCTAAATAGCTGGACAAAATCACTCGCTGAC TGCAGAACGAAATCCGAAATCCTGCATCTCGCCGACGTTACCGGAAACAC GCGCGAACACATGCAGGCGCGTATGCTCGAAACCGTGACCAGTTCCGTCG ACTGAATCCTTGGAGTTCTCCATTCTTCTCTCTCGAAGGGGTGGACAGTC GGCGAGCGGGAGCCGGTCAGCGAGAGTTAAGATAGAGCGACGAGGGGGGG CGGCTGGTTGCCCCCCTGATTTTACATCTGTATAAACTTCACCGCTTCAC ACTCAAACCTAAATCAGGAATTTGCGGGGGTGAGGTGCTGACTGGCCGGT GAAGAATCTGACGTGGAACTTCTGGATAGATTAGCAGGGGTATAGATATA TGTGGCGGTAGCTTGGCTTGTTTTGGATTATTGTTGTGTGTGCTCAGCAT CCGTGCGTCAACGGTGTTAGATATTACACCCCCGATATATTGTTGGGCGT GAGCGGTTGGCTTGACCGCTGGCGAAACCTGAAGGCGTAAAAAAGCACGC TCACGCCGGCCCGTCGCGTTACAAATGTTTGTAGGTTACCCTACATAGGC TGCTTCCTTAGTTTTTGTTTTTAGCTACTCCTATGCCTCTACGCATAAGT AAGGATGGCTGTAGTAGGCGACTGAAGCGTGACAACAGGATAGACGGGGT CGAGATAGACGTACCCCGCAACCCCGGCTGCGGCAGCTGCAGGGTTGGGT CGTGCGTTTGTTCGCATATTTGGGGTCGAATTTTGTGCAATGAGTGTTGT GTATATGTTCGCAACCAATGTAACTACCCCGGGCCGCGGTATATAGCACT TTCCTTGCACATATCGGGTAAATATTTGTGCGGGGATATTCTTACAGAAG GCCTAGGGTCTATAGGTTGTTACCCTAGGCTGTTTCCTTAGCTTTTGTTT TTGTGTTAGTTGTGGGTGTGCGTGTGTCACTCGCTTGATAGGGCTTGTTT CCAGAGGGAGATGCATGCAGACGGGATCGCAAATAAGCATGTGTGCCTAA ATATTTGTGCGGGGATGTTCTCAATGAACAGAACTACCCCGGAAGAGGTA GCTTAATATTAGCTGCAGGATTAGGTCGCGAGCAAGCAGAAAAAAACTGG TTAGTAATGGTGCTTACACCAACACCCTTTGAGCACAACAATCGTGCCAT GTGCGCCTGTAGCGGGAGAGACACGTCTTAAGATGTACGCCTACATCTTC TCACAAATGTTTTCCAAATGCCAGCGATCTACGTCCAACCTGTGAAAACG TGGTTCCATGGGGATTGTTGTAGGCACACCCTCCCTCACCGTCCCAGTTT TTTTCATGTACTCCAGCGTGAAGCAAGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig834:3109..8936-

>mRNA_L-elsbetiae_contig834.17345.1 ID=mRNA_L-elsbetiae_contig834.17345.1|Name=mRNA_L-elsbetiae_contig834.17345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3786bp|location=Sequence derived from alignment at L-elsbetiae_contig834:3109..8936- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCACCCAAGCCCTACAAGCCCTACCGTGGACACGGTCGACTGCGA
CTTCCTCATCGTTGGTGCAGGATCAAGCGGCTGCGTGCTGGCCTCCCGGC
TCGTTCGGGCAGGCCTCAAGGTCCTGCTAGTTGAAAAGGGGCCGGCGGAC
GCCGCGACGCTGAGCAAGCTCGTGACTCGCCCCGCAGAGTGGTTGCGCTG
TGCATTCAGCGGGAAAGGTCTCTCGGAGGCCTTCATCACCATTCCTCAGG
CCGGCCTAGGCAACCGCCACCTTCCGGCACCCAGGGGCCGAGGGGGTGGC
GGGACAAGCAACGTCAACGTTGCTTTGTACCAACGGGGAAGATGGCGCAC
CCAAGCCCTACAAGCCCTACCGTGGACACGGTCGACTGCGACTTCCTCAT
CGTTGGTGCAGGATCAAGCGGCTGCGTGCTGGCCTCCCGGCTCGTTCGGG
CAGGCCTCAAGGTCCTGCTAGTTGAAAAGGGGCCGGCGGACGCCGCGACG
CTGAGCAAGCTCGTGACTCGCCCCGCAGAGTGGTTGCGCTGTGCATTCAG
CGGGAAAGGTCTCTCGGAGGCCTTCATCACCATTCCTCAGGCCGGCCTAG
GCAACCGCCACCTTCCGGCACCCAGGGGCCGAGGGGGTGGCGGGACAAGC
AACGTCAACGTTGCTTTGTACCAACGGGGAAGGAAAAAGGACTACAAAGA
GCACTGGACTTGGGAACTCGGGGATATCGAGGAAAAAGGACTACAAAGAG
CACTGGACTTGGGAACTCGGGGATATCGAGGCTAGCTTTGAGTCCATCGA
GGCCGAGCTGACTCTAGAAGAACAGCACACCACCGGCACCATCATGCCGT
CATGCGAGCGCATGCTCGAAGAGATAGGAGTCAGGCGCTCCTCCCCGCCG
TCGTCCGTGGCAGAGAGCACCACCACCACGAACATAGCTGACTTCACCGA
GCCGACTTGGACGAAGGAAGGTCTCGGCTGCTACTCGCTGAAGCGCACTA
CGACAAGGGGCGGCGAGAGGCAGTCGGCCTGGGCGGCCTTCGTCAGCCCC
GTCACAACCATGCCCAACCTCCGAGTCAAGGACGACGCCGTAGTGTCCCG
TGTCATAATCGAGGGGGGGCGCGCGGTCGGAGTGGAGGTCGTGGAGTCCG
GACCGAGACGGTGGTGGGGCGGCAGGGGGACGCGGGTACGGCAACTGCGG
TTAGCGAAGGAAAATGCGGAGATCTTCATTTGCTGCGGGGCGTTCAGGTC
TCCGAAGCTTCTCATGCTCTCCGGCGTGGGACCAAGAGAGCACCTGGAGG
ACAAGGGGGTGGCGGTTACGGCGGACATGCCCCACGCTAGCTTTGAGTCC
ATCGAGGCCGAGCTGACTCTAGAAGAACAGCACACCACCGGCACCATCAT
GCCGTCATGCGAGCGCATGCTCGAAGAGATAGGAGTCAGGCGCTCCTCCC
CGCCGTCGTCCGTGGCAGAGAGCACCACCACCACGAACATAGCTGACTTC
ACCGAGCCGACTTGGACGAAGGAAGGTCTCGGCTGCTACTCGCTGAAGCG
CACTACGACAAGGGGCGGCGAGAGGCAGTCGGCCTGGGCGGCCTTCGTCA
GCCCCGTCACAACCATGCCCAACCTCCGAGTCAAGGACGACGCCGTAGTG
TCCCGTGTCATAATCGAGGGGGGGCGCGCGGTCGGAGTGGAGGTCGTGGA
GTCCGGACCGAGACGGTGGTGGGGCGGCAGGGGGACGCGGGTACGGCAAC
TGCGGTTAGCGAAGGAAAATGCGGAGATCTTCATTTGCTGCGGGGCGTTC
AGGTCTCCGAAGCTTCTCATGCTCTCCGGCGTGGGACCAAGAGAGCACCT
GGAGGACAAGGGGGTGGCGGTTACGGCGGACATGCCCCACGTGGGGGAAA
ACCTCCAGGATCACTTGCTTTTACCTACGGTGAATATCAGCAAGCCACCA
ATGGTAGAGGCCGACTTCACCGAGGGGTCGTGTCACGGCGCGACCTACTT
CTCTTGTGCATTGCCCTCCCCGCCGCCACCGCCGCTACCGCCACCACCAC
CACCACCTTCTGAAGATTCCTCTTGCTCCACCACCGTGTCCAGTGCTATC
AACGGCTCCTTTTCGTCGGCTGTTATTGGGGTTCTTTACTTCGACGGCGG
TGGCCTTGCGGAAAACCTCGGCCAAAACCTCTGCATGCTCGTCGCGCGGC
CGGGATTCCTGGGCGCGGCCGTGCGCATTGCCGTGTTGGTGCTGTGCTGG
GTCGCCGGCTGGGTGACCCCGGTATGCCGGATCCTCCGCGGTTCCCGCAG
CATGGTGATGGCCATCACGACAATCAAGAGTAAGGGCACGGTGCGCCTCG
CTTCCGGAACAGATGCCTCGGCTCGGCCGCTGATCGACCCGGCGTACTTC
TCTCACCCGGAGGACCGGCAGGTGGCGTGCGAGGGATGGCGCACAGTTCG
GCGTGCGATTAGAGAGACGGAAACCGGCAAGGCTGTTTTTGGCACCGAGA
TCTTGCCAGGAAAAATGTGGGGGAAAACCTCCAGGATCACTTGCTTTTAC
CTACGGTGAATATCAGCAAGCCACCAATGGTAGAGGCCGACTTCACCGAG
GGGTCGTGTCACGGCGCGACCTACTTCTCTTGTGCATTGCCCTCCCCGCC
GCCACCGCCGCTACCGCCACCACCACCACCACCTTCTGAAGATTCCTCTT
GCTCCACCACCGTGTCCAGTGCTATCAACGGCTCCTTTTCGTCGGCTGTT
ATTGGGGTTCTTTACTTCGACGGCGGTGGCCTTGCGGAAAACCTCGGCCA
AAACCTCTGCATGCTCGTCGCGCGGCCGGGATTCCTGGGCGCGGCCGTGC
GCATTGCCGTGTTGGTGCTGTGCTGGGTCGCCGGCTGGGTGACCCCGGTA
TGCCGGATCCTCCGCGGTTCCCGCAGCATGGTGATGGCCATCACGACAAT
CAAGAGTAAGGGCACGGTGCGCCTCGCTTCCGGAACAGATGCCTCGGCTC
GGCCGCTGATCGACCCGGCGTACTTCTCTCACCCGGAGGACCGGCAGGTG
GCGTGCGAGGGATGGCGCACAGTTCGGCGTGCGATTAGAGAGACGGAAAC
CGGCAAGGCTGTTTTTGGCACCGAGATCTTGCCAGGAAAAATGTACAACT
ACGGCAACGACGACGAAAGCTTTTTAAAGTTCGCCCAAGCTAACTGCCTG
CCCTTCTTCCACCCTGTCGGCACCTGCCGGATGGGTCAAGGGGTGGAAGA
CTCGGTGGTGTCTGCGGACAACCTCAGGTACAACTACGGCAACGACGACG
AAAGCTTTTTAAAGTTCGCCCAAGCTAACTGCCTGCCCTTCTTCCACCCT
GTCGGCACCTGCCGGATGGGTCAAGGGGTGGAAGACTCGGTGGTGTCTGC
GGACAACCTCAGGGTGCACGGCATTTCCGGGCTAAGGGTGGCGGATGCCT
CGGTCGCGCCGCATATCCCCGCCACCCCGACGCAGGCGATGTGCATGATG
ATCGGGGATCGCGCGGCCGCTATCGCTCTCAGGGACCGGTTCGCGAAAGA
CCAGATCCAGGGTGCACGGCATTTCCGGGCTAAGGGTGGCGGATGCCTCG
GTCGCGCCGCATATCCCCGCCACCCCGACGCAGGCGATGTGCATGATGAT
CGGGGATCGCGCGGCCGCTATCGCTCTCAGGGACCGGTTCGCGAAAGACC
AGATCCAGGCGCGTATGCTCGAAACCGTGACCAGTTCCGTCGACTGAGCG
CGTATGCTCGAAACCGTGACCAGTTCCGTCGACTGA
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