mRNA_L-elsbetiae_contig8337.17343.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: A0A6H5KYY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY1_9PHAE) HSP 1 Score: 329 bits (844), Expect = 4.800e-100 Identity = 210/363 (57.85%), Postives = 225/363 (61.98%), Query Frame = 3 Query: 21 MPNWLASELCMVASFSFGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVVGMDNAHHVLNNLVVPNVVQFAVSLPWRVLLVLFPTMPXXXXXXXXXXXXXXXXXXXXXXXXXGGAKRKER---GGLGSQLQHLNTPTKGHSRTIVGGNPRGAAVAAAGERGPLQPPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVAAASK------GNTSALVDILLEADEDGPADTAAAAAQGFGAAVRGESAVASG-----ED---TSPESGPGFGGGGESGGDRVGRRRSFGEILRSAVTGSSNVRLRDHLFDLNTASPALPLP 1058 MPNWLASELCMVASFS GAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEY EFLVSWIPFYWLGKCLGLGLLYLPGGNIPTV+FERVVV GMDNAHHVLNNLVVPNVV+FAVSLPWRVLLVLFPTMP G ++K+ GG+ SQLQHLNTPTK S P+ AA A A Q PPL +GVA A G SALV LL+AD G GAA+R + A A ED TSPESG G G G R RRRSFGEI+RS VTG+S VRLRDHLFD +TASPA P+P Sbjct: 1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVLFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSGSGSGAAKKNKKAGRGE-----GLRKKQAATGGGITSQLQHLNTPTKKRSAEST---PKRAASAGAPSI-QHQTPPLPERGSPSKTTPVAAR--------------NGVANAGSDSKHGGGGASALVAELLDADV------------GTGAALRADGAAAIATPVPFEDDIATSPESG---GSGRRGSGGRPSRRRSFGEIIRSVVTGNSEVRLRDHLFDFSTASPAPPVP 325
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: D8LDS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS5_ECTSI) HSP 1 Score: 326 bits (835), Expect = 1.010e-98 Identity = 226/365 (61.92%), Postives = 242/365 (66.30%), Query Frame = 3 Query: 21 MPNWLASELCMVASFSFGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVVGMDNAHHVLNNLVVPNVVQFAVSLPWRVLLVLFPTMPXXXXXXXXXXXXXXXXXXXXXXXXXGGAKRKER---GGLGSQLQHLNTPTKGHSRTIVGGNPRGAAVAAAGERGPLQPPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVAAASK------GNTSALVDILLEADEDGPADTAAAAAQGFGAAVRGESAVAS------GED--TSPESGPGFGGGGESGGD--RVGRRRSFGEILRSAVTGSSNVRLRDHLFDLNTASPALPLP 1058 MPNWLASELCMVASFS GAWKTFKVLKHGGTDYNLLKTWCLLGLLR FEEY EFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVV GMDNAHH+LNNLVVPNVV+FAVSLPWRVLLVLFPTMP XXXXXXXXXXXXXXXXX G ++K+ GG+ SQLQHLNTPTK + P+ AA A A Q PPL +GVA A G SALV LL+AD G GAA R + A A G+D TSPESG G E G R RRRSFGEI+RSAVTG+S VRLRDHLFD +TASPA P+P Sbjct: 1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRVFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHILNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSXXXXXXXXXXXXXXXXXGE----GLRKKQAATGGGITSQLQHLNTPTK---KRAAESTPKRAASAGAPST-QQQTPPLPARGSPSKTTPVAAR--------------NGVANAGSDSKHGGGGASALVAELLDADG------------GTGAASRADGAAAIATPVPFGDDIATSPESG-----GSERRGXXGRPSRRRSFGEIIRSAVTGNSEVRLRDHLFDFSTASPAPPVP 326
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: A0A7R9YDB5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDB5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.290e-13 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 21 MPNWLASELCMVASFSFGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVVGMDNAHHVLN 323 M N++A+ + G W++FK+LK G D+ +L+ W +LG++R E LE+LVSW+PFYW K L L L P +P ++F+ +V+ M H VL+ Sbjct: 1 MVNYVATLALNLVCLFAGFWRSFKLLKAGTVDFTILEFWAVLGVVRLLENTLEWLVSWVPFYWTTKSLALLTLCFPESRLPGILFDTLVIPFMRFCHEVLS 101
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: A0A8K1FI23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI23_PYTOL) HSP 1 Score: 65.9 bits (159), Expect = 8.360e-9 Identity = 42/120 (35.00%), Postives = 57/120 (47.50%), Query Frame = 3 Query: 21 MPNWLASELCMVASFSFGAWKTFKVLKHG------GTDYNLLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVVGMDNAHHVLNNLVVPNVVQFAVS 362 M +L SE GA+++ K L T +L+ W LG L FEEY EF VSWIPFY+ KC+ LGLL +P I V++ + MD ++ V+P V V Sbjct: 1 MSFYLISEGLTCLGMFNGAYESLKALSRAEKGIEVSTLTQILEFWIALGALTIFEEYAEFFVSWIPFYYFFKCMLLGLLLVPSTKISHVLYHGFIEPTMDKIQEQVHARVLPVVESLVVQ 120
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: G4YIB0_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YIB0_PHYSP) HSP 1 Score: 63.9 bits (154), Expect = 3.010e-8 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 21 MPNWLASELCMVASFSFGAWKTFKVLKH--GGTDY----NLLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 278 M +L SE GA+++ KVL G D ++L+ W +L F++YLEF +SW PFY+L KC+ LGLL P + P ++FE Sbjct: 1 MTFYLLSEGLTCVGICSGAYESLKVLSRVEKGVDTATLASVLEFWIVLAAAAIFQQYLEFFISWFPFYYLFKCILLGLLLTPSKHFPHLLFE 92
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: A0A225WDV8_9STRA (Receptor expression-enhancing protein 5-like isoform X2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDV8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 9.510e-8 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 21 MPNWLASE-LCMVASFSFGAWKTFKVLKH--GGTDYNLL----KTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 278 M +L SE L V FS GA+++ KVL G D ++L + W +L FE+Y+EF +SW PFY+L KC+ LGLL P P ++FE Sbjct: 1 MTFYLLSEGLTCVGIFS-GAYESLKVLSRVEKGVDTDILAAVLELWIVLAATAIFEQYIEFFISWFPFYYLFKCVLLGLLLTPTTQFPHLLFE 92
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: W2MGF6_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2MGF6_PHYPR) HSP 1 Score: 58.9 bits (141), Expect = 1.690e-6 Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 3 Query: 21 MPNWLASE-LCMVASFSFGAWKTFKVLKH--GGTDYN----LLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 278 M +L SE L V FS GA+++ KVL G D + +L+ W +L F++Y+EF +SW PFY+L KC+ LGLL P + FE Sbjct: 1 MTFYLLSEGLTCVGIFS-GAYESLKVLSRVEKGVDTDTLAAVLEFWIVLAAAAIFQQYIEFFISWFPFYYLFKCVVLGLLLTPNKQFTHLFFE 92
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: A0A5D6Y973_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y973_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.040e-5 Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 3 Query: 72 GAWKTFKVLKHG------GTDYNLLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 278 GA+++ KVL T +L+ W +L +E+Y+EF VSWIPFY+L KC LGLL +P V+++ Sbjct: 23 GAYESLKVLSRADKGVETSTLCGILEFWVVLAATAVYEQYVEFFVSWIPFYFLFKCGFLGLLLVPHTKFVHVLYD 97
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Match: A0A833W9E4_PHYIN (TB2/DP1 HVA22 family protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W9E4_PHYIN) HSP 1 Score: 56.6 bits (135), Expect = 1.280e-5 Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 3 Query: 21 MPNWLASELCMVASFSFGAWKTFKVLKH--GGTDYN----LLKTWCLLGLLRAFEEYLEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFE 278 M +L SE GA+++ KVL G D + +L+ W +L F++Y+E +SW PFY+L KC+ LGLL P + + FE Sbjct: 1 MTFYLLSEGLTCVGIISGAYESLKVLSRVDKGVDTDTLAAVLELWIVLAAAAIFQQYIELFISWFPFYYLFKCVLLGLLLTPNKHFTHLFFE 92 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8337.17343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8337.17343.1 >prot_L-elsbetiae_contig8337.17343.1 ID=prot_L-elsbetiae_contig8337.17343.1|Name=mRNA_L-elsbetiae_contig8337.17343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=661bp MPNWLASELCMVASFSFGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEback to top mRNA from alignment at L-elsbetiae_contig8337:2364..5401+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8337.17343.1 ID=mRNA_L-elsbetiae_contig8337.17343.1|Name=mRNA_L-elsbetiae_contig8337.17343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3038bp|location=Sequence derived from alignment at L-elsbetiae_contig8337:2364..5401+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8337:2364..5401+ >mRNA_L-elsbetiae_contig8337.17343.1 ID=mRNA_L-elsbetiae_contig8337.17343.1|Name=mRNA_L-elsbetiae_contig8337.17343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3966bp|location=Sequence derived from alignment at L-elsbetiae_contig8337:2364..5401+ (Laminarionema elsbetiae ELsaHSoW15)back to top |