mRNA_L-elsbetiae_contig8330.17339.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8330.17339.1
Unique NamemRNA_L-elsbetiae_contig8330.17339.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8330.17339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8330contigL-elsbetiae_contig8330:4072..8366 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size888
Cds size888
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8330.17339.1prot_L-elsbetiae_contig8330.17339.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8330 4072..8366 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816916.1070352-CDS-L-elsbetiae_contig8330:4071..42051622816916.1070352-CDS-L-elsbetiae_contig8330:4071..4205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 4072..4205 +
1691683909.8067896-CDS-L-elsbetiae_contig8330:4071..42051691683909.8067896-CDS-L-elsbetiae_contig8330:4071..4205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 4072..4205 +
1622816916.1173065-CDS-L-elsbetiae_contig8330:4762..49221622816916.1173065-CDS-L-elsbetiae_contig8330:4762..4922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 4763..4922 +
1691683909.817233-CDS-L-elsbetiae_contig8330:4762..49221691683909.817233-CDS-L-elsbetiae_contig8330:4762..4922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 4763..4922 +
1622816916.1277587-CDS-L-elsbetiae_contig8330:5897..60501622816916.1277587-CDS-L-elsbetiae_contig8330:5897..6050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 5898..6050 +
1691683909.8268306-CDS-L-elsbetiae_contig8330:5897..60501691683909.8268306-CDS-L-elsbetiae_contig8330:5897..6050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 5898..6050 +
1622816916.1393769-CDS-L-elsbetiae_contig8330:6543..67621622816916.1393769-CDS-L-elsbetiae_contig8330:6543..6762Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 6544..6762 +
1691683909.8371994-CDS-L-elsbetiae_contig8330:6543..67621691683909.8371994-CDS-L-elsbetiae_contig8330:6543..6762Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 6544..6762 +
1622816916.1519508-CDS-L-elsbetiae_contig8330:7396..75031622816916.1519508-CDS-L-elsbetiae_contig8330:7396..7503Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 7397..7503 +
1691683909.8544712-CDS-L-elsbetiae_contig8330:7396..75031691683909.8544712-CDS-L-elsbetiae_contig8330:7396..7503Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 7397..7503 +
1622816916.1645443-CDS-L-elsbetiae_contig8330:8251..83661622816916.1645443-CDS-L-elsbetiae_contig8330:8251..8366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 8252..8366 +
1691683909.8656647-CDS-L-elsbetiae_contig8330:8251..83661691683909.8656647-CDS-L-elsbetiae_contig8330:8251..8366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8330 8252..8366 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8330.17339.1

>prot_L-elsbetiae_contig8330.17339.1 ID=prot_L-elsbetiae_contig8330.17339.1|Name=mRNA_L-elsbetiae_contig8330.17339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp
RCQGGSGEGGSLLELKPCPKTCPGTNGLHHHIHRDGKKIEQPYESKTHGE
QVMEYLEGALSNDRVQTTRSTGWGSKRLRREEAEAVAKEVCEVTSLDKAD
LDVLPACENLPPAVESTQMWDPVKQEDDNFGLTFDRLVSEHGAALGYDKV
LAIINHTESFDEAERILGRLRGTKIKKARSRNGRGGGDLVRQFTPDEAKR
FSRGTMKAAATPTNTRVFASLQANKFKNRKPIELVQYYQQHWLGNDGEPH
KEYEAILRAAITEHDVSAELLGTNGVCYARVIRPSPEEARNNMIL*
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mRNA from alignment at L-elsbetiae_contig8330:4072..8366+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8330.17339.1 ID=mRNA_L-elsbetiae_contig8330.17339.1|Name=mRNA_L-elsbetiae_contig8330.17339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4295bp|location=Sequence derived from alignment at L-elsbetiae_contig8330:4072..8366+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTGCCAAGGCGGCTCTGGAGAAGGAGGGTCTCTGCTGGAGTTGAAGCC
ATGCCCCAAGACATGCCCCGGCACCAACGGCTTGCACCACCACATCCATC
GAGACGGCAAAAAGATCGAGCAGCCGTATGAGAGGTAAGCTGCGCAGGAC
AGAAGAAGCCTGGTGTTCACCATGCCCGCCCCTTCGAGCAATCGAAAAGG
TGATAATCAGGTCGGTGCAATGTGATATGTTATGCGTCCCGACACTTGTG
CGTTAATTTGAATGATAGGCAACAAAACGCGCAAGAAACTACAGGCAAGC
TTTTCTACCTAATATTGTTAAAAAAAAAACTCTGAATCGCCAAAGAATGA
TCGGCTGTAGGCACCGGGCGCTTTCTCGGCTGCTGTCCACAGACTAGATG
AAGACTCACGGTTTGGTGACGCGCGCGGTTGGCCCATCTCTACGATGGCA
GTATTTTTTTCAGCGGTACAAATAGAAGCCCGAACTCCGTGCATGCGACG
TGACCCTCCCCTCCGAAAAATACATCGTGAGACGTACCTGGCGGACACCG
TCGCGTTCAGGCACGCAGGTTCACCCGTACAGAAGAGCGTCGGGTTCTCC
AAAGCTTCACGTCCAAAAACAAACTGATCTACCATGCGTAATTTTTCATG
CCGCGCATGTACATACGTGTGTACTCCCGTCGTCGACAAAGCAAAACGCA
CGGCGAGCAAGTGATGGAATACTTGGAGGGCGCACTGAGCAACGACAGGG
TGCAGACGACGAGATCGACAGGGTGGGGGAGCAAGAGGCTGCGGCGAGAG
GAGGCGGAAGCTGTTGCCAAGGAGGTGTGTGAAGTGACCAGCTTAGATAA
AGCTATGTTTTGTGTAAGATGAGGTTAATCCAGGCGGCCGGCTGACGCCT
CTTTTTTTGACTACCCTGTGGTTGTTATCGTGATAAGGAGTTCAATCATC
CGGTCCCGAGATTAGTAAAGTACGCAGCCAACACCGCGCGTGCGTGCCAG
TCATGCACTATTCACACTCTTCGGTGCATTGTGCCCGCCCCCCCCCTGCG
TCTATTTGTCACCTCCCCAAACATACCCACACAAACTCGCCAGAAGTATG
CACACGACGACGGTGGAACCCGTGGGATGACGCCGCCGTATGTATGTGTT
GTATGTTGTTGTATGTTGTCTTCACATTAAAAACCGTTCCGATTTCTCCA
TCCAGTACCTCTCAATGTCCGTACAAATCCAACACTTGATGCGGTCAATT
CCCGTGGTCACAGGCTAACTTATACCTAAGAAAAGGTACACGAAAAATAA
AATGGGCCCGAAGGGCCAGCAAAGCAATAACATATATAACGTATGCTGAA
GAAAATCGAGTAGATGTTCTGAAATCGTCTCGTGCCCTGCAACGCACTCG
CGACCCTGCCCCCGTCACCCGAAATATCCTGCACAAATATGCACAGGTAC
CCCGCAATGAACCACTAGCATTCCATGCGCCCCTTGACTCCCTTTATGTA
AGGGCTGACTGACCAACCACCGCGCGCTTGGCTATCGCGTGTGCCGTGCT
TTGCAAAATGGCGACGAAGGCCCCGTCTTCTGTGAAGAGCAGCGAGCCCG
AGGCCGACTCGTACAGGGTTAGAGGCCGGCTGGGACCACGCTTTCAGGTG
CTACATACGGGCTTCGTCGCAGAGGGGAGCCAACATCTGATCACGAGCTC
ATGCTTAATCTGGACAACAGAAACGATGACGATGTGTGGCTAGATGGTCC
TTAGGTACCCTTGATAGTGGACCCCTGTTTCTCTCTCTCCATCTCTGTCT
CTCCCTCTCGCTGCACCTTTTTGCAGGCAGACTTGGACGTGCTGCCGGCG
TGCGAAAACCTCCCGCCAGCGGTTGAGAGCACCCAAATGTGGGACCCTGT
GAAGCAGGAAGACGATAATTTCGGGCTAACCTTCGACCGCCTAGTCTCTG
AGCACGGAGCTGCTCTCGGGTACGACAAGGTGCGCAACTGATGCTTTCCG
TGCTTTGTGAAACCAAATTTAACAAGCACTTCATAGAAAGCAGGAAAAGC
ACGGGCGGACGCCCACCTTCTCCTAAGAAGGCCATTTAGCTCCCTCTCTC
TCTCTCTGTCTCTCTCTCGTAGGCTTGCACTTAGCGGGGGGCGTTGAACT
GATGAGTGGCAGAGGAGTGATTCTTCCAACAGCACCGTCATATGAAACCG
TCGGTTTTGCTGCTTTTTGCCCGGCGCTCTTGTCAAAAAAAGATCGTATT
TTTCGACGCCATAATTTCTGCTGATCGGGGCGATCGGATTACGCCTAAAC
GGCAAATACGAAGTATATGCTTACAAAGTATGTCACCCTCGAAGGAGGAC
CACCTATTGCAAGCACCGTCCAACACGCCCCCCTCCCGCCCTCGCTCCGG
AGTTCTTCGCACTGACTGACAAGTGCTGGAATCAAAATGTCATTTATCTC
TCCCATCTCCACCCGTCAGCAGGTTCTTGCGATCATTAACCACACAGAGA
GCTTCGACGAGGCCGAGCGCATCCTGGGCAGGCTCCGCGGCACCAAGATA
AAGAAGGCTCGCAGCAGAAATGGCAGGGGCGGAGGAGACTTGGTCCGGCA
GTTCACACCCGACGAGGCAAAGCGGTTCTCCCGTGGTACGATGAAGGCCG
CGGCCACCCCGACCAACACGCGCGTCTTCGCGAGCCTTCAGGTAAAATAC
AGCCGACAATGTTGTAGCACAAAGGGTTGAACCTGAGGAGGAATGTTGGG
CTTTAATTAAAAGGCCTTGAGATCGTCCATCTCCATCCGCGGGCACCGAG
GCGTGCAGATCTAGGTGCGTGCATGGTTCGTCGCTGTCAGCCCTCACAGC
TCCGCTGGTGTTTCGTTTTCGACGTGTCGAATGCCACGGGATTGCACGCG
TGTGCTGGGATATTCACAAAAAAAAAACTGCACTAGACTACCGTAGGTGA
CATCAGATAAGACACCCCCTGGACCGATATTGAAAGCTTGGTTACTCCGC
AACGAATACGATTCTAACCATAAACGCCGCATTTTCGGACAGCCCTCGAC
GAGATCTTTCCAACGCCGCCCTTTTCGGGACTGACGCTCTGCTTGCTGTG
GAGTTGTTGAGCTTTGAAAATCGGTCCAGGGGGTGTCTTATCTTATGTCA
CCTACGGTATGTACATTGGACATCAATCGACCGGACCAAGGACTTGTTTT
TCTCCCTGCGAAGCACACACACACACGCGGGCGCCCGCGCCACACACACT
CCTCTTGCTCTCTTGACGCACAGTCGGTGCCATCTTCTCTTCCTCTGCCC
CGCCTCTGTCACCGATCGAGGGTAGGCGAACAAGTTCAAGAACCGCAAGC
CGATCGAGCTGGTGCAATATTACCAGCAGCACTGGCTGGGCAATGACGGC
GAACCGCACAAGGAGTATGAGGCCATACTGAGGTGACACGAACATCTACT
GTATATCAAATTAACTTGCATGGTTACGTGCAAGTCTCTTCTATTATGTA
TCTACAAGTCGAAATATCTAGAGCTATGTAGGTAGACTAGTCTAGATAGT
ACCTTGGGCTCCGATCTGTGTTGCACACCGCGCAATCGGCGCTATGTAAT
GTACAACCCGAGAAACCTTGTTTTTTGTTTTCATATTTTGTTTGTGGATC
GATAGATGAGTCTATATATGCATCAAAATGACATAGACTACTTTTTGTGC
ACGGTTGGAGCACGCGATTAAGAGTCCAAGGAGAGGAAATAAGTTATCGG
CAAAGGTGTGTCGGCGTGTGAAAAACGGTGTCGCGACGAAGAGAAAGCCT
TGATACATAACATTATTGTGAAAACCGTACGGCGCAGCAACTTATCGACT
GAAAGACCGCGGCCAAGGAGTTGCCTAGATAGTGCATGAGTCATCAGGCT
ACCTTCTCGAATGGCCGCGTATTGTGCAGCAAAGCAGTCCCTCTGTCGAA
AAAATGCGTAGTCCTTGGTGACCTTCTTAGACATGTATATACACACGCTT
CGTACCGCTGGTGTCTCTATCAAAAAGACCGCCAAAGCTTGGGTATCGCC
TCCCACTCCTTGACCTCCCGCTCCCCCTGCTCCGCCCTCTTTTCTTTCCG
CTTTTCTCTTCTTATCGCAACTTTTCTTGACGCTCTGTTGCTTTGTGCCC
CCCCCCCCCCCTCTCTTTGCGCGCTACCAGAGCCGCGATCACTGAGCATG
ACGTGAGCGCGGAGTTGTTAGGGACTAATGGCGTGTGTTATGCGCGCGTG
ATCCGCCCTTCTCCTGAAGAAGCACGAAATAACATGATACTATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8330:4072..8366+

>mRNA_L-elsbetiae_contig8330.17339.1 ID=mRNA_L-elsbetiae_contig8330.17339.1|Name=mRNA_L-elsbetiae_contig8330.17339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1776bp|location=Sequence derived from alignment at L-elsbetiae_contig8330:4072..8366+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTGCCAAGGCGGCTCTGGAGAAGGAGGGTCTCTGCTGGAGTTGAAGCC
ATGCCCCAAGACATGCCCCGGCACCAACGGCTTGCACCACCACATCCATC
GAGACGGCAAAAAGATCGAGCAGCCGTATGAGAGAGGTGCCAAGGCGGCT
CTGGAGAAGGAGGGTCTCTGCTGGAGTTGAAGCCATGCCCCAAGACATGC
CCCGGCACCAACGGCTTGCACCACCACATCCATCGAGACGGCAAAAAGAT
CGAGCAGCCGTATGAGAGCAAAACGCACGGCGAGCAAGTGATGGAATACT
TGGAGGGCGCACTGAGCAACGACAGGGTGCAGACGACGAGATCGACAGGG
TGGGGGAGCAAGAGGCTGCGGCGAGAGGAGGCGGAAGCTGTTGCCAAGGA
GGTGTGTGAAGTGACCAGCTTAGATAAACAAAACGCACGGCGAGCAAGTG
ATGGAATACTTGGAGGGCGCACTGAGCAACGACAGGGTGCAGACGACGAG
ATCGACAGGGTGGGGGAGCAAGAGGCTGCGGCGAGAGGAGGCGGAAGCTG
TTGCCAAGGAGGTGTGTGAAGTGACCAGCTTAGATAAAGCAGACTTGGAC
GTGCTGCCGGCGTGCGAAAACCTCCCGCCAGCGGTTGAGAGCACCCAAAT
GTGGGACCCTGTGAAGCAGGAAGACGATAATTTCGGGCTAACCTTCGACC
GCCTAGTCTCTGAGCACGGAGCTGCTCTCGGGTACGACAAGGCAGACTTG
GACGTGCTGCCGGCGTGCGAAAACCTCCCGCCAGCGGTTGAGAGCACCCA
AATGTGGGACCCTGTGAAGCAGGAAGACGATAATTTCGGGCTAACCTTCG
ACCGCCTAGTCTCTGAGCACGGAGCTGCTCTCGGGTACGACAAGGTTCTT
GCGATCATTAACCACACAGAGAGCTTCGACGAGGCCGAGCGCATCCTGGG
CAGGCTCCGCGGCACCAAGATAAAGAAGGCTCGCAGCAGAAATGGCAGGG
GCGGAGGAGACTTGGTCCGGCAGTTCACACCCGACGAGGCAAAGCGGTTC
TCCCGTGGTACGATGAAGGCCGCGGCCACCCCGACCAACACGCGCGTCTT
CGCGAGCCTTCAGGTTCTTGCGATCATTAACCACACAGAGAGCTTCGACG
AGGCCGAGCGCATCCTGGGCAGGCTCCGCGGCACCAAGATAAAGAAGGCT
CGCAGCAGAAATGGCAGGGGCGGAGGAGACTTGGTCCGGCAGTTCACACC
CGACGAGGCAAAGCGGTTCTCCCGTGGTACGATGAAGGCCGCGGCCACCC
CGACCAACACGCGCGTCTTCGCGAGCCTTCAGGCGAACAAGTTCAAGAAC
CGCAAGCCGATCGAGCTGGTGCAATATTACCAGCAGCACTGGCTGGGCAA
TGACGGCGAACCGCACAAGGAGTATGAGGCCATACTGAGGCGAACAAGTT
CAAGAACCGCAAGCCGATCGAGCTGGTGCAATATTACCAGCAGCACTGGC
TGGGCAATGACGGCGAACCGCACAAGGAGTATGAGGCCATACTGAGAGCC
GCGATCACTGAGCATGACGTGAGCGCGGAGTTGTTAGGGACTAATGGCGT
GTGTTATGCGCGCGTGATCCGCCCTTCTCCTGAAGAAGCACGAAATAACA
TGATACTATAAAGCCGCGATCACTGAGCATGACGTGAGCGCGGAGTTGTT
AGGGACTAATGGCGTGTGTTATGCGCGCGTGATCCGCCCTTCTCCTGAAG
AAGCACGAAATAACATGATACTATAA
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