mRNA_L-elsbetiae_contig833.17335.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: D8LLP4_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP4_ECTSI) HSP 1 Score: 374 bits (959), Expect = 5.830e-121 Identity = 236/296 (79.73%), Postives = 243/296 (82.09%), Query Frame = 2 Query: 455 MGNKGSSHSSTLSRGQGATSDIRDALASLPGGAPTNKTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 MGNK SSHSST SRGQGATSD RDAL SLPG AP NKTGR VTAQKMKTAGATGVLALQEHGLKE+PEGLF LVKLRTLNM+S XXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTD+SAG N+L GAGALGALPACL KLVLR+N LGEVP AVL GLPALQVLDLSAN IEGLPPF A S RSNRIAAVDPFSGQQ+ISR LFADS VESLELAGN +DKTDLMRMEGVD FLARREKNKNKNLQGGGMLTLSVCGLD Sbjct: 1 MGNKESSHSSTFSRGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEIPEGLFTLVKLRTLNMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDVSAGSNQLAGAGALGALPACLKKLVLRDNRLGEVPAAVLDGLPALQVLDLSANGIEGLPPFGATLPALEELILDENSLRALGDELVGLSKLKKLSVRSNRIAAVDPFSGQQSISRGLFADSAVESLELAGNALDKTDLMRMEGVDDFLARREKNKNKNLQGGGMLTLSVCGLD 296
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A225UJM0_9STRA (Putative LRR protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJM0_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.350e-23 Identity = 143/271 (52.77%), Postives = 170/271 (62.73%), Query Frame = 2 Query: 563 KTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDL------------SANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGL 1339 K R+V QK+K+A ATGVLAL LK++P+ L+ L LR+L++S XXXXXXXXXXXXXXXXXXXXXXXX +PDLS L +LT L GN L ALP L KL L+ N L VP ++L L LQ LDL S N+++ LP XXXXXXXXXXXXXXXXXXXXXXXXXXXSAR N + + Q I+ +L DS V+ + L GN M K DL M+G DAFL RR K KNK + GG LS+CGL Sbjct: 20 KNSRSVQQQKLKSAKATGVLALPNSKLKKLPDELWQLSTLRSLDLSXXXXXXXXXXXXXXXXXXXXXXXXXXLAALPDLSPLQALTTLVLDGNVLEDLPL--ALPPNLIKLSLKGNKLRAVPRSILS-LVHLQELDLIXXXXXXXXXXXSDNALDLLPANLGEMQEXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRNSLVGKSAGAKTQPIAAQLLQDSAVQVMNLDGNPMTKEDLQAMDGFDAFLTRRTKLKNKEIHGGLNSDLSLCGL 287
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A5D6XNJ4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNJ4_9STRA) HSP 1 Score: 106 bits (264), Expect = 8.830e-22 Identity = 117/285 (41.05%), Postives = 144/285 (50.53%), Query Frame = 2 Query: 497 GQGATS--DIRDALASLPGGAPTNKTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXX-IPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 GQ AT + R A S P K R+V QK+K+A ATGVLAL +H LK++P L L LR+L++SSN +PDLSAL+ ALP LTKL L+ N L E+PL+V L LQ LD+S N + LP XXXXXXXXXXXXXXXXXXXXXXXX R+ G I+R + DS V + L GN M K DL M+G + FL RR + KNK + GG +S+CGLD Sbjct: 2 GQAATKAQEARAAAKSRP------KQTRSVLQQKLKSAAATGVLALPDHKLKQLPRELLELANLRSLDVSSNRLAELPRDFAAALPQLRTLKLAGNALTALPDLSALTXXXXXXXXXXXXXXXXE--ALPPNLTKLSLKNNRLRELPLSVTR-LAQLQELDVSGNELAALPEHVGALASLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRL-------GPHGIAREVLTDSGVHIMNLEGNPMSKFDLEAMDGFERFLERRTQAKNKEIHGGLSADVSLCGLD 270
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: H3GRI1_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GRI1_PHYRM) HSP 1 Score: 100 bits (250), Expect = 7.170e-20 Identity = 135/261 (51.72%), Postives = 159/261 (60.92%), Query Frame = 2 Query: 563 KTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFAD-STVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 K R+V QK+++A ATGVLAL LK++PE L L LRTL++ XXXXXXXXXXXXXXXXXXXXXXX +PDLSAL +LT L GN L + ALP LTKL L+ N L VP +VL L LQ XXXXXXXXXXXXXXXXXXXXXXXXXX SAR N + + Q I+ L + S V+ + L GN + K DL M+G DAFL RR K KNK + GG LS+CGL+ Sbjct: 20 KNNRSVQQQKLRSAKATGVLALPNSKLKKLPEELLELSTLRTLDLXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTLPDLSALEALTTLVLDGNLLEDIPS--ALPPNLTKLSLKGNRLRAVPRSVLE-LAQLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLKVLSARRNTLVGRSAGAKVQPIAAELLGEGSAVQVMNLEGNPLTKEDLQGMDGFDAFLTRRTKLKNKEIHGGLNSDLSLCGLE 277
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A6G0WCG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCG6_9STRA) HSP 1 Score: 100 bits (249), Expect = 7.300e-20 Identity = 110/259 (42.47%), Postives = 144/259 (55.60%), Query Frame = 2 Query: 566 TGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 T ++V AQK++ A ATG+L+L+ LK++P +F + L TL++S N +PDLSAL LT L+A N LT +GAL LTKL LR N L +P +V L AL+ LD++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AR N + G Q+ + S V ++L GN + K DL M+G AF+ RR+ K+K + GG +S+CGLD Sbjct: 16 TKKSVQAQKIERARATGILSLKGCKLKQIPADVFAIPTLHTLDLSQNAITELPPQITELTALKTLKVDGNQLVELPDLSALVKLTTLAADNNTLTR---IGALAPNLTKLTLRGNKLTTLPESVCT-LTALETLDVAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARHNEL-------GPQSFAPEFLHGSAVNVMQLEGNPLTKLDLEAMDGAQAFMERRKILKDKEIHGGLSTDVSLCGLD 263
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A662XQF7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQF7_9STRA) HSP 1 Score: 100 bits (250), Expect = 8.880e-20 Identity = 143/268 (53.36%), Postives = 166/268 (61.94%), Query Frame = 2 Query: 563 KTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTD-------LSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFAD-STVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 K R V QK++TA ATGVLAL + LK++P+ LF L LR+L+ XXXXXXXXXXXXXXXXXXXXXXXX +PDLSAL++LT L GN L ALP LTKL L+ N L VP +++ L L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAR N + +Q I+ L D STV+ L L GN M K DL MEG DAFL RR + KNK + GG LS+CGLD Sbjct: 24 KNSRGVQQQKLRTARATGVLALPDSKLKKLPDELFTLSALRSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXIATLPDLSALTALTTVRVLCLKLVLDGNALEDLP--NALPPNLTKLSLKGNRLRTVPHSIVA-LTQLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRNTLVGRSAGGSEQPIAAELLGDGSTVQVLNLEGNPMTKEDLQTMEGFDAFLTRRTQLKNKEIHGGLNSDLSLCGLD 288
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A6A3UTM1_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UTM1_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.310e-19 Identity = 142/261 (54.41%), Postives = 164/261 (62.84%), Query Frame = 2 Query: 563 KTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFA-DSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 KTGR+V QK+K+A ATGVLAL LK++PE L L +RT XXXXXXXXXXXXXXXXXXXXXXXXX +PDLS L +LT L N L ALP LTKL ++ N L VP +VL L LQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAR N + + Q+I+ L DS+V+ + L GN M K DL M+G DAFL RR K KNK + GG LS+CGL+ Sbjct: 20 KTGRSVQQQKLKSAKATGVLALPNSKLKKLPEELLELSAMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLPDLSGLEALTTLVLDCNMLEDIP--NALPPNLTKLSIKGNKLRAVPRSVLE-LAQLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRNTLVGRSAGAKVQSIAAELLGEDSSVQVMNLEGNPMTKEDLQGMDGFDAFLTRRTKLKNKEIHGGLNSDLSLCGLE 277
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: K3X5X7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5X7_GLOUD) HSP 1 Score: 99.4 bits (246), Expect = 2.410e-19 Identity = 138/261 (52.87%), Postives = 168/261 (64.37%), Query Frame = 2 Query: 563 KTGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFS-GQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 K ++V QK+K+A ATG+LAL +H LK+VP + + LRTL+ XXXXXXXXXXXXXXXXXXXXXXXXXX +PDLS L LT L GN L + ALP LTKL L N L E+P+AV L L+ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AR+N++ + + Q+I+ L + S V + L GN M K DL M+G D F ARR ++KNK + GG +S+CGLD Sbjct: 20 KQSKSVMQQKIKSAQATGMLALSDHKLKKVPPEVVAMPLLRTLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPDLSGLVGLTTLVLDGNALECIPS--ALPPNLTKLSLMGNKLREIPVAVTN-LKLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARANKLTGKEAAAPAPQSIAAELLSASNVHIMNLEGNPMTKFDLEDMDGFDKFFARRTESKNKEIHGGLNADVSLCGLD 277
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A7S2EAS0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAS0_TRICV) HSP 1 Score: 99.0 bits (245), Expect = 2.780e-19 Identity = 84/269 (31.23%), Postives = 112/269 (41.64%), Query Frame = 2 Query: 587 QKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXX--IPDLSALSSLTDLSAGGNRLTGAGA-----------LGALPACLTKLVLRENSLGEVPLAVLG-GLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRI---AAVDPFSGQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 QK++TA TG+L+L+EH L +VP+ ++ L LRTL++S N + +S LS L LSAGGNRL L +LP L +L L N VP + L L+ LDLS N + +P A S R+N I + V Q I LF ++ V L L GN M T L +G FL RR K KNKN+ GG + L+VCGL+ Sbjct: 1 QKIETAQKTGILSLREHKLDDVPDSVYELSNLRTLDLSKNNLTVLGRNLVNLANLKSLNCDSNKLQPGSLAPVSRLSKLQTLSAGGNRLGEPSRTEGPSQPQPEPLPSLPVSLKQLKLDTNFFSSVPPQICNPSLVKLEKLDLSFNFLATIPAGIAYLTSLVDINLDSNSIVSLPEEIGQLKKLKALSLRNNHIQVHSTVFSEKNPQPIPESLFTNTLVIDLNLHGNKMTNTQLNDFQGFHFFLERRTKVKNKNVYGGALTDLNVCGLE 269
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Match: A0A067D9M8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D9M8_SAPPC) HSP 1 Score: 97.1 bits (240), Expect = 1.150e-18 Identity = 135/259 (52.12%), Postives = 169/259 (65.25%), Query Frame = 2 Query: 566 TGRTVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNMSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDLSAGGNRLTGAGALGALPACLTKLVLRENSLGEVPLAVLGGLPALQVLDLSANSIEGLPPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSNRIAAVDPFSGQQAISRRLFADSTVESLELAGNVMDKTDLMRMEGVDAFLARREKNKNKNLQGGGMLTLSVCGLD 1342 T ++V A K++ A ATG+L+L LK +P+ +F + KL TL++S+N XXXXXXXXXXXXXXXXXXXXXXXXX+PDLSAL+ LT+L N+L L ALP LTKL R N L +P L L L+ +D+S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G Q+I+ + A S V ++L GN M K DL M+GVDAFL RR++ K+K L GG +++CGLD Sbjct: 17 TKKSVQATKIERAKATGILSLHGCKLKRIPDDVFGIEKLNTLDLSNNELXXXXXXXXXXXXXXXXXXXXXXXXXLPDLSALTKLTNLVLDNNKLA---TLQALPMGLTKLSARNNQLLALP-PTLCCLSQLESVDVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-------GPQSIAASILAASAVHIMQLEGNPMSKFDLEAMDGVDAFLLRRKELKDKELHGGLNTDVTLCGLD 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig833.17335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig833.17335.1 >prot_L-elsbetiae_contig833.17335.1 ID=prot_L-elsbetiae_contig833.17335.1|Name=mRNA_L-elsbetiae_contig833.17335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MGNKGSSHSSTLSRGQGATSDIRDALASLPGGAPTNKTGRTVTAQKMKTAback to top mRNA from alignment at L-elsbetiae_contig833:17965..21892+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig833.17335.1 ID=mRNA_L-elsbetiae_contig833.17335.1|Name=mRNA_L-elsbetiae_contig833.17335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3928bp|location=Sequence derived from alignment at L-elsbetiae_contig833:17965..21892+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig833:17965..21892+ >mRNA_L-elsbetiae_contig833.17335.1 ID=mRNA_L-elsbetiae_contig833.17335.1|Name=mRNA_L-elsbetiae_contig833.17335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig833:17965..21892+ (Laminarionema elsbetiae ELsaHSoW15)back to top |