mRNA_L-elsbetiae_contig832.17321.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig832.17321.1
Unique NamemRNA_L-elsbetiae_contig832.17321.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: D7FIM2_ECTSI (Chitobiosyldiphosphodolichol beta-mannosyltransferase, family GT33 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM2_ECTSI)

HSP 1 Score: 953 bits (2463), Expect = 0.000e+0
Identity = 501/676 (74.11%), Postives = 540/676 (79.88%), Query Frame = 1
Query:    1 MGGNASVPADRTTGTPPRPLRPKSRRASTTGILEHLVCKHVVVLVLGDVGRSPRMQYHAMSLASHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPG---------GGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMFDRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTG-------RPRPKKAR-EASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTLGRVRLGPGGSNRGGGDRGCGWRAGGIFSGA--GGWSVVVLAESVVVPAVVLLILLVSVPWLSDALEGWAVEWAAMTDRWRRRQT 1971
            MG  ASVPADRTTG PPRPLRP SRRA+T GILEHL CKHVV+LVLGDVGRSPRMQYHAMSLASHGVRVTLIGY+GERCI AVEDSPR+DTSRRFDPPLSGPWGKSLK+RAYLLF G+K V LL R+MYEL+LVAGR G         GG G AL+PD +LVQNPPSLPGLACVYLACL+RRC MVLDWHNLGFTMF  GPRHPLVW TRRAE FFGRRAT+NLTVSHAMRNWIKENF VPE Y+VYDQPP+FFR+PT+PERHELFTRL RTN DFADA+R L+ ASLRG  S  G G                     RP PKKAR              D G  RE+TE      +    AE EE               GQERTLFTTRSA+GV ELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYV +M+AARMSRVAVCTAWLEP+DYP+LLGSADLGI LHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQ GYNGCVF+DSTELALQLEALLDGFPRGGSELDGYRSNV+EV+RW+ENWDE+AWP+FS +GR+R GP  + RG G RG     GG FS A  GGWS   LAESVVVPA +LL+LLVSVPWLS +LE WA + AA  DRWRR+ T
Sbjct:    1 MGARASVPADRTTGKPPRPLRPASRRAATAGILEHLDCKHVVILVLGDVGRSPRMQYHAMSLASHGVRVTLIGYSGERCISAVEDSPRVDTSRRFDPPLSGPWGKSLKRRAYLLFAGVKAVALLVRVMYELVLVAGRRGAGGGAVADSGGFGDALRPDAILVQNPPSLPGLACVYLACLLRRCAMVLDWHNLGFTMFGCGPRHPLVWITRRAEGFFGRRATVNLTVSHAMRNWIKENFGVPEGYVVYDQPPEFFRAPTVPERHELFTRLTRTNPDFADAIRALTLASLRGELSAIGGGXXXXXXXXXXXXXXXXXXXXXRPHPKKARGHXXXXXXXXXXXSDSGGNREVTEVTPPPIARTPPAEWEEGDPA-----------GQERTLFTTRSADGVYELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVARMRAARMSRVAVCTAWLEPEDYPLLLGSADLGICLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQHGYNGCVFRDSTELALQLEALLDGFPRGGSELDGYRSNVKEVQRWRENWDEYAWPIFSKIGRLRAGPT-NTRGTGARGS--PRGGFFSNARGGGWSTGGLAESVVVPATMLLVLLVSVPWLSHSLESWAADGAAAADRWRRQWT 662          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A6A3VZC6_9STRA (UDP-glycosyltransferase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VZC6_9STRA)

HSP 1 Score: 354 bits (909), Expect = 3.520e-112
Identity = 204/545 (37.43%), Postives = 299/545 (54.86%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLA--SHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTLGRVR 1737
            +H VV+VLGDVGRSPRMQYHA+S+A  S  +RVTL+GY GE C+  V   P ++    F P L     + L ++ +LL V +KV++ L ++++ LL+ AG            D++L+QNPP++P    V+L C ++  + V+DWHNLG+++     G  HPLV   +  E  FGR+A  NL V+H M+ W+++ + + EA +++D+PP FF+  ++  +HELFTR+        D V                        W                              G      EE  L                     T + RG         R    V + R +RPA+++SSTSWT DEDF +LL AL   D RT+S ++   P ++VVVTGKGP K  Y+ +++     R+ + T WLE  DYP++LGSADLG+ LHTS+SG+DLPMKV+DMFGCG+PVCA+ F+CL ELV+   NG VF  S +L+ QL +LL G+P   ++L+  +++++ V+ W ENW+  A PLF    R+R
Sbjct:   22 RHAVVMVLGDVGRSPRMQYHALSMARMSPSLRVTLLGYAGETCVPDVARQPNLELLT-FTPRL-----RRLPRKLFLLLVPVKVLLQLLQLLWLLLVTAG----------SVDLVLLQNPPTIPTFVVVWLCCRLKGAKFVIDWHNLGYSLLALSLGNGHPLVKIAKWVERVFGRKADANLCVTHVMQTWLRDTWQI-EATVLHDKPPLFFKPTSIEVQHELFTRVGDQLEHCNDLV-----------------------TW------------------------------GETPTNLEETLL---------------------TRKTRG------LNGRKGNSVVQPRENRPAMIISSTSWTADEDFGILLTALELLDKRTSSLSASEFPNLLVVVTGKGPQKEMYLTKIRQLAFKRIRIATMWLEASDYPLVLGSADLGVCLHTSSSGLDLPMKVLDMFGCGLPVCAIGFKCLDELVKHDKNGLVFDSSEQLSTQLFSLLKGYPTDTAQLNRLQASLKTVQHWPENWNRVAAPLFKRQLRLR 469          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A484E7Z0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7Z0_BRELC)

HSP 1 Score: 353 bits (906), Expect = 1.150e-111
Identity = 204/545 (37.43%), Postives = 292/545 (53.58%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLA--SHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTLGRVR 1737
            +H VV+VLGDVGRSPRMQYHA+SLA  S  +RVTL+GY GE C+  V     I+    F P L     + L ++ ++L   +KV + L ++ + LL+  G            D++L+QNPP++P    V+L C ++  + V+DWHNLG+T+     G  HPLV   +  E  FGR+A  N  V+H M+ W+ E + + +A +++D+PP FF+  TL  +HEL TR+        D V     A++                                                      E+  L+                           Q+   FT  + + V + R +RPA+++SSTSWT DEDF +LL AL   + RT+S      P ++VVVTGKGP KA Y+E+++     R+ + T WLE  DYP+LLG+AD+G+ LHTS+SG+DLPMKV+DMFGC +PVCA+ F CL ELVQ G NG VF  S +L+ QL  LL G+P+   +LD  R++++ VKRW ENW   A P+F    R+R
Sbjct:   19 RHAVVMVLGDVGRSPRMQYHALSLARLSSNLRVTLLGYAGESCVPDVARQSNINVLT-FSPLL-----QRLPRKFFVLVAPMKVFLQLLQLFWLLLVTVG----------SLDLVLLQNPPTIPTFVVVWLCCRLKGAKFVIDWHNLGYTLLAISIGKGHPLVKVAKWVERVFGRKADANFCVTHVMQMWLHETWQI-KATVLHDKPPPFFKPTTLELQHELLTRVGDQLQHCNDLVAWEKQANI------------------------------------------------------EDTLLTRK-------------------------QKNCHFTGLNGKDVVQSRDNRPAMVISSTSWTADEDFGILLSALEHLNARTSSLDVTEFPNLLVVVTGKGPQKAMYLEKIQTLAFQRIRIATMWLEASDYPLLLGTADVGVCLHTSSSGLDLPMKVLDMFGCELPVCAIGFNCLDELVQHGINGLVFNSSEQLSAQLFDLLQGYPKNTRQLDHLRTSLKTVKRWPENWKRVAAPIFKKHLRLR 467          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A3F2RFE8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFE8_9STRA)

HSP 1 Score: 358 bits (919), Expect = 3.560e-111
Identity = 215/566 (37.99%), Postives = 306/566 (54.06%), Query Frame = 1
Query:   58 LRPKSRRAST--TGILEHLVCKHVVVLVLGDVGRSPRMQYHAMSLA--SHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTLGRVR 1737
            + P  RR +   +G   H   +H VV+VLGDVGRSPRMQYHA+SLA  +  +RVTL+GY GE C+  V     ID    F P L     + L +R +LL   +KV + L ++++ LL+ AG            D++L+QNPP++P    V+L C ++  + V+DWHNLG+++     G  HPLV   +  E  FGR+A  NL V+H M+ W++E + + EA +++D+PP FF+  +L  +HELF R+        D V                        W                              G+     EE  L+   R               G G ++G            + V   R +RPA+++SSTSWT DEDFSVLL AL   D RT + +    P ++VVVTGKGP K  Y+E+++     R+ + T WLE  DYP++LGSADLG+ LHTS+SG+DLPMKV+DMFGCG+PVCA+ F+CL ELV+ G NG VF  S +L+ QL  LL G+P   ++L+  R++++ V+ W ENW+  A PLF    R+R
Sbjct:    1 MAPMRRRPTKKPSGSSRHAPQRHAVVMVLGDVGRSPRMQYHALSLARMTPNMRVTLLGYAGEVCVPDVTRQSNIDLLT-FTPHL-----QRLPRRMFLLLAPVKVSLQLLQLLWLLLVTAG----------SVDLVLLQNPPTIPTFVVVWLCCRLKGAKFVIDWHNLGYSLLALSLGGGHPLVKIAKWIERVFGRKADANLCVTHVMKTWLRETWQI-EATVLHDKPPLFFKPTSLDAQHELFGRVGDQLEHCNDLV-----------------------TW------------------------------GQNSTNLEETLLTRRTR---------------GLGGKKG------------KSVVLPRDNRPAMIISSTSWTADEDFSVLLTALELLDKRTTALSVSEFPSLLVVVTGKGPQKEMYLEKIRQLAFKRIRIATMWLEASDYPLVLGSADLGVCLHTSSSGLDLPMKVLDMFGCGLPVCAIGFKCLDELVKHGKNGLVFNSSEQLSTQLYDLLKGYPTNTAQLNRLRASLKTVEHWPENWNRVAAPLFKQQLRLR 469          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: W4GXM8_9STRA (Glycos_transf_1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXM8_9STRA)

HSP 1 Score: 345 bits (884), Expect = 8.890e-109
Identity = 208/540 (38.52%), Postives = 289/540 (53.52%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLASH-GVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTL 1725
            +HVVVLVLGDVGRSPRMQYHA+SL+     +VTL+GY GERC+  +   P I   R F P         + +  ++L   +KV++ L ++ + LL   G            DV++VQNPP++P L   +L C ++R + V+DWHN G+T+     G  H  V      E  FG+ A  N  V+ AM+ W++ ++ +  A ++YD+PP+FF+  ++ E+HELFTRLA    D   A  V+ + +                           +P K  + +A                                                      TL TT     V + R DRPA+L+SSTSWT DEDF +L  AL   D R      P  P V+VVVTGKGP KA Y+++++  ++ RV + T WLE  DYP++LGSAD+GI LHTSTSG+DLPMKV+DMFGC VPVCAV F CL ELV+   NG VF+DS EL  QL++LL GFP+   +LD  R +++ V+ W  NW++ A P+F  L
Sbjct:    8 RHVVVLVLGDVGRSPRMQYHAVSLSKMPNTKVTLVGYEGERCVPQLLAQPNIHL-RTFAPV-------KVSRSLFVLSGPLKVLIQLCQLFWILLFTLG----------SIDVLMVQNPPTIPTLCVAWLTCKLKRAKFVIDWHNFGYTVLALSIGESHAFVKIATTVERVFGQLADANFCVTKAMQGWLQNHWRI-HATVLYDKPPEFFKPASIAEKHELFTRLA----DQLPAPWVVPSGNTT-------------------------KPPKPMDTNA------------------------------------------------------TLLTTEIHSAVHD-RLDRPAVLISSTSWTEDEDFGLLFRALVLLDARIVD--DPAYPDVLVVVTGKGPQKAMYLKKIQDMQLVRVHITTIWLEAADYPIMLGSADVGICLHTSTSGLDLPMKVLDMFGCQVPVCAVKFACLHELVRHNENGMVFEDSVELCDQLQSLLIGFPKS-EKLDLLRQSLESVEHWPSNWNQHALPVFQRL 441          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A024U5A9_9STRA (Glycos_transf_1 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5A9_9STRA)

HSP 1 Score: 342 bits (878), Expect = 6.550e-108
Identity = 215/540 (39.81%), Postives = 283/540 (52.41%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLAS-HGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTL 1725
            +HVVVLVLGDVGRSPRMQYHA+SL+      VTL+GY GERC+  V   P I   R F P         + +  ++L    KV++ L ++ + LL   G            DV++VQNPP++P L   +L C ++R + V+DWHN G+T+     G  H  V    R E  FG+ A  N  V+ AM+ W+ E++ + EA ++YD+PP+FF+  T+ E H+LFTRL             ++NA                           P  K                DVG G                                        TL TT+    V E R DRPA+L+SSTSWT DEDF +L +AL + D R A   S   P V+VVVTGKGP K  Y+ ++    + RV + T WLE  DYPV+LGSADLGI LHTSTSG+DLPMKV+DMFGC VPVCAV+F CL ELV+   NG VF+DS EL  QL  LL  FP+ G  L   ++ ++ V+ W ENW++ A P+F  L
Sbjct:   11 RHVVVLVLGDVGRSPRMQYHAVSLSKLPNTNVTLLGYEGERCVPQVLAQPNIHV-RTFAPV-------KVFRSLFVLSGPFKVLIQLCQLFWILLFSVG----------SIDVVMVQNPPTIPTLFVAWLTCKLKRAKFVIDWHNFGYTVLALSIGETHAFVKIATRFERMFGQVADANFCVTKAMQTWLHEHWRI-EATVLYDKPPEFFKPATVAETHDLFTRLGG---QLPQPWTSIANA---------------------------PAKK----------------DVGNG----------------------------------------TLLTTKRNSVVTE-RFDRPAVLISSTSWTEDEDFGLLFQALVQLDARIADDTS--YPDVLVVVTGKGPQKDMYLRKIAEMHLVRVRIATLWLEATDYPVMLGSADLGICLHTSTSGLDLPMKVLDMFGCQVPVCAVNFNCLDELVRHEINGMVFQDSVELCDQLHVLLKDFPKNGM-LRKLKNALKSVEHWPENWNQHARPVFERL 441          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: K3WDV9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDV9_GLOUD)

HSP 1 Score: 343 bits (880), Expect = 1.010e-107
Identity = 208/548 (37.96%), Postives = 294/548 (53.65%), Query Frame = 1
Query:   82 STTGILEHLVCKHVVVLVLGDVGRSPRMQYHAMSLAS-HGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLF 1716
            ST G       +H VV+VLGDVGRSPRMQYHA+SLA    VRV+L+GY GERCI  +   P +     F P +     + + ++ +LL   +KVV+ L ++ + LL  AG            D++L+QNPP++P    V+L C ++  + V+DWHNLG+++     GP+HPLV F    E  FGR+A  NL V+  M+ W+++ + +  A +++D+PP FF+   +  +H+LF R+        D +R   N  +  G + T                                             + EE  L+    +   G+ XXXXX                               RPA+++SSTSWT DEDF +LL AL   D +TA+ A    P ++VVVTGKGP K  Y+E+++     R+ + T WLE  DYP++LGSADLG+ LHTS+SG+DLPMKV+DMFGCGVPVCAV F+CL ELVQ   NG VF     LA QL  LL G+P   ++L+  R+++ +V+ W ENW   A PLF
Sbjct:   20 STNGSSTPAKPRHAVVMVLGDVGRSPRMQYHALSLAQLENVRVSLVGYAGERCIPELYAQPNVHFLT-FTPRM-----QRISRKFFLLLAPVKVVVQLLQLFWILLFTAG----------SIDLILLQNPPTIPTFVVVWLCCRLKGAKFVIDWHNLGYSILALSLGPKHPLVKFATWIERVFGRKADANLCVTKVMQEWLEDTWQI-HATVLHDKPPLFFKPTPVDVQHDLFLRVG-------DQIRHC-NDLVSWGTNST---------------------------------------------VLEETLLTQRNMVGTSGKXXXXXX------------------------XXXXXXXRPAMIISSTSWTADEDFGILLHALTLLDKQTAAMAVTEFPNLLVVVTGKGPQKEMYLERIRQLAFKRIRIATMWLEASDYPLVLGSADLGVCLHTSSSGLDLPMKVLDMFGCGVPVCAVGFKCLDELVQHEKNGLVFDSPEMLAAQLFELLKGYPTNAAKLNRLRASLTKVEHWPENWKRKAAPLF 473          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A5D6XQY7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQY7_9STRA)

HSP 1 Score: 339 bits (869), Expect = 2.760e-106
Identity = 204/546 (37.36%), Postives = 287/546 (52.56%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLA----SHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTLGRV 1734
            +H VV+VLGDVGRSPRMQYHA+SLA       +RV+++G+ GERC+  +   P +     F P L     + + +R +LL    KV++   ++ + LL+ AG            D++L+QNPP++P    V+L C ++    V+DWHNLG+++     GPRHPLV      E  FGR+A  NL V+H M+ W+++ + +  A +++D+PP FF+   L  +HELF R+        D V   S A                                                        +E  L                     T R RG   R        + V   R +RPA+L+SSTSWT DEDF +LL AL   D RTA   +   P ++VVVTGKGP K  Y+E+++     R+ + T WL+  DYP++LGSADLG+ LHTS+SG+DLPMKV+DMFGCGVPVCAV F+CL ELV+   NG +F    +LA QL  LL G+P G ++L+  R+ ++ V+ W ENW   A PLF  L R+
Sbjct:   23 RHAVVMVLGDVGRSPRMQYHALSLALLAPPAALRVSVVGHAGERCVPELLAQPNVRLLT-FAPLL-----QRVPRRFFLLLAPFKVIL---QLFWVLLVTAG----------SVDLVLLQNPPTIPTFVVVWLCCRLKGAAFVIDWHNLGYSILALSLGPRHPLVTVATWVERVFGRKADANLCVTHVMQRWLRDEWQI-AASVLHDKPPLFFKPTPLTVQHELFQRVGDQLSHCNDLVPWSSGA--------------------------------------------------------DETLL---------------------TRRVRGPSTR--------DDVVVRRENRPAVLISSTSWTADEDFGILLRALAHVDERTAQLPASEFPDLLVVVTGKGPQKQMYLERIRQLAFKRIRIATMWLDASDYPLVLGSADLGVCLHTSSSGLDLPMKVLDMFGCGVPVCAVGFKCLDELVKHDKNGLIFDSPEQLAAQLIELLGGYPTGAAKLNRLRAALRTVEHWPENWKRNAAPLFKKLIRL 463          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A0P1AWJ3_PLAHL (Chitobiosyldiphosphodolichol beta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWJ3_PLAHL)

HSP 1 Score: 335 bits (860), Expect = 6.820e-105
Identity = 193/533 (36.21%), Postives = 288/533 (54.03%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLA--SHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMFDR--GPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEF 1701
            +HV+V+VLGD+GRSPRMQYHA+SLA  +  +RVTL+GY GE C+  V +   I     F P L     + L ++ +LLF  IKV++ L ++++ LL+  G            D++L+QNPP++P    V+L C ++  + V+DWHNLG+++     G  HP+V   +  E  FGR+A  N  V+  M+ W++E + + +A +++D+PP FF+   +  +HEL  R+        D V                        W                              G  +   EE  L+   RI                              + ++ V + R +RPA+++SSTSWT DEDF +LL AL   D RT+S +    P ++VVVTGKGP K  Y+E+++     R+ + T WLE  DYP++LGSAD+G+ LHTS+SG+DLPMKV+DMFGCG+PVCA+ F+CL ELV+   NG VF  + EL+ QL  LL G+P+  ++L+  RS+++ V+ W EN  EF
Sbjct:   16 RHVIVMVLGDIGRSPRMQYHALSLARMTPSIRVTLLGYAGESCVPDVANQSNIKVLT-FTPLL-----QRLPRQLFLLFAPIKVLLQLLQLLWLLLITTG----------SMDLVLLQNPPTIPTFVVVWLCCRIKNAKFVIDWHNLGYSLLALAIGSTHPVVQIAKWIERVFGRKADANFCVTRVMQTWLQETWQI-QATVLHDKPPLFFKPTPIEIQHELLVRVGNQLEHCNDLV-----------------------TW------------------------------GENQVNLEETLLTRKFRI---------------------------HDGKQSKTVVQARENRPAMIISSTSWTVDEDFGILLAALDILDTRTSSLSVSEFPNLLVVVTGKGPQKDMYLEKIRKLSFKRIRIATMWLEASDYPLVLGSADVGVCLHTSSSGLDLPMKVLDMFGCGLPVCAIKFQCLDELVKHDKNGLVFDSAKELSAQLYDLLKGYPKNTAQLNRLRSSLKTVEHWPENCCEF 451          
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Match: A0A3M6V8R4_9STRA (Glyco_trans_4-like_N domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8R4_9STRA)

HSP 1 Score: 335 bits (859), Expect = 2.930e-104
Identity = 209/579 (36.10%), Postives = 300/579 (51.81%), Query Frame = 1
Query:  115 KHVVVLVLGDVGRSPRMQYHAMSLA--SHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLSGPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDVMLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMF--DRGPRHPLVWFTRRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTLPERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAEDGTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEEXXXXXXRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPDEDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAARMSRVAVCTA----------------------WLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGVPVCAVHFECLKELVQ-DGY---------------NGCVFKDSTELALQLEALLDGFPRGGSELDGYRSNVQEVKRWKENWDEFAWPLFSTL 1725
            +H VV+VLGDVGRSPRMQYHA+SLA  S  +RVTL+GY GERC+  V     I+    F P L     + L ++ +LL   IKV++ L +++Y LL+  G            D++L+QNPP++P    V+L C ++  + V+DWHNLG+++     G  H LV   +  E  FGR+A  NL V+HAM+ W++E + + EA +++D+PP FF+  +L  +HELF R+        D V    NA+                                                       EE  L                     T + RG      F+ + ++GV + R +RPA+++SSTSWT DEDF +LL AL   D  T+  +    P ++VVVTGKGP K  Y+E+++     R+ + T                       WLE  DYP++LGSADLG+ LHTS+SG+DLPMKV+DMFGCG+PVCA+ ++CL ELV+ D Y               NG VF  S +L+ QL  LL G+P   ++L+  RS+++ ++ W ENW+  A PLF TL
Sbjct:   21 RHAVVMVLGDVGRSPRMQYHALSLARMSPNLRVTLLGYAGERCVLDVSRQANINLLT-FTPRL-----QRLPRKLFLLLAPIKVILQLLQLLYLLLVTVG----------SVDLVLLQNPPTIPTFVVVWLGCRLKGAKFVIDWHNLGYSILALSLGSEHVLVKIAKWVERVFGRKADANLCVTHAMQAWLRETWKI-EATVLHDKPPHFFKPTSLYTQHELFARVGDQLEHCNDLVTWGQNAAN-----------------------------------------------------LEESLL---------------------TRKTRG------FSGKKSKGVVKPRENRPAMIISSTSWTADEDFGILLAALELLDKCTSLLSVSEFPNLLVVVTGKGPQKEMYLEKIRQLAFKRIRIATMYGAVLWNDEQRGLFLTICLLCRWLEASDYPLVLGSADLGVCLHTSSSGLDLPMKVLDMFGCGLPVCAIGYKCLDELVKHDKYFLYRLSRRLILSLHRNGLVFDSSEQLSTQLYNLLKGYPTDTAQLNRLRSSLKTIEHWPENWNRVAAPLFKTL 502          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig832.17321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM2_ECTSI0.000e+074.11Chitobiosyldiphosphodolichol beta-mannosyltransfer... [more]
A0A6A3VZC6_9STRA3.520e-11237.43UDP-glycosyltransferase n=3 Tax=Phytophthora TaxID... [more]
A0A484E7Z0_BRELC1.150e-11137.43Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3F2RFE8_9STRA3.560e-11137.99Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
W4GXM8_9STRA8.890e-10938.52Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
A0A024U5A9_9STRA6.550e-10839.81Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
K3WDV9_GLOUD1.010e-10737.96Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XQY7_9STRA2.760e-10637.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AWJ3_PLAHL6.820e-10536.21Chitobiosyldiphosphodolichol beta n=1 Tax=Plasmopa... [more]
A0A3M6V8R4_9STRA2.930e-10436.10Glyco_trans_4-like_N domain-containing protein n=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig832contigL-elsbetiae_contig832:3820..7026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score960.3
Seed ortholog evalue4.7e-277
Seed eggNOG ortholog2880.D7FIM2
Preferred nameALG1
KEGG koko:K03842
KEGG ReactionR05972
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
KEGG ModuleM00055
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000030,GO:0003006,GO:0003674,GO:0003824,GO:0004578,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009856,GO:0009987,GO:0010483,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019187,GO:0019538,GO:0022414,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0048856,GO:0048868,GO:0051703,GO:0051704,GO:0070085,GO:0071704,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.chitobiosyldiphosphodolichol beta-mannosyltransferase activity
EggNOG OGsCOG0438@1,KOG2941@2759
EC2.4.1.142
COG Functional cat.M
CAZyGT33
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Ec32 ortholog descriptionChitobiosyldiphosphodolichol beta-mannosyltransferase, family GT33
Ec32 orthologEc-27_000280.1
Exons5
Model size1974
Cds size1974
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig832.17321.1prot_L-elsbetiae_contig832.17321.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig832 3820..7026 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816914.8104045-CDS-L-elsbetiae_contig832:3819..40341622816914.8104045-CDS-L-elsbetiae_contig832:3819..4034Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 3820..4034 -
1691683908.719078-CDS-L-elsbetiae_contig832:3819..40341691683908.719078-CDS-L-elsbetiae_contig832:3819..4034Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 3820..4034 -
1622816914.8233457-CDS-L-elsbetiae_contig832:4088..41791622816914.8233457-CDS-L-elsbetiae_contig832:4088..4179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 4089..4179 -
1691683908.7326393-CDS-L-elsbetiae_contig832:4088..41791691683908.7326393-CDS-L-elsbetiae_contig832:4088..4179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 4089..4179 -
1622816914.8350294-CDS-L-elsbetiae_contig832:4529..47441622816914.8350294-CDS-L-elsbetiae_contig832:4529..4744Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 4530..4744 -
1691683908.7463994-CDS-L-elsbetiae_contig832:4529..47441691683908.7463994-CDS-L-elsbetiae_contig832:4529..4744Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 4530..4744 -
1622816914.8457463-CDS-L-elsbetiae_contig832:5089..58701622816914.8457463-CDS-L-elsbetiae_contig832:5089..5870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 5090..5870 -
1691683908.7551014-CDS-L-elsbetiae_contig832:5089..58701691683908.7551014-CDS-L-elsbetiae_contig832:5089..5870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 5090..5870 -
1622816914.8562837-CDS-L-elsbetiae_contig832:6354..70261622816914.8562837-CDS-L-elsbetiae_contig832:6354..7026Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 6355..7026 -
1691683908.7636435-CDS-L-elsbetiae_contig832:6354..70261691683908.7636435-CDS-L-elsbetiae_contig832:6354..7026Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig832 6355..7026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig832.17321.1

>prot_L-elsbetiae_contig832.17321.1 ID=prot_L-elsbetiae_contig832.17321.1|Name=mRNA_L-elsbetiae_contig832.17321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=658bp
MGGNASVPADRTTGTPPRPLRPKSRRASTTGILEHLVCKHVVVLVLGDVG
RSPRMQYHAMSLASHGVRVTLIGYTGERCIGAVEDSPRIDTSRRFDPPLS
GPWGKSLKQRAYLLFVGIKVVMLLGRIMYELLLVAGRPGGGAGGALKPDV
MLVQNPPSLPGLACVYLACLMRRCQMVLDWHNLGFTMFDRGPRHPLVWFT
RRAEAFFGRRATLNLTVSHAMRNWIKENFAVPEAYIVYDQPPDFFRSPTL
PERHELFTRLARTNIDFADAVRVLSNASLRGGASETGDGGGSGDLWAAED
GTGRPRPKKAREASAAARGGCAGGDVGRGREITEEVSLSDSPRITAEGEE
EEEEEGRGGTGRERGGQERTLFTTRSAEGVCELRRDRPALLVSSTSWTPD
EDFSVLLEALRRFDLRTASGASPTLPLVMVVVTGKGPDKAKYVEQMKAAR
MSRVAVCTAWLEPQDYPVLLGSADLGISLHTSTSGVDLPMKVVDMFGCGV
PVCAVHFECLKELVQDGYNGCVFKDSTELALQLEALLDGFPRGGSELDGY
RSNVQEVKRWKENWDEFAWPLFSTLGRVRLGPGGSNRGGGDRGCGWRAGG
IFSGAGGWSVVVLAESVVVPAVVLLILLVSVPWLSDALEGWAVEWAAMTD
RWRRRQT*
back to top

mRNA from alignment at L-elsbetiae_contig832:3820..7026-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig832.17321.1 ID=mRNA_L-elsbetiae_contig832.17321.1|Name=mRNA_L-elsbetiae_contig832.17321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3207bp|location=Sequence derived from alignment at L-elsbetiae_contig832:3820..7026- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGGTAACGCTTCCGTTCCAGCGGATAGGACCACCGGCACACCGCC GCGGCCGCTGCGCCCTAAGTCCCGCCGAGCCTCCACCACCGGGATTCTCG AGCACCTGGTCTGTAAACACGTTGTTGTCTTGGTCCTGGGAGACGTGGGC AGAAGCCCGCGCATGCAGTACCACGCCATGTCGCTGGCCTCCCACGGGGT GCGAGTAACCCTCATCGGCTACACGGGCGAGCGCTGCATCGGTGCCGTGG AGGACAGCCCGCGCATCGACACGTCCCGCCGCTTCGACCCCCCTCTTTCT GGACCCTGGGGTAAGAGCTTGAAGCAGCGGGCATACCTCCTGTTCGTCGG GATAAAGGTGGTGATGCTTCTCGGAAGGATTATGTACGAGCTGTTGCTGG TGGCTGGGCGGCCGGGCGGTGGTGCCGGCGGCGCTTTGAAGCCGGACGTT ATGCTCGTGCAGAACCCCCCGTCCCTTCCGGGGCTGGCCTGTGTCTACTT GGCGTGCCTTATGAGACGGTGTCAGATGGTGTTGGACTGGCACAACCTGG GATTCACCATGTTCGACCGTGGACCGCGGCACCCGCTGGTGTGGTTCACG CGAAGAGCCGAGGCGTTTTTTGGGAGGAGAGCGACGCTCAACTTGACCGT CTCGCACGCCATGCGCAACTGGGTGAGACGTATGTATGTACAGCAGTGCC GCCGTTTAGTGCAACGTGTACGGGGCATACTGTTTTGAGGCTGTGGGTGA GCCTAGGGCCTGACTTGCGTGGTGGTTTTCGTATCCCATGGGGCTTGCTT CATCTACTGAGTGCCTTCTTATCGCCCGGGCGAAATATTCAGCAGGTCGG AATTGACAATTGACGTGTCGCCCGTTTTGGTGGTAGCCAGGTCGCTTTGT CAAATAAGAGCTGTGCACTCAAGAGACAACGCAATAAGGTCCCGGTGCGC AGGTGCAGCAATCCAACATGGAGTTGCATATAATAAACTTTTACCAATCT GCTAGACCTGCCACTTCTAGACTGCATGCAACTTGACACCGCCCCAACTT GAGAGCTTTCTTCCGACCCGCACCATCCCTTCTGACCCTTCCTTCCCCCG CCCCCACCGGTTGCTCCATGCCAACACAAAAACGCGCACGCTCGCAACAA CACCAGATCAAAGAAAACTTCGCCGTCCCGGAAGCCTACATCGTCTACGA CCAGCCACCCGATTTCTTCCGCTCCCCGACGCTGCCGGAGCGCCACGAGC TCTTCACGAGGCTCGCGAGGACGAATATCGACTTCGCGGATGCCGTTCGC GTGCTTTCGAACGCCTCGTTGCGAGGGGGAGCATCGGAAACGGGCGACGG CGGCGGCAGTGGCGATCTGTGGGCGGCCGAGGACGGCACCGGGCGGCCGC GACCGAAGAAGGCGCGCGAGGCATCTGCGGCTGCCAGGGGCGGCTGCGCC GGCGGCGACGTTGGGAGGGGTAGAGAAATAACAGAAGAAGTATCGTTGTC TGACAGCCCGCGCATAACAGCAGAGGGGGAAGAGGAGGAGGAGGAGGAGG GCAGAGGTGGGACGGGGCGCGAGCGGGGTGGGCAGGAGCGGACCCTGTTT ACGACGCGGTCCGCGGAGGGCGTCTGCGAGCTCCGGCGGGACCGCCCGGC GCTGCTGGTGTCCTCTACGAGCTGGACCCCAGATGAGGACTTCTCGGTCT TACTGGAAGCGTTGCGGCGTTTCGACTTGCGAACGGCTTCGGGGGCGTCG CCCACGCTCCCCCTGGTGATGGTAGTGGTGACGGGGAAGGGTCCGGACAA GGCTAAGTACGTGGAGCAGATGAAGGCGGCGCGGATGTCCAGGGTCGCGG TGTGCACGGCTTGGCTTGAGCCGCAGGACTACCCCGTGCTGCTGGGCAGC GCCGACCTGGGTATTAGCTTGCACACATCCACATCGGGTATGTTATTTGG TCGGTGCTCTGCATTGTGTGTTTCTCAACGTGATGCTCTCTGGTGCTCGC GGCCTGACGCCTCCTCTGAGAGCATGGCATTGGGAAGCTTGTCGACTGCT TGTTGAGTTGATGCCCACATACCGTGTCCTTGGTTGTGCCCTGCTTTTCG CTCGGTTTTTGATACGAACTGCAGAAGAAAACCTAAACTTACCCTTACAC ACAGAATAAGCGAGCTTTCCCGCACGCCGTTTCCACGGCACACGCACACT GCTGCGCGTCTATTGCGGCCTGCTGTCTGTATCCCGTCCGGACACGTGCG CTTCAACGCCAACACATGGAATTAAAACGAAGGGGTGGACCTACCGATGA AGGTGGTGGACATGTTCGGCTGCGGGGTGCCTGTGTGCGCGGTGCACTTC GAGTGCCTCAAGGAGCTCGTGCAGGACGGCTACAACGGGTGCGTCTTCAA GGACAGCACGGAGCTGGCTCTGCAGCTGGAGGCGCTGCTGGACGGGTTTC CGAGGGGTGGAAGTGAGCTGGATGGGTACCGAAGCAACGTCCAGGAGGTA AGAGAAATAACTCGAGAGGTCCGAACGATGTCGTCACCTTGTCACTGCTC TCAGGCCGGCCATGCAACGGATACAACAGGGTCGGAGGCGTCGCGTTTCC TCGACGGGGTTAAGAAAACACACTCACGCAAAGCGCCCCCAAGGAAACTT GTAAAACCAATGAAGCACCACCACACACCGGCCCCCGGCTTGGTCCGGTG CAAGTCAGTACAATACCGGCTTTGCATGATAAAGATGCAGCTGTCGATGG CCTAATGCAAAGGGCCATGCATGAGGACGGTTGCCTCCGCGCTGAGGTTA CCCTTCGATCTACCTTACCTCCCTGTGCGAACAAACACCACTTTAAGGTT AAGCGATGGAAAGAAAACTGGGACGAGTTCGCGTGGCCGCTTTTCTCCAC ACTGGGACGAGTACGACTTGGACCCGGGGGCAGCAATAGTGGCGGCAGCA GCGGCGGCGGCTGTGGCTGCGGTGCCGGTGCCAGTGCCGGAGGAGGCGGC GGCGACAGAGGCTGCGGGTGGCGCGCCGGGGGCATTTTTTCGGGGGCGGG GGGGTGGTCGGTGGTTGTGTTGGCGGAGTCAGTGGTTGTGCCCGCGGTTG TGCTCTTGATCTTGCTCGTGAGCGTCCCCTGGTTGTCGGACGCGCTTGAG GGCTGGGCGGTCGAATGGGCTGCCATGACCGACCGCTGGCGGCGCCGACA GACCTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig832:3820..7026-

>mRNA_L-elsbetiae_contig832.17321.1 ID=mRNA_L-elsbetiae_contig832.17321.1|Name=mRNA_L-elsbetiae_contig832.17321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3948bp|location=Sequence derived from alignment at L-elsbetiae_contig832:3820..7026- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGGTAACGCTTCCGTTCCAGCGGATAGGACCACCGGCACACCGCC
GCGGCCGCTGCGCCCTAAGTCCCGCCGAGCCTCCACCACCGGGATTCTCG
AGCACCTGGTCTGTAAACACGTTGTTGTCTTGGTCCTGGGAGACGTGGGC
AGAAGCCCGCGCATGCAGTACCACGCCATGTCGCTGGCCTCCCACGGGGT
GCGAGTAACCCTCATCGGCTACACGGGCGAGCGCTGCATCGGTGCCGTGG
AGGACAGCCCGCGCATCGACACGTCCCGCCGCTTCGACCCCCCTCTTTCT
GGACCCTGGGGTAAGAGCTTGAAGCAGCGGGCATACCTCCTGTTCGTCGG
GATAAAGGTGGTGATGCTTCTCGGAAGGATTATGTACGAGCTGTTGCTGG
TGGCTGGGCGGCCGGGCGGTGGTGCCGGCGGCGCTTTGAAGCCGGACGTT
ATGCTCGTGCAGAACCCCCCGTCCCTTCCGGGGCTGGCCTGTGTCTACTT
GGCGTGCCTTATGAGACGGTGTCAGATGGTGTTGGACTGGCACAACCTGG
GATTCACCATGTTCGACCGTGGACCGCGGCACCCGCTGGTGTGGTTCACG
CGAAGAGCCGAGGCGTTTTTTGGGAGGAGAGCGACGCTCAACTTGACCGT
CTCGCACGCCATGCGCAACTGGATGGGCGGTAACGCTTCCGTTCCAGCGG
ATAGGACCACCGGCACACCGCCGCGGCCGCTGCGCCCTAAGTCCCGCCGA
GCCTCCACCACCGGGATTCTCGAGCACCTGGTCTGTAAACACGTTGTTGT
CTTGGTCCTGGGAGACGTGGGCAGAAGCCCGCGCATGCAGTACCACGCCA
TGTCGCTGGCCTCCCACGGGGTGCGAGTAACCCTCATCGGCTACACGGGC
GAGCGCTGCATCGGTGCCGTGGAGGACAGCCCGCGCATCGACACGTCCCG
CCGCTTCGACCCCCCTCTTTCTGGACCCTGGGGTAAGAGCTTGAAGCAGC
GGGCATACCTCCTGTTCGTCGGGATAAAGGTGGTGATGCTTCTCGGAAGG
ATTATGTACGAGCTGTTGCTGGTGGCTGGGCGGCCGGGCGGTGGTGCCGG
CGGCGCTTTGAAGCCGGACGTTATGCTCGTGCAGAACCCCCCGTCCCTTC
CGGGGCTGGCCTGTGTCTACTTGGCGTGCCTTATGAGACGGTGTCAGATG
GTGTTGGACTGGCACAACCTGGGATTCACCATGTTCGACCGTGGACCGCG
GCACCCGCTGGTGTGGTTCACGCGAAGAGCCGAGGCGTTTTTTGGGAGGA
GAGCGACGCTCAACTTGACCGTCTCGCACGCCATGCGCAACTGGATCAAA
GAAAACTTCGCCGTCCCGGAAGCCTACATCGTCTACGACCAGCCACCCGA
TTTCTTCCGCTCCCCGACGCTGCCGGAGCGCCACGAGCTCTTCACGAGGC
TCGCGAGGACGAATATCGACTTCGCGGATGCCGTTCGCGTGCTTTCGAAC
GCCTCGTTGCGAGGGGGAGCATCGGAAACGGGCGACGGCGGCGGCAGTGG
CGATCTGTGGGCGGCCGAGGACGGCACCGGGCGGCCGCGACCGAAGAAGG
CGCGCGAGGCATCTGCGGCTGCCAGGGGCGGCTGCGCCGGCGGCGACGTT
GGGAGGGGTAGAGAAATAACAGAAGAAGTATCGTTGTCTGACAGCCCGCG
CATAACAGCAGAGGGGGAAGAGGAGGAGGAGGAGGAGGGCAGAGGTGGGA
CGGGGCGCGAGCGGGGTGGGCAGGAGCGGACCCTGTTTACGACGCGGTCC
GCGGAGGGCGTCTGCGAGCTCCGGCGGGACCGCCCGGCGCTGCTGGTGTC
CTCTACGAGCTGGACCCCAGATGAGGACTTCTCGGTCTTACTGGAAGCGT
TGCGGCGTTTCGACTTGCGAACGGCTTCGGGGGCGTCGCCCACGCTCCCC
CTGGTGATGGTAGTGGTGACGGGGAAGGGTCCGGACAAGGCTAAGTACGT
GGAGCAGATGAAGGCGGCGCGGATGTCCAGGGTCGCGGTGTGCACGGCTT
GGCTTGAGCCGCAGGACTACCCCGTGCTGCTGGGCAGCGCCGACCTGGGT
ATTAGCTTGCACACATCCACATCGGATCAAAGAAAACTTCGCCGTCCCGG
AAGCCTACATCGTCTACGACCAGCCACCCGATTTCTTCCGCTCCCCGACG
CTGCCGGAGCGCCACGAGCTCTTCACGAGGCTCGCGAGGACGAATATCGA
CTTCGCGGATGCCGTTCGCGTGCTTTCGAACGCCTCGTTGCGAGGGGGAG
CATCGGAAACGGGCGACGGCGGCGGCAGTGGCGATCTGTGGGCGGCCGAG
GACGGCACCGGGCGGCCGCGACCGAAGAAGGCGCGCGAGGCATCTGCGGC
TGCCAGGGGCGGCTGCGCCGGCGGCGACGTTGGGAGGGGTAGAGAAATAA
CAGAAGAAGTATCGTTGTCTGACAGCCCGCGCATAACAGCAGAGGGGGAA
GAGGAGGAGGAGGAGGAGGGCAGAGGTGGGACGGGGCGCGAGCGGGGTGG
GCAGGAGCGGACCCTGTTTACGACGCGGTCCGCGGAGGGCGTCTGCGAGC
TCCGGCGGGACCGCCCGGCGCTGCTGGTGTCCTCTACGAGCTGGACCCCA
GATGAGGACTTCTCGGTCTTACTGGAAGCGTTGCGGCGTTTCGACTTGCG
AACGGCTTCGGGGGCGTCGCCCACGCTCCCCCTGGTGATGGTAGTGGTGA
CGGGGAAGGGTCCGGACAAGGCTAAGTACGTGGAGCAGATGAAGGCGGCG
CGGATGTCCAGGGTCGCGGTGTGCACGGCTTGGCTTGAGCCGCAGGACTA
CCCCGTGCTGCTGGGCAGCGCCGACCTGGGTATTAGCTTGCACACATCCA
CATCGGGGGTGGACCTACCGATGAAGGTGGTGGACATGTTCGGCTGCGGG
GTGCCTGTGTGCGCGGTGCACTTCGAGTGCCTCAAGGAGCTCGTGCAGGA
CGGCTACAACGGGTGCGTCTTCAAGGACAGCACGGAGCTGGCTCTGCAGC
TGGAGGCGCTGCTGGACGGGTTTCCGAGGGGTGGAAGTGAGCTGGATGGG
TACCGAAGCAACGTCCAGGAGGGGTGGACCTACCGATGAAGGTGGTGGAC
ATGTTCGGCTGCGGGGTGCCTGTGTGCGCGGTGCACTTCGAGTGCCTCAA
GGAGCTCGTGCAGGACGGCTACAACGGGTGCGTCTTCAAGGACAGCACGG
AGCTGGCTCTGCAGCTGGAGGCGCTGCTGGACGGGTTTCCGAGGGGTGGA
AGTGAGCTGGATGGGTACCGAAGCAACGTCCAGGAGGTTAAGCGATGGAA
AGAAAACTGGGACGAGTTCGCGTGGCCGCTTTTCTCCACACTGGGACGAG
TACGACTTGGACCCGGGGGCAGCAATAGTTAAGCGATGGAAAGAAAACTG
GGACGAGTTCGCGTGGCCGCTTTTCTCCACACTGGGACGAGTACGACTTG
GACCCGGGGGCAGCAATAGAGGCGGCGGCGACAGAGGCTGCGGGTGGCGC
GCCGGGGGCATTTTTTCGGGGGCGGGGGGGTGGTCGGTGGTTGTGTTGGC
GGAGTCAGTGGTTGTGCCCGCGGTTGTGCTCTTGATCTTGCTCGTGAGCG
TCCCCTGGTTGTCGGACGCGCTTGAGGGCTGGGCGGTCGAATGGGCTGCC
ATGACCGACCGCTGGCGGCGCCGACAGACCTGAGAGGCGGCGGCGACAGA
GGCTGCGGGTGGCGCGCCGGGGGCATTTTTTCGGGGGCGGGGGGGTGGTC
GGTGGTTGTGTTGGCGGAGTCAGTGGTTGTGCCCGCGGTTGTGCTCTTGA
TCTTGCTCGTGAGCGTCCCCTGGTTGTCGGACGCGCTTGAGGGCTGGGCG
GTCGAATGGGCTGCCATGACCGACCGCTGGCGGCGCCGACAGACCTGA
back to top