mRNA_L-elsbetiae_contig8311.17317.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI) HSP 1 Score: 350 bits (897), Expect = 2.060e-106 Identity = 195/285 (68.42%), Postives = 215/285 (75.44%), Query Frame = 1 Query: 58 RGA-EGAGDSFGLVELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTDGSESYGESDWSLPTGTSSAAPGSS 909 RGA + A D+F LVELPI WPLGRYLQA GL LE ++L LFGENSVDV+QPTFWHHL DRLTSPFVVFNLFNQVLWMLE YW KALLAI EV+ VEA+FVAD ERR+ QLDIRN+ P K+VRAWRGGQW+ + VS MLPGD+VSLK+GV + A GS AF VGELPAD+LLLRGTAVV+E+SLTGESVPQIKTSLTSEPIDFED LDMTGRHS HVLLSGTTLLDQTDGS+S +S PT TSSAA GSS Sbjct: 301 RGAGDEAADTFELVELPIRWPLGRYLQAGGLTLEAAGAKLRLFGENSVDVKQPTFWHHLADRLTSPFVVFNLFNQVLWMLELYWLKALLAIGEVIGVEAIFVADAERRRMQLDIRNSKKPTKRVRAWRGGQWVPIPVSSMLPGDLVSLKTGVVAVA-PEGSEVGDGQDDAKMQDEE---------------AFFVGELPADVLLLRGTAVVNEASLTGESVPQIKTSLTSEPIDFEDELDMTGRHSGHVLLSGTTLLDQTDGSDS--DSSRPSPTATSSAALGSS 567
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A6H5K3A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3A7_9PHAE) HSP 1 Score: 305 bits (780), Expect = 2.670e-93 Identity = 159/237 (67.09%), Postives = 179/237 (75.53%), Query Frame = 1 Query: 79 DSFGLVELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAA--GSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTG 783 D+F LVELP WPLGRYLQA GL LED ++L +FGENSVDV+QPTFWHHL DRLTSPFVVFNLFNQVLWMLE YW KALLAI EV+ VEA+FVAD ERR++QLDIRN+N P K+VRAWRGGQW+ + VS MLPGD+VSLK+GV + A GS G AF VGELPAD+LLLRGTAVV+E+SLTGESVPQIKTSLTSEPIDFED LD+ G Sbjct: 405 DTFELVELPTRWPLGRYLQAGGLTLEDAVTKLRMFGENSVDVKQPTFWHHLADRLTSPFVVFNLFNQVLWMLELYWLKALLAIGEVIGVEAVFVADAERRRRQLDIRNSNKPTKRVRAWRGGQWVPIPVSSMLPGDLVSLKTGVVAVAPEGSEGGDGQDDKKGQDEE------------------AFFVGELPADVLLLRGTAVVNEASLTGESVPQIKTSLTSEPIDFEDELDIAG 623
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A836CMB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB3_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.870e-30 Identity = 86/273 (31.50%), Postives = 129/273 (47.25%), Query Frame = 1 Query: 58 RGAEGAGDSFGLVELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTDGSESYGESDWSLP 876 RGA + +V+LP+ P+ RY++A GL + R +G NS+ V T VD + P+ VF LF+Q+L +LE +W A ++ ++ E + K L A + V+ WR G W + ++PGDV++L GS ELPAD+++LRG+A+VDE++LTGE VPQ+K SL S D +LD+ H +H L +GTTLL T G++ +W LP Sbjct: 335 RGAAPHRSACTMVDLPVDLPVQRYIEAAGLGAAEARRRRARYGRNSLRVLPRTVRGTFVDNVLGPYSVFQLFSQLLGVLEQHWAHAAMSAGFTLASEWTAAYEALASSKLLSADQAARGGRPVQCWRDGAWAELPSEQLVPGDVMALAP--------EGSPM---------------------------------ELPADMVVLRGSALVDEATLTGEGVPQMKASLLSAVFDEGAALDVARAHRTHALFAGTTLLQTTPGADEEPPHEWRLP 566
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S2L323_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L323_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.650e-27 Identity = 83/238 (34.87%), Postives = 118/238 (49.58%), Query Frame = 1 Query: 115 PLGRYLQARGLALEDVPSRLGL-FGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825 PL + Q G++ G+ FGEN DV QPTF +L SPF VF LF VLWML+ YW + + +++ EA V R K +R + A+K+R +R G W + + +LPGD++SL V + +PAD+L+LRG+ VV+E+SLTGESVPQ+K + SE ++ E LDM RH +HVL +GT +L Sbjct: 109 PLNFFKQWAGISSNHQLEAAGVRFGENKFDVRQPTFKDMYKKQLLSPFTVFQLFCVVLWMLDDYWQYSAFTLFMILTFEATVVFS--RIKSLSALRGMGNTARKIRVFREGVWTKIWTTELLPGDIMSLTRSVKKKNSAEAVVDPKTETSESSEDGDV--------------------VPADVLVLRGSTVVNEASLTGESVPQMKEGI-SELVEGEH-LDMKTRHKTHVLYAGTKIL 322
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S1TUB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUB7_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.870e-27 Identity = 97/248 (39.11%), Postives = 136/248 (54.84%), Query Frame = 1 Query: 94 VELPIGWPLGRYLQARGLALE-DVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSL---TSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825 + + +P+G Y+ GL+ E + + +G N+ ++ PTF V +L SP VVF +F+ LW+L+ YW + +I + E+ V R K +RN S AK V +R +W+ +S +LPGD++SL G A GS XXXXXXXXXXXXXXXX V P D L+LRG+AVV+ESSLTGES+PQ+K +L + E+ L++ G H HVL GT LL Sbjct: 215 IRCKVDYPVGNYMGTSGLSSETSMRAARQKYGRNTCTLDMPTFGELYVQQLLSPLVVFQIFSSCLWLLDEYWQYSAFSIFMIFVFESTVVFS--RLKSLGTLRNMGSGAKTVSVFRRQRWMRISSDDLLPGDLLSLSLKGGKAVGSAEEGNDGGEAAAKXXXXXXXXXXXXXXXXNTEADMV----PCDALILRGSAVVNESSLTGESIPQMKAALRVDVGNAKEAEEPLNIKGTHKIHVLFGGTRLL 456
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7J6PDK4_PEROL (Cation_ATPase_N domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PDK4_PEROL) HSP 1 Score: 121 bits (303), Expect = 6.370e-27 Identity = 77/254 (30.31%), Postives = 124/254 (48.82%), Query Frame = 1 Query: 91 LVELPIGWPLGRYLQ----ARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRN-ANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTD 837 ++ P+ P+ +Y +GL+ ++V + L+G N VD+ P F+ D++ +P +F + +LWM++ YW + + +EA V +RR+ L +RN A + R GQW TV ++PGD ++L + + + S S V +P D L+L G+AVV+E+SLTGESVPQ+K + ++ D + DMTGR HVL SGT+LL T+ Sbjct: 185 MLTCPMNLPISKYTNESSSTKGLSTDEVQRKQDLYGFNKVDIPVPPFYILYRDQILNPIPIFQILCCLLWMMDEYWKYTVFTFLSIFGMEAGTVF--QRRRNLLTLRNMAGKNIIPISVLRDGQWTTVMSDQLVPGDRINLSNDFNTNSSSSSSKTSPAKSDNAERKPQEQ----------------VTMIPCDCLILEGSAVVNEASLTGESVPQLKDEIETDGDDMSRAFDMTGRDRIHVLFSGTSLLQATN 420
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7J6M3I4_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M3I4_PEROL) HSP 1 Score: 120 bits (301), Expect = 1.270e-26 Identity = 76/254 (29.92%), Postives = 124/254 (48.82%), Query Frame = 1 Query: 91 LVELPIGWPLGRYLQ----ARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRN-ANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTD 837 ++ P+ P+ +Y +GL+ ++V + L+G N VD+ P F+ D++ +P +F + +LWM++ YW + + +EA V +RR+ L +RN A + R GQW+TV ++PGD ++L + + + S V +P D L+L G+AVV+E+SLTGESVPQ+K + ++ D + DMTGR HVL SGT+LL T+ Sbjct: 185 MLTCPMNLPISKYTNESSSTKGLSTDEVQRKQDLYGFNKVDIPVPPFYILYRDQILNPIPIFQILCCLLWMMDEYWKYTVFTFLSIFGMEAGTVF--QRRRNLLTLRNMAGKNIIPISVLRDGQWMTVMSDQLVPGDRINLSNDFNTNSSSSSKTSTAKSDNAERKPQEQ-----------------VTMIPCDCLILEGSAVVNEASLTGESVPQLKDEIETDGDDMSRAFDMTGRDRIHVLFSGTSLLQATN 419
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7J6QA58_PEROL (Cation_ATPase_N domain-containing protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QA58_PEROL) HSP 1 Score: 119 bits (298), Expect = 1.650e-26 Identity = 77/254 (30.31%), Postives = 122/254 (48.03%), Query Frame = 1 Query: 91 LVELPIGWPLGRYLQ----ARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRN-ANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTD 837 ++ P+ P+ +Y +GL ++V + L+G N VD+ P F+ D++ +P +F + +LWM++ YW + + +EA V +RR+ L +RN A + R GQW TV ++PGD ++L + + + S V +P D L+L G+AVV+E+SLTGESVPQ+K + ++ D S DMTGR HVL SGT+LL T+ Sbjct: 140 MLTCPMNLPISKYTNESSSTKGLLTDEVQRKQDLYGFNKVDIPVPPFYILYRDQILNPIPIFQILCCLLWMMDEYWKYTVFTFLSIFGMEAGTVF--QRRRNLLTLRNMAGKNIIPISVLRDGQWTTVMSDQLVPGDRINLSNDFNTNSSSSSKTSPAKSDNTERKPQEQ-----------------VTMIPCDCLILEGSAVVNEASLTGESVPQLKDEIETDGDDTSRSFDMTGRDRIHVLFSGTSLLQATN 374
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S2MSH4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSH4_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.060e-26 Identity = 74/245 (30.20%), Postives = 125/245 (51.02%), Query Frame = 1 Query: 94 VELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSL-KSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825 V PI +P+ Y +++GL+ EDV R+ L+G+N V V P + + ++L SP V+F +F +LWML+ YW + + +V EA +R + + + S ++ +R G+W ++ +LPGD++S + G RG A +P DL++L G+AVV+E++LTGESVPQ+K +L + + + SL++ G H H L SGT+++ Sbjct: 258 VTCPIDYPVDYYAKSQGLSSEDVQQRIDLYGKNIVRVPTPKIFQLIKEQLLSPIVIFQVFCAILWMLDEYWQYTIFTLFSIVMFEA--TTAFQRLRTFSTLGSMASKPTPLQVYRDGKWSQLTTEDLLPGDLISFTRRAPAPPPGPRGKKQRITGGPDAPAANKKS-------------AQATDAVPCDLIILSGSAVVNEATLTGESVPQMKDALKVDAHE-KKSLNVDGAHRVHTLFSGTSVV 486
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S3F7A3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F7A3_9VIRI) HSP 1 Score: 116 bits (291), Expect = 2.530e-25 Identity = 78/252 (30.95%), Postives = 117/252 (46.43%), Query Frame = 1 Query: 73 AGDSFGLVELPIGWPLGRYLQARGLALE-DVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825 +GD V P PL Y +RG A D +G+NS+++ P+F +++ P VF +F LW+L+ Y AL + +++ E V +R L R ++ A +VR +R G+W+ +S +LPGD+ L G +AA + +P D L+L GTAVV+E+SLTGES P +K + SE + L + G H SHVL SGTTL+ Sbjct: 258 SGDVVTEVLCPTDRPLAEYHASRGHATRADADGARERYGDNSLNIPTPSFAELYKEQIMGPVPVFQIFCAALWLLDEYPKYALFNMMSILAFEGSTVFTKQRNMNTL--RGMSNKAGRVRVYREGEWVELSTDALLPGDIFELACGTTAAA----------------KGGQPQQGQQDASKSPSSASAAEPNIPCDCLILSGTAVVNEASLTGESTPLVKDAAPSEGASAREPLAVDGEHKSHVLFSGTTLM 491 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8311.17317.1 >prot_L-elsbetiae_contig8311.17317.1 ID=prot_L-elsbetiae_contig8311.17317.1|Name=mRNA_L-elsbetiae_contig8311.17317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp ETDDDDDDDGGGGGGGGGGRGAEGAGDSFGLVELPIGWPLGRYLQARGLAback to top mRNA from alignment at L-elsbetiae_contig8311:783..6387- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8311.17317.1 ID=mRNA_L-elsbetiae_contig8311.17317.1|Name=mRNA_L-elsbetiae_contig8311.17317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5605bp|location=Sequence derived from alignment at L-elsbetiae_contig8311:783..6387- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8311:783..6387- >mRNA_L-elsbetiae_contig8311.17317.1 ID=mRNA_L-elsbetiae_contig8311.17317.1|Name=mRNA_L-elsbetiae_contig8311.17317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1836bp|location=Sequence derived from alignment at L-elsbetiae_contig8311:783..6387- (Laminarionema elsbetiae ELsaHSoW15)back to top |