mRNA_L-elsbetiae_contig8311.17317.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8311.17317.1
Unique NamemRNA_L-elsbetiae_contig8311.17317.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 2.060e-106
Identity = 195/285 (68.42%), Postives = 215/285 (75.44%), Query Frame = 1
Query:   58 RGA-EGAGDSFGLVELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTDGSESYGESDWSLPTGTSSAAPGSS 909
            RGA + A D+F LVELPI WPLGRYLQA GL LE   ++L LFGENSVDV+QPTFWHHL DRLTSPFVVFNLFNQVLWMLE YW KALLAI EV+ VEA+FVAD ERR+ QLDIRN+  P K+VRAWRGGQW+ + VS MLPGD+VSLK+GV + A   GS                              AF VGELPAD+LLLRGTAVV+E+SLTGESVPQIKTSLTSEPIDFED LDMTGRHS HVLLSGTTLLDQTDGS+S  +S    PT TSSAA GSS
Sbjct:  301 RGAGDEAADTFELVELPIRWPLGRYLQAGGLTLEAAGAKLRLFGENSVDVKQPTFWHHLADRLTSPFVVFNLFNQVLWMLELYWLKALLAIGEVIGVEAIFVADAERRRMQLDIRNSKKPTKRVRAWRGGQWVPIPVSSMLPGDLVSLKTGVVAVA-PEGSEVGDGQDDAKMQDEE---------------AFFVGELPADVLLLRGTAVVNEASLTGESVPQIKTSLTSEPIDFEDELDMTGRHSGHVLLSGTTLLDQTDGSDS--DSSRPSPTATSSAALGSS 567          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A6H5K3A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3A7_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 2.670e-93
Identity = 159/237 (67.09%), Postives = 179/237 (75.53%), Query Frame = 1
Query:   79 DSFGLVELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAA--GSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTG 783
            D+F LVELP  WPLGRYLQA GL LED  ++L +FGENSVDV+QPTFWHHL DRLTSPFVVFNLFNQVLWMLE YW KALLAI EV+ VEA+FVAD ERR++QLDIRN+N P K+VRAWRGGQW+ + VS MLPGD+VSLK+GV + A  GS G                               AF VGELPAD+LLLRGTAVV+E+SLTGESVPQIKTSLTSEPIDFED LD+ G
Sbjct:  405 DTFELVELPTRWPLGRYLQAGGLTLEDAVTKLRMFGENSVDVKQPTFWHHLADRLTSPFVVFNLFNQVLWMLELYWLKALLAIGEVIGVEAVFVADAERRRRQLDIRNSNKPTKRVRAWRGGQWVPIPVSSMLPGDLVSLKTGVVAVAPEGSEGGDGQDDKKGQDEE------------------AFFVGELPADVLLLRGTAVVNEASLTGESVPQIKTSLTSEPIDFEDELDIAG 623          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A836CMB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB3_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.870e-30
Identity = 86/273 (31.50%), Postives = 129/273 (47.25%), Query Frame = 1
Query:   58 RGAEGAGDSFGLVELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTDGSESYGESDWSLP 876
            RGA     +  +V+LP+  P+ RY++A GL   +   R   +G NS+ V   T     VD +  P+ VF LF+Q+L +LE +W  A ++    ++ E     +     K L    A    + V+ WR G W  +    ++PGDV++L           GS                                   ELPAD+++LRG+A+VDE++LTGE VPQ+K SL S   D   +LD+   H +H L +GTTLL  T G++     +W LP
Sbjct:  335 RGAAPHRSACTMVDLPVDLPVQRYIEAAGLGAAEARRRRARYGRNSLRVLPRTVRGTFVDNVLGPYSVFQLFSQLLGVLEQHWAHAAMSAGFTLASEWTAAYEALASSKLLSADQAARGGRPVQCWRDGAWAELPSEQLVPGDVMALAP--------EGSPM---------------------------------ELPADMVVLRGSALVDEATLTGEGVPQMKASLLSAVFDEGAALDVARAHRTHALFAGTTLLQTTPGADEEPPHEWRLP 566          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S2L323_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L323_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.650e-27
Identity = 83/238 (34.87%), Postives = 118/238 (49.58%), Query Frame = 1
Query:  115 PLGRYLQARGLALEDVPSRLGL-FGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825
            PL  + Q  G++        G+ FGEN  DV QPTF      +L SPF VF LF  VLWML+ YW  +   +  +++ EA  V    R K    +R   + A+K+R +R G W  +  + +LPGD++SL   V     +                                       +PAD+L+LRG+ VV+E+SLTGESVPQ+K  + SE ++ E  LDM  RH +HVL +GT +L
Sbjct:  109 PLNFFKQWAGISSNHQLEAAGVRFGENKFDVRQPTFKDMYKKQLLSPFTVFQLFCVVLWMLDDYWQYSAFTLFMILTFEATVVFS--RIKSLSALRGMGNTARKIRVFREGVWTKIWTTELLPGDIMSLTRSVKKKNSAEAVVDPKTETSESSEDGDV--------------------VPADVLVLRGSTVVNEASLTGESVPQMKEGI-SELVEGEH-LDMKTRHKTHVLYAGTKIL 322          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S1TUB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUB7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.870e-27
Identity = 97/248 (39.11%), Postives = 136/248 (54.84%), Query Frame = 1
Query:   94 VELPIGWPLGRYLQARGLALE-DVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSL---TSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825
            +   + +P+G Y+   GL+ E  + +    +G N+  ++ PTF    V +L SP VVF +F+  LW+L+ YW  +  +I  +   E+  V    R K    +RN  S AK V  +R  +W+ +S   +LPGD++SL    G A GS             XXXXXXXXXXXXXXXX      V    P D L+LRG+AVV+ESSLTGES+PQ+K +L        + E+ L++ G H  HVL  GT LL
Sbjct:  215 IRCKVDYPVGNYMGTSGLSSETSMRAARQKYGRNTCTLDMPTFGELYVQQLLSPLVVFQIFSSCLWLLDEYWQYSAFSIFMIFVFESTVVFS--RLKSLGTLRNMGSGAKTVSVFRRQRWMRISSDDLLPGDLLSLSLKGGKAVGSAEEGNDGGEAAAKXXXXXXXXXXXXXXXXNTEADMV----PCDALILRGSAVVNESSLTGESIPQMKAALRVDVGNAKEAEEPLNIKGTHKIHVLFGGTRLL 456          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7J6PDK4_PEROL (Cation_ATPase_N domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PDK4_PEROL)

HSP 1 Score: 121 bits (303), Expect = 6.370e-27
Identity = 77/254 (30.31%), Postives = 124/254 (48.82%), Query Frame = 1
Query:   91 LVELPIGWPLGRYLQ----ARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRN-ANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTD 837
            ++  P+  P+ +Y       +GL+ ++V  +  L+G N VD+  P F+    D++ +P  +F +   +LWM++ YW   +     +  +EA  V   +RR+  L +RN A      +   R GQW TV    ++PGD ++L +   + + S  S                                 V  +P D L+L G+AVV+E+SLTGESVPQ+K  + ++  D   + DMTGR   HVL SGT+LL  T+
Sbjct:  185 MLTCPMNLPISKYTNESSSTKGLSTDEVQRKQDLYGFNKVDIPVPPFYILYRDQILNPIPIFQILCCLLWMMDEYWKYTVFTFLSIFGMEAGTVF--QRRRNLLTLRNMAGKNIIPISVLRDGQWTTVMSDQLVPGDRINLSNDFNTNSSSSSSKTSPAKSDNAERKPQEQ----------------VTMIPCDCLILEGSAVVNEASLTGESVPQLKDEIETDGDDMSRAFDMTGRDRIHVLFSGTSLLQATN 420          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7J6M3I4_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M3I4_PEROL)

HSP 1 Score: 120 bits (301), Expect = 1.270e-26
Identity = 76/254 (29.92%), Postives = 124/254 (48.82%), Query Frame = 1
Query:   91 LVELPIGWPLGRYLQ----ARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRN-ANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTD 837
            ++  P+  P+ +Y       +GL+ ++V  +  L+G N VD+  P F+    D++ +P  +F +   +LWM++ YW   +     +  +EA  V   +RR+  L +RN A      +   R GQW+TV    ++PGD ++L +   + + S                                    V  +P D L+L G+AVV+E+SLTGESVPQ+K  + ++  D   + DMTGR   HVL SGT+LL  T+
Sbjct:  185 MLTCPMNLPISKYTNESSSTKGLSTDEVQRKQDLYGFNKVDIPVPPFYILYRDQILNPIPIFQILCCLLWMMDEYWKYTVFTFLSIFGMEAGTVF--QRRRNLLTLRNMAGKNIIPISVLRDGQWMTVMSDQLVPGDRINLSNDFNTNSSSSSKTSTAKSDNAERKPQEQ-----------------VTMIPCDCLILEGSAVVNEASLTGESVPQLKDEIETDGDDMSRAFDMTGRDRIHVLFSGTSLLQATN 419          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7J6QA58_PEROL (Cation_ATPase_N domain-containing protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QA58_PEROL)

HSP 1 Score: 119 bits (298), Expect = 1.650e-26
Identity = 77/254 (30.31%), Postives = 122/254 (48.03%), Query Frame = 1
Query:   91 LVELPIGWPLGRYLQ----ARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRN-ANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLLDQTD 837
            ++  P+  P+ +Y       +GL  ++V  +  L+G N VD+  P F+    D++ +P  +F +   +LWM++ YW   +     +  +EA  V   +RR+  L +RN A      +   R GQW TV    ++PGD ++L +   + + S                                    V  +P D L+L G+AVV+E+SLTGESVPQ+K  + ++  D   S DMTGR   HVL SGT+LL  T+
Sbjct:  140 MLTCPMNLPISKYTNESSSTKGLLTDEVQRKQDLYGFNKVDIPVPPFYILYRDQILNPIPIFQILCCLLWMMDEYWKYTVFTFLSIFGMEAGTVF--QRRRNLLTLRNMAGKNIIPISVLRDGQWTTVMSDQLVPGDRINLSNDFNTNSSSSSKTSPAKSDNTERKPQEQ-----------------VTMIPCDCLILEGSAVVNEASLTGESVPQLKDEIETDGDDTSRSFDMTGRDRIHVLFSGTSLLQATN 374          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S2MSH4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSH4_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.060e-26
Identity = 74/245 (30.20%), Postives = 125/245 (51.02%), Query Frame = 1
Query:   94 VELPIGWPLGRYLQARGLALEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSL-KSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825
            V  PI +P+  Y +++GL+ EDV  R+ L+G+N V V  P  +  + ++L SP V+F +F  +LWML+ YW   +  +  +V  EA      +R +    + +  S    ++ +R G+W  ++   +LPGD++S  +       G RG                               A     +P DL++L G+AVV+E++LTGESVPQ+K +L  +  + + SL++ G H  H L SGT+++
Sbjct:  258 VTCPIDYPVDYYAKSQGLSSEDVQQRIDLYGKNIVRVPTPKIFQLIKEQLLSPIVIFQVFCAILWMLDEYWQYTIFTLFSIVMFEA--TTAFQRLRTFSTLGSMASKPTPLQVYRDGKWSQLTTEDLLPGDLISFTRRAPAPPPGPRGKKQRITGGPDAPAANKKS-------------AQATDAVPCDLIILSGSAVVNEATLTGESVPQMKDALKVDAHE-KKSLNVDGAHRVHTLFSGTSVV 486          
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Match: A0A7S3F7A3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F7A3_9VIRI)

HSP 1 Score: 116 bits (291), Expect = 2.530e-25
Identity = 78/252 (30.95%), Postives = 117/252 (46.43%), Query Frame = 1
Query:   73 AGDSFGLVELPIGWPLGRYLQARGLALE-DVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEAYWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQWITVSVSGMLPGDVVSLKSGVGSAAGSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEPIDFEDSLDMTGRHSSHVLLSGTTLL 825
            +GD    V  P   PL  Y  +RG A   D       +G+NS+++  P+F     +++  P  VF +F   LW+L+ Y   AL  +  +++ E   V   +R    L  R  ++ A +VR +R G+W+ +S   +LPGD+  L  G  +AA                                   +     +P D L+L GTAVV+E+SLTGES P +K +  SE     + L + G H SHVL SGTTL+
Sbjct:  258 SGDVVTEVLCPTDRPLAEYHASRGHATRADADGARERYGDNSLNIPTPSFAELYKEQIMGPVPVFQIFCAALWLLDEYPKYALFNMMSILAFEGSTVFTKQRNMNTL--RGMSNKAGRVRVYREGEWVELSTDALLPGDIFELACGTTAAA----------------KGGQPQQGQQDASKSPSSASAAEPNIPCDCLILSGTAVVNEASLTGESTPLVKDAAPSEGASAREPLAVDGEHKSHVLFSGTTLM 491          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8311.17317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD5_ECTSI2.060e-10668.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3A7_9PHAE2.670e-9367.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CMB3_9STRA4.870e-3031.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2L323_9STRA1.650e-2734.87Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1TUB7_9STRA1.870e-2739.11Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7J6PDK4_PEROL6.370e-2730.31Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A7J6M3I4_PEROL1.270e-2629.92Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
A0A7J6QA58_PEROL1.650e-2630.31Cation_ATPase_N domain-containing protein n=2 Tax=... [more]
A0A7S2MSH4_9STRA3.060e-2630.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3F7A3_9VIRI2.530e-2530.95Hypothetical protein n=1 Tax=Prasinoderma singular... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8311contigL-elsbetiae_contig8311:783..6387 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.8
Seed ortholog evalue1.6e-94
Seed eggNOG ortholog2880.D8LFD5
KEGG koko:K14950
KEGG TC3.A.3.10
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001709,GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008324,GO:0009267,GO:0009555,GO:0009605,GO:0009846,GO:0009856,GO:0009888,GO:0009987,GO:0009991,GO:0010073,GO:0010152,GO:0012505,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016036,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0021700,GO:0022414,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030154,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0033554,GO:0034220,GO:0042592,GO:0042594,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044706,GO:0045165,GO:0046873,GO:0048229,GO:0048507,GO:0048856,GO:0048863,GO:0048865,GO:0048867,GO:0048869,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071496,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099131,GO:0099132
EggNOG free text desc.calcium-transporting ATPase activity
EggNOG OGsCOG0474@1,KOG0209@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons6
Model size919
Cds size918
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8311.17317.1prot_L-elsbetiae_contig8311.17317.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8311 784..6387 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816914.3867965-CDS-L-elsbetiae_contig8311:783..9181622816914.3867965-CDS-L-elsbetiae_contig8311:783..918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 784..918 -
1691683908.4646206-CDS-L-elsbetiae_contig8311:783..9181691683908.4646206-CDS-L-elsbetiae_contig8311:783..918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 784..918 -
1622816914.3971624-CDS-L-elsbetiae_contig8311:1298..15201622816914.3971624-CDS-L-elsbetiae_contig8311:1298..1520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 1299..1520 -
1691683908.4755604-CDS-L-elsbetiae_contig8311:1298..15201691683908.4755604-CDS-L-elsbetiae_contig8311:1298..1520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 1299..1520 -
1622816914.4073322-CDS-L-elsbetiae_contig8311:3099..32381622816914.4073322-CDS-L-elsbetiae_contig8311:3099..3238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 3100..3238 -
1691683908.484328-CDS-L-elsbetiae_contig8311:3099..32381691683908.484328-CDS-L-elsbetiae_contig8311:3099..3238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 3100..3238 -
1622816914.4196968-CDS-L-elsbetiae_contig8311:3866..40091622816914.4196968-CDS-L-elsbetiae_contig8311:3866..4009Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 3867..4009 -
1691683908.4930494-CDS-L-elsbetiae_contig8311:3866..40091691683908.4930494-CDS-L-elsbetiae_contig8311:3866..4009Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 3867..4009 -
1622816914.4300456-CDS-L-elsbetiae_contig8311:4518..46721622816914.4300456-CDS-L-elsbetiae_contig8311:4518..4672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 4519..4672 -
1691683908.5044703-CDS-L-elsbetiae_contig8311:4518..46721691683908.5044703-CDS-L-elsbetiae_contig8311:4518..4672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 4519..4672 -
1622816914.4437392-CDS-L-elsbetiae_contig8311:6262..63871622816914.4437392-CDS-L-elsbetiae_contig8311:6262..6387Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 6263..6387 -
1691683908.513715-CDS-L-elsbetiae_contig8311:6262..63871691683908.513715-CDS-L-elsbetiae_contig8311:6262..6387Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8311 6263..6387 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8311.17317.1

>prot_L-elsbetiae_contig8311.17317.1 ID=prot_L-elsbetiae_contig8311.17317.1|Name=mRNA_L-elsbetiae_contig8311.17317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
ETDDDDDDDGGGGGGGGGGRGAEGAGDSFGLVELPIGWPLGRYLQARGLA
LEDVPSRLGLFGENSVDVEQPTFWHHLVDRLTSPFVVFNLFNQVLWMLEA
YWTKALLAIAEVVSVEAMFVADTERRKKQLDIRNANSPAKKVRAWRGGQW
ITVSVSGMLPGDVVSLKSGVGSAAGSRGSGGGGDDGKDGEGVGDDDEEEE
KEKADAAAAAFVVGELPADLLLLRGTAVVDESSLTGESVPQIKTSLTSEP
IDFEDSLDMTGRHSSHVLLSGTTLLDQTDGSESYGESDWSLPTGTSSAAP
GSSALP
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mRNA from alignment at L-elsbetiae_contig8311:783..6387-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8311.17317.1 ID=mRNA_L-elsbetiae_contig8311.17317.1|Name=mRNA_L-elsbetiae_contig8311.17317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5605bp|location=Sequence derived from alignment at L-elsbetiae_contig8311:783..6387- (Laminarionema elsbetiae ELsaHSoW15)
GAAACAGACGACGACGACGACGACGACGGTGGCGGTGGCGGCGGTGGCGG TGGTGGCCGCGGCGCTGAGGGAGCCGGGGATAGTTTCGGGCTCGTGGAGC TGCCGATAGGGTGGCCCCTTGGACGGTGAGAGCGGCAAAAGCCAGAGGCA GGCTTTGTGTAGGGCCGGAGGAAAGGCGCGGCAGTGCCTGCAACCGAGTG TGGGGGGGTCGGGGGGCCAACACACCCTCGTAGAATCGACGGTGAAAGGA TATGAATATTCGCACACGCTACGTACCACCTCTCGCAACAGCGCCCCCGG GAAATCGGGTGCGGTAAATGGTGGCACGCCAGGCTTCCACTTGAGGTTGA GTGTGGTTTTGAACGCGCTGGCGTTGGTTGACCTCTCACGTTCCGCTTAT CGCCGGGCATGGCTCTCTGGGGTGCTTAAATATACGTATGTAGCGCGTAA AAGAGTCCTGTGTATGTAGAGAGAGGTGACCTCCCGTTTGGGTTGTGGTA CACCTGTGATTTGTCGCCGGCAGAACACGTCGTGCGTGCATGATGCTTCT GGGGGAATGACCTCAGCCGTTTCCTAGGGGTTGATGGCCGATCCGGAGTA CTCCATGTATGCAGGTTCGATGGGAACTTCTCTACAAAGCCAGGACGTAA AGAGAGAGTTTTCCTACATTTGCCGCGCAGGCGCCCCCTTTTTCAAAGCA TTGGCTGCCGGAGATGAACCGAGATTTTCCCCCCCCCCCCCCCCCCCTGG ACAGATTTTCAAAGCTCGATCCTTCCCCAGGGGGTGGCGTTGGAAATATC TGGTCGAGGGCTGTTCGAAAATGCGTCGTTTGGTGCTGGCGCCCTCTTTA TTACGGAGTAATCGAGCTTTGAAAATATGTCCAGGGGGGGGGGGGGGGTA TGCTGAGTCATTTACGGAAGTCTATCGATGTATATACCTTCGCGCTTGTT CCGAAGCGTTCGGCTAGTGCTATTTAGTTTTCAGCATAATTAGAAGTGCA CCGTCGGGGTGCTATTTTCTTACTCCCGCTGGCAAATGTACCGTAGGTGA CTCAAGATACCACCCCCCCCTGGACCGACCTTTAGAGCTCCGTAACGAAG AGTTTGCCAGCACCAAGCGACACACTTTCGAACAGCCCCTCGACTAGATA TTTCCAACGCCACGCCCCTTGCGGCACTGGCACTCTTCTTGCTGGGGAGG GATCGATCGAGCTTTGAAAATCTGTCCAGGGGGGTGGTATCTGGTGTCAC CTACGGTATCCCGCCGCCTCCCGTTTGCCCGCGCCCCTTTCTCTCTTTCG GTGCGGTTCAATTAGCACTTCACGGCGAACTCACGCTTCATATCGGAGCT ATGCAACGCACGTGTGCCTGGTCTCAAGACTCCAGCCGAAGCTTTATGTC TTCGGATGTCACAGTCTTGGGCTTTTTATGACTCGCGTGCACCCCCCCCC CCCCCCCCCCCCACCCCACCCGCGCGAAGGACGTCGTCTCTCGTCCCCTC CGCGGCCTGCTCTGTCCCTTTCTGTCTCTCTCATANNNNNNNNNNGGGTG CCTGGTCTCAAGCCCCCCGCCGAAGTTTTTTTTTTTTGGGTTTCCCCGTT TTGGGTTTTTTTTTCCCCGCGGCCCCCCCCCCCCCCCCCCCCTATAACGC GTTGCTGAAGAGTGTTCGTTGCCTCTCTATTGTGTGTACGTCTTTTTCTC TCTACACCTGAATAGGTATCTCCAGGCCCGCGGCCTGGCGTTGGAAGACG TTCCGTCGAGGCTGGGATTGTTCGGGGAAAATTCCGTGGACGTGGAGCAG CCCACCTTCTGGCATCACCTGGTCGATAGGCTCACGAGCCCGTTCGTCGT GTTCAACCTCTTCAACCAGGCAGGGGAATTGCTCAGCGTAGCTGGGGGAC CGAACTTTAGCTGTGTGTTTATATGACATACGTCCATCTCTTATTAGAGC CAGAGATGTTAGGTACAGGTGTTGGGACCAACTCGCCAGAAACCACCTTT TCGCGGAGTTGCCCTCGTGTTTGTTCTTGGTGTTTTGTCACTGCCAGCCT TTTTCTCGTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTGGTTGGTCTTGG GTGTGTGTGAAGTGCTTCGAGTAAGCTGTATTGTAAGAACAACGTGCGGC ATCCGGGGGGTACTACCCACGTACCCCACCCAAGCACGTACGTGTATCTG TTGGCACCCATCCTGGGCACGTGGAGGCGAGAGCCCAGGACTCTTTTTTG AAGAATCCGACCAACACCCCTCCTCCGCCCGCACACTCTGACTTGTCGTC CCGGCCTCCTCCTTGCGCCGTGCGGGGGCGCCGTGCGTGCGTGCACACCC CCACCCCCACCCCCACCCCCCTGCGCAGGTCCTCTGGATGCTGGAGGCGT ACTGGACGAAGGCCCTCCTGGCGATCGCGGAAGTCGTCAGCGTCGAGGCG ATGTTCGTGGCCGACACAGAGAGGAGGAAGAAGCAGCTCGATATCCGGAA CGCGAACAGTCCCGCCAAGAAGTAATAAGCCTGGATCGGGATTTCGATCG TTTCGTTTCGTTTCATTTCGTTTCGTTTTTCGTTTCGTTTCGTTTCATTT CGTTTCGTTTCGTTTCGCTTCGCTTCGCTTCGCTTCGTTTCGTTTCGTTT CGTTTCGTTTCGTTTCGTTTCGCTTCGTTTTTTTTTTCGGCGCTTCGTCC ATTCGCCCCCTCCCATATGGCCTTTTTGAGGACCGGGCACTTGTTGCGGG GCACCGATAGTCTCCTTTTCGCGTGTTGTATTGTAATACTTGGTTGGCGT TAAGGGTGCACTTGTTTCTGTGTGTGATTTATGTACATAGTCGTGGTATA GGTAAATAGCCAGTAATGTTTCTTTGCGTTCTGTTTTTTTGCATTTTGTG CATGATGTCTATGCATGTACCATTTGCCCTCGATATATATATTTTTTGTT TTTGTGCGATTTTGCTTGCGATCTTGTGGTCACACGATCACTGCGGTCGT GCTGTCTCGTCGCTCTTCCCGCTGCACGAACGCACCCCCCCCCTCGATCC TGTATTATTCAGGCCTTACCCCCTACCGAATTCATGCCGTCTCTTCGCTG TTCCCGCTGCATGAAATCACGCCACGGCTCATGGATACAACCATTGAAGG GTGAGGGCATGGCGAGGGGGCCAGTGGATCACCGTCTCCGTGTCAGGTAT GCTCCCCGGCGACGTGGTTTCTCTTAAGTCGGGCGTCGGCAGCGCTGCTG GAAGCCGGGGCAGTGGCGGCGGCGGCGATGACGGCAAGGTAAGCAGAGGC TACATGATCTAGTTTGTGTCCGTCCGCAAGGGGGTTTCGAGGCTTCCATC TGGCGTTATCTTTCTCCCCCTGCCATCCCCCGCTGCCCACTCTCCCGGAC TCTTTGCGTTGTTGCTTGGTGTCGTCGTCATCGTGGTCGTCGTCGTCGTC GTCGTCGTTGTCGTCGTTGTTGTTGTTGCTGCTGTTGTGTGTTGAGGTTC TCGTGGCGCCGGTTGGTTACGTAGCGGACGGAGCGATCGAAACAGTGGAT CGATAGCCCACGGGGTGTGAGATTGTTTTGGAACCATCCTTGCAGTGCAC ACAAAACAGACCAAGCATTCACCTCACGGAAGGACGCACGTAGGGGTACG AGTAGAGAGGGGTGGGAATAGCGAGTGTGCTCAAACCCTGCAGAGCAGAC GGTGCGGCAGGCGCCATACCCCGCGCAAGAGTCCCACACGCGTACATAAG TCCTAAAAAAACAAATGTTTTTGTGTTTGGGGGGCTATGTACCGCACCAC AACGGGCCGCAATCTAGGGCTACTGGGAGAAAGGGCATCTTGAAAAGCCA TGTGCGGGGTATTCGACACACGATAACACACCCCCTGGACCGATTTTCGA AGCTCGGCTACTCCGCAGCGAGTATGTATGATTCTATCACTAAAGGGCAC ATTTTCGGGTAGCTCTTGATGAGACCTTTCCAACGCCGCCCTTTTCGGGA CTGACTCTCTTCTCGCCTTGGAGCAGTTGAGCTTCGAAGTTTGGCCCAGG GGGGTGTTTTGTCTTGTGCCGTACACGGCGGGAGCCTTCAATTGTTGTGG AACGCTTATTTCTGCGGATGATCCCACCCTTGACGGCGGTGTTCCTTCCT GCCTCACGCAAGGCATTATATATATTGTTGTTGTTGTTGTTGTCGTTGTC GTTGTCGTTGTCGTTGTTGTGGTTGTTTTCTTCACATTAGAAACCGTTCC GATCTCTCCATCCAGTACCTCCGTACGCCCGTACTCACCAAACACCCGAC GCGGTCGATTCCTGTGGTCACAGGCTAACTCTTACCCTAAGAAAGGGTGC ACTGAAAAATAAAAAGTTGGATCCGAAAGGGCGTCAGGAAAGCATAAAAA CAAAAGCAACGACACAGATAGTCGGGAGCCCTTCGCTCCGCTCTACACGC TATGTGAGGTAGAAACAACAACTGGAACGTCCAACATCCTATCTATCTTG GTGCCCCAACAATGTACCGTAGGTGACACAAGATAGCACACCCCCTGGAC CGAATTTTAGAGCCCCTTTAGTCCGTAACGAAGAGGGTGGCCAGCACCAA ACAGCACATTTTCGTACAGCCGTCGACTAGATCTTTCCAACGCCACCCCC TTGAGGCACTGGCACTTCTCCTTCCTGGGGAGTATATTACTTTTGAGCTT TGAAAATCTGTCCAGGGGGTGTGGTATCTTGCATCACCTACGGTATATAT TTACACATATATGCACAGCGGTGTAAGAACGATCGCGACATTGCCGGCTC GGCTCATCGCCCTATTTTCTTTCGGGCTGGTATGTATGTATGGTACCATT TTGTTTTTGATTTTAAGGATGGCGAAGGCGTTGGGGACGACGACGAGGAG GAGGAGAAAGAAAAGGCCGACGCCGCCGCGGCCGCGTTTGTGGTCGGGGA GCTCCCGGCGGACCTGTTGCTGCTGAGAGGCACGGCCGTGGTTGATGAGT CCAGCCTCACTGGCGAAAGTGTCCCGCAGATCAAGACGTCCTTGACCTCG GAGCCGATAGACTTCGAGGACAGCCTCGACATGACCGGGGTGAGTTGGAG ATGTGTTGTTGTTGTTGTTGCTGTAATTGTTGTTGTTGTTGTTGTTGCTG TTGTTGTTGTTGTTGTTGTTGCTGCTGCTGTTGCTGTTGTTGTGTTGTTG TTGTGTTGTTGTTGTGCCGGTCTATATTTCGTTTTGGGCCACCTGCTTGC GACAATTTTGCGTGTTTTATTCTGCCTGCAAGAATGCGCCTCTCTCGTCA TCGCAAGCTACTACCCAATCCCATTTCAAAACGACTTGCTCTGTTATTCG TCACGCCCCCCGTCAAGGGAGAATAAATCTCCTTAAAATAAGCGTTTTCC CCCCGCAACGCACGTTTTTGCACCGGTCTGAACCTGCCTGCGCATCTGGC GGCTTCAAACGCGCCCCAGAGGCACTCCAGCCACGTTTTGCTGAGCGGCA CGACCTTGCTGGACCAGACGGACGGTAGCGAGAGCTACGGCGAATCTGAT TGGTCGCTTCCAACCGGCACGAGTTCCGCCGCCCCCGGGTCGTCCGCTCT GCCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8311:783..6387-

>mRNA_L-elsbetiae_contig8311.17317.1 ID=mRNA_L-elsbetiae_contig8311.17317.1|Name=mRNA_L-elsbetiae_contig8311.17317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1836bp|location=Sequence derived from alignment at L-elsbetiae_contig8311:783..6387- (Laminarionema elsbetiae ELsaHSoW15)
GAAACAGACGACGACGACGACGACGACGGTGGCGGTGGCGGCGGTGGCGG
TGGTGGCCGCGGCGCTGAGGGAGCCGGGGATAGTTTCGGGCTCGTGGAGC
TGCCGATAGGGTGGCCCCTTGGACGGAAACAGACGACGACGACGACGACG
ACGGTGGCGGTGGCGGCGGTGGCGGTGGTGGCCGCGGCGCTGAGGGAGCC
GGGGATAGTTTCGGGCTCGTGGAGCTGCCGATAGGGTGGCCCCTTGGACG
GTATCTCCAGGCCCGCGGCCTGGCGTTGGAAGACGTTCCGTCGAGGCTGG
GATTGTTCGGGGAAAATTCCGTGGACGTGGAGCAGCCCACCTTCTGGCAT
CACCTGGTCGATAGGCTCACGAGCCCGTTCGTCGTGTTCAACCTCTTCAA
CCAGGTATCTCCAGGCCCGCGGCCTGGCGTTGGAAGACGTTCCGTCGAGG
CTGGGATTGTTCGGGGAAAATTCCGTGGACGTGGAGCAGCCCACCTTCTG
GCATCACCTGGTCGATAGGCTCACGAGCCCGTTCGTCGTGTTCAACCTCT
TCAACCAGGTCCTCTGGATGCTGGAGGCGTACTGGACGAAGGCCCTCCTG
GCGATCGCGGAAGTCGTCAGCGTCGAGGCGATGTTCGTGGCCGACACAGA
GAGGAGGAAGAAGCAGCTCGATATCCGGAACGCGAACAGTCCCGCCAAGA
AGTCCTCTGGATGCTGGAGGCGTACTGGACGAAGGCCCTCCTGGCGATCG
CGGAAGTCGTCAGCGTCGAGGCGATGTTCGTGGCCGACACAGAGAGGAGG
AAGAAGCAGCTCGATATCCGGAACGCGAACAGTCCCGCCAAGAAGGTGAG
GGCATGGCGAGGGGGCCAGTGGATCACCGTCTCCGTGTCAGGTATGCTCC
CCGGCGACGTGGTTTCTCTTAAGTCGGGCGTCGGCAGCGCTGCTGGAAGC
CGGGGCAGTGGCGGCGGCGGCGATGACGGCAAGGGTGAGGGCATGGCGAG
GGGGCCAGTGGATCACCGTCTCCGTGTCAGGTATGCTCCCCGGCGACGTG
GTTTCTCTTAAGTCGGGCGTCGGCAGCGCTGCTGGAAGCCGGGGCAGTGG
CGGCGGCGGCGATGACGGCAAGGATGGCGAAGGCGTTGGGGACGACGACG
AGGAGGAGGAGAAAGAAAAGGCCGACGCCGCCGCGGCCGCGTTTGTGGTC
GGGGAGCTCCCGGCGGACCTGTTGCTGCTGAGAGGCACGGCCGTGGTTGA
TGAGTCCAGCCTCACTGGCGAAAGTGTCCCGCAGATCAAGACGTCCTTGA
CCTCGGAGCCGATAGACTTCGAGGACAGCCTCGACATGACCGGGGATGGC
GAAGGCGTTGGGGACGACGACGAGGAGGAGGAGAAAGAAAAGGCCGACGC
CGCCGCGGCCGCGTTTGTGGTCGGGGAGCTCCCGGCGGACCTGTTGCTGC
TGAGAGGCACGGCCGTGGTTGATGAGTCCAGCCTCACTGGCGAAAGTGTC
CCGCAGATCAAGACGTCCTTGACCTCGGAGCCGATAGACTTCGAGGACAG
CCTCGACATGACCGGGAGGCACTCCAGCCACGTTTTGCTGAGCGGCACGA
CCTTGCTGGACCAGACGGACGGTAGCGAGAGCTACGGCGAATCTGATTGG
TCGCTTCCAACCGGCACGAGTTCCGCCGCCCCCGGGTCGTCCGCTCTGCC
TAGGCACTCCAGCCACGTTTTGCTGAGCGGCACGACCTTGCTGGACCAGA
CGGACGGTAGCGAGAGCTACGGCGAATCTGATTGGTCGCTTCCAACCGGC
ACGAGTTCCGCCGCCCCCGGGTCGTCCGCTCTGCCT
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