mRNA_L-elsbetiae_contig831.17312.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig831.17312.1
Unique NamemRNA_L-elsbetiae_contig831.17312.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: D7G1A9_ECTSI (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1A9_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 6.220e-84
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTRRPPAVVSGPEILERFVGSSEANIRALFDYPPDVPGGDEREQEEALHVIVMDEFDSIGQRRGGGDDGGDRVRDSVVNQ 426
            GD LGVGGLDEELEEIRRRVCVPLAAP +LLEDLGISPVRG+LL+GPPGCGKTLLARRLSAALT RPPAVVSGPEILERFVGSSEANIRALFDYPPDVPGGDE EQ EALHVIVMDEFDSIGQRRGGGDDGGDRVRDSVVNQ
Sbjct:  186 GDSLGVGGLDEELEEIRRRVCVPLAAPADLLEDLGISPVRGLLLHGPPGCGKTLLARRLSAALTPRPPAVVSGPEILERFVGSSEANIRALFDYPPDVPGGDESEQAEALHVIVMDEFDSIGQRRGGGDDGGDRVRDSVVNQ 327
[Close]
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A835ZD05_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD05_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.570e-55
Identity = 94/136 (69.12%), Postives = 112/136 (82.35%), Query Frame = 1 
Query:   25 LDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTRRPPAVVSGPEILERFVGSSEANIRALFDYPPDVPGGDEREQEEALHVIVMDEFDSIGQRR--GGGDDGGDRVRDSVVNQ 426
            +D  +E IRRRV VPL+AP +LLEDLG++PV G+LL+GPPGCGK+LLARRL+  LT RPP  VSGPEIL+RFVGSSEAN+R+LFD+PP +P G     EEALHVIV+DEFD+I  RR  GGG DG +RVRDSVVNQ
Sbjct:    1 MDNVVEAIRRRVWVPLSAPKDLLEDLGVAPVSGLLLHGPPGCGKSLLARRLTEILTPRPPTFVSGPEILDRFVGSSEANVRSLFDFPPPLPAGVPG-AEEALHVIVLDEFDAIAGRRSAGGGGDGSERVRDSVVNQ 135
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BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A7S2CI58_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI58_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.830e-52
Identity = 90/150 (60.00%), Postives = 109/150 (72.67%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAP---PELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTRRPPAVVSGPEILERFVGSSEANIRALFDYPPDVPGGDEREQEEALHVIVMDEFDSIGQRRGGGDDGG-----DRVRDSVVNQ 426
            G  LG+GGL+  ++E+RRRV +P+ A    PELL DLG+ PV+G+LL+GPPGCGK+LLARRLS  LT RPP+ VSGPE+L+RFVGSSEAN+R LF   P  P     E  EALH+IV DEFD++G  RGGG   G     D VRDSVVNQ
Sbjct:   18 GSDLGIGGLEHVIDELRRRVMIPIVASTRDPELLADLGVRPVKGLLLHGPPGCGKSLLARRLSKILTPRPPSFVSGPELLDRFVGSSEANVRELFSSAPPCP-----EMPEALHIIVFDEFDALGSPRGGGVQSGGGGTVDSVRDSVVNQ 162
[Close]
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A7S4HYK5_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYK5_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.920e-48
Identity = 89/156 (57.05%), Postives = 114/156 (73.08%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALT-RRPPAVVSGPEILERFVGSSEANIRALFDYPPDV--------PGGDEREQEEALHVIVMDEFDSIGQRRGGGDDGGDR-----VRDSVVNQ 426
            G+ LG+GGLD+ L +++RRV VPLAAPP LL +LGI+PVRG+L YG PGCGKTLLAR L   L+  RP  VVSGPEI+++FVGSSEAN+RA+FD PPD+        P   +  ++ +LHV+VMDEFD++ + RGGG   GD+      RDSVVNQ
Sbjct:  256 GETLGIGGLDDVLAQVKRRVWVPLAAPPSLLSELGINPVRGLLFYGGPGCGKTLLARSLGKILSPARPVTVVSGPEIMDKFVGSSEANLRAIFDQPPDIYDSYRIGQPDDGKALEKASLHVVVMDEFDAVARSRGGGSGKGDQGDAGVARDSVVNQ 411
[Close]
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A6U1VPK6_TRICV (Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1VPK6_TRICV)

HSP 1 Score: 162 bits (409), Expect = 6.490e-48
Identity = 90/163 (55.21%), Postives = 111/163 (68.10%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALT-RRPPAVVSGPEILERFVGSSEANIRALFDYPPDV--------PGGDEREQEEALHVIVMDEFDSIGQRRGG------------GDDGGDRVRDSVVNQ 426
            G+ LG+GGLD+ L+ ++RRV VPLAAPP LL +L ISPVRG+LL+G PGCGKTLLAR L   L+  RP  VVSGPEI++RFVGSSEAN+R +FD PPD+        P   +   + ALHV++MDEFD+I + RGG            GD G    RDSVVNQ
Sbjct:   31 GETLGIGGLDDVLQTVKRRVWVPLAAPPSLLRELNISPVRGLLLHGAPGCGKTLLARGLGRILSPARPTTVVSGPEIMDRFVGSSEANLREIFDNPPDIYDTYRIDQPDNGDAIAKAALHVVIMDEFDAIARSRGGSGGXXXSSKNSQGDAG--VARDSVVNQ 191
[Close]
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A1E7FEJ6_9STRA (Vesicle-fusing ATPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEJ6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.640e-47
Identity = 88/156 (56.41%), Postives = 108/156 (69.23%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTR-RPPAVVSGPEILERFVGSSEANIRALFDYPPDV--------PGGDEREQEEALHVIVMDEFDSIGQRRGGGDDGGDR-----VRDSVVNQ 426
            G  LGVGGLD+ LE+I+RR+  PLAAPP+LL +LGI P RG+LLYG PGCGK+LLA  L + L+  RP  V+SGPEIL++FVGSSE N+R +FD PPD+          G E     ALHVIVMDEFD++ + RGG D  G +      RDSVVNQ
Sbjct:   13 GQTLGVGGLDDVLEQIKRRIWTPLAAPPKLLAELGIHPARGLLLYGKPGCGKSLLASTLGSMLSPFRPITVISGPEILDKFVGSSEKNLRDIFDNPPDIYDKFRLDETDGGELINSAALHVIVMDEFDAVARSRGGSDGKGGQGDAGVARDSVVNQ 168
[Close]
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A835YZG3_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.880e-46
Identity = 95/173 (54.91%), Postives = 113/173 (65.32%), Query Frame = 1 
Query:    4 DILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTRRPPAVVSGPEILERFVGSSE------------------------------ANIRALFDYPPDVPGGDEREQEEALHVIVMDEFDSIGQRRG--GGDDGGDRVRDSVVNQ 426
            + L VGGLD  +E IRRRV +PL AP  LL+DLGI+PV G+LL+GPPGCGK+LLARRLSA L+ RPP+ VSGPEI++RFVGSSE                              ANIR+LF YPP   GG     ++ALHVIV+DEFD+I   R   GG D G+RVRDSVVNQ
Sbjct:   55 EALQVGGLDHVVEAIRRRVWLPLCAPQPLLDDLGIAPVIGLLLHGPPGCGKSLLARRLSALLSPRPPSFVSGPEIMDRFVGSSERHKRCRSLPPTSASQSRTFCALLHCRTNAQANIRSLFKYPPRPLGGTPY-PDDALHVIVLDEFDAIAGSRSDRGGGDAGERVRDSVVNQ 226
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BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A7S3L8A9_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8A9_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.520e-45
Identity = 89/157 (56.69%), Postives = 111/157 (70.70%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTR-RPPAVVSGPEILERFVGSSEANIRALFDYPPDV---------PGGDEREQEEALHVIVMDEFDSIGQRRGGGDDGGDR-----VRDSVVNQ 426
            G+ LG+GGLD+ L E++RR+ +PLAAPP+LL++LGI PVRG+LLYG PGCGKTLLAR+L   L+  RP  VVSGPE+L++FVGSSE N+RA+FD PPD+           GD   Q  ALHV+VMDEFD+I + RGG             RDSVVNQ
Sbjct:  239 GEKLGIGGLDDVLAEVKRRIWIPLAAPPQLLQELGIHPVRGLLLYGRPGCGKTLLARKLGQMLSPLRPITVVSGPEVLDKFVGSSEKNLRAIFDSPPDIYDFFRIGEADNGDGLAQ-AALHVVVMDEFDAIARTRGGSGXXXXXXXAGVARDSVVNQ 394
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BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: K0T1G7_THAOC (Vesicle-fusing ATPase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1G7_THAOC)

HSP 1 Score: 166 bits (421), Expect = 1.790e-45
Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTR-RPPAVVSGPEILERFVGSSEANIRALFDYPPDVPGGDEREQEE-----ALHVIVMDEFDSIGQRRGG----GDDGGDR--VRDSVVNQ 426
            G  LGVGGLD+ L +I+RRV +PLAAPP LL +LGI PVRG+LLYG PGCGKTLLAR+L + L+  RP  +VSGPEIL++FVGSSE N+R +FD PPD+    ++   E     A+HVIV+DEFD+I +RRGG    G D GD    RDSVVNQ
Sbjct:  246 GSALGVGGLDDVLSQIQRRVWIPLAAPPTLLNELGIQPVRGLLLYGSPGCGKTLLARKLGSILSPCRPITIVSGPEILDKFVGSSEQNLREIFDKPPDLYPQYKKNYGEPLATQAIHVIVLDEFDAISRRRGGSGGKGSDQGDAGVARDSVVNQ 399
[Close]
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Match: A0A7S2YHQ5_9STRA (Vesicle-fusing ATPase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHQ5_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.510e-45
Identity = 88/156 (56.41%), Postives = 107/156 (68.59%), Query Frame = 1 
Query:    1 GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGCGKTLLARRLSAALTR-RPPAVVSGPEILERFVGSSEANIRALFDYPPDV--------PGGDEREQEEALHVIVMDEFDSIGQRRGGGDDGGDR-----VRDSVVNQ 426
            G  LG+GGLD+ L E++RRV  PLAAPP+LL++LGISPVRG+LLYG PGCGKTLLAR+L   L+  RP  VVSGPE+L++FVGSSE N+R +FD PPD+        P         ALHV+VMDEFD+I + RGG             RDSVVNQ
Sbjct:   49 GASLGIGGLDDVLAEVKRRVWTPLAAPPQLLQELGISPVRGLLLYGRPGCGKTLLARQLGQILSPLRPITVVSGPEVLDKFVGSSEKNLREIFDNPPDIYDYFRIGEPDNGAAVASAALHVVVMDEFDAIARARGGXXXXXXXXXXGVARDSVVNQ 204
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig831.17312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1A9_ECTSI6.220e-8494.37Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835ZD05_9STRA3.570e-5569.12Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2CI58_9STRA5.830e-5260.00Vesicle-fusing ATPase (Fragment) n=1 Tax=Dictyocha... [more]
A0A7S4HYK5_9STRA5.920e-4857.05Vesicle-fusing ATPase (Fragment) n=1 Tax=Odontella... [more]
A0A6U1VPK6_TRICV6.490e-4855.21Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres c... [more]
A0A1E7FEJ6_9STRA4.640e-4756.41Vesicle-fusing ATPase n=1 Tax=Fragilariopsis cylin... [more]
A0A835YZG3_9STRA6.880e-4654.91Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3L8A9_9STRA1.520e-4556.69Vesicle-fusing ATPase (Fragment) n=1 Tax=Amphora c... [more]
K0T1G7_THAOC1.790e-4559.74Vesicle-fusing ATPase n=1 Tax=Thalassiosira oceani... [more]
A0A7S2YHQ5_9STRA4.510e-4556.41Vesicle-fusing ATPase n=1 Tax=Amphiprora paludosa ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig831contigL-elsbetiae_contig831:11584..12265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score268.1
Seed ortholog evalue2.4e-69
Seed eggNOG ortholog2880.D7G1A9
KEGG koko:K06027
KEGG TC1.F.1.1
KEGG Pathwayko04138,ko04721,ko04727,ko04962,map04138,map04721,map04727,map04962
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000502,GO:0000731,GO:0002020,GO:0002082,GO:0002790,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006897,GO:0006909,GO:0006914,GO:0006919,GO:0006928,GO:0006950,GO:0006974,GO:0007034,GO:0007041,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009306,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033554,GO:0034098,GO:0034214,GO:0034404,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036435,GO:0036503,GO:0036513,GO:0040011,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045732,GO:0045838,GO:0045862,GO:0045935,GO:0045937,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046903,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0051788,GO:0051881,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0060828,GO:0061134,GO:0061136,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098657,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000116,GO:2000152,GO:2000158,GO:2001056,GO:2001169,GO:2001171
EggNOG free text desc.SNARE complex disassembly
EggNOG OGsCOG0464@1,KOG0741@2759
EC3.6.4.6
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Ec32 ortholog descriptionAAA ATpase
Ec32 orthologEc-12_005180.1
Exons2
Model size429
Cds size429
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816914.0500345-CDS-L-elsbetiae_contig831:11583..119551622816914.0500345-CDS-L-elsbetiae_contig831:11583..11955Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig831 11584..11955 -
1691683908.264599-CDS-L-elsbetiae_contig831:11583..119551691683908.264599-CDS-L-elsbetiae_contig831:11583..11955Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig831 11584..11955 -
1622816914.065103-CDS-L-elsbetiae_contig831:12208..122651622816914.065103-CDS-L-elsbetiae_contig831:12208..12265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig831 12209..12265 -
1691683908.2770948-CDS-L-elsbetiae_contig831:12208..122651691683908.2770948-CDS-L-elsbetiae_contig831:12208..12265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig831 12209..12265 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig831.17312.1prot_L-elsbetiae_contig831.17312.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig831 11584..12265 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig831.17312.1

>prot_L-elsbetiae_contig831.17312.1 ID=prot_L-elsbetiae_contig831.17312.1|Name=mRNA_L-elsbetiae_contig831.17312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp
GDILGVGGLDEELEEIRRRVCVPLAAPPELLEDLGISPVRGMLLYGPPGC
GKTLLARRLSAALTRRPPAVVSGPEILERFVGSSEANIRALFDYPPDVPG
GDEREQEEALHVIVMDEFDSIGQRRGGGDDGGDRVRDSVVNQ*
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mRNA from alignment at L-elsbetiae_contig831:11584..12265-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig831.17312.1 ID=mRNA_L-elsbetiae_contig831.17312.1|Name=mRNA_L-elsbetiae_contig831.17312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=682bp|location=Sequence derived from alignment at L-elsbetiae_contig831:11584..12265- (Laminarionema elsbetiae ELsaHSoW15)
GGCGATATCCTTGGGGTGGGGGGGCTCGACGAAGAGCTGGAGGAGATCCG
GCGACGGGTAAGTGTGTGTGTGTGTGTTGTGTTTGGAGGCGGATCGGTCC
GGCCAAAAGATCGACACGATATGTATACTTTTTTGGTGGTCGTACATGTA
CGTATGTACAGAGTAGATATGTGTATTGAGACCCTTTTGTATCCTGTCTG
TGTCTTCATCGCGGCAGATAGGGTCGGGTAGATGCCTCTCCTTTCTTTCC
TCCAGATCAGTCTCCCACCCACTAACCCCCTCCCTACTTCCTTCCTCACC
AACATCACAGGTGTGCGTTCCTCTGGCGGCGCCGCCCGAGCTGCTGGAAG
ACCTGGGAATATCCCCCGTCCGGGGTATGCTGCTGTACGGGCCCCCCGGG
TGCGGCAAGACCCTGCTCGCGAGGCGGCTCTCGGCGGCGCTCACGCGGCG
GCCCCCGGCCGTGGTGTCCGGCCCGGAGATCCTGGAGCGCTTCGTGGGCT
CCTCCGAGGCCAACATCCGGGCCCTCTTCGACTACCCCCCGGACGTGCCC
GGCGGCGACGAGCGGGAGCAGGAGGAGGCCCTGCACGTGATCGTCATGGA
CGAGTTCGACAGCATCGGCCAGAGGCGCGGGGGCGGCGACGACGGCGGGG
ACCGCGTGCGCGACAGCGTGGTTAACCAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig831:11584..12265-

>mRNA_L-elsbetiae_contig831.17312.1 ID=mRNA_L-elsbetiae_contig831.17312.1|Name=mRNA_L-elsbetiae_contig831.17312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig831:11584..12265- (Laminarionema elsbetiae ELsaHSoW15)
GGCGATATCCTTGGGGTGGGGGGGCTCGACGAAGAGCTGGAGGAGATCCG
GCGACGGGGCGATATCCTTGGGGTGGGGGGGCTCGACGAAGAGCTGGAGG
AGATCCGGCGACGGGTGTGCGTTCCTCTGGCGGCGCCGCCCGAGCTGCTG
GAAGACCTGGGAATATCCCCCGTCCGGGGTATGCTGCTGTACGGGCCCCC
CGGGTGCGGCAAGACCCTGCTCGCGAGGCGGCTCTCGGCGGCGCTCACGC
GGCGGCCCCCGGCCGTGGTGTCCGGCCCGGAGATCCTGGAGCGCTTCGTG
GGCTCCTCCGAGGCCAACATCCGGGCCCTCTTCGACTACCCCCCGGACGT
GCCCGGCGGCGACGAGCGGGAGCAGGAGGAGGCCCTGCACGTGATCGTCA
TGGACGAGTTCGACAGCATCGGCCAGAGGCGCGGGGGCGGCGACGACGGC
GGGGACCGCGTGCGCGACAGCGTGGTTAACCAGTGAGTGTGCGTTCCTCT
GGCGGCGCCGCCCGAGCTGCTGGAAGACCTGGGAATATCCCCCGTCCGGG
GTATGCTGCTGTACGGGCCCCCCGGGTGCGGCAAGACCCTGCTCGCGAGG
CGGCTCTCGGCGGCGCTCACGCGGCGGCCCCCGGCCGTGGTGTCCGGCCC
GGAGATCCTGGAGCGCTTCGTGGGCTCCTCCGAGGCCAACATCCGGGCCC
TCTTCGACTACCCCCCGGACGTGCCCGGCGGCGACGAGCGGGAGCAGGAG
GAGGCCCTGCACGTGATCGTCATGGACGAGTTCGACAGCATCGGCCAGAG
GCGCGGGGGCGGCGACGACGGCGGGGACCGCGTGCGCGACAGCGTGGTTA
ACCAGTGA
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