mRNA_L-elsbetiae_contig8307.17309.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: D7FUL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL1_ECTSI) HSP 1 Score: 226 bits (575), Expect = 7.480e-66 Identity = 110/148 (74.32%), Postives = 130/148 (87.84%), Query Frame = 3 Query: 3 TMKEVAPLGLSIYGSGWD--RAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLLGNDTARRELGRRGRELVSTEHTYASRVISILATMGNVL 440 T+KEVAP GL+IYG+GW A ELLPFWRG+LP+GD+A LY SAKVV++TTETLQRSLGMVNNRVFEALSCG AVVSDAFP EE FGDHV +YRQPGDAARAVK+LLGNDTAR +LGRRGRELV ++HT+ASRV++IL+++ V+ Sbjct: 195 TLKEVAPYGLAIYGNGWSGVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGTAVVSDAFPAAEEMFGDHVHFYRQPGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSVDEVV 342
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: A0A6H5JH34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH34_9PHAE) HSP 1 Score: 127 bits (318), Expect = 7.820e-31 Identity = 67/150 (44.67%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 6 MKEVAPLGLSIYGSGWDRAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLL------GNDTARRELGRRGRELVSTEHTYASRVISILATMGNV 437 ++E AP GL IYG+GW E +WRGVLP D+A +Y SA VV+ T QR G +NNRV+EALS GA ++SD FP +E TFGD +LY R+ GD AR ++ LL G D R+ R+++ HT++ RV IL+ +G++ Sbjct: 11 LREAAPFGLDIYGNGWQDFP-EFSEYWRGVLPQEDLAFVYGSALVVIGVTTDAQRESGKINNRVYEALSVGAPLISDHFPALETTFGDALLYARRRGDVARHIESLLHSQQAVGRDNTEASKRRQRRDMIEDGHTWSQRVEDILSFVGSL 159
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: D7FQ36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ36_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.270e-29 Identity = 66/150 (44.00%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 6 MKEVAPLGLSIYGSGWDRAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLL------GNDTARRELGRRGRELVSTEHTYASRVISILATMGNV 437 ++E AP GL IYG+GW E +WRGVLP D+A +Y SA V+ T QR G +NNRV+EALS GA ++SD FP +E TFGD +LY R+ GD AR ++ LL G D R+ R ++ HT++ RV IL+ +G++ Sbjct: 11 LREAAPFGLDIYGNGWQEFP-EFSEYWRGVLPQEDLAFVYGSALAVVGVTTDAQRGSGKINNRVYEALSVGAPLISDHFPALEATFGDALLYARRRGDVARHIESLLQSQQAVGCDNTEASNRRQRRAMIEAGHTWSQRVEDILSFVGSL 159
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: A0A6H5KP81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP81_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.650e-20 Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 135 KVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLLGNDTARRELGRRGRELVSTEHTYASRVISILATMGNVL 440 +VV+STTETLQRSL MVNNRVFEALSCGAAVV +LLGNDTAR +LGRRGRELV ++HT+ASRV++IL++M V+ Sbjct: 40 QVVISTTETLQRSLSMVNNRVFEALSCGAAVV-----------------------------HLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSMDEVV 112
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: A0A023X1W3_9ACTN (Glycosyl transferase family 2 n=1 Tax=Rubrobacter radiotolerans TaxID=42256 RepID=A0A023X1W3_9ACTN) HSP 1 Score: 90.5 bits (223), Expect = 4.790e-18 Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 30 LSIYGSGWDRAAAELLPFWRG-VLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLLGNDTARRELGRRGRELVSTEHTYASRVISILA 422 L+++G W+ E + G LP ++ Y SA +VL+ R G V+NR+++AL+CGA V+SD PE+E+ FGD V+ YR P + V + L N RRE GRRG E V +T+ RV ILA Sbjct: 1183 LAVWGRLWEGRIDE--KYLAGEFLPNSEVRKAYSSAAIVLNDHWDDMREHGFVSNRIYDALACGALVISDDLPEIEDRFGDAVVTYRTPEELRDLVDHYLANPEERRERGRRGWEKVLAGYTFEQRVERILA 1312
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: F0YNI7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNI7_AURAN) HSP 1 Score: 89.4 bits (220), Expect = 1.160e-17 Identity = 63/161 (39.13%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 9 KEVAPLGLSIYGSGWDRAA------AELLPF-WRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVV-------SDAFPEMEETFGDH--VLYYRQPGDAA--------RAVKYLLGNDTARRELGRRGRELVSTEHTYASRVISIL 419 + V+ L+IYG+ WDR A A L+ W+G LP +IA LY A VVL TT++ QR LGMVNNRVFEAL+CG + D FPE++ H V+Y AA RA ++ ND A RE ++ HTY +R IL Sbjct: 326 RNVSGARLAIYGTAWDRFALWDNDHAILVACCWQGALPSDEIARLYSEASVVLGTTDSSQRRLGMVNNRVFEALACGGGRLISVEEQGEDGFPELQAMLRGHGDVVYSATSAAAAVASLLTAQRATPMVIRNDAAA------AREHITDRHTYDARAAGIL 480
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: UPI000A037EE7 (glycosyltransferase n=1 Tax=Rubrobacter aplysinae TaxID=909625 RepID=UPI000A037EE7) HSP 1 Score: 88.2 bits (217), Expect = 3.060e-17 Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 3 Query: 6 MKEVAPLG--LSIYGSGWDRAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLLGNDTARRELGRRGRELVSTEHTYASRVISILATM 428 +K++ P L+++G W E LP ++ Y SA +VL+ R G V+NR+++AL+CGA V+SD E+EE FG+ V+ Y G V Y L + R+ G RGR+LV +HT+ RV+ +++ + Sbjct: 1209 LKDLLPTNRDLAVWGGDWKGLIDERYVVGE-YLPNEEVRKAYSSAAIVLNDHWDDMREYGFVSNRIYDALACGALVISDHLEELEERFGEAVVTYEDAGQLKELVDYYLDHPDERKARGERGRQLVLEKHTFGHRVLEMMSRL 1350
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: A0A7C3DFS5_9BACT (Tetratricopeptide repeat protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3DFS5_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 2.080e-15 Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 15 VAPLGLSIYGSGWDRAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLLGNDTARRELGRRGRELVSTEHTYASRVISILATMGNVLLP 446 + PLGL IYGSGW+ EL + G + ++ +Y SAK+VLS ++ + + R++EA +CGAAVVSD ++ FGD +++ D V++LL ND AR+ L R R + S+ + +L+ G V P Sbjct: 307 LVPLGLRIYGSGWEDVP-ELGEAFLGSIHPREVPKVYSSAKIVLSVHKSWHARMDIPTTRLWEATACGAAVVSDPVSLGKQIFGDAIVWSEGRRDLVEKVQFLLENDGARQALKARARLHALRTGGFQSQAVLLLSRYGRVADP 449
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: A0A7S4EAD6_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAD6_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.480e-15 Identity = 56/154 (36.36%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 12 EVAPLGLSIYGSGWDRAAAELLPF-------WRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSC-GAAVVS------DAFPEMEETFGDHVLYYRQPGDAARAVKYLL----GNDTARRELGRRGRELVSTEHTYASRVISIL 419 +V + L IYGS WD + + + W+G LP G IA LY +A V+L TT++ QR LGMVNNRVFEAL+C G V+ D F E+ H + D +A+ LL + T R + + R HTY +R IL Sbjct: 216 DVPGVRLKIYGSAWDHFSLQDKDYARLAACCWQGRLPSGSIARLYANATVILGTTDSSQRRLGMVNNRVFEALACSGGQFVAVEERGVDFFSELRGAIRSHGVVTYATTDGIKAITDLLVAYHPSSTLLRRVAAKARAHAIRHHTYDTRAAIIL 369
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Match: UPI000497F9F4 (glycosyltransferase n=1 Tax=Solidesulfovibrio alcoholivorans TaxID=81406 RepID=UPI000497F9F4) HSP 1 Score: 79.3 bits (194), Expect = 1.410e-14 Identity = 51/119 (42.86%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 27 GLSIYGSGWDRAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTETLQRSLGMVNNRVFEALSCGAAVVSDAFPEMEETFGDHVLYYRQPGDAARAVKYLLGNDTARRELGRRGRELVST 383 GL+I+GS WD A EL RG L + LY SA VV+S R+ + +R+ EALSCGAA+VSD+ P E +GD V + R V LL + AR L RGREL+ T Sbjct: 173 GLAIWGSDWD-AFPELASHVRGPLHPALVPALYASAGVVVSVHSPWHRANDVPTSRLAEALSCGAALVSDSLPFARERYGDAVAFCDDGAAMERTVAALLADAGARERLAGRGRELMET 290 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8307.17309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8307.17309.1 >prot_L-elsbetiae_contig8307.17309.1 ID=prot_L-elsbetiae_contig8307.17309.1|Name=mRNA_L-elsbetiae_contig8307.17309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp MKEVAPLGLSIYGSGWDRAAAELLPFWRGVLPVGDIAPLYRSAKVVLSTTback to top mRNA from alignment at L-elsbetiae_contig8307:297..6301+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8307.17309.1 ID=mRNA_L-elsbetiae_contig8307.17309.1|Name=mRNA_L-elsbetiae_contig8307.17309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6005bp|location=Sequence derived from alignment at L-elsbetiae_contig8307:297..6301+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8307:297..6301+ >mRNA_L-elsbetiae_contig8307.17309.1 ID=mRNA_L-elsbetiae_contig8307.17309.1|Name=mRNA_L-elsbetiae_contig8307.17309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=978bp|location=Sequence derived from alignment at L-elsbetiae_contig8307:297..6301+ (Laminarionema elsbetiae ELsaHSoW15)back to top |