mRNA_L-elsbetiae_contig83.17305.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: D7FS97_ECTSI (Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS97_ECTSI) HSP 1 Score: 424 bits (1091), Expect = 7.230e-147 Identity = 217/276 (78.62%), Postives = 230/276 (83.33%), Query Frame = 1 Query: 1 DDERESTAKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGK-LTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 D + S+ K ++YTPDDVALHNC EDCWLSLFGQV+DLTELI+ANRGPLADPLIAAAGTD+SHWF L PD K + G S KS STK KE N GR +ECE DPRTFVDP TGLT PYLPMGRFLHVPPNFPTTKWST+FGLPWWRD KRVVGK LTRKARPLRVVNILSRQEDQLLVACE+TIADIQERYLEYNAHAASYTWKVL++E KFVPA MDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA Sbjct: 9 DQDDSSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKPKPRGIGGSDKSSNKALSTKIVKEGDDGN---GRLEECENASDPRTFVDPQTGLTTPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDE----KFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 277
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A6H5KWF6_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF6_9PHAE) HSP 1 Score: 317 bits (811), Expect = 1.730e-104 Identity = 179/278 (64.39%), Postives = 199/278 (71.58%), Query Frame = 1 Query: 1 DDERESTAKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMG-RFLHVPPNFPTTKWS-TNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQ-ERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 D + S+ K ++YTPDDVALHNC EDCWLSLFGQV+DLTELI+ANRGPLADPLIAAAGTD+SHWF L PD KS+ G +S STK KE G N GR +ECE +PRTFVDP TGLT PYLPMG + +PPN T S T LP + KLTRKARPLRVVNILSRQEDQLLVACE+TIADIQ ER+L A++ + KFVPA MDQTLEENGIVDDDLAFEKLGIDDDGYMP+LHIYFNDDLTIA Sbjct: 9 DQDDSSSQKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPRGIGGGDRSNNKALSTKTVKEGGDGN---GRLEECENASEPRTFVDPQTGLTTPYLPMGSQPTRIPPNLGTACDSLTTVTLP------HRIEKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQDERFLGVGANSVLLHLQ---------KFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPILHIYFNDDLTIA 268
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A836C925_9STRA (Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C925_9STRA) HSP 1 Score: 288 bits (736), Expect = 1.090e-93 Identity = 142/270 (52.59%), Postives = 177/270 (65.56%), Query Frame = 1 Query: 16 STAKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 + A +Y+TP+DVA HNC EDCW+S +V+DLT LI +RGPLA+P+IAAAG+DISHWF+ K GDP+T +DP TGLTV Y P GRF+HVPPNFPTT W T+FG PWW+D + VVG LT +AR +R+VN+L++QED+LLV+CE+T+A IQ RY E NAHA SYTWK L + +KFVP +M++TLEENG+VDD AF KLG D D PVLHIYFNDDLT+A Sbjct: 8 AAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFN-----------------------------------------------PKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 230
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A7S2F938_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F938_9STRA) HSP 1 Score: 248 bits (633), Expect = 2.750e-78 Identity = 124/266 (46.62%), Postives = 160/266 (60.15%), Query Frame = 1 Query: 22 AKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLT 819 AK ++YTP+D+A HNC +D W+S+ +V DLTELI ANRGPLA PLI AG DISHWF K G +TF+DP G+ VPY P GRFLHVPP PT W+T+FG WW D ++G+LT K R +++VN+L+ Q D L V E T+ +I++RY+EYN HA SYTWK L E+A FVP +M++TL+ENG+ D+ F+KLGID D Y PV+H+YFNDDLT Sbjct: 2 AKRRFYTPEDLAAHNCAKDIWVSINYKVFDLTELIQANRGPLAQPLIEVAGQDISHWFD-----------------------------------------------SKTGGVKTFMDPSRGVRVPYTPHGRFLHVPPPEPTAAWNTDFGTAWWLDEDLIIGRLTEKTRKVQIVNVLTHQTDLLTVCSEETLEEIRDRYMEYNKHAQSYTWKKLEEDA----FVPMDMEKTLDENGVPDESEEFDKLGIDFDYYYPVIHVYFNDDLT 216
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A7S2C328_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C328_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.550e-74 Identity = 117/268 (43.66%), Postives = 163/268 (60.82%), Query Frame = 1 Query: 22 AKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 ++ +YYTP DVA HN DC +S+F +V DLT+LI N+GPLA PL+ AG DISHWF T P +C +T++DP G+T+PY P GRF+ VPP+ PT WST+FG+PWW++ +VG+L+ K R + +VN+L++Q+D L V E T+ +I++RY+EYN HA SYTWK L E KFV NM +TL+ENG++D+ FE+L ID+D Y P++H+YF D+LTIA Sbjct: 11 SRRRYYTPGDVAAHNSATDCLVSIFHRVFDLTDLIRDNQGPLAQPLVEVAGQDISHWF-----------------------------------------TNNPVQC------KTYIDPDRGMTLPYTPHGRFIDVPPSEPTASWSTSFGIPWWQNEDIIVGRLSEKTRKIMIVNVLTQQKDVLEVCSEETMLEIRDRYMEYNKHAESYTWKKLHE----GKFVVMNMQKTLDENGVIDESDDFEELEIDEDFYYPIIHVYFEDNLTIA 227
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A7S2WHL5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHL5_9STRA) HSP 1 Score: 235 bits (600), Expect = 6.750e-73 Identity = 118/271 (43.54%), Postives = 161/271 (59.41%), Query Frame = 1 Query: 13 ESTAKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 +S +YYTP++VA HN D W+S+F +V++LT+L+ +RG L PLI AAG DISHWF EK G+ +T +DP G+ +PY P GRFLHV P PT WST PWW+D V+GKLT+K R +++VN++S+Q D L V E TI++I++RY+EYN HA+SYTWK L + FV +M++TL ENG+VD+ FE+LGI+DD Y P+LH+YFNDDLT+A Sbjct: 28 DSMETRRYYTPEEVAAHNSAGDLWVSVFHRVLNLTDLVREHRGELTVPLIEAAGQDISHWFD-----------------------------------------------EKTGNVKTRIDPGKGIRLPYTPQGRFLHVAPAEPTANWSTKIANPWWQDENLVIGKLTQKTRKVQIVNVISQQTDLLTVCSEETISEIRDRYMEYNRHASSYTWKKL----AQGTFVLLDMEKTLAENGVVDESEEFEELGIEDDFYYPILHVYFNDDLTVA 247
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: K3WC11_GLOUD (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC11_GLOUD) HSP 1 Score: 230 bits (586), Expect = 5.010e-71 Identity = 124/272 (45.59%), Postives = 156/272 (57.35%), Query Frame = 1 Query: 10 RESTAKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 +E K +YYTP +VA N DCW+S+ +V+DL+ELI+ NRG L PL+ AG DISHWF E E + + VDP ++ P+LP GRFLHV P P W T+ LPWW+DPK VGKLTRKAR + VVN+L++Q L V CE TI DIQ RYLE N+HAASYTWK L ++ +FVP M+ TLEENGI D+ L FE L +D+ Y P+LH+YFNDDLT+A Sbjct: 10 QEHDHKLRYYTPHEVAARNQAHDCWVSINHRVLDLSELIMDNRGILTQPLVLHAGEDISHWFDP--------------------------------------------ETEDI---KYHVDPERNISFPFLPYGRFLHVAPLEPLGDWKTSDFLPWWKDPKYTVGKLTRKARWIEVVNVLTQQRHSLQVCCEETIHDIQTRYLEMNSHAASYTWKYLDDD----EFVPLKMNCTLEENGIPDESLMFEHLDMDEHQYKPILHLYFNDDLTVA 230
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A8K1CLP1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLP1_PYTOL) HSP 1 Score: 229 bits (584), Expect = 1.380e-70 Identity = 122/269 (45.35%), Postives = 155/269 (57.62%), Query Frame = 1 Query: 19 TAKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 T +YYTP +VA+HN EDCW+S+F +++DL+ELI +RG L PLI AG DISHWF ++ D R VD + +P+LP GRFL+VPP PT+ WST +PWW+D K VVGKLT K R + +VN+L++Q L V CE TI +IQ RYL +NAHA SYTWK L ++ FVP NM QTLEENGI D+ FEKL +D+ Y P L+IYFNDDLT+A Sbjct: 23 TRALRYYTPREVAMHNTGEDCWVSIFHRILDLSELIQEHRGLLTQPLILHAGEDISHWFDPATQ-----------------------------------------------DVRKHVDAGRNVELPFLPYGRFLNVPPPEPTSNWSTTDAVPWWKDAKYVVGKLTTKVRWIEIVNVLTQQHHALEVCCEETIEEIQARYLRFNAHARSYTWKYLDDD----DFVPLNMKQTLEENGIPDESPLFEKLDMDEQQYKPSLYIYFNDDLTVA 240
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: A0A7S1TZ39_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ39_9STRA) HSP 1 Score: 228 bits (582), Expect = 4.470e-70 Identity = 122/297 (41.08%), Postives = 161/297 (54.21%), Query Frame = 1 Query: 25 KTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDG------------------------------YMPVLHIYFNDDLTIA 825 + +YYTP+++ALHNC EDCW+S+FG+V DLTE I ANRGPLA P+I +G D+SHWF EK R +DP T L +PYLPMGRFLHVPP FP++ W T+FG PWW+D +G L++K R +R++N L+RQ D+L+V E TI +IQ+R L YNAHAASYTWK LRE KF +M +TL ENG++D+ F+ L +G Y+P L +Y+NDDLT+A Sbjct: 10 RRRYYTPEEMALHNCAEDCWVSVFGKVYDLTEFIAANRGPLAQPIILMSGKDVSHWFD-----------------------------------------------EKTKYVRMHIDPETNLRLPYLPMGRFLHVPPAFPSSAWRTDFGTPWWQDADLCIGALSQKTRVVRIINALTRQADELIVPTEETIDEIQDRCLSYNAHAASYTWKSLRE----GKFEVLDMAKTLAENGVIDELDNFKMLDPKPEGFPPEETDLTESEKRIVEEANRYDESDIHAEYIPELVLYYNDDLTVA 255
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Match: F0VIR4_NEOCL (Cytochrome b5 domain-containing protein 1 n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VIR4_NEOCL) HSP 1 Score: 227 bits (579), Expect = 6.890e-70 Identity = 115/268 (42.91%), Postives = 156/268 (58.21%), Query Frame = 1 Query: 22 AKTKYYTPDDVALHNCTEDCWLSLFGQVVDLTELIIANRGPLADPLIAAAGTDISHWFSLSSLPDGNKSRAGGASDSSKSGAGVSSTKAAKESGGDNSVTGRPDECEKVGDPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRQEDQLLVACENTIADIQERYLEYNAHAASYTWKVLREEASSSKFVPANMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 825 A+ +YYT D+A H+ DCW++LFG+V+DLT L++ ++ LA PLIAAAGTDIS WF EK +P +DP TG+ PY P GRF+H+PP +P+ W+T G PWW D K V+G+LT+K R +R++N+L + E L V CE+TI +IQ RYL N HA SYTWK L + P NM+QTLEENGI D+++ +LGI+ D ++P LH+YFNDDLT+A Sbjct: 24 ARCRYYTLADLASHSSHYDCWVALFGRVLDLTPLLVKHQNELALPLIAAAGTDISDWFD-----------------------------------------------EKTRNPTRHIDPETGIEQPYTPQGRFIHIPPPYPSGDWATTVGTPWWLDEKYVIGRLTKKTRKIRILNLLVQHEVVLEVPCEDTINEIQRRYLSENDHAGSYTWKRLEK--------PLNMEQTLEENGIPDEEMRLRELGINPDDHIPTLHLYFNDDLTVA 236 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig83.17305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig83.17305.1 >prot_L-elsbetiae_contig83.17305.1 ID=prot_L-elsbetiae_contig83.17305.1|Name=mRNA_L-elsbetiae_contig83.17305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp MGRFLHVPPNFPTTKWSTNFGLPWWRDPKRVVGKLTRKARPLRVVNILSRback to top mRNA from alignment at L-elsbetiae_contig83:18319..22642- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig83.17305.1 ID=mRNA_L-elsbetiae_contig83.17305.1|Name=mRNA_L-elsbetiae_contig83.17305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4324bp|location=Sequence derived from alignment at L-elsbetiae_contig83:18319..22642- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig83:18319..22642- >mRNA_L-elsbetiae_contig83.17305.1 ID=mRNA_L-elsbetiae_contig83.17305.1|Name=mRNA_L-elsbetiae_contig83.17305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=846bp|location=Sequence derived from alignment at L-elsbetiae_contig83:18319..22642- (Laminarionema elsbetiae ELsaHSoW15)back to top |