mRNA_L-elsbetiae_contig8293.17300.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 6.360e-147 Identity = 241/387 (62.27%), Postives = 278/387 (71.83%), Query Frame = 2 Query: 101 YLGITDHGELRSFHERLVKEKXXXXXXXXXXXXXXLVLLRQHQPVALGSRRLGAAAGKGGRGGGSKRTRNPCISAASDSEKQGGARSXXXXXXAAGAGCLVSPGAVGEDSAESDDDAKRRGMRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPLDATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRISQSFGLDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVDGYDAE 1261 YLG TDHGELRSFHERL KEK LV+LRQ Q A S++LGAA+G G + T C+S+A+DS K+GGA S AA AG L S AVGED+ +S D + +KTL+GK T+ PS+T+ VK+K Q +GI QQ +I+AG+Q D RTLRD NI+N S HLVL L KPVILLYP AP+D TVA+ELSPLWSFS+LYPK L+Q A D E VA GGQQC+WNVHASP GSL+DLSTGREYPYLFWEADSSDGR+++SFGLD +RSFCVAG+AAGVFLD ALERLGLN+RERCDMVT WLPQLESS FN IYFV VERYE+AARLT+VP PDVTIRVFMAFRG YDAE Sbjct: 38 YLGTTDHGELRSFHERLTKEKEQLRMNGEQLREKQLVILRQQQTAAHSSQKLGAASG-GSSQTSPRSTGRACVSSAADSVKEGGAGSSARSSSAADAGALASQAAVGEDTTDSVADEDENEISFSIKTLTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVA-GGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAE 420
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A8H8MJY2_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MJY2_9AGAM) HSP 1 Score: 221 bits (564), Expect = 5.470e-64 Identity = 123/282 (43.62%), Postives = 160/282 (56.74%), Query Frame = 2 Query: 464 MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPLD-ATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDG---------------RISQSFG-----LDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVD 1246 M+++VKTL+GK T++V+ SDTID VK K Q K+G+ P QQ L+FAG+Q+EDGRTL DYNIQ EST+ LV +L GGKPV+ L+P P + + L L+P WSFSALYP P V A GQ W V A PDG+L D TGRE YLFWEA ++ ++ +F + S + D ++D L LGL+ RC +TYWLP L+ A+ F+ YE AA + V P+PDVT RVFM FRGV+ Sbjct: 1 MQLYVKTLTGKKTTIEVESSDTIDNVKAKIQDKDGVPPDQQRLLFAGKQMEDGRTLSDYNIQRESTVILVYRLRGGKPVVYLFPPLPTNNVRIDLALTPAWSFSALYPSVP---------------VRPTAGDGQSVAWIVDAKPDGTLSDHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVASTFDPSRPVITPDNSTVLPFDKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFRGVE 267
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A8H8J338_9AGAM (Ubiquitin family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8J338_9AGAM) HSP 1 Score: 218 bits (556), Expect = 8.160e-63 Identity = 124/282 (43.97%), Postives = 157/282 (55.67%), Query Frame = 2 Query: 464 MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPLDAT-VALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDG---------------RISQSFG-----LDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVD 1246 M+++VKTL+GK ITL+V+ SDTI VK K Q KEG P QQ L+FAG+Q+ED TL DYNIQ E T+H V L GGKPV+ L+P P + V L L+P WSFSALYP + V A GGQ W V A PDG+L D TGRE YLFWEA ++ ++ +F + S + D A ++D L LGL+ RC +TYWLP L+ A+ F+ YE AA + V P+PDVT RVFM FRGV+ Sbjct: 1 MQVYVKTLTGKTITLEVESSDTIANVKAKIQDKEGYPPEQQRLMFAGKQIEDDCTLGDYNIQKEYTIHFVSTLRGGKPVVYLFPPLPTNRIRVDLALAPAWSFSALYPS---------------ASVRPTAGGGQSVAWIVDAKPDGTLSDRGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVAATFDPSRPVITPDNSTVIPFDKATGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFRGVE 267
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A8H8JUU4_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JUU4_9AGAM) HSP 1 Score: 220 bits (561), Expect = 4.440e-62 Identity = 126/284 (44.37%), Postives = 157/284 (55.28%), Query Frame = 2 Query: 464 MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPL-DATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDGR------------ISQSFGLDETRSFCVAGDAAGV-------FLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVDGYD 1255 M +FVKTL+GK IT+ SDTID +K K Q +EGI P QQ LIFAG+Q+EDG L DYNIQ+ STLHLVL+L GGKPVI L+P P D + L L+ W FS LYP + ++ A GQ W V A PD +L D +TGRE YLFWEA S+ + F D R D+ + ++D AL LGL+ RC +TYWLP L+ + A+ F+ YE AARL + P PDVT RVFM FRGV+ D Sbjct: 120 MTLFVKTLTGKTITVYAYRSDTIDCIKAKIQDREGIPPDQQRLIFAGKQLEDGLMLIDYNIQDNSTLHLVLRLRGGKPVIYLFPPIPTSDIRIELALTKRWGFSVLYPP---------------AAISRTADDGQSVLWTVDAKPDSTLFDRATGREVSYLFWEAHSNSTELPSPACTRACTPVEDIFPFDPARPSLTPADSVVLPLDKVTEYIDDALLSLGLHTEARCSFITYWLPDLQRHQYIALRFLPQPDYEAAARLNITPIPDVTTRVFMLFRGVEEAD 388
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A8H8MML9_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MML9_9AGAM) HSP 1 Score: 215 bits (548), Expect = 1.210e-61 Identity = 121/282 (42.91%), Postives = 157/282 (55.67%), Query Frame = 2 Query: 464 MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPLDAT-VALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDG---------------RISQSFG-----LDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVD 1246 M++ VKTL+GK I ++V+ SDT+D VK K Q KEGI P Q LIFAG+Q+EDGRTL DYNI + T+H+V +L GGKPV+ L+P P ++ V L L+P WSFSALYP P V A G W V A PDG+L D TGRE YLFWEA ++ ++ +F + S + + ++D L LGL+ RC +TYWLP L+ A+ F+ YE AA + V P+PDVT RVFM FRGVD Sbjct: 1 MQLIVKTLTGKTIWVEVETSDTVDNVKAKIQDKEGILPEVQRLIFAGKQMEDGRTLSDYNILKQRTIHVVTRLRGGKPVVYLFPPLPTNSIRVDLALTPAWSFSALYPSAP---------------VRPTAGDGHSVAWIVDAKPDGTLSDHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVAATFDPSRPVITPDNSTVLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFRGVD 267
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A8H8J2X5_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8J2X5_9AGAM) HSP 1 Score: 212 bits (539), Expect = 6.500e-60 Identity = 124/291 (42.61%), Postives = 163/291 (56.01%), Query Frame = 2 Query: 464 MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPLD-ATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDG-----RISQSFG--------LDETRSFCVAGDAAGV-------FLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVDGYDAEHRRG 1273 M++F+KTL+GK++TL+V+ SDTID VK K Q KEG+ P +Q LIFAG Q+ED TL DYNI+ ESTLHLV +L GGKPVI L+P A + V L L+ W FSALYP P + A GGQ W V A PDG+L + TGRE YLFWEA ++ +S+ D +R ++ + ++D L LGL+ RC +TYWLP L+ A+ F+ YE AA + V P+PDVT RVFM F GV+ + + RG Sbjct: 34 MQLFIKTLTGKILTLEVESSDTIDNVKSKIQDKEGMPPDEQRLIFAGTQLEDRCTLSDYNIKKESTLHLVKRLRGGKPVIYLFPPAAANNIRVDLALTQAWDFSALYPSAP---------------ICPTADGGQSVAWIVDAKPDGTLFEHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQGVVATFDPSRPIITPSNSTLLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQQHKHIALRFLPQSEYEAAAPMHVTPSPDVTTRVFMLFCGVEESNVDEWRG 309
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A5C3KIE3_9AGAR (Ubiquitin-domain-containing protein n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3KIE3_9AGAR) HSP 1 Score: 207 bits (526), Expect = 7.180e-57 Identity = 120/287 (41.81%), Postives = 157/287 (54.70%), Query Frame = 2 Query: 449 AKRRGMRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPLDATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEAD-----------------SSDGRISQSF-----GLDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGV 1243 A RG ++FV +L+GK L+V DT+ VK K Q KEGI P QQ LIFAGRQ+ED RT+ DYNIQ ES LHLVLKL G KPV+ LYP V L L P W FSA+YP +K+Q+ G + +W V A+P G L+D+ TG E YLFWEA+ SSDG + F L++ S + D ++LD +L+ LGL+ R +TYWLP + ++ F+ YE+AA L + P PD+ RVFM F+GV Sbjct: 126 ASTRGFQVFVISLTGKKTILEVSSDDTVGNVKAKIQDKEGIPPDQQRLIFAGRQLEDSRTMSDYNIQRESQLHLVLKLRGDKPVLYLYPPQASRVEVGLSLVPQWEFSAIYPP---AKVQKDG-------------GMETIRWLVDATPSGLLKDVGTGLEATYLFWEAETTDVGLFTPPHSPELGKSSDGGEVEKFIPNQPTLNKDNSVLIKVDDIMLYLDSSLKALGLHTEARTSFITYWLPSILKHTHISLRFLPQSSYERAAPLLITPKPDIVARVFMLFQGV 396
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A8H8MCD0_9AGAM (Ubiquitin family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MCD0_9AGAM) HSP 1 Score: 204 bits (519), Expect = 3.440e-56 Identity = 123/284 (43.31%), Postives = 152/284 (53.52%), Query Frame = 2 Query: 464 MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPL-DATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSD--------GRISQSFG-----------LDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVDGYD 1255 + +FVKTL+GK I+L DTID +K K Q KE I P QQ LI+AG+Q+EDGRTL DYNI +TLHLVL++ GKPVI L+PSAP D V L L W FSALYP P+ GQ W V A PD +L D +T RE YLFWEA S+ R L S + D ++D AL LGL+ RC +TYWLP+L+ + A+ F+ YE AARL + P PD+T RVFM FRGV+ D Sbjct: 102 LDLFVKTLTGKTISLQSYRHDTIDNLKVKIQDKERIPPDQQRLIWAGKQLEDGRTLNDYNISANATLHLVLEIRAGKPVIYLFPSAPATDIRVELSLVNHWGFSALYPPVPTCD---------------TVNHGQSVSWIVDAKPDSTLFDHATSREVSYLFWEAHSNPTLPLSPTPSRPGTPLADPLPFNPAYPSLTPADSVVLPLDKTTGYIDDALLSLGLHTEARCSFITYWLPELQRHQYIALRFLPQPDYEAAARLNITPMPDITTRVFMLFRGVEEAD 370
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A0K6FPD1_9AGAM (Polyubiquitin-C n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6FPD1_9AGAM) HSP 1 Score: 201 bits (512), Expect = 1.210e-54 Identity = 124/293 (42.32%), Postives = 161/293 (54.95%), Query Frame = 2 Query: 437 SDDDAKRRGMRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYP-SAPLDATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSS------------DGRISQSFG-----LDETRSFCVAGDAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVDGYDAE 1261 +D K +FV TL G+VI+L + SDTID +K Q + G+ P +Q LIFAG+Q+EDGRTL DYNIQ E+TLHLV +L GGKPVI L+P S+ D V L L+ W FS +YP + + AA + + SL GQ W V+A PDG+L D +T RE YLFWEA ++ + +F L + S + + ++D AL LGL+ R +TYWLP L F A+ F+ YE AA L V PAP V RVFM FRGVD E Sbjct: 143 NDPVVKDNEATLFVITLKGEVISLPFRSSDTIDNIKASIQNRTGMPPDEQRLIFAGKQLEDGRTLSDYNIQRETTLHLVKRLRGGKPVIYLFPPSSTSDIRVQLSLARSWDFSEIYPP---TTITTAAKETK-SL-------GQSVAWTVNAQPDGTLWDQATNREVSYLFWEARTNPKLPSSPPTTRPSSPVEANFDPASPLLLPSHSALLPFNKVTGYIDDALLALGLHTEARTSFITYWLPDLSKHAFIALRFLPQHEYENAAPLDVSPAPQVVTRVFMLFRGVDESQVE 424
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Match: A0A0K6FP42_9AGAM (Ubiquitin family protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6FP42_9AGAM) HSP 1 Score: 201 bits (510), Expect = 2.400e-54 Identity = 125/290 (43.10%), Postives = 154/290 (53.10%), Query Frame = 2 Query: 461 GMRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVEDGRTLRDYNIQNESTLHLVLKLSGGKPVILLYPSAPL-DATVALELSPLWSFSALYPKPPSSKLQQAALDPEVSLVTAVAAGGQQCQWNVHASPDGSLEDLSTGREYPYLFWEADSSDGRISQSFGLDETRSFCVAG---------------------DAAGVFLDGALERLGLNMRERCDMVTYWLPQLESSPFNAIYFVNVERYEKAARLTVVPAPDVTIRVFMAFRGVDGYDAEH 1264 GM+IFVK +GK I L TID VK Q KEG +Q LIFAG+Q+EDGRTL DYNIQ E+TLHLV L GGKPVI L+P P D + L L+P W FSA+YP S+ + + DP SL GQ W V+A PDG L D +T RE YLFWEA ++ ++ S + S D ++D L LGL+ R +TYWLP L PF A+ F+ YEKAA L + PAP V RVFM FRGV+ E+ Sbjct: 149 GMQIFVKMPTGKCIALAASSFMTIDAVKGLIQDKEGFPVHEQRLIFAGKQLEDGRTLADYNIQKETTLHLVQSLRGGKPVIYLFPPTPTSDIRLWLSLAPSWKFSAIYP---STVIDSSLKDPR-SL-------GQTIAWTVNAQPDGVLWDQATEREIAYLFWEAHTNP-KLPSSPPITRPSSXXXXXXXXXXXXXXXXXXXXXXXXXFDKVTGYIDDTLLALGLHTEARTSFITYWLPDLSKHPFIALRFLPQHEYEKAASLDISPAPQVVTRVFMLFRGVEEAQIEY 426 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8293.17300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8293.17300.1 >prot_L-elsbetiae_contig8293.17300.1 ID=prot_L-elsbetiae_contig8293.17300.1|Name=mRNA_L-elsbetiae_contig8293.17300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp MRIFVKTLSGKVITLDVKPSDTIDGVKRKFQGKEGIRPGQQCLIFAGRQVback to top mRNA from alignment at L-elsbetiae_contig8293:1563..6958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8293.17300.1 ID=mRNA_L-elsbetiae_contig8293.17300.1|Name=mRNA_L-elsbetiae_contig8293.17300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5396bp|location=Sequence derived from alignment at L-elsbetiae_contig8293:1563..6958- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8293:1563..6958- >mRNA_L-elsbetiae_contig8293.17300.1 ID=mRNA_L-elsbetiae_contig8293.17300.1|Name=mRNA_L-elsbetiae_contig8293.17300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig8293:1563..6958- (Laminarionema elsbetiae ELsaHSoW15)back to top |