mRNA_L-elsbetiae_contig829.17298.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 9.130e-127 Identity = 367/702 (52.28%), Postives = 402/702 (57.26%), Query Frame = 1 Query: 13 MASENAASAAVVTPDRPDQPRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRRSVSGSXXXXXXXXXXXXXXXXXXXXXXXXDXGSGSSG--WTPP-RAHKSGAAVRRVGKLRNKARGGNRNPSMMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFSLTTDVLSSDAGDRSPWTSGESSDSDVSISEASTERLPSKGAGKKAAAAAEGRCSPTAQQALLRRPRGRGDXXXXXXXXXXXXXXXXXXXXXXXXXGEASMGGRGRSRRALNSELREQQELQARRFSSCGXXXXXXVQXXXXXXXXXXXXXXXATAATANRKSPFHFFKKTFSFMERQS-SGHSRDKNTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGVVDDRGVRPPPVTVTGGVHRIPMDPSTAAGNKALTSSPLTPKSSMEAXXXXXXXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSNSNSSRLDKHGGIVKPGAP------PQHLRNMSVDTDPGLPPQSPGGGGSRQGQSPTGLGSLASMELARDSGKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 2088 MA+ ++ SA R ++ R GKRGAPQAFARKLAEIL E+ A ISWN GSAF V DVERFS+D+L K+YRHSKFSSFQRQLNLY FRKIVKG DAGGY HPMF R+RP+DL HVRRS+SGS XXXXXXXXX ++G W+PP R HKSGAA RRVGKLRNK+ N S XXXXXXX S T SSDAG+RSPWTSGESSDSD + + LP G +AA+AE XXXXXXXXXXXXXXXXXXXXXXXXX ++ R + G XX +A+ + SPF FFKK FSFMERQS SGH+R+ +TSS+ V RGVRPPPV+VTGG RIP+DPSTAAGNKALTSSPLTPKSS+EA XXXXXXXXXXXXXXXXXXX QREELGLVEQLTNMVEVFDICDLLRKVS S SSRLDKHG IVKP P HLRNMSVDTD G+P Q P G QSPTGLGSLASMEL RDS KDWDTLMAGSADVSDLGNTMVQSVAEFFSF Sbjct: 14 MATSSSPSATAGDGQR-ERGRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKATAKXXXXXXXXXXLKQQATGGQWSPPARVHKSGAAARRVGKLRNKSSPAGSNGSS----GGDKPSSYSARLVADHHMAGAATXXXXXXXGSGVGVGIPPSSADTRAASSDAGERSPWTSGESSDSDAAAT------LPQVGV---SAASAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRSYSPSRPEAAGECGRDAGGGAQQQRXXGEATAGPGSASPTRKSSPFSFFKK-FSFMERQSGSGHNRNMSTSSSVDMTTAGALPSERPASSAGNDGPISSLMVDTSAEARAAASG-------------------------------VSLRGVRPPPVSVTGGGQRIPIDPSTAAGNKALTSSPLTPKSSLEAAAIXXXXXXXXXXXXXXXXXXX---QREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIVKPSGXXXXXXVPHHLRNMSVDTDQGMP-QPPLEGE----QSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 661
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: D8LDA5_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA5_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 2.180e-122 Identity = 370/697 (53.08%), Postives = 403/697 (57.82%), Query Frame = 1 Query: 97 QAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRRSVSGSXXXXXXXXXXXXXXXXXXXXXXXXDXGSGSSG--------WTPP-RAHKSGAAVRRVGKLRNKARGGNRNPSMMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFSLTTDVLSSDAGDRSPWTSGESSDSDVSISEASTERLPSKGAGKKAAAAAEGRCSPTAQQALLRRPRGRGDXXXXXXXXXXXXXXXXXXXXXXXXXGEASMGGRGRSRRALNSE----LREQQELQARRFSS-------------CGXXXXXXVQXXXXXXXXXXXXXXXATAATANRKSPFHFFKKTFSFMERQSS-GHSRDKNTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGVVDDRGVRPPPVTVTGGVHRIPMDPSTAAGNKALTSSPLTPKSSMEAXXXXXXXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSNSNSSRLDKHGGIVKPGAP------PQHLRNMSVDTDPGLPPQSPGGGGSRQGQSPTGLGSLASMELARDSGKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 2088 +AFARKLAEIL E+ A ISWN GSAF V DVERFS+D+L K+YRHSKFSSFQRQLNLY FRKIVKG DAGGY HPMF R+RP+DL HVRRS+SGS XXXXXXXXXXXXX X W+PP R HKSGAA RRVGKLRNK+ N S XXXXXXXXXXXX XX + S SSDAG+RSPWTSGESSDSD + + LP G S + XXXXXXXXXXXXXXXXXXXXXXXXX GR ++ E L E+++ Q RR S CG Q +A+ + SPF FFKK FSF+ERQSS GH+R+ +TSS+ RGVRPPPVTVTGG RIP+DPSTAAGNKALTSSPLTPKSS+EA XXXXXXXXXXXXXXXXXXX QREELGLVEQLTNMVEVFDICDLLRKVS S SSRLDKHG I+KP + P HLRNMSVDTD G+P QSP GGG QSPTGLGSLASMEL RDS KDWDTLMAGSADVSDLGNTMVQSVAEFFSF Sbjct: 12 EAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXRGEWSPPARVHKSGAAARRVGKLRNKSSPAGSNSSSRGGDKPSSYSARLVADHQRAGVATAXXXXXXXXXXXXVXXPAS--SADAAAGSSDAGERSPWTSGESSDSDAAAT------LPQAGV------------SAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCVGRSHEQQQHALERGGRLAEKRQQQGRRSYSPSLRDTSGEVAGECGRGGGEGTQQLRDGGEAPAGA---GSASPTRKSSPFSFFKK-FSFVERQSSSGHNRNMSTSSSVDMTTAGALPSERPASSSAGDDGPISPLMVDTSAEARAAASGASL------------------------------RGVRPPPVTVTGGGQRIPIDPSTAAGNKALTSSPLTPKSSLEAAAMXXXXXXXXXXXXXXXXXXX---QREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIMKPSSXXXXXXXPHHLRNMSVDTDQGMP-QSPLGGG----QSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 646
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK) HSP 1 Score: 136 bits (342), Expect = 1.060e-30 Identity = 65/106 (61.32%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 70 PRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRRSVSGS 387 PR G+RGAPQAFARKL EIL E ++SWN AG+AF V+D++RFS+++L+K++RHSKF+SFQRQLNLY FRKI +G DAG Y H F + +P+ L VRRS S S Sbjct: 4 PRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSS 109
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.250e-29 Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 70 PRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRR 372 PR G+RGAPQ F RKL EIL E E +I W ++G +F++K++E F ++L+K++RH K+SSFQRQLNLY FRK+ KG D G Y H F R++PE L VRR Sbjct: 4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRR 104
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A835ZDM3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM3_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.700e-28 Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 1 Query: 82 KRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDL 357 KRGAP F L +ILR E +I+WN +G+ FM++D ERFS +VLV H++H+K SSFQRQLNLY FRKI +GPDAG Y H F R+RPED+ Sbjct: 29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDI 120
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.870e-28 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 40 AVVTPDRPDQPRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRR 372 A P PR G+RGAPQ F RKL EIL +E VI W +G +F++ ++E F ++L+ ++RH K+SSFQRQLNLY FRKI KGPD G Y H F R++PE L VRR Sbjct: 86 AAPAPSTQKYPRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A6V2VRS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRS5_HETAK) HSP 1 Score: 126 bits (317), Expect = 1.430e-27 Identity = 61/108 (56.48%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 64 DQPRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRRSVSGS 387 D PR G RGAPQ FARKL +IL E++ VI WNE G+AF +KD++RFSQ+VL+K++RH+ +SSFQRQ+NLY F+KI +GP AG H F R RP+ L V+R S Sbjct: 9 DFPRTGSRGAPQVFARKLYQILLTESKDVICWNEPGTAFFIKDMDRFSQEVLMKYFRHNNYSSFQRQMNLYGFKKISRGPFAGANMHQQFLRGRPDLLVMVKRKPRSS 116
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.460e-27 Identity = 58/106 (54.72%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 70 PRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRRSVSGS 387 PR GKRGAPQAFA KL E+L +E+ ++SW +G AF + D+E+F+ + L+K+++H+ +SFQRQLNLY FRK +KG D+GG+QH F R+RPE L VRR+V S Sbjct: 18 PRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQAS 123
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.230e-26 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 79 GKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRR 372 GKRGAPQAF R+L E+L++E +V+SW + G F++ D++ F LVK+++H+K++SFQRQ NLY FRKI +GPDAG Y H F + R EDL VRR Sbjct: 1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.850e-26 Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 13 MASENAASAAVVTPDRPDQPRHGKRGAPQAFARKLAEILRDEAEAVISWNEAGSAFMVKDVERFSQDVLVKHYRHSKFSSFQRQLNLYQFRKIVKGPDAGGYQHPMFHRERPEDLCHVRRS 375 +A A VVT D PR GKRGAPQ F RKL E+L E AVI W+E G F+++D++ F+++ L ++++H KF+SFQRQLNLY FRKI KG G Y HP F R+ PE L VRR+ Sbjct: 30 LAPSEARRTMVVTEDYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRRT 150 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig829.17298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig829.17298.1 >prot_L-elsbetiae_contig829.17298.1 ID=prot_L-elsbetiae_contig829.17298.1|Name=mRNA_L-elsbetiae_contig829.17298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=693bp MASENAASAAVVTPDRPDQPRHGKRGAPQAFARKLAEILRDEAEAVISWNback to top mRNA from alignment at L-elsbetiae_contig829:8214..14140+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig829.17298.1 ID=mRNA_L-elsbetiae_contig829.17298.1|Name=mRNA_L-elsbetiae_contig829.17298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5927bp|location=Sequence derived from alignment at L-elsbetiae_contig829:8214..14140+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig829:8214..14140+ >mRNA_L-elsbetiae_contig829.17298.1 ID=mRNA_L-elsbetiae_contig829.17298.1|Name=mRNA_L-elsbetiae_contig829.17298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4158bp|location=Sequence derived from alignment at L-elsbetiae_contig829:8214..14140+ (Laminarionema elsbetiae ELsaHSoW15)back to top |