mRNA_L-elsbetiae_contig828.17286.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig828.17286.1
Unique NamemRNA_L-elsbetiae_contig828.17286.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 2.060e-74
Identity = 166/419 (39.62%), Postives = 217/419 (51.79%), Query Frame = 1
Query:   22 IQAAGRQRRKLMHEAWKDIDNGWQDLEQRLIGVGITK--SSEEGLVRL-----------------------------FERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYIRHALGL----------------------------------PDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTSPGTRHSIVGGFSSVPWTPNIQG---YSSSLGAFVFMLKD---GRSTTFKPVKWRNKEGKSGTAVWRHLCDLPCFGDHDLGMTLSNMS--TLSTGNKFYDIPTGSPFLSLDAHVVTEIEVFRVVPLAAATLPPGLEAK---PKRNFGLIDLLAFDTAMVSAESGREDDINTFGLSIANSLMEERMALRQAHDKL 1050
            ++A   QRRK M +AW+D+D GW +L Q  I  GITK   S++G++RL                             FE VWD RLPRD+DG +VLDESP CVK+++H+L+ +SGA  G+    L  GD L  DE  YLPY+  ALGL                                  P   +T+ L+YRASRDG +P  FH+ CG ++  T+TL RV     G   SIVGGFSSVPW+P+  G     SSLGAF+FMLKD   G   +F+PVKW  ++   G  V       P FG  DL +  +N    TL      YD+P+GS F +L+   +TEIEVF+V   AA T  P    K   P+   G +   + +TA   A S    D  TFG +IA +LMEER+AL QA  +L
Sbjct:    1 MEAVLSQRRKEMSQAWEDVDRGWHELNQCRIDAGITKPSGSQQGMLRLNVGGSHLNFRRCILAGRKEPSATWALGNLFESVWDDRLPRDSDGRIVLDESPACVKHLIHSLIESSGAAPGS----LPRGDTLALDEMVYLPYVARALGLSAYIPRQGMEVVGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRV-----GASQSIVGGFSSVPWSPHAYGGDSIMSSLGAFIFMLKDSDMGGPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANS----DAETFGNAIAGALMEERIALHQAEAEL 406          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 4.290e-64
Identity = 165/419 (39.38%), Postives = 206/419 (49.16%), Query Frame = 1
Query:   22 IQAAGRQRRKLMHEAWKDIDNGWQDLEQRLIGVGITK--SSEEGLVRL------------------------------FERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYIRHALGL----------------------------------PDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTSPGTRHSIVGGFSSVPWTPNIQGYS------SSLGAFVFMLKD-GR-STTFKPVKWRNKEGKSGTAVWRHLCDLPCFGDHDLGMTLS-NMSTLSTGNKFYDIPTGSPFLSLDAHVVTEIEVFRVVPLAAATLPPGLEAKPKRNFGLIDLLAFDTAMVSAESGREDDINTFGLSIANSLMEERMALRQAHDKLA 1053
            ++AA  QRR  M   W  ID GWQ L +R+  VGITK   S+EG+V+L                              FE  WDKR+PRD+DG +VLDESPTCVK ++H LL AS +   T       GD    ++ A L Y    LGL                                  P     L+L+YRASRDG     F++RC  D+  TVTL RV     G   SI+GGFSSVPW+P IQ YS       S GAFVF+LKD G+ S+TF P+KW  K G +  AV    C  PCFG+ DL +  + NMST+ T N  YD+P GS FL L+   + +IE FRV      TLP    AK +   G        T   +A     DD+ TFG  IA+SLME  M L+ A  +LA
Sbjct:   23 MEAALSQRRLEMDHEWDSIDEGWQTLRERMTEVGITKPLESKEGIVKLNVGGLLLAFRRSVLDSEGKQQPPTWALGNLFEAEWDKRVPRDSDGHIVLDESPTCVKQLVHRLLTASSSSKATVGRA---GDFARNEDPALLHYTAGVLGLSGCLAPVGMSIQGGTTIFEPHETSKLTAVVQDWCPGHPGGLELLYRASRDGWNGATFNARCKGDSPSTVTLLRVKGCETGGTDSIIGGFSSVPWSPAIQNYSYGYYLRGSPGAFVFILKDEGKGSSTFPPMKWGVKNGLAAKAV-NQGCG-PCFGECDLKVNWNGNMSTVGTDNSTYDVPAGSHFLQLNGRHLLDIEAFRVCSKPTHTLPL---AKQEHRAGE------GTNTPTAPVRTSDDVPTFGQLIADSLMEAEMVLQDAGIELA 427          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 4.000e-59
Identity = 137/352 (38.92%), Postives = 184/352 (52.27%), Query Frame = 1
Query:    7 ANTDEIQAAGRQRRKLMHEAWKDIDNGWQDLEQRLIGVGITK--SSEEGLVRL-----------------------------FERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYIRHALGL----------------------------------PDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTSPGTRHSIVGGFSSVPWTPNIQG---YSSSLGAFVFMLKD---GRSTTFKPVKWRNKEGKSGTAVWRHLCDLPCFGDHDLGMTLSNMS-TLSTGNKFYDIPTGSPFLSLDAHVVTEIEVFRV 846
            A + E++AA  QRRK M +AW+D++ GW +L Q  I  GITK   S+EG++RL                             FE VWD RLPRD+DG +VLD+SP CVK ++H+L+ +SGA  G+    L  G+ L PDE AYLP++  ALGL                                  P   +T+ L+YRASRD  +P  FH+ CG ++  T+TL RV     G   SIVGGFSSVPW+P+  G     SSLGAF+FMLKD   G   +F+PVKW  ++   G  V       P FG  DL +  + +  TL      YD+P+   F +L+   +TEIEVF+V
Sbjct:   18 AYSKEMEAALGQRRKGMSQAWEDVERGWHELNQCRIDAGITKPFGSQEGMLRLNVGGSHLRFRRCVLDGKKEPSATWALGNLFESVWDDRLPRDSDGRIVLDKSPACVKDLIHSLIESSGAAPGS----LPRGETLAPDEMAYLPHVARALGLSAYIPLQGMEVVGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRV-----GASASIVGGFSSVPWSPHAYGGDSVMSSLGAFIFMLKDSDMGGPNSFQPVKWSKRDNNGGYDVVVGASRGPFFGRTDLVVNFTYVPVTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV 360          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 5.730e-55
Identity = 155/383 (40.47%), Postives = 200/383 (52.22%), Query Frame = 1
Query:    1 FDANTDEIQAAGRQRRKLMHEAWKDIDNGWQDLEQRLIGV-GITKSSEEGLVRLFERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGA-----PLG------------TAKLTLLMGDGLPPDE--QAYLPYIRHALGLPDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRV-SHTSPGTRHSIVGGFSSVPWTPNIQGYSSSLGAFVFMLKDGR---STTFKPVKWRNKEGKS---GTAVWRHLCDLPCFGDHDLGMTL--SNMSTLSTGNKFYDIPTGSPFLSLDAHVVTEIEVFRVVPLAAA-TLPPGLEAKPKRNF--GLIDLLAFDTAMVSAESGREDDINTFGLSIANSLMEERMALRQAHDKLA 1053
            FDAN  E++AA RQ R  ++ AW  ID    DLE R++ V G   S    L  LFE +WDKR+PRDA+G +VLDESP CVK++L ALL  SGA     P G            T+  +  + +  P  +  Q + P      G P   S L L+YRASRDG   EAFH  CGKD+  T+TL+RV S        +IVGGFS   W+ +      S  AF+ M+K G    S++F+P KW  + G     GT+        PCFG  DL M+L   N   L      +++   S F +L    V EIEVFRV   A A + PP   AKP      GLIDL +   +  + ES  +DD+   G  IA SLMEER ALR+A  +LA
Sbjct:   17 FDANVSEMEAALRQSRTELNAAWDGIDKHRGDLEARMVEVDGDGISPTWNLCDLFESMWDKRIPRDANGLIVLDESPICVKHLLRALLKKSGAAALDSPFGCSGQGWLRTRWPTSPRSWRLSEVCPLTDILQGWCP------GNP---SRLHLIYRASRDGWGGEAFHECCGKDSPVTITLFRVLSSAGTAVTDTIVGGFSRSSWSNSCPFSRFSPDAFICMVKYGSADGSSSFQPSKWIPRRGLPNYLGTSSHG-----PCFGS-DLCMSLHDDNARFLHVAIGAFNVSEDSAFFTLGGQTVKEIEVFRVCREATAGSPPPPPRAKPATTSENGLIDLTSGGPSDAATES-YDDDVRMSGALIAESLMEERAALREAFAELA 383          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.320e-51
Identity = 139/382 (36.39%), Postives = 187/382 (48.95%), Query Frame = 1
Query:    1 FDANTDEIQAAGRQRRKLMHEAWKDIDNGWQDLEQRLI-GVGITKSSEEGLVRLFERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYIRHALGL-------------------PDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPT-VTLYRVSHTSPGTRHSIVGGFSSVPWTPNIQG-----YSSSLGAFVFMLKDGR---STTFKPVKWRNKEGKSGTAVWRHLCDLPCFGD-HDLGMTLSNM-STLSTGNKFYDIPTGSPFLSLDAHVVTEIEVFRVVPLAAATLPPGLEAKPKRNFGLIDLLAFDTAMVSAESGREDDINTFGLSIANSLMEERMALRQAHDKLA 1053
             +A+    +AA  QRR+ M +AW D D GWQ+L+  +  G G   SS   L  LFE  WDKR+PRDADG +VLDESP CVK+++ ALL    A  GTA     M     PD      +    LGL                   P   S L  V +    G    A   RCG  +SPT +T  RV          I+GGFSS+PW   +       YS S GAF+FMLKDG    S  ++  KW  K+G+S  AV+R     PCFG+  DL +  +   S + TGN+ Y  PTGSPF  L+   + ++E FRV P      P    +  K+    ++    D     A     DD+ +FG  +A+SLMEE   L++A ++L+
Sbjct:    1 MEASARATEAALSQRRREMDQAWDDTDQGWQELQAHMTEGKGEQPSSTWALGDLFEAEWDKRVPRDADGRIVLDESPICVKHLIEALLLRPNAANGTATGEADMSRDDQPD---LFHHTARVLGLSGQLAPVGMTIKGGTTTFDPHEASKLTAVVQRWCPGNPGAACQDRCGDQSSPTTITFLRVKGRGAAATDCIIGGFSSIPWDDFMYDSDAGYYSPSPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYRGQGYGPCFGEGRDLHVVWNGTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPK-----PNTPTSSTKQEDHAVE----DKTGPGAPVKTADDVRSFGDLVADSLMEEEKLLQEAANELS 370          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 4.410e-50
Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 2
Query: 1052 LTEANAKAAAAVNALAAVFGPGVAGGEEEDFVIELSVRGTRMTTLRSTLQACPDSALAARFDEDKWPATEKDVDERGRRMIDCSPSVFSKVLDVLRMRKRASWAAGSEVCCGDCGARVAVRAGDRAAFEEFVGMYFPGRESFIMDMV 1492
            L+ A A+  A   ALAAV+GP VA G+EED V+ELSVRGT M TLRSTL+ CP SALAARFDEDKWPA +KDVD  GRR+IDC PSVFSKVLDVLRM KR  WA   ++   +   RV ++AGDR AFEEFV MYF G ESFIM+ V
Sbjct:   14 LSPAKARTTACATALAAVYGPDVANGQEED-VVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPRVTIKAGDRFAFEEFVDMYFKGCESFIMEHV 159          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 4.190e-44
Identity = 138/406 (33.99%), Postives = 187/406 (46.06%), Query Frame = 1
Query:   55 MHEAWKDIDNGWQDLEQRL--IGVGITKSSEEGLVRL------------------------------FER-VWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYIRHALGLPDLRST------------------------------LDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTSPGTRHSIVGGFSSVPWTPNIQGYSSSLGAFVFMLKDG--RSTTFKPVKW--RNKEGKSGTAVWRHLCDLPCFG-------DHDLGMTLSNMSTLSTGNKFYDIPTGSPFLSLDAHVVTEIEVFRVVPLAAATLPPGLEAKPKRNFGLIDLLAFDTAMVSAESGREDDINTFGLSIANSLMEERMALRQAHDKL 1050
            M + W  +D+GW+ LE ++   G+ +  S +  +VRL                              FE  VWDKRLPR  DG +VLDESP CV+ +L    +AS    G +          P DE+ Y+  +  ALGL DL  T                              L+L+YRASRDG + +A H+RCG D+  T++L+RV      T  SIVGGFSSVPWT  +   +  L +F+F+LKDG   S  F+P  W  R +  K   A      D+  FG         DL +  +N  TL  GN+ Y +P G  F+ L    + ++EVFRV      TLP      P    GLID  A+  A   +    E+D+  FG SIA SL +ER AL  A  +L
Sbjct:    1 MKKEWDKLDSGWEALESKMNETGMSMVSSIQPSIVRLNVGGLDVNIARSVLRKAGESSSSTWTLGDLFEGCVWDKRLPRCEDGRIVLDESPVCVEELL---CDASSKRPGNSNF--------PDDEKPYIGGVASALGL-DLGMTVPGGSTTLPHDEAERLTATILGWCPGRPEGLELLYRASRDGWSGDALHARCGDDSPSTISLFRVKTQDANTSDSIVGGFSSVPWTA-LPPENRGLDSFLFILKDGIEESHNFQPAIWGLRIRNPKPSGAY-----DMEKFGLIFGRGRIFDLSVVWTNQ-TLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRVRQ-TMGTLP----TTPPTVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQREL 382          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 3.000e-42
Identity = 100/180 (55.56%), Postives = 119/180 (66.11%), Query Frame = 2
Query:  953 RAVVKMTSTPLGYLSPILSWRSGWRCAKLTTS*LTEANAKAAAAVNALAAVFGPGVAGGEEEDFVIELSVRGTRMTTLRSTLQACPDSALAARFDEDKWPATEKDVDERGRRMIDCSPSVFSKVLDVLRMRKRASWAAGSEVCCGDCGARVAVRAGDRAAFEEFVGMYFPGRESFIMDMV 1492
            R   K T+T       +  +++ WR   LTT+  T           ALAAV+ P +A G E DF+ ELSVRGTRMTTLRSTL+ CPDSALA RFDEDKWPA +KD+D  GRR+IDC P+VFSKVLDVLRM  RASWA   +    +   RV ++ GDR AFEEFVGM FPG ES I+D V
Sbjct:  241 RVCPKPTNTSSSAKGNLTPYKTQWRRRHLTTTYAT-----------ALAAVYCPDMAMGLEVDFM-ELSVRGTRMTTLRSTLRVCPDSALATRFDEDKWPAAKKDLDSNGRRVIDCKPAVFSKVLDVLRMATRASWAGSEKSQQVNEKPRVTMKVGDRVAFEEFVGMNFPGCESCILDFV 408          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.510e-40
Identity = 138/422 (32.70%), Postives = 175/422 (41.47%), Query Frame = 1
Query:   55 MHEAWKDIDNGWQDLEQRLIGVGITKSSEEG------------------------------LVRLFERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYIRHALGLPD-------------------------LRST-----------LDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTS--PGTRHSIVGGFSSVPWTPNIQGYS---SSLGAFVFMLKDGRSTTFKPVKWRNKEGKSGTAVWRHLCDLPCFGDHDL-----------GMTLSNMSTLSTGNKF--------YDIPTGSPFLSLDAHVVTEIEVFRVVPLAAATLPPGLEAKPKRNFGLIDLLAFDTAMVSAESGREDDINTFGLSIANSLMEERMALRQAHDKL 1050
            M + W+++  G Q LEQ     G+ +S+ E                               L  LF+  WD+RLPRDA+G +VLDESP C K+++ AL                 G  LP DEQAYLPY+ +ALG+P                          L  T           LDL+YRASRDG     FH+RCG D+  TVTLYR++  S   G   S++G FSSVPWTP   GY+   SS G FVF+L DG S +F+P K      K      +  C L   G+  +           G       T  T  K+        + +P G  FL  D   V EIEV+RV                                 SAE  R DDI+ FG SIA S  EE  AL +A  KL
Sbjct:    1 MKKEWEEVAEGRQKLEQLETESGMLRSTFEDDTLTLNVGGSNVDISRADLQRLPALSEAWKLANLFDSDWDERLPRDANGLMVLDESPVCFKHLVDAL-----------------GGVLPTDEQAYLPYVSNALGVPSPARVPRRRVDSEGSAMLGIGGELDRLARTVLDWCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLNDASNRKGLNCSVLGCFSSVPWTPPSDGYTKLKSSPGGFVFILTDG-SRSFRPTKL-----KVHPHYAKRGCGLVVLGEGSMPSFHVDLEVFHGKERHRSCTSGTNAKYRLWTDSGAFYVPEGCSFLKYDGIDVAEIEVYRVW--------------------------------SAEEERSDDIHRFGGSIAASFEEEHKALHKAQSKL 367          
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Match: D7FIY4_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIY4_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.570e-40
Identity = 106/271 (39.11%), Postives = 129/271 (47.60%), Query Frame = 1
Query:    1 FDANTDEIQAAGRQRRKLMHEAWKDIDNGWQDLEQRLIGVGITKSSE--EGLVRL----------------------------FERVWDKRLPRDADGFVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQA-YLPYIRHALGL----------------------------------PDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTSPGTRHSIVGGFSSVPWTP--NIQGYSSSLGAFVFMLKD 612
             +A+  E      QRRK+M +AW DID GWQ L++ +  +GITK  +  EGLV+L                             E  WDKR+PRD+DG +VLDESPTCVK + H LL     P   AK T++  D    DE    L Y  H LGL                                  P     L+L+YRASRDG    AF + CG D   TVT +RV     G   SIVGGFSSVPWTP     GY++S GAF+FMLKD
Sbjct:   80 LEASARETNDILSQRRKVMDQAWADIDEGWQALQEHMAKIGITKPLDLKEGLVKLNVGGSLLAFRRSVFEGKGKGATSALGSLCEAEWDKRIPRDSDGRIVLDESPTCVKRLFHDLLT----PPSLAKGTVVREDNFASDETPDLLRYTAHVLGLSWHLAPIGMSITGGTTIFEPHEASRLTAVIQGWCPGHPGRLELLYRASRDGWNSAAFQATCGDDRPSTVTFFRVKGQGTGGTDSIVGGFSSVPWTPPGGSTGYTASPGAFLFMLKD 346          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig828.17286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2H5_ECTSI2.060e-7439.62TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5LAP0_9PHAE4.290e-6439.38TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L232_9PHAE4.000e-5938.92TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KTF6_9PHAE5.730e-5540.47TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIX7_ECTSI1.320e-5136.39BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIX8_ECTSI4.410e-5065.99BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIV0_ECTSI4.190e-4433.99TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JQU4_9PHAE3.000e-4255.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR77_ECTSI2.510e-4032.70TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIY4_ECTSI2.570e-4039.11TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig828contigL-elsbetiae_contig828:16520..18167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score86.7
Seed ortholog evalue2.3e-14
Seed eggNOG ortholog35128.Thaps11039
KEGG rclassRC00002,RC00078
KEGG koko:K00849
KEGG ReactionR01092
KEGG Pathwayko00052,ko00520,ko01100,map00052,map00520,map01100
KEGG ModuleM00554,M00632
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sterile alpha motif.
EggNOG OGs2XF76@2836,KOG2723@1,KOG2723@2759
EC2.7.1.6
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons3
Model size1492
Cds size1005
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig828.17286.1prot_L-elsbetiae_contig828.17286.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig828 16953..18113 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.4512916-UTR-L-elsbetiae_contig828:16519..169521622816911.4512916-UTR-L-elsbetiae_contig828:16519..16952Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 16520..16952 -
1691683906.3318398-UTR-L-elsbetiae_contig828:16519..169521691683906.3318398-UTR-L-elsbetiae_contig828:16519..16952Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 16520..16952 -
1622816911.5090964-UTR-L-elsbetiae_contig828:18113..181671622816911.5090964-UTR-L-elsbetiae_contig828:18113..18167Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 18114..18167 -
1691683906.3743923-UTR-L-elsbetiae_contig828:18113..181671691683906.3743923-UTR-L-elsbetiae_contig828:18113..18167Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 18114..18167 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.4682186-CDS-L-elsbetiae_contig828:16952..176211622816911.4682186-CDS-L-elsbetiae_contig828:16952..17621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 16953..17621 -
1691683906.3462565-CDS-L-elsbetiae_contig828:16952..176211691683906.3462565-CDS-L-elsbetiae_contig828:16952..17621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 16953..17621 -
1622816911.4811044-CDS-L-elsbetiae_contig828:17693..179281622816911.4811044-CDS-L-elsbetiae_contig828:17693..17928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 17694..17928 -
1691683906.3548827-CDS-L-elsbetiae_contig828:17693..179281691683906.3548827-CDS-L-elsbetiae_contig828:17693..17928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 17694..17928 -
1622816911.497604-CDS-L-elsbetiae_contig828:18012..181131622816911.497604-CDS-L-elsbetiae_contig828:18012..18113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 18013..18113 -
1691683906.3637788-CDS-L-elsbetiae_contig828:18012..181131691683906.3637788-CDS-L-elsbetiae_contig828:18012..18113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 18013..18113 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig828.17286.1

>prot_L-elsbetiae_contig828.17286.1 ID=prot_L-elsbetiae_contig828.17286.1|Name=mRNA_L-elsbetiae_contig828.17286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=335bp
MHEAWKDIDNGWQDLEQRLIGVGITKSSEEGLVRLFERVWDKRLPRDADG
FVVLDESPTCVKYILHALLNASGAPLGTAKLTLLMGDGLPPDEQAYLPYI
RHALGLPDLRSTLDLVYRASRDGRAPEAFHSRCGKDTSPTVTLYRVSHTS
PGTRHSIVGGFSSVPWTPNIQGYSSSLGAFVFMLKDGRSTTFKPVKWRNK
EGKSGTAVWRHLCDLPCFGDHDLGMTLSNMSTLSTGNKFYDIPTGSPFLS
LDAHVVTEIEVFRVVPLAAATLPPGLEAKPKRNFGLIDLLAFDTAMVSAE
SGREDDINTFGLSIANSLMEERMALRQAHDKLAY*
back to top

mRNA from alignment at L-elsbetiae_contig828:16520..18167-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig828.17286.1 ID=mRNA_L-elsbetiae_contig828.17286.1|Name=mRNA_L-elsbetiae_contig828.17286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1648bp|location=Sequence derived from alignment at L-elsbetiae_contig828:16520..18167- (Laminarionema elsbetiae ELsaHSoW15)
TTTGATGCCAACACGGACGAGATACAGGCAGCTGGTCGGCAACGACGTAA ACTCATGCACGAAGCGTGGAAGGACATCGACAACGGCTGGCAAGACCTTG AGCAGCGCTTGATTGGGGTGGGGATCACCAAAAGCTCCGAGGAAGGACTG GTGCGGTTGAACGTGGGTGGCTCACACGTTAGCGTCTGCCAATCCGTCCT CAGCCGGCAAGAATATCCTGAAACTAACACACTCGCTAGCCTGTTCGAGA GGGTGTGGGACAAGAGGCTACCGAGGGATGCGGACGGCTTCGTCGTTTTG GACGAATCTCCCACATGCGTAAAGTATATCTTGCATGCACTTCTCAACGC ATCTGGTGCTCCCTTGGGCACGGCCAAGCTGACACTGCTGATGGGTGATG GCCTTCCTCCTGACGAGCAAGCTTACCTACCCTACATCCGCCACGCTCTT GGGCTTCCCGATCTCCGCAGTACCGTGATCGAGCCAGATTAATTTTGTCT GATGAGGGCGACTCTCCTGGGCTGGTGCTTTGGCAGGCCGTCTGAGCTGG ATTTGGTGTATCGGGCGTCACGCGACGGTCGTGCTCCTGAGGCGTTTCAT TCAAGATGCGGGAAGGACACCTCTCCAACGGTCACGCTGTACCGTGTATC GCACACTAGCCCGGGAACACGCCATAGCATCGTGGGGGGCTTCTCCAGCG TTCCCTGGACTCCGAATATCCAGGGATACAGTTCGTCGCTAGGAGCCTTC GTGTTCATGCTCAAGGACGGCAGGTCGACCACGTTCAAACCCGTGAAATG GAGGAACAAAGAAGGAAAGAGTGGGACTGCCGTATGGCGTCATCTCTGTG ATTTACCATGCTTTGGGGATCATGACTTAGGGATGACTCTTTCAAACATG AGCACTCTTAGTACCGGAAACAAATTTTACGACATCCCCACCGGGTCTCC CTTTCTGAGTCTCGACGCCCATGTGGTGACGGAGATCGAGGTGTTCCGGG TGGTGCCCCTGGCAGCGGCAACACTACCCCCGGGGCTTGAGGCGAAGCCC AAAAGGAACTTCGGCTTGATCGACCTTCTGGCGTTTGATACCGCCATGGT CTCCGCGGAGAGCGGTCGTGAAGATGACATCAACACCTTTGGGCTATCTA TCGCCAATTCTCTCATGGAGGAGCGGATGGCGCTGCGCCAAGCTCACGAC AAGCTAGCTTACTGAGGCCAATGCCAAGGCCGCAGCGGCGGTCAACGCTC TAGCTGCCGTATTCGGGCCGGGTGTGGCTGGGGGGGAGGAAGAGGACTTT GTCATCGAGCTCAGCGTCCGCGGGACAAGGATGACGACGCTACGCTCCAC TCTCCAGGCTTGCCCAGACTCCGCCTTGGCCGCTCGCTTCGACGAGGACA AGTGGCCTGCAACCGAGAAGGACGTGGACGAGCGCGGTCGGCGGATGATA GACTGCAGTCCTTCCGTGTTCTCGAAGGTCTTGGACGTGCTGCGGATGAG GAAACGGGCGTCTTGGGCTGCTGGTAGCGAGGTGTGTTGTGGCGATTGCG GTGCTCGCGTTGCGGTGAGAGCTGGCGACCGTGCGGCTTTTGAAGAGTTC GTGGGCATGTACTTTCCGGGCCGCGAGAGCTTCATCATGGACATGGTA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig828:16520..18167-

>mRNA_L-elsbetiae_contig828.17286.1 ID=mRNA_L-elsbetiae_contig828.17286.1|Name=mRNA_L-elsbetiae_contig828.17286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2010bp|location=Sequence derived from alignment at L-elsbetiae_contig828:16520..18167- (Laminarionema elsbetiae ELsaHSoW15)
ATGCACGAAGCGTGGAAGGACATCGACAACGGCTGGCAAGACCTTGAGCA
GCGCTTGATTGGGGTGGGGATCACCAAAAGCTCCGAGGAAGGACTGGTGC
GATGCACGAAGCGTGGAAGGACATCGACAACGGCTGGCAAGACCTTGAGC
AGCGCTTGATTGGGGTGGGGATCACCAAAAGCTCCGAGGAAGGACTGGTG
CGCCTGTTCGAGAGGGTGTGGGACAAGAGGCTACCGAGGGATGCGGACGG
CTTCGTCGTTTTGGACGAATCTCCCACATGCGTAAAGTATATCTTGCATG
CACTTCTCAACGCATCTGGTGCTCCCTTGGGCACGGCCAAGCTGACACTG
CTGATGGGTGATGGCCTTCCTCCTGACGAGCAAGCTTACCTACCCTACAT
CCGCCACGCTCTTGGGCTTCCCGATCTCCGCAGTACCCCTGTTCGAGAGG
GTGTGGGACAAGAGGCTACCGAGGGATGCGGACGGCTTCGTCGTTTTGGA
CGAATCTCCCACATGCGTAAAGTATATCTTGCATGCACTTCTCAACGCAT
CTGGTGCTCCCTTGGGCACGGCCAAGCTGACACTGCTGATGGGTGATGGC
CTTCCTCCTGACGAGCAAGCTTACCTACCCTACATCCGCCACGCTCTTGG
GCTTCCCGATCTCCGCAGTACCCTGGATTTGGTGTATCGGGCGTCACGCG
ACGGTCGTGCTCCTGAGGCGTTTCATTCAAGATGCGGGAAGGACACCTCT
CCAACGGTCACGCTGTACCGTGTATCGCACACTAGCCCGGGAACACGCCA
TAGCATCGTGGGGGGCTTCTCCAGCGTTCCCTGGACTCCGAATATCCAGG
GATACAGTTCGTCGCTAGGAGCCTTCGTGTTCATGCTCAAGGACGGCAGG
TCGACCACGTTCAAACCCGTGAAATGGAGGAACAAAGAAGGAAAGAGTGG
GACTGCCGTATGGCGTCATCTCTGTGATTTACCATGCTTTGGGGATCATG
ACTTAGGGATGACTCTTTCAAACATGAGCACTCTTAGTACCGGAAACAAA
TTTTACGACATCCCCACCGGGTCTCCCTTTCTGAGTCTCGACGCCCATGT
GGTGACGGAGATCGAGGTGTTCCGGGTGGTGCCCCTGGCAGCGGCAACAC
TACCCCCGGGGCTTGAGGCGAAGCCCAAAAGGAACTTCGGCTTGATCGAC
CTTCTGGCGTTTGATACCGCCATGGTCTCCGCGGAGAGCGGTCGTGAAGA
TGACATCAACACCTTTGGGCTATCTATCGCCAATTCTCTCATGGAGGAGC
GGATGGCGCTGCGCCAAGCTCACGACAAGCTAGCTTACTGACTGGATTTG
GTGTATCGGGCGTCACGCGACGGTCGTGCTCCTGAGGCGTTTCATTCAAG
ATGCGGGAAGGACACCTCTCCAACGGTCACGCTGTACCGTGTATCGCACA
CTAGCCCGGGAACACGCCATAGCATCGTGGGGGGCTTCTCCAGCGTTCCC
TGGACTCCGAATATCCAGGGATACAGTTCGTCGCTAGGAGCCTTCGTGTT
CATGCTCAAGGACGGCAGGTCGACCACGTTCAAACCCGTGAAATGGAGGA
ACAAAGAAGGAAAGAGTGGGACTGCCGTATGGCGTCATCTCTGTGATTTA
CCATGCTTTGGGGATCATGACTTAGGGATGACTCTTTCAAACATGAGCAC
TCTTAGTACCGGAAACAAATTTTACGACATCCCCACCGGGTCTCCCTTTC
TGAGTCTCGACGCCCATGTGGTGACGGAGATCGAGGTGTTCCGGGTGGTG
CCCCTGGCAGCGGCAACACTACCCCCGGGGCTTGAGGCGAAGCCCAAAAG
GAACTTCGGCTTGATCGACCTTCTGGCGTTTGATACCGCCATGGTCTCCG
CGGAGAGCGGTCGTGAAGATGACATCAACACCTTTGGGCTATCTATCGCC
AATTCTCTCATGGAGGAGCGGATGGCGCTGCGCCAAGCTCACGACAAGCT
AGCTTACTGA
back to top