mRNA_L-elsbetiae_contig828.17284.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A6H5KR44_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR44_9PHAE) HSP 1 Score: 259 bits (662), Expect = 6.330e-80 Identity = 169/225 (75.11%), Postives = 178/225 (79.11%), Query Frame = 3 Query: 6 RSIELGVGVARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAAS-----APEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASV---VEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLD 656 RS EL V R +SLP+HIVVGMPALSPTMTHGNIG+WGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVTVD+ADSVAAFKDF+A+AV +GE EAA+ AP P AA XXXXXX XXXXXXXXXX VE PPAPVSS LVFKRDWGSGV GS L HRMSAEQKKYV+RFGSTLQQPLD Sbjct: 29 RSAELVVNT-RSLSSLPDHIVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAV--QGEPEAAAPAAEAAPTPXXXXXXXAAKXXXXXXPEAXXXXXXXXXXXXXXXXXXSVEQPPAPVSSQE----LVFKRDWGSGVRGSALAHRMSAEQKKYVKRFGSTLQQPLD 246
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: D8LTQ3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ3_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.320e-70 Identity = 147/202 (72.77%), Postives = 154/202 (76.24%), Query Frame = 3 Query: 81 ALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXA----------TAASVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLD 656 ALSPTMTHGNIG+WGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVTVD+ADSVAAFKDF+A+AV +GE EAA+ XXXXXXXXXX X T A+ VE PPAPVSSP LVFKRDWGSGV GS L HRMSAEQKKYVERFGSTLQQPLD Sbjct: 25 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAV--QGEPEAAAXXXXXXXXXXXXXXXXXXXXXXXPAPEAAPAPXXXXXXXXXXXXTTAAPVERPPAPVSSPE----LVFKRDWGSGVRGSALAHRMSAEQKKYVERFGSTLQQPLD 220
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A836CM78_9STRA (Putative dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM78_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.930e-42 Identity = 111/218 (50.92%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 36 RCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEE-----GEVEAASAPEPVVEE-------KVAAAXXXXXXXXXXXXXXXXXXXXATAA--SVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQ 647 R A+LP H +VGMPALSPTM HGN+ W K GDEIAAGD++C+VETDKATVDF+AQD+ F+AK LV G Q I VG PI +TV++ DSVAAF+ ++A A E A+A P V KV A XXXXXXXXXX AT A S +AP AP +P A+V +WG V SPL +R+S EQK Y RFG+TLQ+ Sbjct: 32 RAMATLPSHTLVGMPALSPTMEHGNLAKWLKAAGDEIAAGDIICQVETDKATVDFEAQDEGFVAKLLVPEGAQSITVGDPILITVEDKDSVAAFESYEAPATKEAPXXXXXXXXVAAATPPAVSPXXXAEAPKVEAVKPKTMPPPXXXXXXXXXXAKATEAAKSAQKAPDAPAGAPTASV------NWGQRVSRSPLYYRLSQEQKLYSSRFGATLQE 243
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A7S2DWD0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWD0_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.300e-37 Identity = 117/220 (53.18%), Postives = 141/220 (64.09%), Query Frame = 3 Query: 3 GRSIELGVGVA---RCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPL 653 GR + G+ A R F++LP H VVG+PALSPTM G I W K GDEIAAGDVVC++ETDKATVDF+AQD+S +AK LVEAG + +PVG PI V VDE D VAAF DF +A +A V + XXXXXXXXXXXXXXXXXXXX A V APP T FKR WG+ V SPL +M+ +Q +Y+ ++GSTLQ P+ Sbjct: 22 GRHLARGLNEAPLLRAFSALPPHEVVGLPALSPTMEMGTIAEWLKAPGDEIAAGDVVCQIETDKATVDFEAQDESVLAKILVEAGAE-VPVGVPICVMVDEVDDVAAFSDFVVEAXXXXXXXXXXTAAPVVTAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXADV--APPQVT-----TTTYAFKR-WGTKVSTSPLATKMAKDQIEYISKYGSTLQVPI 232
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A485LRT4_9STRA (Aste57867_24277 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRT4_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.190e-36 Identity = 93/228 (40.79%), Postives = 121/228 (53.07%), Query Frame = 3 Query: 36 RCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAAS---VVEAP--PAPVSSPGAT----------------VGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLD 656 R FASLP H VVG+PALSPTM GN+ W +EGD I+AGDV+C++ETDKA VD++AQDD F+A+ LV G + I VG PI VTVD AD VAAFKDF A +V A AP P E++ T+ + +V P PAPV++P L WG GV+ S ++H ++ QK YV +GST P++ Sbjct: 23 RHFASLPAHEVVGLPALSPTMEQGNLAKWNLKEGDAISAGDVICQIETDKAIVDYEAQDDMFLARILVPEGAEGIVVGQPIMVTVDSADDVAAFKDFVA-------DVAATPAPAPKSPEEIPPKKHEVKVDPATQAPVVPMDFLVTSQTPQKIVAGPAIPAPVATPATXXXXXXXXXXXXXXXXXANLASFSKWGLGVNKSAISHSLAQRQKAYVALYGSTGTFPIE 243
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A6A4A4E2_9STRA (Lipoyl-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A4E2_9STRA) HSP 1 Score: 143 bits (361), Expect = 7.820e-36 Identity = 89/218 (40.83%), Postives = 120/218 (55.05%), Query Frame = 3 Query: 30 VARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQ-------AVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAAS-VVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL 659 V+R FAS P H VVG+PALSPTM GN+ W +EGD I AGD+VCE+ETDKA VD++A DD F+AK L+ GT++IPVG P+ V DE +SVAAFKDF+ + A V GE + E V+ K A AS V +A PAP ++ VF+ WG G+ S ++ + +Q+ Y+ +G T P+ L Sbjct: 22 VSRGFASYPSHEVVGLPALSPTMETGNMSKWNLKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVCDEEESVAAFKDFKLEDAPAAPAAPVLSGEEKPPKKEEVAVDVKTHEPVVPQDFLVTSQTTKKTVPGPAIPASPVAKAAPAPKAA-APVASAVFEEKWGLGIKKSAISTSLIKKQQAYISLYGITGMTPVAL 238
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A7S2SBH8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SBH8_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.540e-34 Identity = 109/213 (51.17%), Postives = 128/213 (60.09%), Query Frame = 3 Query: 51 LPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVV-----------EAPPAPVSSPGATVGLVFKRDWGSGVH-GSPLTHRMSAEQKKYVERFGSTLQQPL 653 LP H+VVGMPALSPTM G I TW EGD AGD + E+ETDKAT+DF+AQD+ +AK L++AG DI VG PI VTV+EAD V+AF +F + VEE E PEPVVEEK A XXXXXXXXXXXXXXXX E P+ S TVG WG+ SPL +S +QKKY+E +GST Q PL Sbjct: 62 LPYHLVVGMPALSPTMETGTIATWKVAEGDSFGAGDSLAEIETDKATIDFEAQDEGVVAKILMQAGVSDIKVGVPILVTVEEADDVSAFANFVPEITVEEPE------PEPVVEEKKPAVVETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVVPSMTSDTVVTVGPA----WGNLARVKSPLAETLSIDQKKYIETYGSTGQIPL 264
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A7R9WUM2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUM2_9STRA) HSP 1 Score: 139 bits (351), Expect = 6.590e-34 Identity = 105/209 (50.24%), Postives = 134/209 (64.11%), Query Frame = 3 Query: 48 SLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGAT-----VGLVFKRDWGSGVH-GSPLTHRMSAEQKKYVERFGSTLQQPLD 656 +LP HIVVGMPALSPTM G + W +EG E AGD + ++ETDKA++DF+AQDD ++AK L +AG +D+PVGTPI VTV+E + VAAFKDF A A E EAA+AP XXXXXXXXXXXXXXXXX A A VV+A V P A V V WG SP+ ++ +Q++Y+E++G+T Q+PLD Sbjct: 96 NLPYHIVVGMPALSPTMDQGTLAEWYLEEGSEFIAGDALAKIETDKASIDFEAQDDGYIAKILKDAGAEDVPVGTPILVTVEEEEDVAAFKDFVAPAA----EPEAAAAP--------XXXXXXXXXXXXXXXXXXXXVVAAAAXPVVDA----VXXPSAADMLEAVAPVLSTGWGRLAQINSPIAKSLAKKQQEYIEKYGTTGQKPLD 288
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A484DRZ7_BRELC (Lipoyl-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRZ7_BRELC) HSP 1 Score: 137 bits (345), Expect = 1.130e-33 Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 3 Query: 30 VARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGATVGLVF-KRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL 659 V+R FAS P H VVG+P+LSPTM GN+ W +EGD I+AGD+VCE+ETDKA VD++A DD F+AK L+ GT+++PVG P+ V VDE DS+AAF+DF+ + E + +P +E V + V AP A ++ +T F K WG + S + + Q+ Y+ ++G T P+ L Sbjct: 19 VSRSFASYPPHEVVGLPSLSPTMETGNMSKWNIKEGDAISAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENVPVGQPMMVVVDEEDSLAAFEDFKLEEASEPPAAPSHIEAKPAQKENVPMDMKAQDGPKSLETKTTNVSEASFPPPHVAAPIAKTTASSSTPSTAFLKESWGFNMKNSATSTSLLKRQQAYIAQYGLTGMTPVVL 229
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A0W8DVI9_PHYNI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVI9_PHYNI) HSP 1 Score: 136 bits (342), Expect = 1.850e-33 Identity = 82/210 (39.05%), Postives = 114/210 (54.29%), Query Frame = 3 Query: 30 VARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL 659 V+R F+S P+H V+G+P+LSPTM GN+ W +EGD I+AGD+VCE+ETDKA VD++A DD ++AK L+ G ++IPVG P+ V VDE +SVAAFKDF+ E A +AP EEK A+A P SS VF+ WG G+ S ++ + +Q+ Y+ +G T P L Sbjct: 22 VSRSFSSYPDHEVIGLPSLSPTMETGNMSKWNMKEGDAISAGDIVCEIETDKAVVDYEATDDMYLAKILIPEGAENIPVGQPMMVVVDEEESVAAFKDFKL-----EDAPSAPAAPALSAEEKPPKKEDVPVDAKTHEPVVPQDFLAASA---------PTSS------AVFEEKWGLGIKKSAISTSLIKKQQAYIALYGITGMTPAAL 211 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig828.17284.1 >prot_L-elsbetiae_contig828.17284.1 ID=prot_L-elsbetiae_contig828.17284.1|Name=mRNA_L-elsbetiae_contig828.17284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp MPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMback to top mRNA from alignment at L-elsbetiae_contig828:1446..5649+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig828.17284.1 ID=mRNA_L-elsbetiae_contig828.17284.1|Name=mRNA_L-elsbetiae_contig828.17284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4204bp|location=Sequence derived from alignment at L-elsbetiae_contig828:1446..5649+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig828:1446..5649+ >mRNA_L-elsbetiae_contig828.17284.1 ID=mRNA_L-elsbetiae_contig828.17284.1|Name=mRNA_L-elsbetiae_contig828.17284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig828:1446..5649+ (Laminarionema elsbetiae ELsaHSoW15)back to top |