mRNA_L-elsbetiae_contig828.17284.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig828.17284.1
Unique NamemRNA_L-elsbetiae_contig828.17284.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A6H5KR44_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR44_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 6.330e-80
Identity = 169/225 (75.11%), Postives = 178/225 (79.11%), Query Frame = 3
Query:    6 RSIELGVGVARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAAS-----APEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASV---VEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLD 656
            RS EL V   R  +SLP+HIVVGMPALSPTMTHGNIG+WGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVTVD+ADSVAAFKDF+A+AV  +GE EAA+     AP P       AA XXXXXX   XXXXXXXXXX         VE PPAPVSS      LVFKRDWGSGV GS L HRMSAEQKKYV+RFGSTLQQPLD
Sbjct:   29 RSAELVVNT-RSLSSLPDHIVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAV--QGEPEAAAPAAEAAPTPXXXXXXXAAKXXXXXXPEAXXXXXXXXXXXXXXXXXXSVEQPPAPVSSQE----LVFKRDWGSGVRGSALAHRMSAEQKKYVKRFGSTLQQPLD 246          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: D8LTQ3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ3_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.320e-70
Identity = 147/202 (72.77%), Postives = 154/202 (76.24%), Query Frame = 3
Query:   81 ALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXA----------TAASVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLD 656
            ALSPTMTHGNIG+WGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDI VGTPIFVTVD+ADSVAAFKDF+A+AV  +GE EAA+             XXXXXXXXXX         X           T A+ VE PPAPVSSP     LVFKRDWGSGV GS L HRMSAEQKKYVERFGSTLQQPLD
Sbjct:   25 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAV--QGEPEAAAXXXXXXXXXXXXXXXXXXXXXXXPAPEAAPAPXXXXXXXXXXXXTTAAPVERPPAPVSSPE----LVFKRDWGSGVRGSALAHRMSAEQKKYVERFGSTLQQPLD 220          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A836CM78_9STRA (Putative dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM78_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.930e-42
Identity = 111/218 (50.92%), Postives = 135/218 (61.93%), Query Frame = 3
Query:   36 RCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEE-----GEVEAASAPEPVVEE-------KVAAAXXXXXXXXXXXXXXXXXXXXATAA--SVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQ 647
            R  A+LP H +VGMPALSPTM HGN+  W K  GDEIAAGD++C+VETDKATVDF+AQD+ F+AK LV  G Q I VG PI +TV++ DSVAAF+ ++A A  E           A+A  P V         KV A         XXXXXXXXXX  AT A  S  +AP AP  +P A+V      +WG  V  SPL +R+S EQK Y  RFG+TLQ+
Sbjct:   32 RAMATLPSHTLVGMPALSPTMEHGNLAKWLKAAGDEIAAGDIICQVETDKATVDFEAQDEGFVAKLLVPEGAQSITVGDPILITVEDKDSVAAFESYEAPATKEAPXXXXXXXXVAAATPPAVSPXXXAEAPKVEAVKPKTMPPPXXXXXXXXXXAKATEAAKSAQKAPDAPAGAPTASV------NWGQRVSRSPLYYRLSQEQKLYSSRFGATLQE 243          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A7S2DWD0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWD0_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.300e-37
Identity = 117/220 (53.18%), Postives = 141/220 (64.09%), Query Frame = 3
Query:    3 GRSIELGVGVA---RCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPL 653
            GR +  G+  A   R F++LP H VVG+PALSPTM  G I  W K  GDEIAAGDVVC++ETDKATVDF+AQD+S +AK LVEAG + +PVG PI V VDE D VAAF DF  +A          +A   V   +    XXXXXXXXXXXXXXXXXXXX   A V  APP        T    FKR WG+ V  SPL  +M+ +Q +Y+ ++GSTLQ P+
Sbjct:   22 GRHLARGLNEAPLLRAFSALPPHEVVGLPALSPTMEMGTIAEWLKAPGDEIAAGDVVCQIETDKATVDFEAQDESVLAKILVEAGAE-VPVGVPICVMVDEVDDVAAFSDFVVEAXXXXXXXXXXTAAPVVTAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXADV--APPQVT-----TTTYAFKR-WGTKVSTSPLATKMAKDQIEYISKYGSTLQVPI 232          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A485LRT4_9STRA (Aste57867_24277 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRT4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.190e-36
Identity = 93/228 (40.79%), Postives = 121/228 (53.07%), Query Frame = 3
Query:   36 RCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAAS---VVEAP--PAPVSSPGAT----------------VGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLD 656
            R FASLP H VVG+PALSPTM  GN+  W  +EGD I+AGDV+C++ETDKA VD++AQDD F+A+ LV  G + I VG PI VTVD AD VAAFKDF A       +V A  AP P   E++                        T+ +   +V  P  PAPV++P                     L     WG GV+ S ++H ++  QK YV  +GST   P++
Sbjct:   23 RHFASLPAHEVVGLPALSPTMEQGNLAKWNLKEGDAISAGDVICQIETDKAIVDYEAQDDMFLARILVPEGAEGIVVGQPIMVTVDSADDVAAFKDFVA-------DVAATPAPAPKSPEEIPPKKHEVKVDPATQAPVVPMDFLVTSQTPQKIVAGPAIPAPVATPATXXXXXXXXXXXXXXXXXANLASFSKWGLGVNKSAISHSLAQRQKAYVALYGSTGTFPIE 243          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A6A4A4E2_9STRA (Lipoyl-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A4E2_9STRA)

HSP 1 Score: 143 bits (361), Expect = 7.820e-36
Identity = 89/218 (40.83%), Postives = 120/218 (55.05%), Query Frame = 3
Query:   30 VARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQ-------AVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAAS-VVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL 659
            V+R FAS P H VVG+PALSPTM  GN+  W  +EGD I AGD+VCE+ETDKA VD++A DD F+AK L+  GT++IPVG P+ V  DE +SVAAFKDF+ +       A V  GE +     E  V+ K                        A  AS V +A PAP ++       VF+  WG G+  S ++  +  +Q+ Y+  +G T   P+ L
Sbjct:   22 VSRGFASYPSHEVVGLPALSPTMETGNMSKWNLKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVCDEEESVAAFKDFKLEDAPAAPAAPVLSGEEKPPKKEEVAVDVKTHEPVVPQDFLVTSQTTKKTVPGPAIPASPVAKAAPAPKAA-APVASAVFEEKWGLGIKKSAISTSLIKKQQAYISLYGITGMTPVAL 238          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A7S2SBH8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SBH8_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.540e-34
Identity = 109/213 (51.17%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   51 LPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVV-----------EAPPAPVSSPGATVGLVFKRDWGSGVH-GSPLTHRMSAEQKKYVERFGSTLQQPL 653
            LP H+VVGMPALSPTM  G I TW   EGD   AGD + E+ETDKAT+DF+AQD+  +AK L++AG  DI VG PI VTV+EAD V+AF +F  +  VEE E      PEPVVEEK  A     XXXXXXXXXXXXXXXX                  E  P+  S    TVG      WG+     SPL   +S +QKKY+E +GST Q PL
Sbjct:   62 LPYHLVVGMPALSPTMETGTIATWKVAEGDSFGAGDSLAEIETDKATIDFEAQDEGVVAKILMQAGVSDIKVGVPILVTVEEADDVSAFANFVPEITVEEPE------PEPVVEEKKPAVVETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVVPSMTSDTVVTVGPA----WGNLARVKSPLAETLSIDQKKYIETYGSTGQIPL 264          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A7R9WUM2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUM2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 6.590e-34
Identity = 105/209 (50.24%), Postives = 134/209 (64.11%), Query Frame = 3
Query:   48 SLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGAT-----VGLVFKRDWGSGVH-GSPLTHRMSAEQKKYVERFGSTLQQPLD 656
            +LP HIVVGMPALSPTM  G +  W  +EG E  AGD + ++ETDKA++DF+AQDD ++AK L +AG +D+PVGTPI VTV+E + VAAFKDF A A     E EAA+AP           XXXXXXXXXXXXXXXXX   A A  VV+A    V  P A      V  V    WG      SP+   ++ +Q++Y+E++G+T Q+PLD
Sbjct:   96 NLPYHIVVGMPALSPTMDQGTLAEWYLEEGSEFIAGDALAKIETDKASIDFEAQDDGYIAKILKDAGAEDVPVGTPILVTVEEEEDVAAFKDFVAPAA----EPEAAAAP--------XXXXXXXXXXXXXXXXXXXXVVAAAAXPVVDA----VXXPSAADMLEAVAPVLSTGWGRLAQINSPIAKSLAKKQQEYIEKYGTTGQKPLD 288          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A484DRZ7_BRELC (Lipoyl-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRZ7_BRELC)

HSP 1 Score: 137 bits (345), Expect = 1.130e-33
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 3
Query:   30 VARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGATVGLVF-KRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL 659
            V+R FAS P H VVG+P+LSPTM  GN+  W  +EGD I+AGD+VCE+ETDKA VD++A DD F+AK L+  GT+++PVG P+ V VDE DS+AAF+DF+ +   E     +    +P  +E V                       +     V AP A  ++  +T    F K  WG  +  S  +  +   Q+ Y+ ++G T   P+ L
Sbjct:   19 VSRSFASYPPHEVVGLPSLSPTMETGNMSKWNIKEGDAISAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENVPVGQPMMVVVDEEDSLAAFEDFKLEEASEPPAAPSHIEAKPAQKENVPMDMKAQDGPKSLETKTTNVSEASFPPPHVAAPIAKTTASSSTPSTAFLKESWGFNMKNSATSTSLLKRQQAYIAQYGLTGMTPVVL 229          
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Match: A0A0W8DVI9_PHYNI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVI9_PHYNI)

HSP 1 Score: 136 bits (342), Expect = 1.850e-33
Identity = 82/210 (39.05%), Postives = 114/210 (54.29%), Query Frame = 3
Query:   30 VARCFASLPEHIVVGMPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASAPEPVVEEKVAAAXXXXXXXXXXXXXXXXXXXXATAASVVEAPPAPVSSPGATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL 659
            V+R F+S P+H V+G+P+LSPTM  GN+  W  +EGD I+AGD+VCE+ETDKA VD++A DD ++AK L+  G ++IPVG P+ V VDE +SVAAFKDF+      E    A +AP    EEK                        A+A         P SS       VF+  WG G+  S ++  +  +Q+ Y+  +G T   P  L
Sbjct:   22 VSRSFSSYPDHEVIGLPSLSPTMETGNMSKWNMKEGDAISAGDIVCEIETDKAVVDYEATDDMYLAKILIPEGAENIPVGQPMMVVVDEEESVAAFKDFKL-----EDAPSAPAAPALSAEEKPPKKEDVPVDAKTHEPVVPQDFLAASA---------PTSS------AVFEEKWGLGIKKSAISTSLIKKQQAYIALYGITGMTPAAL 211          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig828.17284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR44_9PHAE6.330e-8075.11Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
D8LTQ3_ECTSI1.320e-7072.77Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
A0A836CM78_9STRA2.930e-4250.92Putative dihydrolipoyllysineresidue acetyltransfer... [more]
A0A7S2DWD0_9STRA2.300e-3753.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A485LRT4_9STRA1.190e-3640.79Aste57867_24277 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A4A4E2_9STRA7.820e-3640.83Lipoyl-binding domain-containing protein n=4 Tax=P... [more]
A0A7S2SBH8_9STRA3.540e-3451.17Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9WUM2_9STRA6.590e-3450.24Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A484DRZ7_BRELC1.130e-3337.91Lipoyl-binding domain-containing protein n=1 Tax=B... [more]
A0A0W8DVI9_PHYNI1.850e-3339.05Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig828contigL-elsbetiae_contig828:1446..5649 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.7
Seed ortholog evalue1.8e-59
Seed eggNOG ortholog2880.D8LTQ3
KEGG rclassRC00004,RC02742,RC02857
KEGG koko:K00627,ko:K13997
KEGG ReactionR00209,R02569
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204
EggNOG free text desc.dihydrolipoyllysine-residue acetyltransferase activity
EggNOG OGsCOG0508@1,KOG0557@2759
EC2.3.1.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons4
Model size1598
Cds size588
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig828.17284.1prot_L-elsbetiae_contig828.17284.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig828 1520..4713 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.206216-UTR-L-elsbetiae_contig828:1445..15191622816911.206216-UTR-L-elsbetiae_contig828:1445..1519Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 1446..1519 +
1691683906.1328168-UTR-L-elsbetiae_contig828:1445..15191691683906.1328168-UTR-L-elsbetiae_contig828:1445..1519Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 1446..1519 +
1622816911.264803-UTR-L-elsbetiae_contig828:4713..56491622816911.264803-UTR-L-elsbetiae_contig828:4713..5649Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 4714..5649 +
1691683906.1871483-UTR-L-elsbetiae_contig828:4713..56491691683906.1871483-UTR-L-elsbetiae_contig828:4713..5649Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig828 4714..5649 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.2176244-CDS-L-elsbetiae_contig828:1519..15261622816911.2176244-CDS-L-elsbetiae_contig828:1519..1526Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 1520..1526 +
1691683906.1443-CDS-L-elsbetiae_contig828:1519..15261691683906.1443-CDS-L-elsbetiae_contig828:1519..1526Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 1520..1526 +
1622816911.2281313-CDS-L-elsbetiae_contig828:2713..28201622816911.2281313-CDS-L-elsbetiae_contig828:2713..2820Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 2714..2820 +
1691683906.1536076-CDS-L-elsbetiae_contig828:2713..28201691683906.1536076-CDS-L-elsbetiae_contig828:2713..2820Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 2714..2820 +
1622816911.2400186-CDS-L-elsbetiae_contig828:3926..43301622816911.2400186-CDS-L-elsbetiae_contig828:3926..4330Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 3927..4330 +
1691683906.1637135-CDS-L-elsbetiae_contig828:3926..43301691683906.1637135-CDS-L-elsbetiae_contig828:3926..4330Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 3927..4330 +
1622816911.2534053-CDS-L-elsbetiae_contig828:4643..47131622816911.2534053-CDS-L-elsbetiae_contig828:4643..4713Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 4644..4713 +
1691683906.178131-CDS-L-elsbetiae_contig828:4643..47131691683906.178131-CDS-L-elsbetiae_contig828:4643..4713Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig828 4644..4713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig828.17284.1

>prot_L-elsbetiae_contig828.17284.1 ID=prot_L-elsbetiae_contig828.17284.1|Name=mRNA_L-elsbetiae_contig828.17284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
MPALSPTMTHGNIGTWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFM
AKHLVEAGTQDIPVGTPIFVTVDEADSVAAFKDFQAQAVVEEGEVEAASA
PEPVVEEKVAAAAPAATPSPPPAAAPAPPAPAATAASVVEAPPAPVSSPG
ATVGLVFKRDWGSGVHGSPLTHRMSAEQKKYVERFGSTLQQPLDL*
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mRNA from alignment at L-elsbetiae_contig828:1446..5649+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig828.17284.1 ID=mRNA_L-elsbetiae_contig828.17284.1|Name=mRNA_L-elsbetiae_contig828.17284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4204bp|location=Sequence derived from alignment at L-elsbetiae_contig828:1446..5649+ (Laminarionema elsbetiae ELsaHSoW15)
ACGGGCGGAGCATTGAACTAGGCGTTGGTGTCGCGAGATGTTTCGCTTCG CTTCCGGAGCATATCGTCGTGGGAATGCCAGGCAAGTGCCTCGGCCTGTC GGGAGAATGCTGCCCCCGTCACGCTGTCGGCGAATCCGGAAAACTCGGAT TCGCAACACCTCGTGTTGTAGTTTCTCATGATCGACCGTATTCATGGCGC GTTGAGATGCCTAGCCCGCCTACTCTCGTCGAAATCGGTGGTATTGTTCG AGTACGTCGCGGTTCGGTGTGCCTCGGCAGTTAGACTTTACTTTGCAGGA ACTTCCAACACCACGGGCAACTTACAACTTACGAGCCCACCCTTTGGTCG AGCCTGGATTGAAGAGTATTTGGTCCTTTGTGGGCCTTGCCTGCGAAAGC TGGGAACGATGGCACACGGTGCACTCGCAGAAGCAATTGCTTGGACAAAA GCTGCTGTTGCACTACGAACCCTAACCCTTCCTGTCTACCTGTGCCTGCG TACGTGCCGAGACTTCGGGTGGCGTCTGTACATACATATATAGTAGATTC GTGACAAGCGGCGCGCTGACGTCGGCATGTGTGTGGGGTGTGACGAGCGT TTATCCCTTTGAATAGCTCAGTGATTTCAACCAGTGAACCCAAAAAACTA GGGTCGATCTCGCCGCTGGGGTCGGGGCGGTATTTATCAGATGTGTTGTT GCACCGCCATGAAATCAACGACAATCCCCGCCACCCACACGAACGGAAGC TAGCGTTTCACATTGATAAGTTGTTACACCACAACCACTCTTCTTTCCCC CAAGGAGTTGAACCCAGTAGTAAACCGCTACATATAGCATTCACGTGCGC TAAACCCGCAACCACAGCAGCAGTGCAAGATTGGTGCCCTGTGCGATGAC TCGAGATGAATGTCGAACAAGTTGACACAGATGTACACGTGTACTTGGTA CATCCGTAGACCGAGCGTGCTCTGTCTCTCTCCAGGAGCCACAGTGTTTG CTACTGCTGCTGGGCCTTCCACTGTTGTTACAAACGGGACGATTCGAATG GGTGTATCGCAGCTATTTATCGAGAGAGCGGTTTTGGTGTTCGTAGACAG AACTGCTGCCTCCCGGTCCCCGCCTCTCTCCTCTGAAAGACGTGAATATG CACCTGCCCATACTCTCGGCGGCGCTATGGCGCGACGCTTCGGCTCAGCT TACCTACGTCCTGCTTGCACTCGCCCCTCTGCGTGTCCCGGTTCGATGCT TGGCGCGAATCCCTGCAGCGCTTTCTCCGACGATGACACACGGGAACATC GGGACTTGGGGCAAGCAAGAAGGCGACGAGATCGCAGCGGGAGACGTGGT GTGCGAGGTGGAAACGGATAAGGCGGTGAGATGCTTCCCGCTAGGGACGC GCGTGATCGCTTCAAGCAACGCTCGCTTCGTATAGTGTTATCATCGTCGT CGTTGTTCGTTGAGGGTGGACCACGTACTTGAAGTTGCGGGGAAAATACT GGTTCTGAATTCTGAATTCTTCTTCGAAATCAGCGCGCTTAGGATATGTG TATGGTATCGCAAGGTCTAGGGAGGTCGGGATCCGTGTGACTGTCTTGGG CCCCATTTTATTGGAGGCAAGCATCCTGGCTATCTTTGCGTGTCTGCTGT GTTGGCTGGTTTGCAAGGCGTGTGTGTGTGTTTTTTCGATCAGCAAAACC CGATCAGGTTGACAGAAATTTGGGCGTTTTGAGACGGTTTGAGAACACGA AGTTCTCCAGACCGAAAGCTACTGTTGTTCCTCCAAGGATCTAACAAGAG GTGCTCAGCCAAAGACCCCGTCTCCAAAGACCCCGAGCGCTCCATGGCCA ACACTCGCTGCGGTCTACCCCAAGCGTGCACGCCCTCACTTTTGTGGACA CACGAAAATATAGTTTGCTCGATGCAGAATTGGACTCATTCAGTCGACCC CCCCCCCCCCGCATATTGACACCTGATCTGCTACCAACGATTCTAGCTAC CAAAAGATTGACTGATGTATTTTGGTATTGGTTCTTGTTTCAAAGCGCAG GTCGATGTTGCGGTGATAAATCGCAGCTGGAGAGAGATGTACGGCATTTT CTGTGGGAGGTAACAGAAAATCACCACTTGAAAACAAAAACTAGTGCCGG TTCGGGCTCTCTCCTCTGGAGAACCCCTGCATGACATTTCAAAGCTTGGA AACATGGTATTTCAGTACATCCTTAAAACGAACGGAGTTTTCCTGGCGAT TCAGTCTTTGTTGTGTTTACCAGGCCCGCGAGCGCCGTCCTTGCTCCTCC CGTTCCTCCTCCGTTCACTCGCGCTCTTCTTCAGCACCGTAACCCTACCC CGCAGAACGCACATTAGAGGTTGTCCCGAGTAAAGAAGTGTACGCAGTCG AACCGGCGAAGACGAGCGCGGGCGGCTTACCGAAAACACCCCCTGTCCGC TTGACGTTTGTTCAACACACCCCCCACCCAGACGGTGGACTTTGACGCCC AAGACGACTCGTTCATGGCGAAGCACCTCGTTGAGGCCGGGACGCAAGAC ATCCCGGTTGGGACCCCGATCTTCGTTACGGTAGACGAGGCCGACTCCGT CGCAGCGTTCAAAGACTTCCAGGCACAGGCAGTGGTGGAAGAGGGAGAGG TGGAAGCCGCGTCCGCGCCAGAGCCGGTCGTCGAGGAAAAGGTGGCGGCG GCGGCGCCGGCGGCGACGCCATCACCGCCCCCCGCAGCAGCGCCGGCACC TCCGGCGCCCGCGGCCACTGCCGCATCTGTTGTGGAGGCGCCTCCGGCGC CGGTGTCCTCGCCGGGAGCGACGGTGGGGCTTGTTTTCAAGAGAGACTGG GGGAGCGGGGTTCATGGCAGCCCGTTGACTCACCGGTAAGCCGTACCCCC TGCTGACGGCTGTACCGACGTTTCGGTTGCATTTATCGTAGCAGCCTTTT CGAACATTTGGTCATCATTGTCACTGGGCGAAATACATACATATGATATG TGCGGTGTGTGAGTAGCCCCGTGAGGAGAGATTAAATTATTAAATGCCGA AGTTGTATGGCTGGTCGGATGCCTTACCCTGCTTCCATCCCGCTCACGAT CGTTCATCATTCCCCGCTGCGGTATTTTCGTTCTGTTCGCTTTTCCACGG TGTCACGACTTCGCACGACGACGTGCTGGCCCCTGAACGCTGTCACAGGA TGTCAGCGGAGCAAAAGAAGTACGTCGAGCGATTCGGGTCAACTCTACAG CAGCCGTTGGATCTCTGAGACGCCACTCGTGTACGAGTGCACACGCTGGA GCTCATGGGGGTTGGAGGGGTCCATGAAGCCCGGCTCTTATAAAGTTTAG CCGCTCTACTACGTACTGTTGTCTAGTTTTTGTGCGGATCTAGTGTAGTA GCACATCACCCAGAGAGGATCTCGGGACTATGCGATAGCAACCTGAGTTA TACTGCTTTGGAAGGTACCACCCACCAGCGCCAGGATCGTGTTCTCGCGT TTAATTTTGTTCGAGCTGCCCCTGATGGTGGTGTGGCGTTGGATTGCCCG GGCGGTGTTTTCTGCACGAGCGCCTCGTTGAAGATCATGTTGTGTAGCTC TGCCTTGAGAATGTGTGCCGGTATTTAGGGGCTCTGGTATTAAACGGCGG AGAGAGTGCGGCGCCCGAGTTTCAGGGATCGAGGGCGCTAAATAGGTATG TGCTCTCCCTCCCGTATTCCAGTTTCGGATTTTTTTTTTCCTGATTGAAG ATATCTCACCCGGCGGCCGACCTCTCACCTTTGTTATGATTTTTCCACCC CTTGTTTTTTTGTTTGCCTGGAACCCGGTGGATGAGGGCGGCACGCCGTA TCTGTTTATGTGGCGGTTTCGTCGCATTTGGTTACCAGAGTCCCTATGGT GCATACCTGGGAGTTTTAGCATGCCTGGGTGTCGATTAAATGTGCCCCTC TCCTTGGCAGGGTTTCGTTTGACGAAGAGATTTGGCTGCTACAATACGAG ACCACCCGACCAGTGTTGATTCATCTATTTCACTGGACAATGACATCGAT CGCCTTTGACACCACATTTGTTGGCAACAATGACATGGCCCGAGATACAA ACCTCGTTATCCATGCTGAGCCGGATAAAACACACGGGCATCGCAACCAC GCATCATCTACTGTTTCGTGTAGATAGATGCCTTCAAAACTCTCTCCACC ACCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig828:1446..5649+

>mRNA_L-elsbetiae_contig828.17284.1 ID=mRNA_L-elsbetiae_contig828.17284.1|Name=mRNA_L-elsbetiae_contig828.17284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig828:1446..5649+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCAGATGCCAGCGCTTTCTCCGACGATGACACACGGGAACATCGGGA
CTTGGGGCAAGCAAGAAGGCGACGAGATCGCAGCGGGAGACGTGGTGTGC
GAGGTGGAAACGGATAAGGCGCGCTTTCTCCGACGATGACACACGGGAAC
ATCGGGACTTGGGGCAAGCAAGAAGGCGACGAGATCGCAGCGGGAGACGT
GGTGTGCGAGGTGGAAACGGATAAGGCGACGGTGGACTTTGACGCCCAAG
ACGACTCGTTCATGGCGAAGCACCTCGTTGAGGCCGGGACGCAAGACATC
CCGGTTGGGACCCCGATCTTCGTTACGGTAGACGAGGCCGACTCCGTCGC
AGCGTTCAAAGACTTCCAGGCACAGGCAGTGGTGGAAGAGGGAGAGGTGG
AAGCCGCGTCCGCGCCAGAGCCGGTCGTCGAGGAAAAGGTGGCGGCGGCG
GCGCCGGCGGCGACGCCATCACCGCCCCCCGCAGCAGCGCCGGCACCTCC
GGCGCCCGCGGCCACTGCCGCATCTGTTGTGGAGGCGCCTCCGGCGCCGG
TGTCCTCGCCGGGAGCGACGGTGGGGCTTGTTTTCAAGAGAGACTGGGGG
AGCGGGGTTCATGGCAGCCCGTTGACTCACCGACGGTGGACTTTGACGCC
CAAGACGACTCGTTCATGGCGAAGCACCTCGTTGAGGCCGGGACGCAAGA
CATCCCGGTTGGGACCCCGATCTTCGTTACGGTAGACGAGGCCGACTCCG
TCGCAGCGTTCAAAGACTTCCAGGCACAGGCAGTGGTGGAAGAGGGAGAG
GTGGAAGCCGCGTCCGCGCCAGAGCCGGTCGTCGAGGAAAAGGTGGCGGC
GGCGGCGCCGGCGGCGACGCCATCACCGCCCCCCGCAGCAGCGCCGGCAC
CTCCGGCGCCCGCGGCCACTGCCGCATCTGTTGTGGAGGCGCCTCCGGCG
CCGGTGTCCTCGCCGGGAGCGACGGTGGGGCTTGTTTTCAAGAGAGACTG
GGGGAGCGGGGTTCATGGCAGCCCGTTGACTCACCGGATGTCAGCGGAGC
AAAAGAAGTACGTCGAGCGATTCGGGTCAACTCTACAGCAGCCGTTGGAT
CTCTGAGATGTCAGCGGAGCAAAAGAAGTACGTCGAGCGATTCGGGTCAA
CTCTACAGCAGCCGTTGGATCTCTGA
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