mRNA_L-elsbetiae_contig8259.17261.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8259.17261.1
Unique NamemRNA_L-elsbetiae_contig8259.17261.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A6H5K0Z4_9PHAE (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z4_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 1.010e-155
Identity = 265/331 (80.06%), Postives = 272/331 (82.18%), Query Frame = 2
Query:    2 ADLEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGSSATVATXXXXXXXXXXXXXXXXXX----FLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLLQEHDVFEA 982
             DLEDKILKKNIPGKYTWW+KDSDEEGE ARADWVDREASDPE EMTEMEKQKKWV+NDCPEPIRRTIMAR+EKERARTGVKGVLAD+DAWKLSADAED IAKEYRAAMLKRM EGHTVPG  A    XXXXXXXXXXXXXXXXXX    FLGSYRRRRLEQLKATAGRPQFGQI EAER+TFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEV                                           LAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIG+NFTQ+DVEWLLQEHDVFEA
Sbjct:    2 GDLEDKILKKNIPGKYTWWEKDSDEEGETARADWVDREASDPEREMTEMEKQKKWVDNDCPEPIRRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMAEGHTVPGPLAATTIXXXXXXXXXXXXXXXXXXXXEGFLGSYRRRRLEQLKATAGRPQFGQIVEAERSTFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEV-------------------------------------------LAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGENFTQDDVEWLLQEHDVFEA 289          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A835YKQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ5_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.080e-96
Identity = 173/335 (51.64%), Postives = 211/335 (62.99%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGSSAT-VATXXXXXXXXXXXXXXXXXXFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGD---YDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQEPEA 1000
            LED+ILK+NIPGKY+WW+KD+DE G  ARA+W D +ASDPE E+TE+EKQKKWVE DCP+P+RRTIMAR EKERARTGVKGVLAD+ A++ S  A+  + ++YRAA L+RM  GH V  S+   V                    FL  YR++RL +L+A+A RP FGQI EA R  FV  VD  DPR  VVVHLYEPYI AC+ MNR LEV                                           LA + P+VKFLR+ S    GGD   YDPVALPTL++YRA E+V C TRVTDD+GD FT+ DVEWLLQE ++FEA+   +A
Sbjct:    4 LEDQILKQNIPGKYSWWEKDTDEAGPKARAEWFDPDASDPEQELTELEKQKKWVEADCPDPVRRTIMARAEKERARTGVKGVLADHAAYQASEMADHQLQQQYRAAALQRMAGGHVVANSAPHFVPKTDPDAEDGDDDEDGDLNDFLSEYRKQRLLELQASAHRPIFGQIQEASRGDFVEQVDNVDPRCYVVVHLYEPYIKACQAMNRHLEV-------------------------------------------LAREYPSVKFLRMLSGDVSGGDEEGYDPVALPTLMVYRAKEIVACFTRVTDDLGDTFTKSDVEWLLQEINIFEAVAPQQA 295          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A7R9UGG9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.120e-50
Identity = 122/335 (36.42%), Postives = 163/335 (48.66%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETE-MTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGSSATVATXXXXXXXXXXXXXXXXXXFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAE---GGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQEPEA 1000
            LEDK+LKKNIPGKY+WWD + D  G          E  DP+ E   +++ Q+     D PEP+RR  M++  +E+  TGVKGVL D++ W+   DA++      R A L+R   G       A  A                   FL  YRR+R+ QL A A  P FG++AE     FV  VD  DPR  VVVHLYEP++  C +MNR LE+                                           LA +QP+VKFLR+R+       G ++D +ALPTLL+YR G+ V  + RV D++G+     DVEWLL    VF+A Q   A
Sbjct:    3 LEDKMLKKNIPGKYSWWDDEDDHRGXXXXG-----EVQDPDEEGKDDLDVQRAL--QDAPEPVRRACMSQRVREKDNTGVKGVLRDFEEWRDEEDAKETSDAMRRNAALQRAARG-------AIRAADGGAHANVENADIDSDDEFLERYRRQRMSQLMAAAAAPTFGEVAEVSGDDFVETVDAVDPRAFVVVHLYEPFVHLCTKMNRVLEI-------------------------------------------LARRQPSVKFLRMRADECRRTTGQEFDAIALPTLLVYRGGQTVATIVRVQDEVGEGLQANDVEWLLGLEGVFQASQNDSA 280          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A7S2B798_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B798_9STRA)

HSP 1 Score: 152 bits (383), Expect = 5.150e-37
Identity = 113/349 (32.38%), Postives = 161/349 (46.13%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEE--GEGARADWVDR--------EASDPETEMTEMEKQ----KKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGS--------SATVATXXXXXXXXXXXXXXXXXXFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQ 988
            LEDK+L+ NIPG+YT WDKD DEE  G+  RA+W+D          A  P  E   ME+     ++ +    PE + +T  A +    A+TG KGVL DY   K        + K +R A+L RM  G T   +         A VA                   FL  +R  R+ +L++ + +P FG I E     +  A+D  DPR  VVVH+YE Y+  C RMNR  E                  + +RS T                          VKF+RL+S+ +    +DPV LPT+ +Y+AG++     RV D +G NF+ +D+EW+L +  VFE+ Q
Sbjct:   14 LEDKMLRTNIPGRYTQWDKDDDEEEGGKNYRAEWIDPGEGADEAGAAGQPMNESQRMERDVADLQRKIAAGMPETVAKTSYAHQ--MGAKTGPKGVLNDYKEHKRIEAHNKQVDKLHREAVLNRMAYGATASNTLSLAQERIDAQVAQQEREAEEEADAAEEED--FLSKFREARIRELQSASTQPVFGNIVEVAAHEYCEAIDKCDPRVFVVVHIYEDYVKECGRMNRCFE------------------ELARSYT-------------------------NVKFVRLKSTESPS-PFDPVTLPTICVYKAGDLCNSFVRVQDTVGTNFSSDDIEWMLNQEGVFESKQ 314          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A7S2RCN5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCN5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.700e-31
Identity = 124/334 (37.13%), Postives = 165/334 (49.40%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEEGEGARA------DWVDREASDP----ETEMTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGSSATVATXXXXXXXXXXXXXXXXXXFLGSYRRRRLEQLKATAGRPQFGQIAEAERAT-FVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLLQEHDVF 976
            LEDKILK+NIPG+Y+ WD  +DE G   RA      D V+RE  D       EM ++ K +++ E+  PE + +   AR    R  TG KGVL DY   ++    E   A   R A+L+R+  G +     A    XXXXXXXXXXXXXX     L   R +R  +L+A A  P FG++ E      F+ A+D ED R  VVVH+Y+  + ACR MNR  E                                            LA     VKFLRL+++AA    +D   +P L +YR+G++  C  RVTD +G+ FT +DVE LL EH VF
Sbjct:   29 LEDKILKRNIPGRYSTWD--ADEAGTERRAAAREEEDTVEREEEDAGDGATQEMRDVGKMQEYAEHGVPETLSKNEYARAHGHR--TGPKGVLTDYREHQVHEHVERLAADAEREAVLRRIAYGAS--REDAEXXXXXXXXXXXXXXXXXAEQDILRRLREQRRRELQAAASMPVFGEVREVTADDHFLEAIDKEDSRVFVVVHIYDEAVPACRSMNRCFER-------------------------------------------LARSHSHVKFLRLQAAAAPT-TFDADVMPVLSIYRSGDMHACCVRVTDQVGERFTTDDVENLLSEHGVF 312          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A7S3GW90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW90_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.420e-27
Identity = 110/340 (32.35%), Postives = 157/340 (46.18%), Query Frame = 2
Query:    2 ADLEDKILKKNIPGKYTWWD---KDSDEEGEGARADWVDREASDPETEMTEMEKQKKWVEN-DCPEPIRRTIMAREEKERAR---TGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEG----HTVPGSSATVATXXXXXXXXXXXXXXXXXXFLGSYRRRRLEQLKA----------TAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLL 958
             DLE+ I ++N+PGKY+ WD   ++   +    + D V  E   P+    E+ +  + + N + PE IR++I+A    ERAR   TGVKGVLADY A +  A+AE      +R  +L RMT+G    +         A          XXXXXXX  F+  +R +RL++L+           T     FG + E     FV  V+ E     VVVHLYEP +  C R+N  L+                                            +AA QPT+KFLR+++S+ E    D VALP L +YR GE +  +  +  D G  FT+ D+EWLL
Sbjct:    2 GDLEETIFQRNVPGKYSKWDDVDRNEFHDEPTEKYDQVPAETERPKDSDMELLQYAQQLSNAEVPETIRQSILA----ERARMTATGVKGVLADYRAAQAMAEAEAQAIALHRQQVLTRMTQGAKVQYVAEEEEDETAGLDINDIDSDXXXXXXXDAFMREFRAKRLQELRGASSSSAGANYTEQTSMFGSVKEVRAEDFVQEVEGEKRNVVVVVHLYEPSVQTCIRLNVLLDE-------------------------------------------IAASQPTIKFLRMQASSNEIV-VDRVALPILTVYRGGETIETLAGIAADFGQYFTKADIEWLL 293          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A6U3QXS5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QXS5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.690e-19
Identity = 103/315 (32.70%), Postives = 147/315 (46.67%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTEMEKQKKWVENDCPEPIRRTIMA-----REEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGSSATVATXXXXXXXXXXXXXXXXXX--------FLGSYRRRRLEQLKATAGRPQF-GQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVT 910
            LED+ILK+NIPGKY+WWD  +D+E                   + E+E+ K+W     P+P++ + +          +   TG KGVL DY   +        +    R  +L+R TEG T+      ++  XXXXXXXXXXXXXXXXX        FL +YR+ RL QL+ T   P + G++ E     + S VDT DPR   +VHLYEP I  C ++N  LE C                              + LK  A             KF++LR+  A+  + D + LPT+++YR G +   + R T
Sbjct:    4 LEDRILKQNIPGKYSWWD--NDDEARPNXXXXXXXXXXXENNSLNEVEQVKQWDAQGVPKPLQISALEGGPVPHNGGKSQNTGAKGVLNDYRQTRAIESHNRQVEALERQDLLRRATEGATLQQGDVAMSAAXXXXXXXXXXXXXXXXXXXXXXXXEFLKNYRKNRLRQLQLTTHWPSYDGKVEEVTPEEYSSLVDTIDPRVHFIVHLYEPSIRDCVKLNSMLERC------------------------------ASLKKYA-------------KFVKLRALDAKP-NMDCIVLPTIMIYRGGNLEHNLVRFT 272          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: F0XWS7_AURAN (Phosducin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS7_AURAN)

HSP 1 Score: 96.3 bits (238), Expect = 8.780e-18
Identity = 106/342 (30.99%), Postives = 141/342 (41.23%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWV---DREASDPETEMTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHT----VPGSSATVATXXXXXXXXXXXXXXXXXX-------------FLGSYRRRRLEQLKATAGRPQFGQI-AEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGD----YDPVALPTLLLYRAGEVVGCMTRVTDDIGDNFTQEDVEWLL 958
            LEDK L+KNIPG+Y  WDKDSDEEG G RAD +   + E S+ +  + ++         D PEP+R          R   G KG+LA +  +K    AE     E R   L  +  G       P       T             XXXXX             FL  YR+ R+  L++  G P FG       +  ++ A+D  D RT VVVHLYEP    CRR+N+ L+V                                           LA ++  + F+ +R S  E GD    +D    P L++YRAG VV    +V  DIG  F   D+E LL
Sbjct:   32 LEDKFLRKNIPGRYEHWDKDSDEEG-GGRADSLGGSEDEESEDDDPIPDLP-----GPMDDPEPLR---YGEAPDARKMPGNKGILAQHRYFKKMQYAERVELAEERERKLLDVARGRLRDPDAPPXXXVQLTERQREAMAELREAXXXXXXXXXXXXXXXXXEFLEEYRKMRIAALRSVQGMPTFGAFKVNCSKEEYLQALDV-DARTLVVVHLYEPTFPKCRRVNQCLDV-------------------------------------------LAGRRREISFVGMRLS--EAGDACAGWDSEVFPVLVVYRAGSVVETFFQVGKDIGATFDYADIESLL 318          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A7S3PR85_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR85_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.710e-17
Identity = 94/335 (28.06%), Postives = 147/335 (43.88%), Query Frame = 2
Query:   20 ILKKNIPGKYTWWD----KDSDEEGEGARADWVDREASDPETEMTEMEKQKKWVENDCPEPIRR-TIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLK------RMTEGHTVPGSSATVATXXXXXXXXXXXXXXXXXXF--------LGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVG--CMTRVTDDIG-DNFTQEDVEWLL 958
            I+   +  KY   D    +DSDE+G G +  +V     D +   +  E+  K V+ D P P R  + +  ++++   TG KGV ADY+      +A+  I ++    +LK      R   G++  G+S + A+                           +   R+ RL+Q+K  A  PQ+G++ +  +  FV  VD  DPRT VVVHL+E YI+ACRRMN  L+                                            LA+K P +KF++L+++ A+       ALP  ++Y  G++V    +  V  +IG D FT  DVEWLL
Sbjct:    3 IISNELERKYLTQDLLQERDSDEDG-GEKTRYV----IDSDFSWSSEEENAKPVKEDAPHPDRDWSKLLTKQRKYGNTGPKGVKADYE------EAQRIIRRQNETKVLKDREEFRRQALGNSSSGTSLSYASQKKGISGSLVKSYDADDEIEIDDGEAIILKMRKMRLQQMKELAALPQWGRVLQVSKFQFVDEVDKADPRTPVVVHLFEDYINACRRMNDILDR-------------------------------------------LASKHPFIKFIKLKATDADQ-TLSHSALPAFMVYVNGQLVNEAGVNVVNTEIGNDLFTDTDVEWLL 282          
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Match: A0A7S3NFR8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFR8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.680e-16
Identity = 79/322 (24.53%), Postives = 133/322 (41.30%), Query Frame = 2
Query:    8 LEDKILKKNIPGKYTWWDKDSDEEGEGARADWVDREASDPETEMTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSADAEDAIAKEYRAAMLKRMTEGHTVPGSSATVATXXXXXXXXXXXXXXXXXXFLGSYRRRRLEQLKATAGRPQFGQIAEA-ERATFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVCMYXXXXXXXLSTTGIYQFSRSTTILPGWYPSDLKTLAASPKVLAAKQPTVKFLRLRSSAAEGG--DYDPVALPTLLLYRAGEVVGCMTRVTDDI--GDNFTQEDVEWLL 958
            LED +L +N+PG+ T W++D DE+          R   D E++  E  ++ K      P  +   +   +   R R G+KG L  Y  +K         A+  R A   R+  G        +                     F+ ++R RR+++LK  A RP+FG + +   +A +++A+D ED R   +VHL++  + + R +   L                                             LA+++  + FL +    AE    ++D   LP L+LYR+GEVV  + RVTD +  G++ T  D+E L+
Sbjct:    6 LEDMLLTQNVPGRMTTWERDPDEK--------CPRNNDDSESDTDENFEEAKNPNVSSPAQLPEAMRYGDAPGRQRAGIKGQLKQYRYFKRMEYLSKLAARAERDANCLRIANGAVRTEPFVSDPNIRQISNSDDDDDEFEDDEFMTAFRARRIDELKRNASRPRFGSMRQCVSKAQYIAAIDNEDSRVITIVHLFDTSLPSSRHLEALLVQ-------------------------------------------LASRRSDICFLSMTIEEAECSQHEFDNSVLPILVLYRSGEVVDTLFRVTDSLLQGNSNTDADLENLI 276          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8259.17261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Z4_9PHAE1.010e-15580.06Phosducin domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKQ5_9STRA2.080e-9651.64Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7R9UGG9_9STRA1.120e-5036.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B798_9STRA5.150e-3732.38Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RCN5_9STRA4.700e-3137.13Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3GW90_9STRA1.420e-2732.35Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6U3QXS5_9STRA3.690e-1932.70Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
F0XWS7_AURAN8.780e-1830.99Phosducin domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S3PR85_9STRA1.710e-1728.06Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3NFR8_9STRA7.680e-1624.53Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8259contigL-elsbetiae_contig8259:4876..8417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.3
Seed ortholog evalue1e-115
Seed eggNOG ortholog2880.D8LEJ7
Preferred namePDCL
KEGG koko:K08327,ko:K15690
Hectar predicted targeting categoryother localisation
GOsGO:0001750,GO:0003008,GO:0003674,GO:0004857,GO:0004859,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0006139,GO:0006457,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007600,GO:0007601,GO:0007602,GO:0008150,GO:0008152,GO:0008277,GO:0008589,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016043,GO:0018130,GO:0019438,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0032501,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042995,GO:0043005,GO:0043086,GO:0043226,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0045880,GO:0046116,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051606,GO:0051716,GO:0055086,GO:0055102,GO:0061083,GO:0061084,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098772,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902605,GO:1903332,GO:1903333
EggNOG free text desc.heterotrimeric G-protein complex assembly
EggNOG OGsKOG3171@1,KOG3171@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-21_004390.1
Exons4
Model size1954
Cds size975
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8259.17261.1prot_L-elsbetiae_contig8259.17261.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8259 5719..8281 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816909.1848495-UTR-L-elsbetiae_contig8259:4875..57181622816909.1848495-UTR-L-elsbetiae_contig8259:4875..5718Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8259 4876..5718 -
1691683904.534677-UTR-L-elsbetiae_contig8259:4875..57181691683904.534677-UTR-L-elsbetiae_contig8259:4875..5718Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8259 4876..5718 -
1622816909.242838-UTR-L-elsbetiae_contig8259:8281..84171622816909.242838-UTR-L-elsbetiae_contig8259:8281..8417Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8259 8282..8417 -
1691683904.634089-UTR-L-elsbetiae_contig8259:8281..84171691683904.634089-UTR-L-elsbetiae_contig8259:8281..8417Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8259 8282..8417 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816909.196395-CDS-L-elsbetiae_contig8259:5718..58501622816909.196395-CDS-L-elsbetiae_contig8259:5718..5850Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 5719..5850 -
1691683904.5466073-CDS-L-elsbetiae_contig8259:5718..58501691683904.5466073-CDS-L-elsbetiae_contig8259:5718..5850Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 5719..5850 -
1622816909.2078707-CDS-L-elsbetiae_contig8259:6569..68791622816909.2078707-CDS-L-elsbetiae_contig8259:6569..6879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 6570..6879 -
1691683904.5568078-CDS-L-elsbetiae_contig8259:6569..68791691683904.5568078-CDS-L-elsbetiae_contig8259:6569..6879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 6570..6879 -
1622816909.2181923-CDS-L-elsbetiae_contig8259:7453..78291622816909.2181923-CDS-L-elsbetiae_contig8259:7453..7829Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 7454..7829 -
1691683904.577603-CDS-L-elsbetiae_contig8259:7453..78291691683904.577603-CDS-L-elsbetiae_contig8259:7453..7829Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 7454..7829 -
1622816909.228585-CDS-L-elsbetiae_contig8259:8124..82811622816909.228585-CDS-L-elsbetiae_contig8259:8124..8281Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 8125..8281 -
1691683904.6198897-CDS-L-elsbetiae_contig8259:8124..82811691683904.6198897-CDS-L-elsbetiae_contig8259:8124..8281Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8259 8125..8281 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8259.17261.1

>prot_L-elsbetiae_contig8259.17261.1 ID=prot_L-elsbetiae_contig8259.17261.1|Name=mRNA_L-elsbetiae_contig8259.17261.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp
MTEMEKQKKWVENDCPEPIRRTIMAREEKERARTGVKGVLADYDAWKLSA
DAEDAIAKEYRAAMLKRMTEGHTVPGSSATVATATAANGDDSDDDDDGDE
GFLGSYRRRRLEQLKATAGRPQFGQIAEAERATFVSAVDTEDPRTSVVVH
LYEPYIDACRRMNRFLEVCMYVCMYVCMLSTTGIYQFSRSTTILPGWYPS
DLKTLAASPKVLAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEV
VGCMTRVTDDIGDNFTQEDVEWLLQEHDVFEAIQEPEAVAAGGGGAAGGA
HEMSTRRGRREDGLGDSDDDGDDS*
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mRNA from alignment at L-elsbetiae_contig8259:4876..8417-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8259.17261.1 ID=mRNA_L-elsbetiae_contig8259.17261.1|Name=mRNA_L-elsbetiae_contig8259.17261.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3542bp|location=Sequence derived from alignment at L-elsbetiae_contig8259:4876..8417- (Laminarionema elsbetiae ELsaHSoW15)
GGCAGATCTCGAGGACAAGATCCTCAAGAAGAACATCCCGGGCAAGTACA CATGGTGGGACAAGGACAGCGACGAGGAAGGGGAGGGGGCCCGGGCCGAC TGGGTGGACCGCGAGGCGAGCGACCCAGAGACGGAGATGACGGAGATGGA GAAGCAGAAGAAGTGGGTGGAGAACGACTGCCCCGAGCCCATCCGCCGGA CAATCATGGCGCGGGAGGAGAAGGAGAGGGCGAGGACGGGGGTGAAGGGA GTGCTGGCCGATTATGACGCCTGGAAACTGTCTGCAGATGCAGGTACACG TAGTAGTAACTTGCTGCTGTGGTCTGCCATGCAGACTGCGTGTGCGCCAA ACCAACCCGATCTCGTGAATTGATAGCACGCGGAATCATGCGGAAGCTCC AAAGCCACCTTTTGGGTGTGCATGGAATGCCGGAACCGCTTTTTTTCAGA GCGGTTCGAGGGGGGCCATGTTGACCGTTTGGCTGTTCGACACACATGGT CATGCCGCGAACGACCGCTCTCTGACCATCGCGATACACACCTGGTCCCC CCTCGCTCGCTCGCTCTCACATCCTCTCCCCGCCACAGAGGACGCTATCG CCAAGGAGTACCGAGCCGCAATGCTGAAACGCATGACGGAAGGCCACACC GTTCCTGGCTCCTCTGCCACCGTCGCTACCGCCACGGCCGCAAACGGCGA CGACAGCGACGACGACGACGACGGCGACGAAGGTTTTCTGGGGAGCTACC GCAGGCGGCGGTTGGAGCAGCTCAAGGCCACGGCGGGGCGGCCGCAGTTC GGACAGATCGCGGAGGCGGAGCGCGCTACGTTCGTTTCAGCGGTTGACAC GGAGGACCCCCGGACCAGCGTGGTCGTACACTTGTACGAGCCGTACATAG ACGCGTGCCGACGGATGAACAGATTCTTAGAGGTATGTATGTATGTATGT ATGTATGTATGTATGTATGTATTTATGCATGTATGTATGTATGCATATAT GTATGTATGATGTGGGCGTGGCGCGCAAGCTTGTGCGGACATGTGCGATT GGTTGGCTAGTGCCAGCACGCGGAAAATGATGGCCAACATGAATTGCGGG TGGAGAGTTGGTTTCGGTCGCAAAACCAGGTTCTTGTCGCGCAATGACAC TGCTATCTCCTGACGGGGTTGTGTTTGAGAGGGAAGCTTGGTGTTGACTA GTAGATATCATATCATGAACTGTTGTGCATGTGTCCTCTCTTCAGTTTGT GACAACTGATACGGCAGTACCGGTACTAGCAGCTTACCGCTTGGGGTGGT GGCTGTAGATGGCGTATGTTGCGAGTGTTTTGGTGTGGTAGCGATGCGTT TCTATGTGCGGGCAAGCCGACCAAATTACGCTGGCCGAGAGGGTGTCTTT GGTTCTCACGCGAAGAAGGCCGTGGGTTGTCTTTTTCCCATGTAATGGGT TTCAAGAGCTCGGAGGGGGGCAGGGATTTCCATCAACGCTGCTTGGTTTA TTGTCGCTTCGCGGGTCTTACACCCTCATTAGATCCAGGTTGTCAACGAC CGGCATATACCAATTTTCCCGCTCTACAACGATCCTCCCCGGGTGGTACC CTTCCGACCTCAAAACCCTTGCCGCCTCCCCCAAGGTTCTGGCAGCGAAA CAGCCCACTGTAAAGTTCTTGCGGCTGAGAAGCTCGGCGGCGGAGGGCGG CGACTACGACCCGGTGGCCCTGCCGACGCTGCTGCTGTACAGGGCAGGCG AGGTGGTCGGGTGCATGACTCGAGTCACGGACGATATCGGCGACAATTTC ACGCAGGAGGACGTGGAGTGGCTGCTGCAGGAGCACGACGTTTTCGAGGT TAGGCACGAAAGGCGGGGTTCTCTTCTGAAGCCCGATGATGGGTGCTCGT GTCTCGTTTTGGTTGGTAGTCGCAATGTTCTTCTCTCTGCTTTTCGGTTT TGGTGCGATCTGGTTGTCTCGCCCAATTGTTTCACAGTTTCCTTTTTTTT GTTCGCAATGGATAAAGTGGTATGGCGTCTGTGAGACGCTTGTGGGCTGA GCCATGTGGCACAAAAAAACACCTGTTGTGTCCGAGTCGCTTCACGGTTG ATTCTCTTGGTTATGTTTTGTTTTCGCGGATTTTTCGTTGTGTATTAGGC GTTCCAACTGCCTGTCTTTCTCTCCAGGCGGCGCAACTGCGTTTCTGAGT GCGTTGCGTGGTTTGTTCCGAGAGGTCTAGAGTGTTAGTCGTTCCGACGG CGGACCCCACCAACGCCCCTCCCCCCAATAGGCGTGGAAGAACCTCATCG CCTCAGTTTTTTGAAGCAGACACAGTAGTCCTGGAGTTCATGGGCAAAAG CGCTGACGCCGATTCGACGCGTTGGTACACTTATTGGTTCGAGTTACAGC CCTTGTCGGTTTTGGTGGTCGTGGGCTATGTAGTCACGCAAGTTTCCCGC TCGGTGCGAGCTTAAGTTATGAGAAACAGGGTACCTGAAGCGTCTTCAAT TTGTACTCCGAGGCGCTACATGTTCAAAGTGGTTCGCATGCCTGCGTGTC TCGTCTGTCACTCGCAGGCGATCCAGGAGCCAGAAGCCGTGGCAGCAGGC GGGGGCGGCGCTGCGGGAGGAGCCCATGAGATGTCCACGCGCCGAGGCCG AAGAGAGGACGGCTTAGGTGACAGCGATGACGACGGCGACGATAGCTAGG TTGACGGCTCTCTGTGGCCGTTGTTGTTGGCAGCTACAGTAGTAGTAAAT TTTGTTTGGGCCGCGGGCGCAAGCACATTAATATCTTGTTTTTCGAAGGC GTTCGGGAGAGTTTTTGTTGGTTTGCACACTGTGCGGTCCCAATTTCTCA GCCTGTACATATGCTGGGCGGATTGTGATGATTCGGAGGTTAATGCTGGG CTGGAGCTTGGAAACACGAAATGCTTGCCAGTTTGTTTGAAACGAAACAG TTTCAGGAAATGTCCACAGGTTGCTTGCTTCACCTCGCAACTGAAGCATT CTGTCAAATAGATCAGTTCTTGGCCACCCCGGCGTATGCATACTGTACGC AGCTCAATCCTCTCAAGGAGAAACGCGACCCAGGTTATTTGAAACGGAAT TTCAACGCGAGCGGCCTGAAAGTCGACTAGGATTGTAGTTCTTCTTAAAC GATGGGTCCCCTCTCCACATTTGTATGCACCTGGTATATACAATCCATCT TTATTTCATTGTTGAGGGCAAAACACTAACGGAAGATACAATCAGTACGC TATGTTAAGTACCCCAAATAAACTTTCCGAGTTCAAGCCACGCTGCTTTT GTACCAGGTAGTCGGGGGCGGTGGTTTTTGTATCTACATACATCAGTTGG ATGCCCGCTGAACGTGAAGTACCCGTTCCAGGGGATCGCCGGGGATGGTT CATCTGTCATGATGAACGGGCAGATACCCCCTCTCAGCAGAGTGCGCCCT GTCGGTAGCCGACGAAGGCAGCGAAGCCCCCCCCCCCCAACATTTTATTT CTCAGAGGTAATCTGCGTACCAAAATGCTGGAGAGAACGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8259:4876..8417-

>mRNA_L-elsbetiae_contig8259.17261.1 ID=mRNA_L-elsbetiae_contig8259.17261.1|Name=mRNA_L-elsbetiae_contig8259.17261.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig8259:4876..8417- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGAGATGGAGAAGCAGAAGAAGTGGGTGGAGAACGACTGCCCCGA
GCCCATCCGCCGGACAATCATGGCGCGGGAGGAGAAGGAGAGGGCGAGGA
CGGGGGTGAAGGGAGTGCTGGCCGATTATGACGCCTGGAAACTGTCTGCA
GATGCAGATGACGGAGATGGAGAAGCAGAAGAAGTGGGTGGAGAACGACT
GCCCCGAGCCCATCCGCCGGACAATCATGGCGCGGGAGGAGAAGGAGAGG
GCGAGGACGGGGGTGAAGGGAGTGCTGGCCGATTATGACGCCTGGAAACT
GTCTGCAGATGCAGAGGACGCTATCGCCAAGGAGTACCGAGCCGCAATGC
TGAAACGCATGACGGAAGGCCACACCGTTCCTGGCTCCTCTGCCACCGTC
GCTACCGCCACGGCCGCAAACGGCGACGACAGCGACGACGACGACGACGG
CGACGAAGGTTTTCTGGGGAGCTACCGCAGGCGGCGGTTGGAGCAGCTCA
AGGCCACGGCGGGGCGGCCGCAGTTCGGACAGATCGCGGAGGCGGAGCGC
GCTACGTTCGTTTCAGCGGTTGACACGGAGGACCCCCGGACCAGCGTGGT
CGTACACTTGTACGAGCCGTACATAGACGCGTGCCGACGGATGAACAGAT
TCTTAGAGGTATGTATGTATGTATGTATGTATGTATGTATAGGACGCTAT
CGCCAAGGAGTACCGAGCCGCAATGCTGAAACGCATGACGGAAGGCCACA
CCGTTCCTGGCTCCTCTGCCACCGTCGCTACCGCCACGGCCGCAAACGGC
GACGACAGCGACGACGACGACGACGGCGACGAAGGTTTTCTGGGGAGCTA
CCGCAGGCGGCGGTTGGAGCAGCTCAAGGCCACGGCGGGGCGGCCGCAGT
TCGGACAGATCGCGGAGGCGGAGCGCGCTACGTTCGTTTCAGCGGTTGAC
ACGGAGGACCCCCGGACCAGCGTGGTCGTACACTTGTACGAGCCGTACAT
AGACGCGTGCCGACGGATGAACAGATTCTTAGAGGTATGTATGTATGTAT
GTATGTATGTATGTATGTTGTCAACGACCGGCATATACCAATTTTCCCGC
TCTACAACGATCCTCCCCGGGTGGTACCCTTCCGACCTCAAAACCCTTGC
CGCCTCCCCCAAGGTTCTGGCAGCGAAACAGCCCACTGTAAAGTTCTTGC
GGCTGAGAAGCTCGGCGGCGGAGGGCGGCGACTACGACCCGGTGGCCCTG
CCGACGCTGCTGCTGTACAGGGCAGGCGAGGTGGTCGGGTGCATGACTCG
AGTCACGGACGATATCGGCGACAATTTCACGCAGGAGGACGTGGAGTGGC
TGCTGCAGGAGCACGACGTTTTCGAGGTTGTCAACGACCGGCATATACCA
ATTTTCCCGCTCTACAACGATCCTCCCCGGGTGGTACCCTTCCGACCTCA
AAACCCTTGCCGCCTCCCCCAAGGTTCTGGCAGCGAAACAGCCCACTGTA
AAGTTCTTGCGGCTGAGAAGCTCGGCGGCGGAGGGCGGCGACTACGACCC
GGTGGCCCTGCCGACGCTGCTGCTGTACAGGGCAGGCGAGGTGGTCGGGT
GCATGACTCGAGTCACGGACGATATCGGCGACAATTTCACGCAGGAGGAC
GTGGAGTGGCTGCTGCAGGAGCACGACGTTTTCGAGGCGATCCAGGAGCC
AGAAGCCGTGGCAGCAGGCGGGGGCGGCGCTGCGGGAGGAGCCCATGAGA
TGTCCACGCGCCGAGGCCGAAGAGAGGACGGCTTAGGTGACAGCGATGAC
GACGGCGACGATAGCTAGGCGATCCAGGAGCCAGAAGCCGTGGCAGCAGG
CGGGGGCGGCGCTGCGGGAGGAGCCCATGAGATGTCCACGCGCCGAGGCC
GAAGAGAGGACGGCTTAGGTGACAGCGATGACGACGGCGACGATAGCTAG
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