mRNA_L-elsbetiae_contig825.17254.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: D7FMY6_ECTSI (Mitochondrial proton/calcium exchanger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMY6_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 8.020e-155 Identity = 333/467 (71.31%), Postives = 368/467 (78.80%), Query Frame = 1 Query: 1 T*VMIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKRXXXXXXXXXXXXXXXXXXXXXXXXXLEEAGGASADYILSGATAETTEDKAVNKLVEKAAVEAAARTAQGDVSPQVEMQEGQQQFAAMPGVAAKKGKEPVITEAATVAPTAGGRVGDRLVDPKLERLNKTKKSSPG------KAELDE---PVSDAVRQISEKEQEEDAPEDGGNKLTIAELAALESLASPSSVEKEKAQLAMMKAALQESLGKRDETERISGETAD--DVDGAASDTGSRETEKADTVHVGAGEQTLSVDQ-EAQPAEKTFNAQENVEPPAITMASAEDGATPESERTAN--EDAKIEEPAVDKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKNSEQGPEHVFNQIYSARDTGEIP 1359 T VMIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKRXXXXXXXXXXXXXXXXXXXXXXXXX G AD + S ATAET ED+AV+KLVEKAAVEAAARTA GD PQVEMQEGQQ+F A GV AKKG EP+ TEA VAP+ G VG RLV K + N++KK+S K ELD+ V+DA RQ+S KE + DA EDGGNKLT AELAALESLASPSSVEKEKAQLAMMKAALQESLGK D TER + ET D D +GA+ ++G +EK DT GAG+QT D+ E PAEK +E E P++ MAS DGATP SE A+ EDAK EEPAVDKSVERVQ+KLASMLNR+ELEI VE+RIGDKMHVLDRDSDGMVSAEEIAHVVQHVLAT+ST EA+AIA+DMDTDSDGQISVAELIAWV+KNSEQ EHVF++IY RDT E P Sbjct: 128 TEVMIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGADGVSSKATAETAEDEAVDKLVEKAAVEAAARTAPGDALPQVEMQEGQQRFGAASGVEAKKGTEPITTEADLVAPSTGVGVGGRLVASKAAKSNQSKKASKTSAMNTPKVELDQRVGDVTDAERQVSSKEVK-DAAEDGGNKLTNAELAALESLASPSSVEKEKAQLAMMKAALQESLGKPDGTERKNVETGDASDAEGASKESGPPTSEKDDTTRGGAGQQTQPEDEHEMPPAEKPDTLKETTESPSVAMASG-DGATPGSEGAADVQEDAKAEEPAVDKSVERVQTKLASMLNRLELEIQSVEQRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATKSTAMEAKAIAEDMDTDSDGQISVAELIAWVRKNSEQDAEHVFDEIYQ-RDTKETP 591
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A6H5K350_9PHAE (Letm1 RBD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K350_9PHAE) HSP 1 Score: 204 bits (519), Expect = 3.000e-51 Identity = 184/326 (56.44%), Postives = 202/326 (61.96%), Query Frame = 1 Query: 1 T*VMIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKRXXXXXXXXXXXXXXXXXXXXXXXXXLEEAGGASADYILSGATA-----------------------------------------------------ETTEDKAVNKLVEKAAVEAAARTAQGDVSPQVEMQEGQQQFAAMPGVAAKKGKEPVITEAATVAPTAGGRVGDRLVDPKLERLNKTKKSSPG------KAELDEPV---SDAVRQISEKEQEEDAPEDGGNKLTI--------------------AELAALESLASPSSVEKEKAQLAMMKAALQESLGK 732 T VMIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKRXXXXXXXXXXXXXXXXXXXXXXXXX G AD + S ATA ET ED+AV++L+EKAAVEAAARTA GD SPQVEMQEGQQ+F A GV KKG EPV TEA +AP+ G VGDRLV K + ++KK+S K ELD+ V +DA RQ+SE ++E+ EDGGNKLT AELAALESLASPSSVEKEKAQLAMMKAALQESLGK Sbjct: 955 TEVMIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGADGVSSNATAVRCFVRSLGPVQVYVAALETSRPGMVVHASARLLNTFLSLVAMSPSMCASLVKETAEDEAVDRLIEKAAVEAAARTAPGDASPQVEMQEGQQRFGAPSGVETKKGTEPVTTEADLLAPSRGVGVGDRLVASKPAKSKQSKKASKTSAVNTPKVELDQRVGNVADAERQLSESKEEKHTAEDGGNKLTSYLPAHAGRDPCTRRPRLLKNAELAALESLASPSSVEKEKAQLAMMKAALQESLGK 1280
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A6H5K7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7F3_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.330e-42 Identity = 85/100 (85.00%), Postives = 92/100 (92.00%), Query Frame = 1 Query: 1054 MLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKNSEQGPEHVFNQIYSARDTGE 1353 MLNR+ELEI VE+RIGDKMHVLDRDSDGMVSAEEIAHVVQHVLAT+ST TEA+AIA+DMDTDSDGQISVAELIAWVKKNSEQ EHVF++IY RDT E Sbjct: 1 MLNRLELEIQSVEQRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATKSTATEAKAIAEDMDTDSDGQISVAELIAWVKKNSEQDAEHVFDEIYQ-RDTKE 99
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A7S2XKQ2_9STRA (Mitochondrial proton/calcium exchanger protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKQ2_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.010e-19 Identity = 82/232 (35.34%), Postives = 130/232 (56.03%), Query Frame = 1 Query: 619 LTIAELAALESLASPSSVEKEKAQLAMMKAALQESLGKRDETERISGETADDVDGAASDTGSRETEKADTVHVGAGEQTLSVDQEAQPAEKTFNAQENVEPPAITMASAEDGATPESERTANEDA-------KIEEPAVDKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKN 1293 L+ E+ A+ SL SP VE E+A+ +KAA+ + K +E + A S+ S+E E ++ V E S ++ A+K A T+A ++ A ESE + D ++E+ +++++ R+QSK+ +ML++IEL+IS+V +IGDK H+LD+D DG++S +E+A +Q VL E T EA AIA DMD + DG +VAEL+ WV+ N Sbjct: 598 LSFEEMQAIRSLLSPDPVESERAEYERIKAAM---MVKEEEEAQT----------APSEPPSQEDEAVESEEVPLAESRDSAPITSEEADKEA---------ANTIAEMDETAKSESEASTVTDIVPPEVVDEVEDEHLNRAIARLQSKVETMLDKIELQISDVHLKIGDKFHLLDKDMDGVMSMDEMAECLQSVLKRELTSEEAMAIAADMDENKDGLFTVAELLKWVETN 807
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: K0R337_THAOC (Mitochondrial proton/calcium exchanger protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R337_THAOC) HSP 1 Score: 99.8 bits (247), Expect = 3.210e-18 Identity = 86/286 (30.07%), Postives = 150/286 (52.45%), Query Frame = 1 Query: 523 GKAELDEPVSDAVRQISEKEQEEDAPEDGGNKLTIAELAALESLASPSSVEKEKAQLAMMKAALQESLGKRDETERISGETADDVDGAASDTGSRETEKADTVHVGAGEQTLSVDQEAQPAEKTFNAQENVEPPAITMASAEDGATPESERTANEDAKIEEPA--------VDKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAW-----VKKNSEQGPEHVFNQIYSAR 1341 G+AE+ E D V+ SE + E+D+ ++ +L+ E+ A+ LASP V+ E+ +L +K AL E++ ++ R + + + V A ++S+D+ +T AQ + + A+ ++ + +A+ D + PA + K+++R+ ++ M+ +IE ++++VE +IGDK H+LDRD DG+++ EE+A V+Q VL E T EA AIA+DMD D DG SVAEL W V K +E+G + + + + R Sbjct: 232 GRAEIAE---DTVK--SEDDGEDDSGDEDDVELSTDEIKAISQLASPDPVQAEREELKRIKEALSETVSSDEQXXXXXXXXXXXXXXI------RRQAEEEALEVSA---SISIDEPL----RTEEAQNEAAQALLEIEEAKKDSSRDPSESADGDTGQDSPATVAVGDVKLQKAIDRLSGRVEDMVGKIETQLTDVESKIGDKFHLLDRDGDGVLTMEEMAQVLQTVLKRELTSEEAMAIAEDMDQDKDGFFSVAELAQWCESESVVKLAEEGRDEDLDDLITER 499
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A7S4MVF0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVF0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.900e-18 Identity = 45/93 (48.39%), Postives = 72/93 (77.42%), Query Frame = 1 Query: 1015 DKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKN 1293 DK+ ER++S++ SM+ +IE+++S+V+ +IGDK+H+LD+D D ++S+EE+A +Q VL + T EA AIA++MDTD DG ++V EL+ WV N Sbjct: 57 DKAYERLKSRVESMVGKIEVQLSDVKAKIGDKLHILDKDRDDIISSEEMAQALQTVLKRKLTLEEAMAIAENMDTDKDGFVTVEELVKWVDAN 149
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A7S1ZWW1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWW1_TRICV) HSP 1 Score: 91.3 bits (225), Expect = 8.640e-17 Identity = 47/94 (50.00%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 1012 VDKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKN 1293 +DK+V+R++SK+ SM+ IE+ +++V +IGD++H LD+D D M+S EE+A V+Q VL E + EA AIA DMD + DG +VAELI WV+ N Sbjct: 151 LDKAVDRLKSKVESMVGNIEVRLADVGAKIGDRLHFLDKDMDDMISMEEMAQVLQQVLKRELSREEAMAIAADMDENKDGFYTVAELIRWVETN 244
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A7S2KBD3_9STRA (Mitochondrial proton/calcium exchanger protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBD3_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 8.830e-17 Identity = 94/270 (34.81%), Postives = 137/270 (50.74%), Query Frame = 1 Query: 571 SEKEQEEDAPEDGGNKLTIAELAALESLASPSSVEKEKAQLAMMKAALQESLGKRDETERISGETADDVDGAASDTGSRETEKADTVHVGAGEQTLSVDQEAQPAEKTFNAQENVEPPAITMASA-----EDGATPESERTANEDAKIEEPAVD----KSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKNS-----EQGPEHVFNQIYSA 1338 +EK +E D E+ +L+ EL A++ L SP S+ E+A+L +KAA+QE G D + E D + TG + +T+ + +D+ A K A E A T S ED E E TA +D + EE + K+V ++SK+ SML IE ++ E +IGD+MH+LD D DG+++ EE+A +Q VL T EA AIA DMD+D DG +VAEL WV N E+G E +++ A Sbjct: 292 NEKTEENDEEEEA--ELSPEELDAVKQLLSPDSLTSERAKLEKIKAAMQE--GSEDGKDETDAEIGDIIAADEQPTGVSPEQLDETMA------SADLDELAAKTIKDAEAMVKEEAEATTTFSTSYQHIEDKV--EEEATAAQDEEKEEGKAEXXLKKTVTSLKSKVESMLANIEAQMEETSIKIGDRMHLLDLDQDGILTKEEVATCLQAVLKRNLTFEEAMAIASDMDSDEDGIFTVAELNKWVDNNKLVKLVEEGREDDVDEVILA 549
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A7S0FM42_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FM42_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.620e-16 Identity = 47/115 (40.87%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 1012 VDKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKNS-----EQGPEHVFNQIYSAR 1341 +DK+V+R++ ++ SM+ R+E ++++VE +IGDK+H+LD+D D +S EE++ V+Q VL + + EA AIA DMD + DG ++VAEL WV N E+G E +++ R Sbjct: 32 LDKAVDRLKYRVESMVGRLEAQLTDVEAKIGDKLHLLDKDLDETISTEEMSDVIQQVLKRKLSAEEAEAIAADMDANKDGFLTVAELSKWVDNNKVIKLLEEGREGEIDKMIERR 146
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Match: A0A7R9WTH3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTH3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.010e-15 Identity = 91/285 (31.93%), Postives = 141/285 (49.47%), Query Frame = 1 Query: 568 ISEKEQEEDAPEDGGNKLTIAELAALESLASPSSVEKEKAQLAMMKAALQESLGKRDETERISGETADDVDGAASDTGSRETEKADTVHVGAGEQTLSV------------------DQEAQPAEKTFNAQENVEPPAI-------------------TMASAEDGATPESER---TANEDAKIEEP---AVDKSVERVQSKLASMLNRIELEISEVEKRIGDKMHVLDRDSDGMVSAEEIAHVVQHVLATESTETEARAIAKDMDTDSDGQISVAELIAWVKKN 1293 +S+K E D +D + L+ E+ AL L +P V KEKA L +K+A+Q+ D+ ++IS + A+ ++ A DT A V A E L D A A K A E + A T+A+ + P++E TA D ++EE VD V+R++ ++ SM+++IE+++S V+ +IGDK+H LD+D DG++S EE+A +Q VL E T EA IA +MD + DG +V ELI W++ N Sbjct: 2 VSDKVTESDQYDD--HDLSSQEMDALSQLLTPDPVSKEKADLERLKSAIQD-----DKQDKISSD-AEAIEEVADDT---TVPSATAERVDANEAELQXXXXXXXXXXSDQIADSQFDDTAVAAAKITEADEAAKAEAEASTTFTTDAHLRDASNAGDTLAAGDAQVVPQAEDDVDTALVDDEVEEEEDVVVDPVVDRLRQRIESMVDKIEVQLSAVKIKIGDKLHFLDKDMDGILSREEMADCLQQVLKREITLEEAMEIAAEMDENKDGLFTVGELIQWIETN 275 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig825.17254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig825.17254.1 >prot_L-elsbetiae_contig825.17254.1 ID=prot_L-elsbetiae_contig825.17254.1|Name=mRNA_L-elsbetiae_contig825.17254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=465bp MIEAASSEEQKTPEYRTRKLESLTRQNELIEEENRKREEAKQAQEEKKAEback to top mRNA from alignment at L-elsbetiae_contig825:25438..32118- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig825.17254.1 ID=mRNA_L-elsbetiae_contig825.17254.1|Name=mRNA_L-elsbetiae_contig825.17254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6681bp|location=Sequence derived from alignment at L-elsbetiae_contig825:25438..32118- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig825:25438..32118- >mRNA_L-elsbetiae_contig825.17254.1 ID=mRNA_L-elsbetiae_contig825.17254.1|Name=mRNA_L-elsbetiae_contig825.17254.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2790bp|location=Sequence derived from alignment at L-elsbetiae_contig825:25438..32118- (Laminarionema elsbetiae ELsaHSoW15)back to top |