mRNA_L-elsbetiae_contig824.17247.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.230e-40 Identity = 75/126 (59.52%), Postives = 92/126 (73.02%), Query Frame = 2 Query: 2 AAFSAPPDEDEHHLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRRGGVGT-SQGALWRP 376 AAFS P +DE HLVF+GL G TG+PL L ARAQFS + GR+AER VGPLQA +NGRVYG VQYPSM ELWP++Y + +R V+V++ VEVR + YL + K MYRR G+ +QGALWRP Sbjct: 228 AAFSVPRSDDEQHLVFIGL-GETGRPLPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPPGGSRNQGALWRP 352
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 134 bits (338), Expect = 4.150e-35 Identity = 72/128 (56.25%), Postives = 89/128 (69.53%), Query Frame = 2 Query: 2 AAFSAPPDEDEHHLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQA--ATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRRGGVGT-SQGALWRP 376 AA S P +DE +LVF+GL G TG+PL L ARAQFS + GR+AER VGPLQA +NGRVYG VQYPSM ELWP++Y + +R V+V++ VEVR YL + MYRR G+ +QGALWRP Sbjct: 310 AALSVPRSDDEQYLVFIGL-GETGRPLPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRRPSGGSRNQGALWRP 436
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 7.490e-21 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 32 EHHLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRR 337 E HLVF GL+G G L LT FS++ GR R GP+Q + RVY V+YP+M ELWP+IY V V+V++ + VR H+ +RY + KV YRR Sbjct: 35 EQHLVFTGLVG-AGPHLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGHKTIRYPGTELKVTYRR 135
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 4.970e-16 Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 38 HLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRR 337 HLVF GL TGQ L L A F V + + P+Q +NGR Y V YPSM+E+WP++Y+T +R VEV+L VE+R + +Y+ KV Y R Sbjct: 412 HLVFTGL-NNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLR 510
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: D7G8W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W7_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 8.020e-16 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 137 REVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRRG-GVGTSQGALWRP 376 RE GP NGRVYG VQ PSMK+LWP++Y+ VR V+V+L VE+R +L + KV+YRR G+S+GA WRP Sbjct: 85 REAGP-----NGRVYGGVQCPSMKDLWPEVYSAAAVRVVQVDLRVEIRSRSGDFLHLDSELKVIYRRPQDHGSSEGASWRP 160
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: A0A6H5L3B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B8_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 1.520e-13 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 2 Query: 32 EHHLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNL 265 E HLVF GL+G G L LT FS++ GR R GP+Q + RVY V++P+M ELWP+IY V V+V L Sbjct: 44 EQHLVFTGLVG-AGPDLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKFPTMNELWPEIYQNVAVEVVQVRL 120
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI) HSP 1 Score: 63.2 bits (152), Expect = 9.980e-10 Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 2 Query: 38 HLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLH-RKVRYLQVDFKV 325 H+VF GL P G L F V + P+Q A +GR Y V YPS++E+WP++Y T VRAVEV++ VEV R+ RY+ KV Sbjct: 84 HVVFTGLNDTGHDPRG-LRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 2.530e-9 Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 2 Query: 38 HLVFLGLLGGTGQPLGMLTARAQFSVSGGRRAEREVGPLQAATNGRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLH-RKVRYLQVDFKVMYRR 337 H+VF GL P G L F V + P+Q A +GR Y V YPS++++WP++Y T VRAVEV++ VE+ R+ RY+ KV Y R Sbjct: 262 HVVFTGLHNTGHDPRG-LRVTVIFGVDAVHQIACVTSPVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTR 361
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI) HSP 1 Score: 58.2 bits (139), Expect = 2.840e-7 Identity = 35/106 (33.02%), Postives = 48/106 (45.28%), Query Frame = 2 Query: 92 TARAQFSVSGGRRAEREVG-PLQAATN-----------------GRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRRGGVGTS 355 T A+FSV R ER PL A GRV V++PS+ E+WP++Y +R +EV++ VEVR + Y K+ YRR TS Sbjct: 524 TVCARFSVDPASRVERFASLPLDGAAGXXXXXXXDPAGAVGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSDGNILYTGPTLKITYRRSAARTS 629
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Match: A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE) HSP 1 Score: 53.9 bits (128), Expect = 8.560e-6 Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 2 Query: 89 LTARAQFSVSG-GRRAEREVGPLQAATN---GRVYGTVQYPSMKELWPDIYTTPGVRAVEVNLCVEVRPLHRKVRYLQVDFKVMYRRGGVGTS 355 L AQFSV G L+A N G T+ YPSM+++WP++Y+ V+ VEV++ V+VR K + KVMYRR T+ Sbjct: 487 LAVTAQFSVGPPGNLVGTAPTNLEADRNACAGSSSCTITYPSMEDIWPEVYSARSVKVVEVDMTVDVRSSDGKWVHSWPSVKVMYRRARTATT 579 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig824.17247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig824.17247.1 >prot_L-elsbetiae_contig824.17247.1 ID=prot_L-elsbetiae_contig824.17247.1|Name=mRNA_L-elsbetiae_contig824.17247.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp GGVLRPPRRGRAPPGVPGAAGRDGPAAGDAYRQGAVLGVGGAEGGEGGRPback to top mRNA from alignment at L-elsbetiae_contig824:27573..29757+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig824.17247.1 ID=mRNA_L-elsbetiae_contig824.17247.1|Name=mRNA_L-elsbetiae_contig824.17247.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2185bp|location=Sequence derived from alignment at L-elsbetiae_contig824:27573..29757+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig824:27573..29757+ >mRNA_L-elsbetiae_contig824.17247.1 ID=mRNA_L-elsbetiae_contig824.17247.1|Name=mRNA_L-elsbetiae_contig824.17247.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig824:27573..29757+ (Laminarionema elsbetiae ELsaHSoW15)back to top |