mRNA_L-elsbetiae_contig824.17244.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig824.17244.1
Unique NamemRNA_L-elsbetiae_contig824.17244.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: D7FSS5_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS5_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 9.440e-156
Identity = 222/303 (73.27%), Postives = 247/303 (81.52%), Query Frame = 1
Query:    1 AGTYYYVRKAVVILFPAYVLCCMFEVLDPPRPMMENAWDALVHRLGDGPRVFSAAELKAKGAGSRPMLSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPRKVAPKAVHGAAIRQEG-----------ADAAKQPGPAGGEDG-AEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCVTKPPEAP 873
            +GTYYYVRKAVVILFPAY+LCCMF VL+PPRPM E+ WDA +  LG GPRVFSAAELKAKG+GSRPMLSILGEVFDVS GAKHYGKGGAYE F GKDASRSFVSG+FTEAGLTDDLSGLEPS CLGIKDW +FY+N  +YKKRG+LAGRFYDA GK TRELA F KC R+G KEK+REAAE+ LYP CNSRW+A EGG+VWCED KKVPRK AP+ VHGA IR++G             AA+  G   G  G AE   DA +VKGRC C+D+DYA ANE RLLSYGGCA +SNSC+TKPPEAP
Sbjct:   46 SGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRVFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSKCLGIKDWHEFYQNHEQYKKRGLLAGRFYDANGKPTRELAPFHKCPRKGTKEKEREAAEKLLYPSCNSRWSAPEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGSSQPKSGATTQAAEAAGGGSGLSGEAEASTDAAKVKGRCSCFDVDYAKANEHRLLSYGGCAPESNSCMTKPPEAP 348          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A6H5LMN7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMN7_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 2.950e-128
Identity = 192/263 (73.00%), Postives = 215/263 (81.75%), Query Frame = 1
Query:    1 AGTYYYVRKAVVILFPAYVLCCMFEVLDPPRPMMENAWDALVHRLGDGPRVFSAAELKAKGAGSRPMLSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPRKVAPKAVHGAAIRQEG-------ADAAKQPGPA-GGEDG----AEPVRDALEV 753
            +GTYYYVRKAVVILFPAY+LCCMF VL+PPRPM E+ WDA +  LG GPR+FSAAELKAKG+GSRPMLSILGEVFDVS GAKHYGKGGAYE F GKDASRSFVSG+FTEAGLTDDLSGLEPS CLGIKDW +FY++   YKKRG+LAGRFYDA G+ TRELA F KCAR+G KEK+REAAE+ LYP CNSRW+AAEGG+VWCED KKVPRK AP+ VHGA IR++G       +  AKQ   A GG  G    AE  RDA +V
Sbjct:   46 SGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRIFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSECLGIKDWHEFYQSHELYKKRGLLAGRFYDANGEPTRELAAFHKCARKGAKEKEREAAEKLLYPSCNSRWSAAEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGKSQPESGVAKQAAEAAGGGSGVGGEAEASRDAAKV 308          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A1Y1I9L4_KLENI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9L4_KLENI)

HSP 1 Score: 159 bits (402), Expect = 1.220e-43
Identity = 82/151 (54.30%), Postives = 100/151 (66.23%), Query Frame = 1
Query:  181 GAGSRPML-SILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPR 630
            GA  +P+L +ILG VFDV+ GA HYG GG Y  FAG+DAS +FV+GDF+ AGLTDD+SGL PS   G+  WR FY    +YK+ G+LAGR+YD RG+AT  L   E    E   E  R   E K YP CNSRW+ A GG+VWC+  K  PR
Sbjct:   82 GADDKPILIAILGTVFDVTKGADHYGPGGGYSHFAGRDASAAFVTGDFSPAGLTDDVSGLAPSQVAGVAQWRQFYVE--RYKQVGVLAGRYYDDRGEATAALRSVEAALEEAAHEDARRKEEEKQYPACNSRWSQAAGGEVWCD--KGFPR 228          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A672FEF3_SALFA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FEF3_SALFA)

HSP 1 Score: 154 bits (390), Expect = 4.420e-42
Identity = 90/230 (39.13%), Postives = 119/230 (51.74%), Query Frame = 1
Query:  187 GSRPM-LSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCE--------DPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSC 849
            GSR + L++LG+VFDV+ G KHYG GGAY   AG+DAS SF++GDF+E GLTDD+SGL P   + + DW  FY+ E  Y+  G++ GRFY   G+ T  L   E    EG++ K R  AE+  YP CNS W++A+GG+VWC         D   VPRK      HG                                  RC C +  YA   +  L  Y GC+  ++SC
Sbjct:   53 GSRGLYLALLGQVFDVNKGHKHYGPGGAYHFMAGRDASCSFITGDFSEGGLTDDVSGLSPVQVVALYDWLAFYQRE--YQTVGVVIGRFYSTSGQPTEALLRVEASRAEGQRIKARAEAEKMRYPACNSEWSSAKGGRVWCSTKSGGVVRDWTGVPRKRFSARSHGV---------------------------------RCVCVEDPYAAEEDPNLQRYDGCSPHADSC 247          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A3S2PX90_ORYJA (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Oryzias TaxID=8089 RepID=A0A3S2PX90_ORYJA)

HSP 1 Score: 154 bits (389), Expect = 5.900e-42
Identity = 91/225 (40.44%), Postives = 116/225 (51.56%), Query Frame = 1
Query:  181 GAGSRPM-LSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCV 852
            GAGSR + L+ILG+VFDV  G KHYG GGAY   AGKDAS +F++GDFTE GLTDD+S L P   + + DW  FY  E  YK  G + GRFYD  G+ T+ L        EG++ K +  AER  YP CNS W+ + GG+VWC                G  IR+      K   P  G  G            RC C +  ++   +  L  Y GC   ++SC 
Sbjct:   48 GAGSRGLYLAILGQVFDVHKGYKHYGPGGAYHFMAGKDASLAFITGDFTENGLTDDVSSLSPLQVVALYDWLAFYHKE--YKTVGTVTGRFYDESGEPTKALLQVRAALEEGQRIKAQSEAERARYPACNSEWSPSRGGRVWCSSKS------------GGVIREWAGVPRKLFSP--GSSGV-----------RCVCVEDPFSAEEDPTLQEYDGCPPHADSCT 245          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A3P9MHI7_ORYLA (Cytochrome b5 domain containing 2 n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9MHI7_ORYLA)

HSP 1 Score: 152 bits (384), Expect = 3.180e-41
Identity = 93/225 (41.33%), Postives = 118/225 (52.44%), Query Frame = 1
Query:  181 GAGSRPM-LSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCV 852
            GAGSR + L ILG+VFDV  G KHYG GGAY   AGKDAS +F++GDF+E GLTDD+S L P   + + DW  FY  E  YK  G + GRFYD  GK T+ L        EG++ K +  AE+  YP CNS W+AA GG+VWC                G  IR+      K+  P  G  G            RC C +  ++ A +  L  Y GC   ++SC 
Sbjct:   48 GAGSRGLYLVILGQVFDVHKGYKHYGPGGAYHFMAGKDASLAFITGDFSEKGLTDDVSSLSPLQVVALYDWLAFYHKE--YKTVGTVTGRFYDESGKPTKALLQVRASLAEGQRIKAQSEAEKAHYPACNSEWSAARGGRVWCSTKS------------GGVIREWAGVPRKRFSP--GSSGV-----------RCVCVEDPFS-AEDPSLQEYDGCPPHADSCT 244          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A6J2WWN4_CHACN (neuferricin n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WWN4_CHACN)

HSP 1 Score: 152 bits (383), Expect = 6.370e-41
Identity = 85/193 (44.04%), Postives = 111/193 (57.51%), Query Frame = 1
Query:   31 VVILFPAYVLCCMFEVLDPPRPM-MENAWDALVHRLGDGPRVFSAAELKAKGAGSRPMLSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWC 606
            V +L   Y    ++  L   RPM  ++A DA    L          E  +KG      L+ILG+VFDV  G KHYG GG Y  F+G+DASR+FV+GDFTEAGLTDDL+ L PS  + + DW  FY+ +  Y   G L GRFY+  G+ +  L   E    EG K K +  A+ +LYP CNS W++A GG+VWC
Sbjct:   13 VAVLTVPYEWLTLYGALSLFRPMEQQSASDAPARLLTQTELALYNGEENSKGL----YLAILGQVFDVEKGRKHYGPGGGYRFFSGRDASRAFVTGDFTEAGLTDDLTDLSPSQIVALYDWLAFYQRD--YTPAGRLIGRFYNEAGQPSETLKQVESLLSEGLKLKAQTEAQNQLYPACNSEWSSANGGRVWC 199          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: H2M7U7_ORYLA (Neuferricin n=3 Tax=Oryzias TaxID=8089 RepID=H2M7U7_ORYLA)

HSP 1 Score: 151 bits (381), Expect = 1.020e-40
Identity = 92/225 (40.89%), Postives = 118/225 (52.44%), Query Frame = 1
Query:  181 GAGSRPM-LSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCV 852
            GAGSR + L+ILG+VFDV  G KHYG GGAY   AGKD S +F++GDF+E GLTDD+S L P   + + DW  FY  E  YK  G + GRFYD  GK T  L        EG++ K +  AE+  YP CNS W+AA GG+VWC                G  IR+      K+  P  G +G            RC C +  ++ A +  L  Y GC   ++SC 
Sbjct:   53 GAGSRGLYLAILGQVFDVHKGYKHYGPGGAYHFMAGKDVSLAFITGDFSENGLTDDVSSLSPLQVVALYDWLAFYHKE--YKTVGTVTGRFYDESGKPTEALLQVRASLAEGQRIKAQSEAEKAHYPACNSEWSAARGGRVWCSTKS------------GGVIREWAGVPRKRFSP--GSNGV-----------RCVCVEDPFS-AEDPSLQEYDGCPPHADSCT 249          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A6P7PPP2_BETSP (neuferricin n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7PPP2_BETSP)

HSP 1 Score: 150 bits (379), Expect = 1.810e-40
Identity = 98/248 (39.52%), Postives = 121/248 (48.79%), Query Frame = 1
Query:  133 LGDGP---RVFSAAELK---AKGAGSRPMLSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCEDPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCVTK 858
             G GP   R+ S +EL     +   S   L+ILG VFDV  G KHYG  GAY   AGKDAS SFV+GDFTE GLTDD+S L P   L + DW  FYE+   Y+  G + GRFY   G+ T  L   E    EGE+ K +  AE   +P CNS W+AA GG+VWC                G  +R       K+  P     G+  VR        C C +   A  +   LL Y GC   ++SC  K
Sbjct:   27 FGTGPAPARLLSRSELSQYDGEDGSSGLYLAILGRVFDVHKGHKHYGPAGAYRSMAGKDASLSFVTGDFTEGGLTDDVSSLSPLQVLALYDWLAFYESH--YQFVGFVTGRFYSETGQPTPALLQVEASRAEGERMKSQSDAEMLRFPQCNSEWSAARGGRVWCSTKS------------GGVVRDWTGVPRKRFSP-----GSTSVR--------CVCVEDPAAAEDNPNLLKYEGCPPHADSCSVK 247          
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Match: A0A3Q2D8G3_CYPVA (Neuferricin n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2D8G3_CYPVA)

HSP 1 Score: 150 bits (379), Expect = 2.500e-40
Identity = 86/225 (38.22%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  202 LSILGEVFDVSNGAKHYGKGGAYEGFAGKDASRSFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRFYDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKVWCE--------DPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALEVKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCV 852
            L++LG+VFDV  G KHYG GGAY   AG DAS +F++GDFTE+GL DD+S L P     + DW DFY  +  Y   G++AGRFYD  G+ T  L + E    EG++ K +  AE+  +P CNS W++  GG+VWC         D K VPRK+                               PV   ++    C C     A A +  L  Y GCA D++SC+
Sbjct:   68 LALLGQVFDVQKGHKHYGPGGAYHSLAGTDASLAFITGDFTESGLIDDVSSLSPLQVGALYDWLDFYHRQ--YHHVGLVAGRFYDESGQPTEALLEVEALRAEGQRLKAQSEAEKVHFPACNSEWSSGRGGRVWCSTKSGGVIRDWKGVPRKL-----------------------------FSPVSGRVQ----CVCIRDPSAAAEDPNLQKYDGCASDADSCM 257          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig824.17244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSS5_ECTSI9.440e-15673.27Cytochrome b5 heme-binding domain-containing prote... [more]
A0A6H5LMN7_9PHAE2.950e-12873.00Cytochrome b5 heme-binding domain-containing prote... [more]
A0A1Y1I9L4_KLENI1.220e-4354.30Cytochrome b5 heme-binding domain-containing prote... [more]
A0A672FEF3_SALFA4.420e-4239.13Cytochrome b5 heme-binding domain-containing prote... [more]
A0A3S2PX90_ORYJA5.900e-4240.44Cytochrome b5 heme-binding domain-containing prote... [more]
A0A3P9MHI7_ORYLA3.180e-4141.33Cytochrome b5 domain containing 2 n=2 Tax=Oryzias ... [more]
A0A6J2WWN4_CHACN6.370e-4144.04neuferricin n=1 Tax=Chanos chanos TaxID=29144 RepI... [more]
H2M7U7_ORYLA1.020e-4040.89Neuferricin n=3 Tax=Oryzias TaxID=8089 RepID=H2M7U... [more]
A0A6P7PPP2_BETSP1.810e-4039.52neuferricin n=1 Tax=Betta splendens TaxID=158456 R... [more]
A0A3Q2D8G3_CYPVA2.500e-4038.22Neuferricin n=2 Tax=Cyprinodon TaxID=28741 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig824contigL-elsbetiae_contig824:11381..14747 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.7
Seed ortholog evalue2.1e-123
Seed eggNOG ortholog2880.D7FSS5
Preferred nameCYB5D2
KEGG rclassRC00109,RC00110,RC00158
KEGG koko:K00287
KEGG ReactionR00936,R00937,R00939,R00940,R02235,R02236,R11765
KEGG Pathwayko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523
KEGG ModuleM00126,M00840
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0007275,GO:0007399,GO:0008150,GO:0009987,GO:0010720,GO:0012505,GO:0016020,GO:0020037,GO:0022008,GO:0030154,GO:0032501,GO:0032502,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046906,GO:0048037,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065007,GO:0097159,GO:1901363,GO:2000026
EggNOG free text desc.heme binding
EggNOG OGsKOG1108@2759,KOG1110@1
EC1.5.1.3
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionCytochrome b5-like heme/steroid binding domain
Ec32 orthologEc-09_001470.1
Exons7
Model size900
Cds size900
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816907.5578446-CDS-L-elsbetiae_contig824:11380..114651622816907.5578446-CDS-L-elsbetiae_contig824:11380..11465Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 11381..11465 -
1691683903.3008678-CDS-L-elsbetiae_contig824:11380..114651691683903.3008678-CDS-L-elsbetiae_contig824:11380..11465Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 11381..11465 -
1622816907.5694184-CDS-L-elsbetiae_contig824:11869..119341622816907.5694184-CDS-L-elsbetiae_contig824:11869..11934Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 11870..11934 -
1691683903.3123295-CDS-L-elsbetiae_contig824:11869..119341691683903.3123295-CDS-L-elsbetiae_contig824:11869..11934Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 11870..11934 -
1622816907.5794582-CDS-L-elsbetiae_contig824:12341..125401622816907.5794582-CDS-L-elsbetiae_contig824:12341..12540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 12342..12540 -
1691683903.3207014-CDS-L-elsbetiae_contig824:12341..125401691683903.3207014-CDS-L-elsbetiae_contig824:12341..12540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 12342..12540 -
1622816907.5896082-CDS-L-elsbetiae_contig824:12824..129911622816907.5896082-CDS-L-elsbetiae_contig824:12824..12991Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 12825..12991 -
1691683903.328932-CDS-L-elsbetiae_contig824:12824..129911691683903.328932-CDS-L-elsbetiae_contig824:12824..12991Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 12825..12991 -
1622816907.599584-CDS-L-elsbetiae_contig824:13196..132531622816907.599584-CDS-L-elsbetiae_contig824:13196..13253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 13197..13253 -
1691683903.3392875-CDS-L-elsbetiae_contig824:13196..132531691683903.3392875-CDS-L-elsbetiae_contig824:13196..13253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 13197..13253 -
1622816907.6107035-CDS-L-elsbetiae_contig824:13981..141021622816907.6107035-CDS-L-elsbetiae_contig824:13981..14102Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 13982..14102 -
1691683903.3481312-CDS-L-elsbetiae_contig824:13981..141021691683903.3481312-CDS-L-elsbetiae_contig824:13981..14102Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 13982..14102 -
1622816907.6205218-CDS-L-elsbetiae_contig824:14541..147471622816907.6205218-CDS-L-elsbetiae_contig824:14541..14747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 14542..14747 -
1691683903.3590584-CDS-L-elsbetiae_contig824:14541..147471691683903.3590584-CDS-L-elsbetiae_contig824:14541..14747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig824 14542..14747 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig824.17244.1prot_L-elsbetiae_contig824.17244.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig824 11381..14747 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig824.17244.1

>prot_L-elsbetiae_contig824.17244.1 ID=prot_L-elsbetiae_contig824.17244.1|Name=mRNA_L-elsbetiae_contig824.17244.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=300bp
AGTYYYVRKAVVILFPAYVLCCMFEVLDPPRPMMENAWDALVHRLGDGPR
VFSAAELKAKGAGSRPMLSILGEVFDVSNGAKHYGKGGAYEGFAGKDASR
SFVSGDFTEAGLTDDLSGLEPSLCLGIKDWRDFYENEPKYKKRGILAGRF
YDARGKATRELADFEKCAREGEKEKDREAAERKLYPLCNSRWAAAEGGKV
WCEDPKKVPRKVAPKAVHGAAIRQEGADAAKQPGPAGGEDGAEPVRDALE
VKGRCGCYDLDYAVANEKRLLSYGGCAQDSNSCVTKPPEAPKPRPKRKS*
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mRNA from alignment at L-elsbetiae_contig824:11381..14747-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig824.17244.1 ID=mRNA_L-elsbetiae_contig824.17244.1|Name=mRNA_L-elsbetiae_contig824.17244.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3367bp|location=Sequence derived from alignment at L-elsbetiae_contig824:11381..14747- (Laminarionema elsbetiae ELsaHSoW15)
GCAGGAACATACTATTACGTGCGGAAGGCTGTGGTCATCCTCTTCCCGGC TTACGTCCTGTGCTGCATGTTCGAGGTCCTGGACCCCCCGCGGCCCATGA TGGAGAACGCCTGGGACGCCTTGGTGCATAGGCTGGGCGACGGCCCGCGA GTGTTCTCGGCCGCCGAGCTGAAGGCCAAGGGGGCCGGATCGCGCCCGAT GCTGAGGTTTGTCGTGGTTGTGGTCGTGATCGCGGCCGCCGCCGCCGCCG TAGTTGTGCGTGCTCGCAAATATTGGTCATCTCCAGGCCTTGGCCGTGGC TACCCTCCATTGGAGGGCGTGATCTTCGCCAGAACCAAAAAACAGAAACA CAATTTGTCGACACACACCGATACACTCATGCGATAGACGACGCCGCCCG CCCACCGTGCGGGGCCGCCCCCCAGGTGTTGTCCGCCTCCCTCGAATCGA AACTCAAGTGCAGGTGGGTGGACGACCACAGCCTCTGAAGCTCACGCGTT TTTATTGTCACGGCCTGTCGCTCCGGCCGTCGGCCCGCCGAAAGTTGCCC ATGGAGTGCCGACAGCTCGCCTCCCCCCGCCGTGCCCCCCCTCTGGCTTG TTTTTCTGCCGCACGCGTTGCCTGCTACACACATGCGGTCACCAGCATCC TCGGAGAGGTGTTCGACGTGTCGAACGGGGCCAAGCACTACGGCAAGGGG GGCGCGTACGAGGGCTTCGCAGGCAAGGACGCCTCGCGCTCGTTCGTCAG CGGAGACTTCACAGAGGTGGGGGTAGAGACGGGCCACGAATACCATTCTT TTCTCGGCACATCAATATAGGAGTCTTTTCGTGGGGGTTTAGCTTTTTCC TGAGAGAACGATGTAGACATACGCCTTGGATGCGTTAAAGCACGTCGTTA TCTTCCTTTTTTTCAGGGATGCTCACGGGCCAGGACACGACCCGGCGGTA GTGTCAAGCGACTTTGAACTCTGACGGGTCGTGTCAGGTCGTGTCAAAAC GTTTGACGCGGTTGACGGGTCGTGCGTCGTGTCAATGACACGGTGTGAGA AAATCTGACGGGTCGTGTCGTGTCAGTGACACGCGATGGAAAAATACGAC GGGTGGGTCGTGTCGTGTCCATGACACGGTGTGGGGAAATTTGACGGGTC GTGTCGTGTCAATGACACGGAATGGAAAATCTGACGGGTCGGGTCGTTCC AGCTGACACGGCCACGACCTGACACGACCTGACACGACCCGCCCAGCTAA CCTGAAAACCCCTGCTTTTTTTTGGGCAGCATTGAGTTTCTTTCTCTGCG GCCCAAAGCTCGCGTTTGTATTTCCGCTCTTTCCAGCTGTCGCCTGTCGT GGATCACCACCACAAGTTGCGTTTTCAACAGCCGCACCTCCCTTGACTGT TTTCCGTTTGTTTGTTCCCCTTGTTCCCCATTTTTTTGTCGATTCTTCGG TGTCGGCGGCATTTATTGGTCGCCTGCTGTGCGCTGTGCGGCAGGCGGGG CTGACAGACGATCTGTCCGGGTTGGAGCCGTCTCTTTGCCTGGGCATCAA GGTCTGTAAACCACGGGAATGGAATGAGTCAACGAGCACAGGGTAACTAA CAGCATTACACTGTTGTTTTTCTCGTTGGTTGCCGATTCAGCTCACGCGC CGTTGTGGAGGGCCCATGGTATCCAGATTTCTACCCATGGCAAGAAAACG CGTGAGTACGCCCCCCCCGTCCCTTCTGCGTACGCCATCCCCGTCGGCAA TATCAGGACTGGCGTGACTTCTACGAGAATGAGCCAAAGTACAAGAAGCG GGGCATCCTCGCCGGCCGGTTCTACGACGCCAGAGGGAAAGCGACGAGGG AGCTGGCGGACTTCGAGAAGTGCGCACGAGAAGGCGAGAAGGAGAAGGAT CGCGAGGCGGCGGAGAGAAAACTGTGAGTTAAACGTTCGATGGAGAGAAG AGTATCGGAGAAAATAGCAAACTCTCTCCCCGCATGGGGCAGATTGAACG TTTCGCACAAGAGTTGACATGTTACAGCAGTGTTGCGGGCGGTGGTGATC GGTCTTCTGCGGCAGAGATATAAAAAATGGTCTGTGTAGCTCTTACGTAG CACTACCCCCAGCAATCCCCAGTCATGCCGCGAACTCCTCAACGCTTGGG ACCTGATCTCCCTGCGAACTCGATTGCACCACCTTTGCCCCCCTTGCCCC CGCACAGGTACCCCCTCTGCAACAGCAGGTGGGCCGCGGCGGAGGGAGGG AAAGTGTGGTGCGAGGACCCGAAGAAGGTTCCGAGAAAGGTCGCCCCGAA GGCCGTGCACGGTGCAGCCATCCGGCAAGAAGGCGCCGATGCCGCGAAAC AGCCAGGGCCGGCGGGCGGGGAAGATGGAGCTGAGCCCGTCCGAGACGCG TTAGAGGTGTGAGTTGCTTGCGTCCGCACAAATATAGCCGCAGGAGTGGC TATTTTGCTGCTGAATGTTTTTAATGTTTTTGCGGCAGCATTTCGCGCGC ACATGTGTGGATTTGTGTTGAAGCCGAAAGAAGCAAAGGCTCAGGTACTC GCAGCTTCCAATGGTTGCTTTCATTGAAGTATGGAAGGATTATGACCCAA ACCGTGCAACGTTGGAAAAGTTCTCTCTGCCCAATCTTGTTCGGCGTGCC CCAGGGCTCAAGTGATTTTGAAGAGAAAGTGCACTTTTCTTGGTTGAATA TCGCAAAAAAGGTTGCACTACATACTTCCTGTATTGTGGCCGCATCCATA TTCTCCCTTCGTTTCCTGGCGCGCCAGTTCAAGCTCGCCGGTTCCCTTCG CGACAAAATATAGGTAAAGGGGAGATGCGGCTGCTACGATCTTGACTACG CGGTAGCCAACGAGAAACGACTCCTGAGGTGAGGGGCCGGGGCAAGGCGC GGGAGGGAACGGTGCCAGCGCGAGGCTTCCACACCTCGATAGTCTGCACG GACCCAATTTATTCCTTCACATATCTAAGAAGCATGTACACAGATAGCGT GTAAGTTGTAGGTCAATACGCATTTAGAGGGAATGCGTTCTCACTTTTTG TGTGTTTGTGTGAGGGAAACCTGCGGCGTGCCTCTGTGTGTCAGCGTCCC GAAAAATCGCGTCCTGTCTGACCCACCCCTCTTTCCCCGGACAACGTGCG CGATTCACGCGCCGCGCCGCGCCGCGCGCTACCTCTCCTCTTCCTGGGCG TCCGTGAATCGTGCGTGCCCCTTTCTCCCTTCGCTCCTTTCCTTTCGTCT CGCCTTGTTTTCGCGGGTGGGTGTCGGGGCAGCTACGGCGGGTGCGCCCA AGACTCGAATTCGTGCGTGACCAAGCCTCCAGAGGCTCCCAAGCCGAGGC CGAAGCGAAAAAGCTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig824:11381..14747-

>mRNA_L-elsbetiae_contig824.17244.1 ID=mRNA_L-elsbetiae_contig824.17244.1|Name=mRNA_L-elsbetiae_contig824.17244.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1800bp|location=Sequence derived from alignment at L-elsbetiae_contig824:11381..14747- (Laminarionema elsbetiae ELsaHSoW15)
GCAGGAACATACTATTACGTGCGGAAGGCTGTGGTCATCCTCTTCCCGGC
TTACGTCCTGTGCTGCATGTTCGAGGTCCTGGACCCCCCGCGGCCCATGA
TGGAGAACGCCTGGGACGCCTTGGTGCATAGGCTGGGCGACGGCCCGCGA
GTGTTCTCGGCCGCCGAGCTGAAGGCCAAGGGGGCCGGATCGCGCCCGAT
GCTGAGGCAGGAACATACTATTACGTGCGGAAGGCTGTGGTCATCCTCTT
CCCGGCTTACGTCCTGTGCTGCATGTTCGAGGTCCTGGACCCCCCGCGGC
CCATGATGGAGAACGCCTGGGACGCCTTGGTGCATAGGCTGGGCGACGGC
CCGCGAGTGTTCTCGGCCGCCGAGCTGAAGGCCAAGGGGGCCGGATCGCG
CCCGATGCTGAGCATCCTCGGAGAGGTGTTCGACGTGTCGAACGGGGCCA
AGCACTACGGCAAGGGGGGCGCGTACGAGGGCTTCGCAGGCAAGGACGCC
TCGCGCTCGTTCGTCAGCGGAGACTTCACAGAGCATCCTCGGAGAGGTGT
TCGACGTGTCGAACGGGGCCAAGCACTACGGCAAGGGGGGCGCGTACGAG
GGCTTCGCAGGCAAGGACGCCTCGCGCTCGTTCGTCAGCGGAGACTTCAC
AGAGGCGGGGCTGACAGACGATCTGTCCGGGTTGGAGCCGTCTCTTTGCC
TGGGCATCAAGGCGGGGCTGACAGACGATCTGTCCGGGTTGGAGCCGTCT
CTTTGCCTGGGCATCAAGGACTGGCGTGACTTCTACGAGAATGAGCCAAA
GTACAAGAAGCGGGGCATCCTCGCCGGCCGGTTCTACGACGCCAGAGGGA
AAGCGACGAGGGAGCTGGCGGACTTCGAGAAGTGCGCACGAGAAGGCGAG
AAGGAGAAGGATCGCGAGGCGGCGGAGAGAAAACTGACTGGCGTGACTTC
TACGAGAATGAGCCAAAGTACAAGAAGCGGGGCATCCTCGCCGGCCGGTT
CTACGACGCCAGAGGGAAAGCGACGAGGGAGCTGGCGGACTTCGAGAAGT
GCGCACGAGAAGGCGAGAAGGAGAAGGATCGCGAGGCGGCGGAGAGAAAA
CTGTACCCCCTCTGCAACAGCAGGTGGGCCGCGGCGGAGGGAGGGAAAGT
GTGGTGCGAGGACCCGAAGAAGGTTCCGAGAAAGGTCGCCCCGAAGGCCG
TGCACGGTGCAGCCATCCGGCAAGAAGGCGCCGATGCCGCGAAACAGCCA
GGGCCGGCGGGCGGGGAAGATGGAGCTGAGCCCGTCCGAGACGCGTTAGA
GGTACCCCCTCTGCAACAGCAGGTGGGCCGCGGCGGAGGGAGGGAAAGTG
TGGTGCGAGGACCCGAAGAAGGTTCCGAGAAAGGTCGCCCCGAAGGCCGT
GCACGGTGCAGCCATCCGGCAAGAAGGCGCCGATGCCGCGAAACAGCCAG
GGCCGGCGGGCGGGGAAGATGGAGCTGAGCCCGTCCGAGACGCGTTAGAG
GTAAAGGGGAGATGCGGCTGCTACGATCTTGACTACGCGGTAGCCAACGA
GAAACGACTCCTGAGGTAAAGGGGAGATGCGGCTGCTACGATCTTGACTA
CGCGGTAGCCAACGAGAAACGACTCCTGAGCTACGGCGGGTGCGCCCAAG
ACTCGAATTCGTGCGTGACCAAGCCTCCAGAGGCTCCCAAGCCGAGGCCG
AAGCGAAAAAGCTAACTACGGCGGGTGCGCCCAAGACTCGAATTCGTGCG
TGACCAAGCCTCCAGAGGCTCCCAAGCCGAGGCCGAAGCGAAAAAGCTAA
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