mRNA_L-elsbetiae_contig8233.17238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 239 bits (610), Expect = 1.100e-70 Identity = 172/374 (45.99%), Postives = 219/374 (58.56%), Query Frame = 1 Query: 1 LISASMGCSRIVKILLDKGADTLVTGDEGVTALHMSAGKGHLDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NPDCRLPADGETALCAAAFEGHLAAVRVLLRGKADAMLSRADDQG-TSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGCCS--PKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNAP---RSAAASPTP----MALMLPILRRRASR 1086 +++ G SRI K+L+ KGA+ + G TALH + DA XXXXXXXXXXX NPDC+LP DG TAL AA EG +A +R LLRG A+ +L + G T+ VPLD+AA++GHT VV EL+Q+ IE C S G AL AA ++LDI+ IL+ AGVVDTG L +AAG G+ A VK LL+ + K+G AY+N A G PL+ + GC S P+I R+LVDAGADT+S +++ N G V FNDTPL + L K V G+ AT+E L RLEAI RLLL+V+AVHAVSWLWP+ AP R+ P P + LMLPIL+RR R Sbjct: 144 MMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLP-DGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVE-GAYLN-ARDVNGYTPLV--VCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKLMLPILKRRTKR 512
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 200 bits (509), Expect = 7.660e-57 Identity = 190/383 (49.61%), Postives = 238/383 (62.14%), Query Frame = 1 Query: 1 LISASMGCSRIVKILLDKGADTLVTGDEGVTALHMSAGKGHLDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPDCRLPADGETALCAAAFEGHLAAVRVLLRGKADAMLSRADDQGTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGCCS----PKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNA------PRSAA-------ASPTPMALMLPILRRRASRHHLV 1098 + +ASMG S ++ ILL KGA+ + D GVTALH+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN D R P DGET L A EG L A R LLR A+ +++RA + +PLD AARNG+ V+ EL+Q+ IE CGG S G AL +A + + + +L+ AGVVDTG L ++AG G A VK LLQ K + N G PL+ +I G P++ARLLV+AGADT++ +R TN+MG V F+ TPL L L KKV G ++++L RLE IRRLLLQVEAVHA SWLWP+++ P +AA A+ + +LPILRRRA R +V Sbjct: 39 IFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP--TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVNVRDRN-----GTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTY-ISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVV 413
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 195 bits (496), Expect = 8.170e-55 Identity = 136/293 (46.42%), Postives = 183/293 (62.46%), Query Frame = 1 Query: 280 ADGETALCAAAFEGHLAAVRVLLRGKADAMLSRADD-QGTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGCCSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTK-KVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNAP---RSAA-------ASPTPMALMLPILRRRASRHHLVVMPAVFRW 1122 +DG T L AA++G++ A R+LL KAD +L+ D G +F+PLD AA NGH VVNEL++Q I+ CGG SGGV+AL+ AAQ + L+I+ IL+ AGVVDTG+ L+VAAG G +K LL+ Q + R T AYVN G PL+ I P++ RLLV+AGADT+S + + N +G + TPL L + K KV G A+ EQL++LEAIRRLLL+VEAVHAVSWLWP++ R+AA A T + L + + RRRA R V + A+ R+ Sbjct: 146 SDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLE--QARARKTMDEAAYVNTR-DRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRA-RGRKVPLAALLRY 431
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 196 bits (497), Expect = 8.620e-55 Identity = 125/250 (50.00%), Postives = 160/250 (64.00%), Query Frame = 1 Query: 280 ADGETALCAAAFEGHLAAVRVLLRGKADAMLSRADDQGTS-FVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGCCSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDA---TEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNAP 1017 +DG T L AA+ G++ AV +LL KAD +L+ A D G F+PLD+AA+NGH VVNEL++Q I+ CGG SGG ALR AA LDI+ IL+ AGVVDTG+ L+VAAG G A +K LL+ Q +GR +T AY+N G G L+ I C P++ +LLV+AGADT+S + I N G F+ TPL L L GGR A T E+ N+LE IRRLLL+ EAVHAVSWLWP++ P Sbjct: 146 SDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLE--QARGRKSTDRAAYMNTLNGV-GLTSLLDGIQR---CRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLL------GGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTP 383
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE) HSP 1 Score: 177 bits (448), Expect = 9.840e-49 Identity = 121/291 (41.58%), Postives = 169/291 (58.08%), Query Frame = 1 Query: 292 TALCAAAFEGHLAAVRVLLRGKADAMLSRADD-QGTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGV-QALRLAAQMEYLDIVQILSIAGVVD-TGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGC--CSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPN---------NAPRSAAASPTPMALMLPILRRRASRHHLVVMPAVFRW 1122 T L AA +GHL AV+VLL KA+ +L+R+ + G SFVPL++AA+ G + VV EL+++ I CGGPSG + ALR+AA +DI+ I+ AGVVD G+ L+ A G G A V LL++QQ++ +++ YVN AC G L+ + G C+P+I R LVDAGADT+S++++ N TPL E +N EA RR+LLQ AVHAVSW+WP+ N+PR+ SPTP++ ML +LRRRA R + +FRW Sbjct: 14 TPLYIAAMQGHLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERWQTS-----YVNTACDDDGLTALLWSFGGNNNKPCNPRITRRLVDAGADTTSTVQLRAERSRTRVNMTPL--------------------EYVN--EATRRVLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKHSPTPLSTMLTVLRRRA-RTRASLWDTLFRW 276
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 177 bits (449), Expect = 4.040e-48 Identity = 113/255 (44.31%), Postives = 151/255 (59.22%), Query Frame = 1 Query: 391 GTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGCCSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNAPRSAAA--------SPT---PMALMLP-ILRRRASRHHLVVMPAVFR 1119 G +FVPLD+A ++GH+ VV EL Q + CGG SGGV++LRLA + +DI+ IL++ GVVDTG L+VAA VK LLQ Q G YVNN +G PL+ I G SP+IAR L+DA ADT S++ +T + + DTPL A L KVG ++ATEEQL L+AI RLL QV+AVHAVSWLW ++ R++ A PT P+ +P +LR + +VV+ AV+R Sbjct: 168 GATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAW------YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGR-KNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 177 bits (448), Expect = 4.620e-48 Identity = 113/266 (42.48%), Postives = 165/266 (62.03%), Query Frame = 1 Query: 346 LRGKADAMLS-RADDQGTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVD-TGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGC----CSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPN---------NAPRSAAASPTPMALMLPILRRRASRHHLV 1098 L KA+ +L+ ++ G SFVPL++AA+ G + VV+EL+++ I CGGPSGG+ ALR+AA +DI+ +L AGVVD G+ L+ A G G A V LL++Q+++ +++ YVN A G L+ + F G C+P+I R LVDAGADT+S++++ N TPL + + ++ G AT+EQL RLEA RR+LL+V AVHAVSW+WP+ N+PR+A SPT + +LP+LRRRA R L+ Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS-----YVNIARDDDGLTALLWS--FRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDW-ALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALL 395
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 173 bits (439), Expect = 2.120e-46 Identity = 115/260 (44.23%), Postives = 153/260 (58.85%), Query Frame = 1 Query: 349 RGKADAMLSRADDQGTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAI--GFAGCCSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNAPR--------------SAAASPTPMALMLPILRRRA 1080 R KA+ +L+R + +PLD AA+NG GVV EL+Q+ I CGG +GGV AL+LAA ++D++ L+ AGVVDTG+ L+ A G++ +VK LLQ+Q + + AYV+ G PLI I G CSPK+ RLLVDAGADT+S +R T G + TPL+LA L K + + +E L RLE IRRLLL+VEAVHA SWLW N PR S++ + + +LPILRRRA Sbjct: 168 RAKANPLLTRVN-LAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNG---TPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIK-IAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRA 422
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 169 bits (428), Expect = 7.260e-45 Identity = 115/278 (41.37%), Postives = 159/278 (57.19%), Query Frame = 1 Query: 340 VLLRGKADAMLSRADDQGTSFVPLDIAARNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAG-VVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAI--GFAGCCSPKIARLLVDAGADTSSSIRITN-TMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNNAP-------------RSAAASPTPMALMLPILRRRASRHHLVVMPAVFRW 1122 VLLR KA+ +L G S+VPL++AA +G+ V E+++Q I CGGPSGGV+ALR AA E+L+ + +L AG VVDTG L++AA G VK LL+R+Q AYVN YG P++ A+ G CSPKI RLLVDAGA+T+ ++ +T T + ++TPL L +V G AT+EQL RL+ R LL + EAVHAVSWLW + P ++ A TP+ M P+LRR+ V++ +FR+ Sbjct: 163 VLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADAD------AYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDG-EAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRG-VLLKTLFRY 432
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 165 bits (418), Expect = 2.170e-43 Identity = 96/196 (48.98%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 424 RNGHTGVVNELVQQRSIEACGGPSGGVQALRLAAQMEYLDIVQILSIAGVVDTGVVLMVAAGKGYLAIVKLLLQRQQKKGRSTTRIRAYVNNACGFYGAPPLIHAIGFAGCCSPKIARLLVDAGADTSSSIRITNTMGFVAFNDTPLTLAEAYLSTKKVGGGRDATEEQLNRLEAIRRLLLQVEAVHAVSWLWPNN 1011 ++GH+ VV EL+QQ + CGG S GV++LRLAA +Y+DI+ IL++ GVVDTG L+VAA VK LLQ Q G YVNN +G PL+ I G SP+IAR L+D GADT S++ +T + + DTPL A L KVGG ++ATEEQL L+AI RLL Q+EAVHAVSWLW ++ Sbjct: 189 QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW------YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGG-KNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSS 377 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8233.17238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8233.17238.1 >prot_L-elsbetiae_contig8233.17238.1 ID=prot_L-elsbetiae_contig8233.17238.1|Name=mRNA_L-elsbetiae_contig8233.17238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=369bp MGCSRIVKILLDKGADTLVTGDEGVTALHMSAGKGHLDATKMLVGAGAPIback to top mRNA from alignment at L-elsbetiae_contig8233:701..1861- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8233.17238.1 ID=mRNA_L-elsbetiae_contig8233.17238.1|Name=mRNA_L-elsbetiae_contig8233.17238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1161bp|location=Sequence derived from alignment at L-elsbetiae_contig8233:701..1861- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8233:701..1861- >mRNA_L-elsbetiae_contig8233.17238.1 ID=mRNA_L-elsbetiae_contig8233.17238.1|Name=mRNA_L-elsbetiae_contig8233.17238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2214bp|location=Sequence derived from alignment at L-elsbetiae_contig8233:701..1861- (Laminarionema elsbetiae ELsaHSoW15)back to top |