mRNA_L-elsbetiae_contig821.17213.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A6H5KM86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM86_9PHAE) HSP 1 Score: 382 bits (982), Expect = 1.170e-123 Identity = 168/223 (75.34%), Postives = 190/223 (85.20%), Query Frame = 3 Query: 9 RDGRPERQERLHDEVTLDWLWRSEIRDWLRMMAEAGFAYDTVAVLEVVRSWYFGSGPGRDEDTEDCKADLEEVCDIKDAPGFWLGTDIPNIEVRMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCGGSRPSGTSTWCSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVETCSHECKPRICGDFAPAAAD 677 R GRP+RQERL DEV L WLW+SE+RDWL M+EAGFAYDT+AVLEVVRSWY+G+GPGRDE+ E+ K LEE+CDIKDA GFWL TDIPN++VRMWYMQ LEKLWQLQLY+AATDII HCGDPYIA+MH QNTT+YP C GCG SR +GTSTWCSKC QAS C +CDLPVVGLYV CPGCHHGGHA H+M+WF +S+ECPVETCSH CKPR+ G P A D Sbjct: 412 RGGRPDRQERLRDEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVRSWYYGTGPGRDEEVEEEKTSLEEMCDIKDAAGFWLATDIPNLQVRMWYMQGLEKLWQLQLYAAATDIINHCGDPYIAEMHLQNTTVYPFCSGCGTSRSTGTSTWCSKCERQASLCALCDLPVVGLYVECPGCHHGGHAEHLMNWFEVSSECPVETCSHVCKPRLTGILKPEARD 634
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: D8LB28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB28_ECTSI) HSP 1 Score: 110 bits (275), Expect = 4.720e-26 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 3 Query: 387 QMHAQNTTLYPICGGCGGSRPSGTSTWCSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMM 581 +++ Q T +YP C GCG SR +GTSTWCSKC+ QAS C VCDLPVVGLY+ CPGCHHGGHA HMM Sbjct: 4 RVYPQPTRVYPFCSGCGTSRSTGTSTWCSKCARQASLCAVCDLPVVGLYIECPGCHHGGHAEHMM 68
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A067CU28_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CU28_SAPPC) HSP 1 Score: 105 bits (263), Expect = 1.190e-20 Identity = 58/141 (41.13%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 264 TDIPNIEVRMW----YMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCG-----------GSRPSGTSTWCSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVETCSHECKP 641 T+I I + W YM ++ L QLQLY+ A ++K+C D I QM+ + TT+Y C GCG S G C C + A+C +C LP GL+V CP C HGGH AHM +WFA CP CSH C P Sbjct: 674 TNIDAIMKKGWLQQVYMHYIDLLHQLQLYTVANHLVKNCPDTGIRQMNMKATTIYTSCSGCGKPIDPVLAAKNSSVKPGPQGLCQHCENLATC-SICQLPASGLFVWCPVCAHGGHLAHMEEWFATQQVCPTG-CSHVCAP 812
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A397SZI5_9GLOM (WD40-repeat-containing domain protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SZI5_9GLOM) HSP 1 Score: 105 bits (262), Expect = 1.510e-20 Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 270 IPNIEVRMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCGGSRP---SGTSTW-CSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVETCSHECKPRI 647 I V W+ +E L + QL+ AAT II C P + M+ Q+TT+Y C C RP S W C KC + C +C V GLY C GC HGGH AHM +WF++++ECP C H C RI Sbjct: 638 ISQERVEQWFFSYIELLHRFQLWCAATYIISSCRIPSVEMMNQQSTTIYTTCNNC--FRPILNSRCRYWICDKCRKMLNPCSICHNTVKGLYTWCQGCSHGGHLAHMKEWFSVNDECPTG-CGHNCSGRI 764
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A6U3UJF5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3UJF5_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.610e-20 Identity = 52/154 (33.77%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 192 DTEDCKADLEEVCDIKDAP---GFWLGTDIPNIE---VRMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCGGSRPSGTSTWCSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVETCSHEC 635 D + C L E+ D+ P G + +PN+ VR WY+ ++ L Q+ L++ A +IK+C DP + ++ Q+TT++ C CG G+++ C C + C +C V G++V CPGC HGGH H ++WF + CP C H+C Sbjct: 680 DVQSCVV-LCELMDVIVPPVTAGGLAKSRLPNLSIDVVREWYLSYIDLLQQMCLFTQAASLIKNCNDPVVGSLNQQSTTIHESCPVCGKPLQGGSNSSCKSCRRKVGTCFICHESVKGMFVWCPGCGHGGHLDHALEWFGKNEVCPTG-CGHKC 831
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: B8BQ09_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ09_THAPS) HSP 1 Score: 101 bits (251), Expect = 4.400e-19 Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = 3 Query: 216 LEEVCDIKDAP---GFWLGTDIPNIE---VRMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCGGSRPSGTSTW--------------CSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVETCSHEC 635 L EV D+ + P G + +PN+ VR WY+ ++ L Q+ L++ A IIK C DP I ++ Q+TTL+ C CG GT+T C C + C +C PV G+ V CPGC HGGH H ++WF + CPV C H C Sbjct: 862 LCEVMDVIEPPTVAGGVARSKLPNLSISLVREWYLSYVDLLQQMCLFTQAGLIIKKCKDPVIGALNQQSTTLHESCPLCGKPLLGGTTTQDDTGTNRHHVTQRVCKSCRGRIGMCFLCHEPVKGIMVWCPGCGHGGHLEHALEWFGTNEVCPVG-CGHRC 1020
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A8H3QZZ5_9GLOM (GATOR complex protein WDR24 n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3QZZ5_9GLOM) HSP 1 Score: 99.4 bits (246), Expect = 1.590e-18 Identity = 52/130 (40.00%), Postives = 64/130 (49.23%), Query Frame = 3 Query: 270 IPNIEVRMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCGGSRPSGT---STW-CSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVETCSHECKPRI 647 I V W +E L + QL+ AAT II C + M+ Q+TT+Y C C RP W C KC + C +C V GLY C GC HGGH AHM +WF ++NECP C H C I Sbjct: 644 ISQERVEQWLFSYIELLHRFQLWCAATHIISTCRISTVEMMNQQSTTIYTTCNNC--FRPMQNFRNGYWICEKCRKMLNSCSICHNTVKGLYTWCQGCSHGGHLAHMKEWFLVNNECPTG-CGHNCSIAI 770
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A1Z5JT55_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT55_FISSO) HSP 1 Score: 99.0 bits (245), Expect = 2.430e-18 Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = 3 Query: 270 IPNIEV---RMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCG-------GSRPSGTST----WCSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFAISNECPVET-----CSHEC 635 IPNI++ R WY+ ++ L + L+S A+ +I++C DP+I ++ Q+TT++ C CG G+ G S+ C C + C +C PV G+YV CPGC HGGH H ++WF SN PV C H C Sbjct: 799 IPNIDIELIREWYLAYIDILRDMCLFSQASHLIRNCHDPFIKALNKQSTTIHECCPSCGKLLLSSDGTDSIGDSSSVRRQCKSCRRRIGFCFLCHEPVKGIYVWCPGCGHGGHLEHALEWFGGSNGNPVREMCPTGCGHRC 939
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A1E7FHX1_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHX1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.070e-17 Identity = 58/167 (34.73%), Postives = 81/167 (48.50%), Query Frame = 3 Query: 216 LEEVCDIKDAPGFWLGTDIPNIEVRM---WYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCG------------------GSRPSGTSTWCSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWF------AISNECPVETCSHEC 635 L EV + D+ G T IP++ V++ WY+ ++ L Q+ L+SAA +IK+C D +A + Q+TT++ C CG G S C KC + C +C PV G+YV CPGC HGGH +H + WF AI CP C H C Sbjct: 854 LCEVLQVIDSGGE--QTLIPSLSVKLVREWYLSYIDLLNQMCLFSAAAFLIKNCKDQAVAALSQQSTTIHESCPRCGKPIDPVADSSDNGYNNTGGIASSSARKVCKKCRRRVGMCFICHEPVTGMYVWCPGCGHGGHMSHAIQWFGGPDGKAIRTVCPTG-CGHNC 1017
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Match: A0A6V2AHJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AHJ3_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.930e-16 Identity = 64/221 (28.96%), Postives = 98/221 (44.34%), Query Frame = 3 Query: 57 LDWLWRSEIRDWLRMMAEAGFAYDTVAVLEVVRSWYFGSGPGRDEDTEDCKADLEEVCDIKDAPGFWLGTDIPNIE---VRMWYMQCLEKLWQLQLYSAATDIIKHCGDPYIAQMHAQNTTLYPICGGCGGSRP-SGTSTW------------------CSKCSSQASCCPVCDLPVVGLYVGCPGCHHGGHAAHMMDWFA------ISNECPVETCSHEC 635 + +L ++ L A+AG VA+ EV+ + P + + K A G T +P +E VR WY+ +E L Q+ L+S ATD+I++C DP I ++ Q+TT++ C C +P G + + C C Q C +C V G++V CPGC HGGH H ++WF + CP C H+C Sbjct: 855 MSFLLFPTLKSLLIQRADAGDVQTCVAICEVMEVILSPASPTSKTNQRGTQ---------KSATGASQETLLPGLELDLVREWYLSYIELLQQMCLFSDATDLIRNCRDPVINALNQQSTTIHEACSLC--KKPIQGVAAYSTEGSTLNETLLPTAQRVCKSCRRQIGRCWICHEAVKGIFVWCPGCGHGGHIDHTLEWFGGRGERTLRESCPTG-CGHKC 1063 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig821.17213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig821.17213.1 >prot_L-elsbetiae_contig821.17213.1 ID=prot_L-elsbetiae_contig821.17213.1|Name=mRNA_L-elsbetiae_contig821.17213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp MMAEAGFAYDTVAVLEVVRSWYFGSGPGRDEDTEDCKADLEEVCDIKDAPback to top mRNA from alignment at L-elsbetiae_contig821:9545..13068- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig821.17213.1 ID=mRNA_L-elsbetiae_contig821.17213.1|Name=mRNA_L-elsbetiae_contig821.17213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3524bp|location=Sequence derived from alignment at L-elsbetiae_contig821:9545..13068- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig821:9545..13068- >mRNA_L-elsbetiae_contig821.17213.1 ID=mRNA_L-elsbetiae_contig821.17213.1|Name=mRNA_L-elsbetiae_contig821.17213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig821:9545..13068- (Laminarionema elsbetiae ELsaHSoW15)back to top |