mRNA_L-elsbetiae_contig8206.17210.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: D8LM53_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM53_ECTSI) HSP 1 Score: 313 bits (801), Expect = 3.860e-103 Identity = 150/173 (86.71%), Postives = 159/173 (91.91%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERATRENEFWKAYDLPKVVGTLSEADALKEKIAGLRVTYASLSGLYQESKDGANIPRIPLS 520 EAVK+GNKVFGAAILKLSDLSLV GTNTEIECPLWHGE+ACIKNFW+LPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRI++EVFKCERATREN+FWKAYDLPKVV TL E AL EK+ LR TYASLS LYQ+SK GA+ RIPLS Sbjct: 29 EAVKKGNKVFGAAILKLSDLSLVVAGTNTEIECPLWHGEVACIKNFWNLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIYQEVFKCERATRENKFWKAYDLPKVVETLPENGALGEKVTMLRETYASLSELYQDSKGGASSTRIPLS 201
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: A0A1H4JNY7_9HYPH (tRNA(Arg) A34 adenosine deaminase TadA n=10 Tax=Proteobacteria TaxID=1224 RepID=A0A1H4JNY7_9HYPH) HSP 1 Score: 201 bits (510), Expect = 2.330e-59 Identity = 98/170 (57.65%), Postives = 122/170 (71.76%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADALKEKIAGLRVTYASLSGLYQESKDGANIP 505 E V GNK+FGAAILK SDLSLV TN E+E PLWHGE+ +K F++LP+E RP ++C+ L+THEPCS+C+SAITW+ F ++LFS EDSRDAF IPHDL+I KEVF E EN FWK+Y LP + L EA+ALK +IA L YA+LS YQ+SK +IP Sbjct: 26 EGVAHGNKLFGAAILKKSDLSLVLAETNNELENPLWHGEVHTLKRFYELPKEERPDTTDCIFLSTHEPCSLCLSAITWTGFDNFYYLFSHEDSRDAFAIPHDLKILKEVFTLEPGGYNAENAFWKSYALPALATALPEAEALKARIATLAAAYAALSQRYQDSKAENDIP 195
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: K2N1Z2_9HYPH (Zinc-binding CMP/dCMP deaminase n=1 Tax=Nitratireductor pacificus pht-3B TaxID=391937 RepID=K2N1Z2_9HYPH) HSP 1 Score: 201 bits (510), Expect = 2.490e-59 Identity = 96/170 (56.47%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 8 VKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADAL--KEKIAGLRVTYASLSGLYQESKDGANIP 505 V+RGNK+FGAAIL+ SDLSLV TN E+E PLWHGEM +K F++LP+ RP +C+ L+THEPCS+C+SAITW+ F H+LFS EDSRD+F IPHDLRI KEVF + EN FWK+Y LP + L EADAL +IA L+ Y LSG+YQ+ K +IP Sbjct: 28 VERGNKLFGAAILRKSDLSLVIAETNNELENPLWHGEMHALKRFYELPQASRPDTKDCIFLSTHEPCSLCLSAITWTGFDNFHYLFSHEDSRDSFAIPHDLRILKEVFTLDAGGYNAENAFWKSYSLPALAAALPEADALAASARIAALKAAYDGLSGIYQQGKAENSIP 197
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: D2Z8Q5_9BACT (CMP/dCMP deaminase zinc-binding n=3 Tax=Synergistaceae TaxID=649777 RepID=D2Z8Q5_9BACT) HSP 1 Score: 197 bits (500), Expect = 6.000e-58 Identity = 89/168 (52.98%), Postives = 124/168 (73.81%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERATRENEFWKAYDLPKVVGTLSEADALKEKIAGLRVTYASLSGLYQESKDGANIP 505 + V+ G+KVFGAAILK DLSLV GTN E+ECPLWHGE+ IK F+++ RP P +C+ L+THEPCSMC+SAI W+ F E +FLFS +D+++AF+IPHD+++ KEVF+C+ TREN F++A+ L +V L + D KE+I+ ++ Y S+S LYQ KD +IP Sbjct: 24 KGVEEGHKVFGAAILKKDDLSLVVAGTNHELECPLWHGEVYTIKKFYEM--SNRPDPKDCVFLSTHEPCSMCLSAIAWAGFPEFYFLFSYDDTKNAFSIPHDIKMLKEVFECDAPTRENSFYRAHPLMDMVPDLDDPDDAKERISRIQCEYDSMSSLYQSRKDTNSIP 189
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: A0A256FSF7_9HYPH (Cytidine and deoxycytidylate deaminase zinc-binding region family protein n=14 Tax=Brucella/Ochrobactrum group TaxID=2826938 RepID=A0A256FSF7_9HYPH) HSP 1 Score: 196 bits (498), Expect = 1.230e-57 Identity = 93/172 (54.07%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADA--LKEKIAGLRVTYASLSGLYQESKDGANIP 505 + V GNKVFGAA+L+ SDLSLV TN E E PLWHGE+ +K F+++PE+GRP + L+THEPCSMC+SAITWS F ++LFS EDSRDAF+IPHDL+I KEVF E R+N FW ++ +PK+V +L E D L+ ++ +R Y ++SG YQ SKDG IP Sbjct: 19 QGVAEGNKVFGAALLRKSDLSLVLAETNNETENPLWHGEVHTLKRFYEMPEQGRPDTKNMVFLSTHEPCSMCLSAITWSGFDNFYYLFSHEDSRDAFSIPHDLKILKEVFTLEPGGYNRDNSFWHSHSIPKMVASLPEPDRARLENRLEAIRAKYDAMSGTYQSSKDGNAIP 190
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: UPI001654C603 (nucleoside deaminase n=2 Tax=Brucella/Ochrobactrum group TaxID=2826938 RepID=UPI001654C603) HSP 1 Score: 194 bits (493), Expect = 8.590e-57 Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADA--LKEKIAGLRVTYASLSGLYQESKDGANIP 505 + V GNKVFGAA+L SDLSLV TN E E PLWHGE+ +K F+++PE+GRP E + L+THEPCSMC+SAITWS F ++LFS EDSRDAF+IPHDL+I KEVF E R N FW ++ +P +V +L E D L++++ +R Y ++SG YQ SKDG IP Sbjct: 26 QGVAEGNKVFGAALLNKSDLSLVLAETNNETENPLWHGEVHTLKRFYEMPEQGRPNTKEMVFLSTHEPCSMCLSAITWSGFDNFYYLFSHEDSRDAFSIPHDLKILKEVFTLEPGGYNRNNSFWHSHSIPNMVASLPEPDRSRLEKRLDAIRKKYDAMSGTYQSSKDGNAIP 197
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: K2PN27_9HYPH (Zinc-binding CMP/dCMP deaminase n=1 Tax=Nitratireductor indicus C115 TaxID=1231190 RepID=K2PN27_9HYPH) HSP 1 Score: 192 bits (488), Expect = 4.490e-56 Identity = 93/172 (54.07%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADA--LKEKIAGLRVTYASLSGLYQESKDGANIP 505 E V GNK+FGAAIL+ DLSLV TN E+E PLWHGE+ +K F+++P+ RP S+C+ L+THEPCS+C+SAITW+ F H+LFS EDSRD+F IPHDL+I KEVF E EN FWK+Y +P + TL EA+A +I + YA LS YQESK G +IP Sbjct: 24 EGVAHGNKLFGAAILRRDDLSLVLAETNNELENPLWHGEVHALKRFYEMPKTSRPDTSDCIFLSTHEPCSLCLSAITWTGFDNFHYLFSHEDSRDSFAIPHDLKILKEVFTLEPGGYNAENAFWKSYAIPALARTLPEAEARVALARIEAIGAAYAELSDAYQESKAGNDIP 195
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: A0A3P1US22_9HYPH (Nucleoside deaminase n=8 Tax=Brucellaceae TaxID=118882 RepID=A0A3P1US22_9HYPH) HSP 1 Score: 192 bits (487), Expect = 6.750e-56 Identity = 91/172 (52.91%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADA--LKEKIAGLRVTYASLSGLYQESKDGANIP 505 + V GNK+FGAA+L+ SDLSLV TN E E PLWHGE+ +K F+++PE+GRP + + +THEPCSMC+SAITWS F ++LFS EDSRDAF+IPHDL+I KEVF E R+N FW ++ LPK+V +L E D L++++ +R Y ++SG YQ KDG IP Sbjct: 26 KGVAAGNKIFGAALLQKSDLSLVLAETNNETENPLWHGEVHTLKRFYEMPEKGRPNTKDMVFFSTHEPCSMCLSAITWSGFDNFYYLFSHEDSRDAFSIPHDLKILKEVFTLEPGGYNRDNAFWHSHSLPKLVASLPEPDRSRLEKRLDAIRAKYDAMSGAYQAHKDGNAIP 197
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: A0A1X7L9P3_9BACT (tRNA(Arg) A34 adenosine deaminase TadA n=1 Tax=Dethiosulfovibrio salsuginis TaxID=561720 RepID=A0A1X7L9P3_9BACT) HSP 1 Score: 191 bits (485), Expect = 1.040e-55 Identity = 87/168 (51.79%), Postives = 123/168 (73.21%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERATRENEFWKAYDLPKVVGTLSEADALKEKIAGLRVTYASLSGLYQESKDGANIP 505 + V G+KVFGAA+L DLSLV GTN E+ECPLWHGE+ IK F+ + E RP P++C+ L+THEPCSMC+S+I W+ F E +FLFS ED++D+F+IPHD+++ KEVF C+ +REN F+KA+ L +++ +LS+ + KE+IA ++ Y LS YQ KD +IP Sbjct: 24 QGVADGHKVFGAAVLLKKDLSLVLAGTNHELECPLWHGEVYTIKEFYRM--ENRPDPADCVFLSTHEPCSMCLSSIAWAGFPEFYFLFSYEDTKDSFSIPHDIKMIKEVFLCDAPSRENSFYKAHPLVEMIPSLSDPEGAKERIAKIQDEYDELSRTYQARKDDNSIP 189
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Match: A0A7V6ZKW7_9HYPH (Nucleoside deaminase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7V6ZKW7_9HYPH) HSP 1 Score: 190 bits (482), Expect = 3.530e-55 Identity = 92/172 (53.49%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 2 EAVKRGNKVFGAAILKLSDLSLVAVGTNTEIECPLWHGEMACIKNFWDLPEEGRPLPSECLMLATHEPCSMCVSAITWSAFKEIHFLFSMEDSRDAFNIPHDLRIFKEVFKCERA--TRENEFWKAYDLPKVVGTLSEADA--LKEKIAGLRVTYASLSGLYQESKDGANIP 505 E V RGNK+FGAAIL+ SDLS+V +N E E PLWHGE+ +K F++LP+ RP P +CL LATHEPCS+C+SAITW+ + +FLFS EDSRD+F IPHDLRI KEVF+ + EN +WK+Y + KV+ TL +A+ L+ + A + Y LS +YQ SKD +IP Sbjct: 24 EGVARGNKLFGAAILRKSDLSVVVAESNNETENPLWHGEVHALKRFYELPKADRPDPKDCLFLATHEPCSLCLSAITWTGYDNFYFLFSHEDSRDSFAIPHDLRILKEVFRLDPGGYAAENAYWKSYSIRKVMRTLPDAEQARLEARRAAIARRYDELSSVYQASKDDNDIP 195 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8206.17210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8206.17210.1 >prot_L-elsbetiae_contig8206.17210.1 ID=prot_L-elsbetiae_contig8206.17210.1|Name=mRNA_L-elsbetiae_contig8206.17210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp GSGQEGKQGFRCCHSQAFRPEPGCGRHQHGDRVPPLAWRDGLHKELLGLAback to top mRNA from alignment at L-elsbetiae_contig8206:3537..7396+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8206.17210.1 ID=mRNA_L-elsbetiae_contig8206.17210.1|Name=mRNA_L-elsbetiae_contig8206.17210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3860bp|location=Sequence derived from alignment at L-elsbetiae_contig8206:3537..7396+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8206:3537..7396+ >mRNA_L-elsbetiae_contig8206.17210.1 ID=mRNA_L-elsbetiae_contig8206.17210.1|Name=mRNA_L-elsbetiae_contig8206.17210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig8206:3537..7396+ (Laminarionema elsbetiae ELsaHSoW15)back to top |