mRNA_L-elsbetiae_contig8197.17192.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 2.060e-196 Identity = 300/320 (93.75%), Postives = 306/320 (95.62%), Query Frame = 1 Query: 1 AEFTLEALFEDPESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVVPTTPFPPAAV-PAAGAAG 957 +EFTLEALFEDPESVYRGR LTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGN G EMD KKPRFCFQISESANPVHLVISDDDA AVLDLVNKTGLC+REPADVCGTLVSVA+DGVLSKAAFD+CIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDN+SSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDE AAWYTEGGFRVSPWLELLDMGKWVVP+ PPAA PAAGA G Sbjct: 908 SEFTLEALFEDPESVYRGRTNLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNNGAEMD--KKPRFCFQISESANPVHLVISDDDATAVLDLVNKTGLCNREPADVCGTLVSVAKDGVLSKAAFDKCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNTSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDMGKWVVPSNALPPAAAAPAAGAVG 1225
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE) HSP 1 Score: 571 bits (1472), Expect = 5.600e-191 Identity = 289/310 (93.23%), Postives = 298/310 (96.13%), Query Frame = 1 Query: 1 AEFTLEALFEDPESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVVPTTPFPPA 930 +EFTLEALFEDPESVY+GR LTFEEFGLWYNEGGF+SVPWMELVDLSKWVPGVGALRPVMEGPLGN G EMD KKPRFCFQISESANPVHLVISDDDA AVLDLVNKTGLC+REPADVCGTLVSVA+DGVLSKAAFD+CIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDN+SSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDE AAWYTEGGFRVSPWLELLD+GKWV P+ PPA Sbjct: 920 SEFTLEALFEDPESVYKGRTNLTFEEFGLWYNEGGFRSVPWMELVDLSKWVPGVGALRPVMEGPLGNNGAEMD--KKPRFCFQISESANPVHLVISDDDATAVLDLVNKTGLCNREPADVCGTLVSVAKDGVLSKAAFDKCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNTSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDIGKWVAPSNALPPA 1227
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK) HSP 1 Score: 231 bits (590), Expect = 2.590e-71 Identity = 114/209 (54.55%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 277 LVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWV 903 L ++ D V L +TGL R+P VCG L++ AE+G+LSK FDRC+R ++PA L EEK FS LLS++F+++DRD SS D +E GF+LLCAG+KS KLA+AF L DEDGD RL+RRGLWR+ R+FL+ LM++S +SS+ A EL +D+GAVWT+A IF + N+I F+E+AAWYTEGG+R+SPWLELLD+ KW+ Sbjct: 2 LALTAADVARVQRLAARTGLRGRDPRAVCGGLLAFAEEGLLSKKQFDRCVRRLIPAQSLTAEEKAEFSALLSALFYAYDRDGSSQVDVLEFMGGFALLCAGNKSGKLAYAFDLLDEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWYTEGGYRLSPWLELLDLKKWL 210
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.420e-70 Identity = 128/235 (54.47%), Postives = 164/235 (69.79%), Query Frame = 1 Query: 223 QKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAE-DGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAET-ATQTPNRIGFDEVAAWYTEG-------GFRVSPWLELLDMGKW 900 Q PRF FQISES+ L I ++DA AV++LV++TGL EP +CG L+ A+ +G LSK AFD+C++ + + L +E+T +VLLSSI+++FDR N DA+ELA+GFS+LC G+KS+KL +A+ L D D LTRRGLWRY RSFLT LMALS AS +L+A+ELTRAVDD AVW SA +FA+ A RI F ++A WYTEG GF SPWLELLDM KW Sbjct: 36 QPAPRFYFQISESSAATPLSIEENDARAVMELVDRTGLARAEPQRICGALLRAADAEGALSKRAFDQCMQVLALGAQLKAQERTRCAVLLSSIYYAFDRGNDGRVDALELATGFSILCGGNKSSKLVYAWDLL-ADADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVFADLRAADAATRITFTDLADWYTEGLERSAAPGFMTSPWLELLDMSKW 269
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A6U1MRH8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRH8_9STRA) HSP 1 Score: 211 bits (536), Expect = 8.310e-63 Identity = 111/230 (48.26%), Postives = 152/230 (66.09%), Query Frame = 1 Query: 250 ISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASL-----------LDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVV 906 + E V L +S+ D + V L ++TG +P VC L+ ++DG+LSK FDR + +VP + EE+++F LLSSIF+++DRD++S D +E +SGFSLLC GSKS KL++AF L DED D++L+RRGLWRY RSFLT LM S A+S LS EEL A+D GAV +A I+ ET + N+I F+E+AAWYT GG+ +PWLELLD+ KW+V Sbjct: 15 LREEDQGVALALSELDVHLVTQLAHRTGFSQMDPQKVCPVLMEYSDDGLLSKREFDRFLSELVPDLFGGGPLMEGEPPMTDEERSAFGSLLSSIFYAYDRDSTSQVDVLEFSSGFSLLCHGSKSTKLSYAFDLLDEDEDQKLSRRGLWRYLRSFLTVLMGASLANSGLSGEELVWAIDSGAVHAAAVIYQETEREEKNKISFEELAAWYTNGGYWFAPWLELLDLKKWLV 244
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S1G6W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6W4_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.050e-54 Identity = 118/294 (40.14%), Postives = 162/294 (55.10%), Query Frame = 1 Query: 19 ALFEDPESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKW 900 A+F + GR +++EEFG WYN GGF +PW+EL+DL KW P + G D +P F FQ+S + + D AN + L +K L P + S A+DGVL K+ FDR +R +VP L E+K S LS++F++FDRD + D E ASGFS+L GSKS KL+ AF L D D D ++RR LW Y R+FLT L+AL+ + +EL +D A+ + +F + T +RI ++E WY EGGF V PWLELLD+ KW Sbjct: 214 AVFSSADLDDDGR--ISYEEFGQWYNAGGFDIIPWLELLDLRKW--------PELSDEDDYEG-SADEGAEPVFEFQLSAEGGDALQITASDVAN-LQRLNDKARLQRMSPEQLYRAFASEAKDGVLDKSGFDRVVRQLVPGESLTKEDKGYLSFALSNVFYAFDRDQNGVVDFNEFASGFSILAGGSKSDKLSLAFHLFDLDSDGYISRRELWEYLRAFLTVLVALNGGMQDVDPKELVVLIDRNALELTGTVFEQADTDEDDRISYEEFGQWYNEGGFEVIPWLELLDLRKW 495
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S2D6K2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6K2_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.090e-53 Identity = 118/308 (38.31%), Postives = 166/308 (53.90%), Query Frame = 1 Query: 64 LTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGN-GGLEMDNQKKP----------------------RFCFQ-ISESANPVHLV-ISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSS--ADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVV 906 +TF++FG WYN+ GF VPW+EL+DLSKW P GA P G+ GG E RF F + E++ P V IS D A+ LV KT L + P C L+ + DGVL K FD+C+R +V ++ L +++ +FSV+LS+IF+SF+ D AD +ELA G ++LC G KS+KL +A+ + + D L L Y RSFL L+A+SF +SS E A W + +I + A + FD+ A WYT+GG+ V+PWLELLD+ KWV+ Sbjct: 40 ITFDQFGAWYNDRGFSLVPWLELLDLSKWNPAQGA-------PNGSKGGAERRXXXXXXXXXXXXXXXXXXXXXXXXDDVRFSFVLVDETSTPAFTVEISGMDMKAIHSLVTKTALVNLAPNSFCAPLLESSMDGVLDKRFFDKCMRKLVKSTNLSKDDQNAFSVILSAIFYSFEADEGEDEGADCVELAIGMAMLCTGDKSSKLLYAWQVMSGEVDGCLDFASLQSYIRSFLRMLIAISFDASSHRTAETKAYASGMAAWVTESIMRDYADADTEMVVFDDFAQWYTDGGYEVAPWLELLDLSKWVL 340
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A812UYR4_SYMMI (Calmodulin (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UYR4_SYMMI) HSP 1 Score: 166 bits (419), Expect = 6.610e-43 Identity = 120/330 (36.36%), Postives = 176/330 (53.33%), Query Frame = 1 Query: 37 ESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVP------GVGAL-------RPVMEGPLGNGGLEMD----NQKKPRFCFQISESANPVHLV-ISDDDANAVLDLVNKTGLCDREPADVC-GTLVSVAEDGVLSKAAFDRCI--------------------RGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAE-TATQTPNRIG--FDEVAAWYTEGGFRVSPWLELLDMGKW 900 E++ RG+ + F+ FG WYNEGGFK + W+EL+DLSKW+ VG R + + +GG+ D ++++P + N H+V IS D V L +GL + EP + L + D ++++ FDR I RG P+S EK S + L S+F SFDR DA+E+A G S+LC+GSKS+KLA AF L DE+ L+R LW++ RSFL L+ LS A+ LS++E+TR D A++ ++ T T+ ++ FD++A WYT G+R++PWLELLDM KW Sbjct: 164 ENISRGQL-VDFQCFGDWYNEGGFKVISWIELIDLSKWIKISTANAAVGRTNRSLPLDRRMYSNVVMDGGVSKDCDDTDEEEPYAFTLMLYRRNAKHVVSISTDSVETVRTLSVASGLANIEPEQIGQAVLACSSSDLLINRKEFDRLIQRINPDRRKQYYADMTARATRGEAPSSPFS--EKNSDA--LGSLFNSFDRTGKGVVDAMEVAVGLSILCSGSKSSKLASAFELLDENKSGLLSRWRLWKFFRSFLCTLLTLSGAAQELSSDEITRVADGTALFACDSVLTSPTTTEKEDQYAATFDDIADWYTSAGYRIAPWLELLDMTKW 488
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S0GD91_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD91_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.330e-42 Identity = 93/236 (39.41%), Postives = 136/236 (57.63%), Query Frame = 1 Query: 235 RFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLV--SVAEDGVLSKAAFDRCIRGMVP--ASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFA--------ETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVV 906 +F +++ + I+ D + L+ ++G R +V L+ S A G+LSK +D +R +V + E + S LLSSIFF+F RD SS A+ELASGF++LC G KS KL FAF L D+D D RL+RRGLW+Y RSFLT LM++S AS++++ + A+D + W +A +F + + FD+ A WYT+GG+ PWLELLD+ KWV+ Sbjct: 10 KFHLHTNDTHGGYLVSITQDRVTRLRQLIQESGFDRRNVHEVTQVLLQNSNANTGLLSKDQYDNAMRNIVSNGGGSMSQESQRRLSDLLSSIFFAFVRDKSSRVVALELASGFTVLCGGRKSDKLEFAFDLIDDDKDGRLSRRGLWKYLRSFLTVLMSISSASANMTEGHIYSAIDSASTWATAQVFGAEQDKGLGNNDNSSKRSVCFDDFAEWYTQGGYGSIPWLELLDLKKWVL 245
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A6U4G7P4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G7P4_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.800e-41 Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 382 AEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSS-LSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWV 903 ++ GV +K+ FD R +V +D E+ + S LL S+FFSFDR SS D E+ +GFS+LC GSKS KLAFAF + D G L+RR LWR+ R+FLTAL A SF S + E AVD A+WT+ +F + NR F+++A WY EGG+ +PWLELLD+ KWV Sbjct: 102 SDGGVCAKSGFDESCRELVEMDGMDDTERNTCSTLLQSLFFSFDRAEQSSVDVCEIINGFSILCGGSKSTKLAFAFDVLDTKGKGALSRRSLWRFFRAFLTALCAFSFESGADRDPHETGVAVDAAAIWTATKVFEKKEVDRANRATFNDIAQWYGEGGYTKAPWLELLDLRKWV 276 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8197.17192.1 >prot_L-elsbetiae_contig8197.17192.1 ID=prot_L-elsbetiae_contig8197.17192.1|Name=mRNA_L-elsbetiae_contig8197.17192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp MELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVback to top mRNA from alignment at L-elsbetiae_contig8197:4484..8563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8197.17192.1 ID=mRNA_L-elsbetiae_contig8197.17192.1|Name=mRNA_L-elsbetiae_contig8197.17192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4080bp|location=Sequence derived from alignment at L-elsbetiae_contig8197:4484..8563- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8197:4484..8563- >mRNA_L-elsbetiae_contig8197.17192.1 ID=mRNA_L-elsbetiae_contig8197.17192.1|Name=mRNA_L-elsbetiae_contig8197.17192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1686bp|location=Sequence derived from alignment at L-elsbetiae_contig8197:4484..8563- (Laminarionema elsbetiae ELsaHSoW15)back to top |