mRNA_L-elsbetiae_contig8197.17192.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8197.17192.1
Unique NamemRNA_L-elsbetiae_contig8197.17192.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 2.060e-196
Identity = 300/320 (93.75%), Postives = 306/320 (95.62%), Query Frame = 1
Query:    1 AEFTLEALFEDPESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVVPTTPFPPAAV-PAAGAAG 957
            +EFTLEALFEDPESVYRGR  LTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGN G EMD  KKPRFCFQISESANPVHLVISDDDA AVLDLVNKTGLC+REPADVCGTLVSVA+DGVLSKAAFD+CIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDN+SSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDE AAWYTEGGFRVSPWLELLDMGKWVVP+   PPAA  PAAGA G
Sbjct:  908 SEFTLEALFEDPESVYRGRTNLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNNGAEMD--KKPRFCFQISESANPVHLVISDDDATAVLDLVNKTGLCNREPADVCGTLVSVAKDGVLSKAAFDKCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNTSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDMGKWVVPSNALPPAAAAPAAGAVG 1225          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE)

HSP 1 Score: 571 bits (1472), Expect = 5.600e-191
Identity = 289/310 (93.23%), Postives = 298/310 (96.13%), Query Frame = 1
Query:    1 AEFTLEALFEDPESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVVPTTPFPPA 930
            +EFTLEALFEDPESVY+GR  LTFEEFGLWYNEGGF+SVPWMELVDLSKWVPGVGALRPVMEGPLGN G EMD  KKPRFCFQISESANPVHLVISDDDA AVLDLVNKTGLC+REPADVCGTLVSVA+DGVLSKAAFD+CIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDN+SSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDE AAWYTEGGFRVSPWLELLD+GKWV P+   PPA
Sbjct:  920 SEFTLEALFEDPESVYKGRTNLTFEEFGLWYNEGGFRSVPWMELVDLSKWVPGVGALRPVMEGPLGNNGAEMD--KKPRFCFQISESANPVHLVISDDDATAVLDLVNKTGLCNREPADVCGTLVSVAKDGVLSKAAFDKCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNTSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDIGKWVAPSNALPPA 1227          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK)

HSP 1 Score: 231 bits (590), Expect = 2.590e-71
Identity = 114/209 (54.55%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  277 LVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWV 903
            L ++  D   V  L  +TGL  R+P  VCG L++ AE+G+LSK  FDRC+R ++PA  L  EEK  FS LLS++F+++DRD SS  D +E   GF+LLCAG+KS KLA+AF L DEDGD RL+RRGLWR+ R+FL+ LM++S  +SS+ A EL   +D+GAVWT+A IF +      N+I F+E+AAWYTEGG+R+SPWLELLD+ KW+
Sbjct:    2 LALTAADVARVQRLAARTGLRGRDPRAVCGGLLAFAEEGLLSKKQFDRCVRRLIPAQSLTAEEKAEFSALLSALFYAYDRDGSSQVDVLEFMGGFALLCAGNKSGKLAYAFDLLDEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWYTEGGYRLSPWLELLDLKKWL 210          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.420e-70
Identity = 128/235 (54.47%), Postives = 164/235 (69.79%), Query Frame = 1
Query:  223 QKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAE-DGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAET-ATQTPNRIGFDEVAAWYTEG-------GFRVSPWLELLDMGKW 900
            Q  PRF FQISES+    L I ++DA AV++LV++TGL   EP  +CG L+  A+ +G LSK AFD+C++ +   + L  +E+T  +VLLSSI+++FDR N    DA+ELA+GFS+LC G+KS+KL +A+ L   D D  LTRRGLWRY RSFLT LMALS AS +L+A+ELTRAVDD AVW SA +FA+  A     RI F ++A WYTEG       GF  SPWLELLDM KW
Sbjct:   36 QPAPRFYFQISESSAATPLSIEENDARAVMELVDRTGLARAEPQRICGALLRAADAEGALSKRAFDQCMQVLALGAQLKAQERTRCAVLLSSIYYAFDRGNDGRVDALELATGFSILCGGNKSSKLVYAWDLL-ADADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVFADLRAADAATRITFTDLADWYTEGLERSAAPGFMTSPWLELLDMSKW 269          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A6U1MRH8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRH8_9STRA)

HSP 1 Score: 211 bits (536), Expect = 8.310e-63
Identity = 111/230 (48.26%), Postives = 152/230 (66.09%), Query Frame = 1
Query:  250 ISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASL-----------LDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVV 906
            + E    V L +S+ D + V  L ++TG    +P  VC  L+  ++DG+LSK  FDR +  +VP              +  EE+++F  LLSSIF+++DRD++S  D +E +SGFSLLC GSKS KL++AF L DED D++L+RRGLWRY RSFLT LM  S A+S LS EEL  A+D GAV  +A I+ ET  +  N+I F+E+AAWYT GG+  +PWLELLD+ KW+V
Sbjct:   15 LREEDQGVALALSELDVHLVTQLAHRTGFSQMDPQKVCPVLMEYSDDGLLSKREFDRFLSELVPDLFGGGPLMEGEPPMTDEERSAFGSLLSSIFYAYDRDSTSQVDVLEFSSGFSLLCHGSKSTKLSYAFDLLDEDEDQKLSRRGLWRYLRSFLTVLMGASLANSGLSGEELVWAIDSGAVHAAAVIYQETEREEKNKISFEELAAWYTNGGYWFAPWLELLDLKKWLV 244          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S1G6W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6W4_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.050e-54
Identity = 118/294 (40.14%), Postives = 162/294 (55.10%), Query Frame = 1
Query:   19 ALFEDPESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKW 900
            A+F   +    GR  +++EEFG WYN GGF  +PW+EL+DL KW        P +       G   D   +P F FQ+S        + + D AN +  L +K  L    P  +     S A+DGVL K+ FDR +R +VP   L  E+K   S  LS++F++FDRD +   D  E ASGFS+L  GSKS KL+ AF L D D D  ++RR LW Y R+FLT L+AL+     +  +EL   +D  A+  +  +F +  T   +RI ++E   WY EGGF V PWLELLD+ KW
Sbjct:  214 AVFSSADLDDDGR--ISYEEFGQWYNAGGFDIIPWLELLDLRKW--------PELSDEDDYEG-SADEGAEPVFEFQLSAEGGDALQITASDVAN-LQRLNDKARLQRMSPEQLYRAFASEAKDGVLDKSGFDRVVRQLVPGESLTKEDKGYLSFALSNVFYAFDRDQNGVVDFNEFASGFSILAGGSKSDKLSLAFHLFDLDSDGYISRRELWEYLRAFLTVLVALNGGMQDVDPKELVVLIDRNALELTGTVFEQADTDEDDRISYEEFGQWYNEGGFEVIPWLELLDLRKW 495          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S2D6K2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6K2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.090e-53
Identity = 118/308 (38.31%), Postives = 166/308 (53.90%), Query Frame = 1
Query:   64 LTFEEFGLWYNEGGFKSVPWMELVDLSKWVPGVGALRPVMEGPLGN-GGLEMDNQKKP----------------------RFCFQ-ISESANPVHLV-ISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSS--ADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVV 906
            +TF++FG WYN+ GF  VPW+EL+DLSKW P  GA       P G+ GG E                             RF F  + E++ P   V IS  D  A+  LV KT L +  P   C  L+  + DGVL K  FD+C+R +V ++ L  +++ +FSV+LS+IF+SF+ D      AD +ELA G ++LC G KS+KL +A+ +   + D  L    L  Y RSFL  L+A+SF +SS    E        A W + +I  + A      + FD+ A WYT+GG+ V+PWLELLD+ KWV+
Sbjct:   40 ITFDQFGAWYNDRGFSLVPWLELLDLSKWNPAQGA-------PNGSKGGAERRXXXXXXXXXXXXXXXXXXXXXXXXDDVRFSFVLVDETSTPAFTVEISGMDMKAIHSLVTKTALVNLAPNSFCAPLLESSMDGVLDKRFFDKCMRKLVKSTNLSKDDQNAFSVILSAIFYSFEADEGEDEGADCVELAIGMAMLCTGDKSSKLLYAWQVMSGEVDGCLDFASLQSYIRSFLRMLIAISFDASSHRTAETKAYASGMAAWVTESIMRDYADADTEMVVFDDFAQWYTDGGYEVAPWLELLDLSKWVL 340          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A812UYR4_SYMMI (Calmodulin (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UYR4_SYMMI)

HSP 1 Score: 166 bits (419), Expect = 6.610e-43
Identity = 120/330 (36.36%), Postives = 176/330 (53.33%), Query Frame = 1
Query:   37 ESVYRGRAGLTFEEFGLWYNEGGFKSVPWMELVDLSKWVP------GVGAL-------RPVMEGPLGNGGLEMD----NQKKPRFCFQISESANPVHLV-ISDDDANAVLDLVNKTGLCDREPADVC-GTLVSVAEDGVLSKAAFDRCI--------------------RGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAE-TATQTPNRIG--FDEVAAWYTEGGFRVSPWLELLDMGKW 900
            E++ RG+  + F+ FG WYNEGGFK + W+EL+DLSKW+        VG         R +    + +GG+  D    ++++P     +    N  H+V IS D    V  L   +GL + EP  +    L   + D ++++  FDR I                    RG  P+S     EK S +  L S+F SFDR      DA+E+A G S+LC+GSKS+KLA AF L DE+    L+R  LW++ RSFL  L+ LS A+  LS++E+TR  D  A++   ++    T T+  ++    FD++A WYT  G+R++PWLELLDM KW
Sbjct:  164 ENISRGQL-VDFQCFGDWYNEGGFKVISWIELIDLSKWIKISTANAAVGRTNRSLPLDRRMYSNVVMDGGVSKDCDDTDEEEPYAFTLMLYRRNAKHVVSISTDSVETVRTLSVASGLANIEPEQIGQAVLACSSSDLLINRKEFDRLIQRINPDRRKQYYADMTARATRGEAPSSPFS--EKNSDA--LGSLFNSFDRTGKGVVDAMEVAVGLSILCSGSKSSKLASAFELLDENKSGLLSRWRLWKFFRSFLCTLLTLSGAAQELSSDEITRVADGTALFACDSVLTSPTTTEKEDQYAATFDDIADWYTSAGYRIAPWLELLDMTKW 488          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A7S0GD91_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD91_9STRA)

HSP 1 Score: 157 bits (396), Expect = 5.330e-42
Identity = 93/236 (39.41%), Postives = 136/236 (57.63%), Query Frame = 1
Query:  235 RFCFQISESANPVHLVISDDDANAVLDLVNKTGLCDREPADVCGTLV--SVAEDGVLSKAAFDRCIRGMVP--ASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFA--------ETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWVV 906
            +F    +++     + I+ D    +  L+ ++G   R   +V   L+  S A  G+LSK  +D  +R +V      +  E +   S LLSSIFF+F RD SS   A+ELASGF++LC G KS KL FAF L D+D D RL+RRGLW+Y RSFLT LM++S AS++++   +  A+D  + W +A +F              +   + FD+ A WYT+GG+   PWLELLD+ KWV+
Sbjct:   10 KFHLHTNDTHGGYLVSITQDRVTRLRQLIQESGFDRRNVHEVTQVLLQNSNANTGLLSKDQYDNAMRNIVSNGGGSMSQESQRRLSDLLSSIFFAFVRDKSSRVVALELASGFTVLCGGRKSDKLEFAFDLIDDDKDGRLSRRGLWKYLRSFLTVLMSISSASANMTEGHIYSAIDSASTWATAQVFGAEQDKGLGNNDNSSKRSVCFDDFAEWYTQGGYGSIPWLELLDLKKWVL 245          
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Match: A0A6U4G7P4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G7P4_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.800e-41
Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query:  382 AEDGVLSKAAFDRCIRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLCAGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSS-LSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPWLELLDMGKWV 903
            ++ GV +K+ FD   R +V    +D  E+ + S LL S+FFSFDR   SS D  E+ +GFS+LC GSKS KLAFAF + D  G   L+RR LWR+ R+FLTAL A SF S +     E   AVD  A+WT+  +F +      NR  F+++A WY EGG+  +PWLELLD+ KWV
Sbjct:  102 SDGGVCAKSGFDESCRELVEMDGMDDTERNTCSTLLQSLFFSFDRAEQSSVDVCEIINGFSILCGGSKSTKLAFAFDVLDTKGKGALSRRSLWRFFRAFLTALCAFSFESGADRDPHETGVAVDAAAIWTATKVFEKKEVDRANRATFNDIAQWYGEGGYTKAPWLELLDLRKWV 276          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8197.17192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUX5_ECTSI2.060e-19693.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYX4_9PHAE5.600e-19193.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMH2_HETAK2.590e-7154.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CCD1_9STRA3.420e-7054.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1MRH8_9STRA8.310e-6348.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1G6W4_9STRA1.050e-5440.14Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2D6K2_9STRA1.090e-5338.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812UYR4_SYMMI6.610e-4336.36Calmodulin (Fragment) n=1 Tax=Symbiodinium microad... [more]
A0A7S0GD91_9STRA5.330e-4239.41Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A6U4G7P4_9STRA3.800e-4147.43Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8197contigL-elsbetiae_contig8197:4484..8563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score508.8
Seed ortholog evalue1.6e-141
Seed eggNOG ortholog2880.D7FUX5
Hectar predicted targeting categoryother localisation
EggNOG OGs2CU92@1,2RK0N@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_008550.1
Exons6
Model size1175
Cds size843
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8197.17192.1prot_L-elsbetiae_contig8197.17192.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8197 4693..8440 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816903.2070649-UTR-L-elsbetiae_contig8197:4483..46921622816903.2070649-UTR-L-elsbetiae_contig8197:4483..4692Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8197 4484..4692 -
1691683900.0570562-UTR-L-elsbetiae_contig8197:4483..46921691683900.0570562-UTR-L-elsbetiae_contig8197:4483..4692Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8197 4484..4692 -
1622816903.2984169-UTR-L-elsbetiae_contig8197:8440..85631622816903.2984169-UTR-L-elsbetiae_contig8197:8440..8563Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8197 8441..8563 -
1691683900.1270242-UTR-L-elsbetiae_contig8197:8440..85631691683900.1270242-UTR-L-elsbetiae_contig8197:8440..8563Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8197 8441..8563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816903.2227492-CDS-L-elsbetiae_contig8197:4692..48191622816903.2227492-CDS-L-elsbetiae_contig8197:4692..4819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 4693..4819 -
1691683900.0682962-CDS-L-elsbetiae_contig8197:4692..48191691683900.0682962-CDS-L-elsbetiae_contig8197:4692..4819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 4693..4819 -
1622816903.2338655-CDS-L-elsbetiae_contig8197:5451..57051622816903.2338655-CDS-L-elsbetiae_contig8197:5451..5705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 5452..5705 -
1691683900.0778635-CDS-L-elsbetiae_contig8197:5451..57051691683900.0778635-CDS-L-elsbetiae_contig8197:5451..5705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 5452..5705 -
1622816903.2470484-CDS-L-elsbetiae_contig8197:6145..62061622816903.2470484-CDS-L-elsbetiae_contig8197:6145..6206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 6146..6206 -
1691683900.0874233-CDS-L-elsbetiae_contig8197:6145..62061691683900.0874233-CDS-L-elsbetiae_contig8197:6145..6206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 6146..6206 -
1622816903.2623754-CDS-L-elsbetiae_contig8197:6506..66731622816903.2623754-CDS-L-elsbetiae_contig8197:6506..6673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 6507..6673 -
1691683900.0972269-CDS-L-elsbetiae_contig8197:6506..66731691683900.0972269-CDS-L-elsbetiae_contig8197:6506..6673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 6507..6673 -
1622816903.2762768-CDS-L-elsbetiae_contig8197:7112..73231622816903.2762768-CDS-L-elsbetiae_contig8197:7112..7323Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 7113..7323 -
1691683900.106601-CDS-L-elsbetiae_contig8197:7112..73231691683900.106601-CDS-L-elsbetiae_contig8197:7112..7323Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 7113..7323 -
1622816903.2877138-CDS-L-elsbetiae_contig8197:8417..84401622816903.2877138-CDS-L-elsbetiae_contig8197:8417..8440Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 8418..8440 -
1691683900.1161144-CDS-L-elsbetiae_contig8197:8417..84401691683900.1161144-CDS-L-elsbetiae_contig8197:8417..8440Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8197 8418..8440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8197.17192.1

>prot_L-elsbetiae_contig8197.17192.1 ID=prot_L-elsbetiae_contig8197.17192.1|Name=mRNA_L-elsbetiae_contig8197.17192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp
MELVDLSKWVPGVGALRPVMEGPLGNGGLEMDNQKKPRFCFQISESANPV
HLVISDDDANAVLDLVNKTGLCDREPADVCGTLVSVAEDGVLSKAAFDRC
IRGMVPASLLDTEEKTSFSVLLSSIFFSFDRDNSSSADAIELASGFSLLC
AGSKSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLS
AEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEVAAWYTEGGFRVSPW
LELLDMGKWVVPTTPFPPAAVPAAGAAGAE*
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mRNA from alignment at L-elsbetiae_contig8197:4484..8563-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8197.17192.1 ID=mRNA_L-elsbetiae_contig8197.17192.1|Name=mRNA_L-elsbetiae_contig8197.17192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4080bp|location=Sequence derived from alignment at L-elsbetiae_contig8197:4484..8563- (Laminarionema elsbetiae ELsaHSoW15)
GCGGAATTCACCCTGGAGGCGTTATTCGAGGACCCGGAGTCGGTGTACCG AGGGAGGGCGGGATTGACGTTCGAGGAGTTCGGGTTGTGGTACAATGAGG GGGGCTTCAAGAGCGTGCCGTGGATGGAGCTAGTCGACCTTTCCAAGTGA GCTTTTGTAGCTGAGCGGAGCTGTGCCGTGATGGTTGTTGTGGAATGATT GGTTGTATATGTATACTGCTGTACGTATGTAGTGTGTCTTTAACGGTTTC GCATTGAACGGTTTCGTATTTGCATTGACGGTTTCGGGCTGGTCCGCCTT TCCAAGTGAGCTGAGTGGAGCTGTGACGGCTTGTGACGATTTGTTGTATG TTTTTTCACGGTTTCGTCTTGTGTAGTTTGCTTATATTTAAACGGTTTCG TGCTTTTTTTTTATTGATCGTCGTATTTATCCGATTTGGTGTTAAACGAG TTCATGTTTTTTATTGATTTGCCTTGTAGTACGTAGATATGTATGTGAGT GTTGTCAAGGGTGGGGTTGATCATGATCAGTTCATCCCCAAAGAAGCTTC TCAGCTGAGAATCTTATTTTGGAGGGGGGGGGGGGGTCAATAATATCGAA AAAAGAGACAGGAGCCAAGGCACGTACAACATGCGAAGGGGTCTTCCTTA TAATGGGGTTAACTGGTTCTGGTTCTAACCAATAAATAGCCCGAGAAACC AGAACCAGAACCGGCGGTTGGAGGCTTGGGACTTGGGAGGCGGCCGCAAA TACCCTTCGAAAATAAATGGGGTGCCCGTGGTTCAATTTTAATATTGTAA TTGCCGTTGTTTTTTTGCGTTTTATCGTTTCGTTTTTGTTACCCTAAGCC CTAAGCCCTAACCCTAACCCCAACTATGACTGAGCACCTAGAAGGGCTGG GGTTAAGTTCTAGGCCACAGGGCGTTGGTTAGGTGCTTGGTTGGAGGGCG GGAGTAGGGCTAGGCCGCGGCTGAACGGCACTGTCAACAAATGTGCGCCC GTCACGGAACCACGTCGCTGGGGTGTCTGTCTGTCTGTCTGTCTGTGCAC AGCAGTCAATATCCCGGAAGTACACAAGATCGCTTCGCGCGTTTAGTGGC CCGTGCTGCACGTCTTAGACTCGACGCTACCCTTCCCCTGTCTCTGTGGC TGAACGTTAGTCACGCGTCTACCTCCAACCAAGTTTATTTCGTGAACGAG ACAAGCCACTAATAAACCAAAACAACAACAACAACAACAGGTGGGTTCCC GGGGTAGGCGCGCTCCGACCAGTGATGGAGGGGCCGTTGGGCAACGGCGG GTTGGAGATGGACAACCAGAAGAAGCCGAGGTTCTGCTTCCAGATCTCCG AGTCCGCCAACCCGGTGCACCTGGTGATCTCCGACGACGACGCGAACGCC GTCCTGGACTTGGTCAACAAGACCGGCCTCTGCGACCGCGAGCCTGCTGA CGTGAGCCGGCCTGCAGCGTTCGGCCTGGGGTACTAACTAAATAGCGGTG TAGTGTAGTGCGGCGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTCT AGGTATTCACAACAGCAGTCAGTCCCCCTTGGGAAGACGGCTCTGTCTGC GATTATCGGTGGCCACGGCCGGGGTATGTAGATGGAGCATTGGACAGCGG GGTGTTTTGGTTCGGATCACCGCTTCGATCCGCGAATACGTATCATTCTG ATCTAGGTACCTACTTCCTCTCTCTGGTCGCGTCGCGCTTTTTTTTGTGG GGTGTTTTATGGCTTCGTGGTTGCGACGATGACGCCGATAATGACGATGA CGAACAAAACACAACGTCCGACTGCTAACGGGACTGTCAGGTGTGCGGCA CCCTCGTGTCGGTGGCGGAGGACGGGGTGCTGAGCAAGGCGGCGTTCGAC CGGTGCATCAGGGGCATGGTGCCGGCCTCCCTGCTGGACACGGAGGAGAA GACCTCCTTCTCGGTCCTCCTCAGCAGCATCTTCTTCAGCTTCGACCGCG ACAACAGGTGCGTGCATAGGAGTGGGTGGTGTGAGGCAACTGGTGTTACG CAATGGTATTTATGTAGAAGTATGTGTTAATAGGATGTTGTTGGCGTGAC GCTGAACTTCACTTGCTCCTTTTTTTGGCGCAACGAGTGGAAATTTAGCA GCGTTGAAGAAACACGGGGAGTTCCTCTTTTTCTTATTTTCAGGCCCTTC TTCGCCGCAACGCTCACGCCCCTCCTCCCCCTCCCCCTCCCCCTCCTCCC CCTCCCCCTCCCGAACGGCTTTACTCTTCTGTGCGCGCTTGATTTTTGTT TTCACAGCTCCTCAGCCGATGCGATTGAGCTGGCATCAGGATTCTCGCTT CTGTGCGCCGGGTCAAAGGTGAGGATGAGTTTTGATGCGGGGACCGACGA GACAGGGTGTTTTCTTTCGTCATGTGCTGTCGCCGGTTGTCCGCCTTTCC TGGCTCGCCTCTGCCTGCCTATTGCAGGCCGTCGCGTATTTGCTAGAAGT ATTTTTTTGGCTCGTTACTCGGCACAGCCGTTTTTGTGTTTAGATTCGAT GTTCGGGCGCGATGTTGCCTCGGGAGATGTAAAACAGAAGTCGCATCGAT GCTTTACCTAGTTTATATTAAAAACAAAAATGTGAAAAGACAACAGCATT ATTACTATGGGGGTACTACTACACACACGCTACACACACGCATTTAGATA CGCTTCTTTGGCTGGCGCCCACCAGATAAGACCACTCACCTTGCTCTCTT CTGGCGCATCTTGACTGCACCCACACCCTGTTCGGCGGGGCGCCGCGCGG CGCGGCAGTCGGCTAAGCTGGCCTTCGCGTTCGGGCTGCACGACGAAGAC GGCGACGAGCGCCTGACGCGGCGGGGGCTGTGGCGCTACACGCGCTCCTT CCTGACCGCCCTCATGGCGCTGAGCTTCGCGTCGTCCAGCCTCTCAGCGG AGGAGCTAACCCGGGCGGTGGACGACGGGGCCGTGTGGACGAGCGCGGCG ATCTTCGCCGAGACCGCCACGCAGACGCCCAACCGGATCGGGTTCGACGA GGTCGCCGCCTGGTGAGAGGAAGGAGGCAGAAATTGGAAAAAAAAAATAG GGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGCAGGGAGAGGGGG GGGGGGGTGAGNNNNNNNNNNCATCCGCAGCGGAGGGGGCGAGAGTAGGC CCGGCGGGGGGGGAGAAGGGAAAAAAAAAAAAAAAAAAAAAAAGGGGGGG GGGGGGGGGGGGGAGAGGGAGAGAGAGCGACGGGCAGACATACTGAGAGG CAGATGAAGAGAGAGGCGGTGAGGCAGAGAGACAGAGAGAGAACGTGAGA GGGAAACTAGAGGAGTCGTTTTTTAATTGTCTTTTTTTCAGGGGTCTGTC TCACGTACTTGGGCGTGTTCCTTCTCGCCTTTGGTTCATGCAGACTCTTT AGAAGTTTAACCGGAAATCTACAAAACGGGGATGCCCACGTACAAGTACA TGGTAGTCGACATATAGATCTATATCTTGTGTTGCGGCAGTTTCAAACAA AAGTTGAACCTGCCTTGGTAATGGAGATGGTGATGTGGTGATGTGGTGAT GTGATGCGAATAAACTGCTGCTGTTTTGGCAACCGACCCCACCCCCACCC CGTCAAATACCAATGCCGCCGACACCCCCCCCCCCCCCCCACAGGTACAC GGAGGGAGGATTCCGCGTAAGCCCCTGGCTGGAGCTGCTGGACATGGGCA AGTGGGTGGTCCCAACGACTCCTTTCCCTCCAGCGGCTGTCCCCGCGGCG GGCGCGGCGGGCGCAGAGTAAAGCATGGGCTGACCCACCCGGCTGTCATT TGCCCGGGAGCGAGAGACAGGCACGCGCGTACATAGCGCGAATTCCTACC CCGCGTAATTTTAAGGGGTTTTGATCATTTTCTCCTCCTTTCAAACGACC TTGCCGGTAACGCACCCCGTAGCGATCTTGCGATCCTTCTGGCGGAGGGG GGTAGAGGGAGAGGGAGAACAAGCGGGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8197:4484..8563-

>mRNA_L-elsbetiae_contig8197.17192.1 ID=mRNA_L-elsbetiae_contig8197.17192.1|Name=mRNA_L-elsbetiae_contig8197.17192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1686bp|location=Sequence derived from alignment at L-elsbetiae_contig8197:4484..8563- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCTAGTCGACCTTTCCAAATGGAGCTAGTCGACCTTTCCAAGTGG
GTTCCCGGGGTAGGCGCGCTCCGACCAGTGATGGAGGGGCCGTTGGGCAA
CGGCGGGTTGGAGATGGACAACCAGAAGAAGCCGAGGTTCTGCTTCCAGA
TCTCCGAGTCCGCCAACCCGGTGCACCTGGTGATCTCCGACGACGACGCG
AACGCCGTCCTGGACTTGGTCAACAAGACCGGCCTCTGCGACCGCGAGCC
TGCTGACGTGGGTTCCCGGGGTAGGCGCGCTCCGACCAGTGATGGAGGGG
CCGTTGGGCAACGGCGGGTTGGAGATGGACAACCAGAAGAAGCCGAGGTT
CTGCTTCCAGATCTCCGAGTCCGCCAACCCGGTGCACCTGGTGATCTCCG
ACGACGACGCGAACGCCGTCCTGGACTTGGTCAACAAGACCGGCCTCTGC
GACCGCGAGCCTGCTGACGTGTGCGGCACCCTCGTGTCGGTGGCGGAGGA
CGGGGTGCTGAGCAAGGCGGCGTTCGACCGGTGCATCAGGGGCATGGTGC
CGGCCTCCCTGCTGGACACGGAGGAGAAGACCTCCTTCTCGGTCCTCCTC
AGCAGCATCTTCTTCAGCTTCGACCGCGACAACAGGTGTGCGGCACCCTC
GTGTCGGTGGCGGAGGACGGGGTGCTGAGCAAGGCGGCGTTCGACCGGTG
CATCAGGGGCATGGTGCCGGCCTCCCTGCTGGACACGGAGGAGAAGACCT
CCTTCTCGGTCCTCCTCAGCAGCATCTTCTTCAGCTTCGACCGCGACAAC
AGCTCCTCAGCCGATGCGATTGAGCTGGCATCAGGATTCTCGCTTCTGTG
CGCCGGGTCAAAGCTCCTCAGCCGATGCGATTGAGCTGGCATCAGGATTC
TCGCTTCTGTGCGCCGGGTCAAAGTCGGCTAAGCTGGCCTTCGCGTTCGG
GCTGCACGACGAAGACGGCGACGAGCGCCTGACGCGGCGGGGGCTGTGGC
GCTACACGCGCTCCTTCCTGACCGCCCTCATGGCGCTGAGCTTCGCGTCG
TCCAGCCTCTCAGCGGAGGAGCTAACCCGGGCGGTGGACGACGGGGCCGT
GTGGACGAGCGCGGCGATCTTCGCCGAGACCGCCACGCAGACGCCCAACC
GGATCGGGTTCGACGAGGTCGCCGCCTGTCGGCTAAGCTGGCCTTCGCGT
TCGGGCTGCACGACGAAGACGGCGACGAGCGCCTGACGCGGCGGGGGCTG
TGGCGCTACACGCGCTCCTTCCTGACCGCCCTCATGGCGCTGAGCTTCGC
GTCGTCCAGCCTCTCAGCGGAGGAGCTAACCCGGGCGGTGGACGACGGGG
CCGTGTGGACGAGCGCGGCGATCTTCGCCGAGACCGCCACGCAGACGCCC
AACCGGATCGGGTTCGACGAGGTCGCCGCCTGGTACACGGAGGGAGGATT
CCGCGTAAGCCCCTGGCTGGAGCTGCTGGACATGGGCAAGTGGGTGGTCC
CAACGACTCCTTTCCCTCCAGCGGCTGTCCCCGCGGCGGGCGCGGCGGGC
GCAGAGTAAGTACACGGAGGGAGGATTCCGCGTAAGCCCCTGGCTGGAGC
TGCTGGACATGGGCAAGTGGGTGGTCCCAACGACTCCTTTCCCTCCAGCG
GCTGTCCCCGCGGCGGGCGCGGCGGGCGCAGAGTAA
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