mRNA_L-elsbetiae_contig8190.17184.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 5.090e-118 Identity = 201/374 (53.74%), Postives = 263/374 (70.32%), Query Frame = 1 Query: 40 QVETPAG-LGMRMICPSCRTNKFVLPPGAKNNGFPSMFSQKVRVVHDVDGVVVPLAGKYRSKNPECVLVRASARSKAVKEEKEGGQKATDVVGDDAAVSSRCPDGVSFTTVDERYMKILPPAVREQLPYHFFKQGATSLKLLDMVRATDGDMQGLCSIFYRILLARDQGQGIRDCNRYVRFVKVEQANESKSRVDGGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNMLRELLGLRGGEILRTDTSFRVAGKTLLAAKAIFSMLGEEGKIDKY*AVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDHFPALKRAPLADAFHSIQTLTGATTTKDHPHKAHYSKEMGG 1158 +V+T G +G+RMICPSC TN+FV PG NGFPS+ SQK+RV HD+ GVVV + GKYR KNP C L SAR A K EK GG KA+++V DDAAV+S C +GV+F T+D RYM++LP AV +LPY FFKQ TS +LLDMV AT+GD G F+R+L+ARDQGQ +RD RY+RF + EQA E +SR+DG FT WP W+ N TL S PSVAVLN I++ H++++D+MLREL+ GE + +D +FR AGK + A+ ++ ++GE+ KI Y AVKSES+EE LL QRYAD RR T + YDDRCC +D TK++ FP ++RAPLAD+FH+ Q L GATT+K H + Y++ +GG Sbjct: 163 EVKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVHVFGKYRCKNPACALNVRSARKSAEKAEKNGGPKASEIVWDDAAVTSHCKNGVAFNTMDTRYMQLLPAAVVAKLPYRFFKQNITSERLLDMVSATEGDTPG----FHRLLVARDQGQELRDMQRYIRFAEEEQARERRSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRGCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGG 532
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 2.060e-116 Identity = 202/374 (54.01%), Postives = 264/374 (70.59%), Query Frame = 1 Query: 40 QVETPAG-LGMRMICPSCRTNKFVLPPGAKNNGFPSMFSQKVRVVHDVDGVVVPLAGKYRSKNPECVLVRASARSKAVKEEKEGGQKATDVVGDDAAVSSRCPDGVSFTTVDERYMKILPPAVREQLPYHFFKQGATSLKLLDMVRATDGDMQGLCSIFYRILLARDQGQGIRDCNRYVRFVKVEQANESKSRVDGGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNMLRELLGLRGGEILRTDTSFRVAGKTLLAAKAIFSMLGEEGKIDKY*AVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDHFPALKRAPLADAFHSIQTLTGATTTKDHPHKAHYSKEMGG 1158 +V+T G +G+RMICPSC TN+FV PG NGFPS+ SQK+RV HD+ GVVVP+ GKYR KNP C L SAR A K EK GG KA+++V DDAAV+S C +GVSF T+D RYM++LP AV +LPY FFKQ TS +LLDMV AT+GD G F+R+L+AR+QGQ +RD RY+RF + EQA E +SR+DG FT WP W+ N TL S PSVAVLN I++ H++++D+MLREL+ GE + +D +FR AGK + A+ ++ ++GE+ KI Y AVKSES+EE LL QRYAD RR T + YDDRCC +D TK++ FP ++RAPLAD+FH+ Q L GATT+K H + Y++ +GG Sbjct: 265 EVKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVPVFGKYRCKNPACALNVRSARQSAEKAEKNGGPKASEIVWDDAAVTSHCKNGVSFNTMDTRYMQLLPAAVVAKLPYRFFKQNGTSERLLDMVSATEGDTPG----FHRLLVAREQGQELRDMQRYIRFAEEEQARERRSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMNEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRVCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGG 634
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5JZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ63_9PHAE) HSP 1 Score: 144 bits (364), Expect = 4.890e-33 Identity = 117/382 (30.63%), Postives = 182/382 (47.64%), Query Frame = 1 Query: 43 VETPAGL-GMRMICPSCRTNKFVLPPGAKNNGFPSMFSQKVRVVHDVDGVVVPLAGKYRSKNPECVLVRASARSKAVKEEKEGGQKATDVVG----DDAAVSSRCPDGVSFTTVDERYMKILPPAVREQLPYHFF--KQGATSLKLLDMVRATDGDMQGLCSIFYRILLARDQGQGIRDCNRYVRFVKVEQANESKSRVDGGFTVWPAWKHNVQTLTSPPSVAVLNRIDRY----GHVENKDNMLRELLGLRGGEILRTDTSFRVAGKTLLAAKAIFSMLGEEGKIDKY*AVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQDHFPALKRAPLADAFHSIQTLTGATTTKDHPHKAHYSKEMG 1155 V TP G G+RMICP C++N V PPG +GFP+ AG +++ + V + + + +EGGQ+ V+ D+A + P+G S TT+D+R+ + +RE Y F K + L + + G + SI ++L G D VR V+ F V + + + L + + D H ++K++M RE+ G+ L D ++R+ + + + +F +LGE+ K+ AV+SE KEE LL++RYA+ RR + T L + FYDD CC A D TK W+ D F + R LAD+FH QTL GATT+K+HP KA ++ +G Sbjct: 91 VTTPGGAKGVRMICPGCKSNSEVKPPGVSGHGFPN-------------------AGAHKASSTFAVFLHGLRVPSRLGKCQEGGQQKRVVIANDGWDEATIREHGPNGASLTTMDDRHGE-QGRELREMHRYIRFAAKHRSAEHALWPGWKFSRGTLISTPSI---VVLNTIYKAGHDD----VRGGSVDT-----------FLVLVRFLVSARVLFRRVQILLCRHTDHNVVFCRHPQDKEHMQREIHSQYWGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAGGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWFYDDLCCRGADDVTKGWILDIFEGVMRRALADSFHFGQTLVGATTSKNHPRKAVFAAGVG 434
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5KMP1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP1_9PHAE) HSP 1 Score: 140 bits (353), Expect = 3.460e-31 Identity = 168/482 (34.85%), Postives = 220/482 (45.64%), Query Frame = 3 Query: 1632 YFDLGRGVKTGLHRYSTKGGTGIIEAFHRSVNQLVASVQRLSPALCDQRVLPRVHSFNFRRDQKLNKTSKPSTLFVWGERDVNDASRGCLVAEPFPKAGP----------------RLDVSEEDLRREKMGFEY-----AQGLEADRLETCRLAAARNAGGERPQSCINSNPPR---PVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXAAPRPSA-----VSXXXXXXXXXXXXXXXXXXXXSTRGGXXXXXXXAPQNVGGARVRHGRALTVESPAAVIPTTAAEVQCWANAMATATSSYRSTSQVLPQAVQLYNTQYYMGAFMASGAGAAQGGCRGPTSLGQVQKRSRGVAQATLGANLAAQAAFERG-----------PXXXXXXXXXXXRNRKYARD---AVSKVAAGVPLTLGH-DGISDTLAVCYLKSMGLSTSGRKADKSDRLRKYFAENGVTTFTP 2945 Y GRG KT L R+S KGGTG E FH +N+LVA V R+ CD R+L RV N D+KL TSK ST + W ER VN A+ G L + PFPKA P R + +DL E MGFE+ A G R+ A R R + + P XXXXXXXXXXXXXXXXXXXXX X +P PS+ V X +T G A N GGAR H + T+E +V PTT E+ +A +ATA + R +V+ + +LYNT+++ A RGPTS +++K+S A A ++A A + P XXXXXX R R D AV++VA VPLT+ + + D +A+ YL M TSGR A K +RL+ YF + +T++TP Sbjct: 54 YIPRGRGPKTNLMRWSKKGGTGKNENFHGGINRLVAGVARIGVEACDARLLQRVCRHNLDMDRKLGNTSKQSTRWPWRERVVNKAASGILASLPFPKAPPDPKHDVCDANSLLFVCRCQIPTKDL--EPMGFEFHTARKAAGRREAMNAATRIVAERRGNNPRSSPSMTAGSAAREGPETAPLPLPTAGGRIGTAAAGAAGPAEXXXXXXXXXXXXXXXXXXXXXXXDSPSPSSTQEGRVGTAVPGXGAVLGAGAAPLPTMTTTGA-------AFANYGGARKLHSKRPTIEGQKSVTPTTDGELDAFARCLATARAQGRG--EVMEETARLYNTEFFTQQLDRD----APIILRGPTSAQKLRKKSTTTATAKRARQVSADFAAVQSAGRTASSCSTSPSNXXXXXXRSKRRRDVRPDRENAVARVANRVPLTIEEIETLPDAVAIPYLSDMDQPTSGRVAAKRERLKSYFRNHNLTSYTP 520
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5L4Z6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z6_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.730e-31 Identity = 173/495 (34.95%), Postives = 228/495 (46.06%), Query Frame = 3 Query: 1632 YFDLGRGVKTGLHRYSTKGGTGIIEAFHRSVNQLVASVQRLSPALCDQRVLPRVHSFNFRRDQKLNKTSKPSTLFVWGERDVNDASRGCLVAEPFPKAGPRLDVSEEDLRREKMGFEYAQGLEADRLETCRLAAARN------------------AG------------GERPQSCINSNPPRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXAAPRPSAVSXXXXXXXXXXXXXXXXXXXXSTRGGXXXXXXXAPQ-----NVGGARVRHGRALTVESPAAVIPTTAAEVQCWANAMATATSSYRSTSQVLPQAVQLYNTQYYMGAFMASGAGAAQGGCRGPTSLGQVQKRSRGVAQA----TLGANLAAQAAFER----GPXXXXXXXXXXXRNRKYARDAVS-KVAAGVPLTLGH-DGISDTLAVCYLKSMGLSTSGRKADKSDRLRKYFAENGVTTF----TPPVTDAAAA 2969 Y LGRG KTGL R+S KGGTG E FH +N+LV V RL CD R+L R+H N D+KL +TSK STL+VW ER N A+ L + PFP+AG V+ ED E MGFEYA+ A+ L + AAA + AG G +C P P+ XXXXXXXXXXXXXX X XXXXXXXX ++R A Q N GG R R T+E A+ PT+ AE++ +A +A AT SQV+ +A + YN +YY A G A R PT++ + + RS+ A+A A+LAA R XXXXXXXXX + + RD S +VA+GVPL L ++D A+ Y+K++GL +G A K +L +F ++ + + P T A A Sbjct: 96 YIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVAAEDF--EPMGFEYAEQRRANALTNAKTAAANSLVLTRTSLPSTTAGDTSRAGAAAVGXXXXXXAGTAVGACARVMP-LPLTNRGGRPGAAALMPSTIATGSSAGAGAVPPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGASGGGVMGGATSRTYRSNAGEAAAQDISRGNYGGGRRLPSRHPTLERVKALTPTSDAELEAFATCLAEATMVCDGKSQVMTEATKRYNARYYRQAL----TGGAPKLIRAPTTVEKARNRSKIAAKAGRDRDAAADLAAVNEISRVRTSSAXXXXXXXXXASKRARGDRDRASERVASGVPLKLEQISTLTDAAAIAYMKAIGLKLTGNVALKRKKLSDFFESKNISEYRYSPSRPATSPAPA 583
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.830e-25 Identity = 67/137 (48.91%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 1632 YFDLGRGVKTGLHRYSTKGGTGIIEAFHRSVNQLVASVQRLSPALCDQRVLPRVHSFNFRRDQKLNKTSKPSTLFVWGERDVNDASRGCLVAEPFPKAGPRLDVSEEDLRREKMGFEYAQGLEADRLETCRLAAARN 2042 Y LGRG KTGL R+S KGGTG E FH +N+LV V RL CD R+L R+H N D+KL +TSK STL+VW ER N A+ L + PFP+AG V+ ED E +GFEYA+ A+ L + AAA + Sbjct: 1312 YIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVAAEDF--EPIGFEYAEQRRANALTHAKTAAANS 1446
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5KAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH5_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.530e-23 Identity = 61/124 (49.19%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 1632 YFDLGRGVKTGLHRYSTKGGTGIIEAFHRSVNQLVASVQRLSPALCDQRVLPRVHSFNFRRDQKLNKTSKPSTLFVWGERDVNDASRGCLVAEPFPKAGPRLDVSEEDLRREKMGFEYAQGLEA 2003 Y LGRG KTGL R+S KGGTG E FH +N+LV V RL CD R+L R+H N D+KL +TSK STL+VW ER N A+ L + PFP+AG V+ ED E MG G A Sbjct: 6 YIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVAAEDF--EPMGDTSRAGAAA 127
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5KXX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX1_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.230e-20 Identity = 80/267 (29.96%), Postives = 120/267 (44.94%), Query Frame = 1 Query: 232 CVLVRASARSKAVKEEKEGGQKATDVVGDDAAVSSRCPDGVSFTTVDERYMKILPPAVREQLPYHFFKQGATSLKLLDMVRATDGDMQGLCSIFYRILLARDQGQGIRDCNRYVRFVKVEQANESKSRVDGGFTVWPAWKHNVQTLTSPPSVAVLNRIDRYGHVENKDNMLRELLGLRGGEILRTDTSFRVAGKTLLAAKAIFSMLGEEGKIDKY*AVKSESKEETQLLIQRYADTRRASNTHLDVCAFYDDRCCNKARDPTKHWLQ 1032 C LV SA+ A K++ D D+A + CP+G SFTT+D+RYM++ P + +LP+ +F+Q TS LLD VRAT+GD+Q K ES + G + RI H + + G+ L D ++R+ + + + +F +LGE+ K+ Y AV+SE KEE LL++RYA+ RR + T L + YD CC A D TK W++ Sbjct: 160 CPLVLESAKKAANKKK----VVIADDGWDEATIREHCPNGGSFTTMDDRYMQLPPEEIVSRLPFRYFRQNGTSETLLDQVRATEGDLQD----------------------------KEHMQRESTRSMGGS--------------------SCAXRI----HSQYR------------GQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAYGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWLYDYLCCRGADDVTKGWIR 358
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 4.180e-18 Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 40 QVETPAGLGMRMICPSCRTNKFVLPPGAKNNGFPSMFSQKVRVVHDVDGVVVPLAGKYRSKNPECVLVRASARSKAVKEEKEGGQKATDVVGDDA----AVSSRCPDGVSFTTVDE-RYMKILPPAVREQLPYHFFKQGATSL 453 +V T G G+RMICP C++NKFV PPG +GFP M K+RV HDV GVVVP+ G+Y P C L SA+ A +++ VV DD + CP+GVSF T+DE + +I A R P+ +K +S+ Sbjct: 179 KVNTRGGAGVRMICPGCKSNKFVKPPGVSGHGFPCM-GAKLRVAHDVAGVVVPVTGRYACLGPGCPLRLESAKRSAARKKS--------VVADDGWDEDTIKKHCPNGVSFNTMDESKQQEIERKAGRGPTPWPPWKFNRSSI 312
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Match: A0A6H5KRD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD1_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 3.990e-16 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 157 KVRVVHDVDGVVVPLAGKYRSKNPECVLVRASARSKAVKEEKEGGQKATDVVGDDAAVSSRCPDGVSFTTVDERYMKILPPAVREQLPYHFFKQGATSLKLLDMVRATDGDMQ 495 ++R V DV VVVPLAG+Y C LV SA+ A K++ D D+A + CP+G SFTT+D+RYM++ P + LP+ +F+Q TS LLD VRAT+GD+Q Sbjct: 188 QIRAVPDVGRVVVPLAGRYSCTASGCPLVLESAKKAANKKK----VVIADDGWDEATIREHCPNGGSFTTMDDRYMQLPPEEIVSPLPFRYFRQNGTSETLLDQVRATEGDLQ 296 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8190.17184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8190.17184.1 >prot_L-elsbetiae_contig8190.17184.1 ID=prot_L-elsbetiae_contig8190.17184.1|Name=mRNA_L-elsbetiae_contig8190.17184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=513bp MKCEFACHKLTTAPTGRADSAALGTSSMATPFFFFCGLISRVCFTYFDLGback to top mRNA from alignment at L-elsbetiae_contig8190:3764..8556- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8190.17184.1 ID=mRNA_L-elsbetiae_contig8190.17184.1|Name=mRNA_L-elsbetiae_contig8190.17184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4793bp|location=Sequence derived from alignment at L-elsbetiae_contig8190:3764..8556- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8190:3764..8556- >mRNA_L-elsbetiae_contig8190.17184.1 ID=mRNA_L-elsbetiae_contig8190.17184.1|Name=mRNA_L-elsbetiae_contig8190.17184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3078bp|location=Sequence derived from alignment at L-elsbetiae_contig8190:3764..8556- (Laminarionema elsbetiae ELsaHSoW15)back to top |