mRNA_L-elsbetiae_contig8189.17181.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8189.17181.1
Unique NamemRNA_L-elsbetiae_contig8189.17181.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 1.570e-167
Identity = 246/268 (91.79%), Postives = 251/268 (93.66%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRGSGAEVVG KGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFT AREGAVGPSL VA EHCVRTRRLFRRIAEAAEEG GEEKSDGDTR FGRCA+MT AIL S QT+TDQQT RKRRRG DD+ADSKKTWYAPPGTALDELMLHLHLGGVAC G+LTSYS WDSLSLPAHGII+RTWCGASMGGLDPDSLECDEATRL ELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCW GPIVGAEDA GTTYG GDWQCDINGAHT
Sbjct:  328 SHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHT 595          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 1.320e-140
Identity = 221/268 (82.46%), Postives = 226/268 (84.33%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRGSGAEV GPK Q TSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVA EHC RTRRLFRR+AEAAEEG GEEKSDGDTRTFGRCA+MT AILA+ QTETDQQTTRKRRRGVDD+ADSK+TW                         LTSYS  DSLSLPAHGIIVRTW GASM GLDPDSLECDEATRL ELHGTLGRKLI GVMDFRVSSEYSPSLLALLEVCW GPI GAEDALGTTYG GDWQCDINGAHT
Sbjct:  309 SHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMTQAILATGQTETDQQTTRKRRRGVDDKADSKETW-------------------------LTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIELHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDALGTTYGPGDWQCDINGAHT 551          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 5.750e-107
Identity = 170/270 (62.96%), Postives = 198/270 (73.33%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETD--QQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRG+GA ++GP    T+L+P  LHVGVREGHVYRLVL+GPW DRF        G SLDVA +H VRT R FRRI+E   E    + +   T+TF   A++   I+A +QT  D  +Q   KR+ G   +    KTWYAPPGTALDELMLHLHL GV+C GKLT+YS WDSLSLPAHG+++RTWC ASMGGLDPD  E D+ATRL ELH  LG K  RGV+DFRVSS+YS SLLALLEVCW GPIVGAEDA G++YG  DWQCDINGAHT
Sbjct:  300 SHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRF--------GSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPVEKRKHGR--KVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHT 559          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 5.300e-105
Identity = 176/272 (64.71%), Postives = 203/272 (74.63%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSD-GDTRTFGRCANMTPAILASDQTETD---QQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRGSG  V+GP  + T LRPRALHVGVREGHVYRL LDGPW+DRF        G SLDVA EH V+T+R FRRIAEA EE    + +D G  +TF   A++   ++A +Q+E +   QQ  RK+R+    R++   TWYAPPGT LDELMLHLHL GV+C G+LTSYS WDSLSLPAHGI +RTWC ASMGGLDPD LE D+ATRL ELH  LG K   GV+DFRVSS+YS SLLALLEVCW GPIVGAE+  GT+YG  DWQCDINGAHT
Sbjct:  323 SHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRF--------GSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEFN-TWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHT 585          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 6.340e-105
Identity = 164/269 (60.97%), Postives = 193/269 (71.75%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDD-RADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRG+GA+V GP  + T+LRP  LHVGVREGHVYRLVL GPW++RF        G  +DV  E+ +RT R FRRIAE  EE    +++   T+TF   A++   ILA++QTE                +A    TWYAPPGTALDELMLHLHL GV+C+G+L++YS WDSLSLPAHGI +RTWC ASMGGLDPD  E D+ATRL ELH  LG K  RGV+DFRVSS+YS SLLALLEVCW GPIVGAED  G++YG  DWQCDINGAHT
Sbjct:  133 SHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXXXXKASEPTTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHT 393          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D7G6J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J5_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 3.380e-104
Identity = 165/269 (61.34%), Postives = 195/269 (72.49%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVD-DRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRG+GA+V GP  + T+LRP  LHVGVREGHVYRLVL GPW++RF        G  +DV  E+ +RT R FRRIAE  EE    +++   T+TF   A++   ILA++QTE               ++A   KTWYAPPGTALDELMLHLHL GV+C+G+L++YS WDSLSLPAHGI +RTWC ASMGGLDPD  E D+ATRL ELH  LG K  RGV+DFRVSS+YS SLLALLEVCW GPIVGAED  G++YG  DWQCDINGAHT
Sbjct:  133 SHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHT 393          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5JBP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP5_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 9.500e-101
Identity = 154/192 (80.21%), Postives = 160/192 (83.33%), Query Frame = -1
Query:  220 GSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSL 795
            GSGAEVVG K QTTSLRPRALHVGV EGHV RLVLDGPWKDR T AREGA                  FRRIAEAAEEGGGEE+SDGDTRTFGRCA+MT AIL+S QTE DQQT RKRRRG DD+ADSKKTWYAPPGTALDELMLHLHLG VACTG+LTSYS WDSLSLPAHGII+RTWCGASMGGLDPD L
Sbjct:  153 GSGAEVVGAKDQTTSLRPRALHVGVCEGHVCRLVLDGPWKDRLTGAREGAA-----------------FRRIAEAAEEGGGEEESDGDTRTFGRCADMTEAILSSSQTEADQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGVVACTGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDVL 327          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 9.960e-101
Identity = 164/269 (60.97%), Postives = 195/269 (72.49%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVD-DRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRG+GA+V GP  + T+LRP  LHVGVREGHVYRLVL GPW++RF        G  +DV  E+ +RT R FRRIAE  EE    +++   T+TF   A++   ILA++QTE               ++A   KTWYAPPGTALD+LMLHLHL GV+C+G+L++YS WDSLSLPAHGI +RTWC ASMGGLDPD  E D+ATRL ELH  LG K  RGV+DFRVSS+YS SLLALLEVCW GPIVGAED  G++YG  DWQCDINGAHT
Sbjct:  133 SHRGTGADVAGPCDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDKLMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHT 393          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 2.080e-99
Identity = 171/271 (63.10%), Postives = 193/271 (71.22%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQT---ETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRG+GA ++GP    TSLRP  LHVGVREGHVYRLVL+G W+DRF        G SLDVA EH VRT R FRRI+E  EE    + +   T+TF   A++   I+A  QT      Q   +KR+ G   +    KTWYAPPGTALDELMLHLHL GV+C GKLT+YS WDSLSLPA GII+RTWC ASMG LDPD  E D+ATRL ELH  LG K  RGV+DFRVSS+YS SLLALL VCW GPIVGAEDA G+ YG  DWQCDINGAHT
Sbjct:  319 SHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRF--------GSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHT 579          
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 6.570e-97
Identity = 165/271 (60.89%), Postives = 191/271 (70.48%), Query Frame = -1
Query:    1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETD---QQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804
            SHRG GA  +GP    T+LRP  +HVGVREGHVYRLVL+GPW+DRF        G SLDVA EH VRT R FRRI+E  EE    + +    +TF   A++   I+A  QT  D   Q   ++R+ G   +    KTWYAPPGTALDELMLHLHL GV+C  +LT+YS WDSLSLPAHGII R+WC ASMGGLDPD  E D+ATRL ELH     K  RGV+DFRVSS+YS SL ALLEVCW GP+VGAEDA G++YG  DWQCDINGAHT
Sbjct:  386 SHRGPGANTLGPSDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRF--------GSSLDVAIEHRVRTYRKFRRISEMTEEEEEPDTTGFGAKTFSCVADIVSDIMAIKQTREDHNRQPVEKERKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCISRLTNYSHWDSLSLPAHGIITRSWCSASMGGLDPDDFEPDQATRLIELH-----KFCRGVLDFRVSSQYSKSLFALLEVCWRGPMVGAEDASGSSYGREDWQCDINGAHT 641          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFQ2_ECTSI1.570e-16791.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KTC4_9PHAE1.320e-14082.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMS8_9PHAE5.750e-10762.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM3_9PHAE5.300e-10564.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWV6_ECTSI6.340e-10560.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6J5_ECTSI3.380e-10461.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBP5_9PHAE9.500e-10180.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV89_ECTSI9.960e-10160.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCS9_9PHAE2.080e-9963.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2B8_9PHAE6.570e-9760.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8189contigL-elsbetiae_contig8189:827..1630 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size804
Cds size447
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816902.3976965-UTR-L-elsbetiae_contig8189:826..11831622816902.3976965-UTR-L-elsbetiae_contig8189:826..1183Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8189 827..1183 +
1691683899.4525049-UTR-L-elsbetiae_contig8189:826..11831691683899.4525049-UTR-L-elsbetiae_contig8189:826..1183Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8189 827..1183 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816902.4100726-CDS-L-elsbetiae_contig8189:1183..16301622816902.4100726-CDS-L-elsbetiae_contig8189:1183..1630Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8189 1184..1630 +
1691683899.46584-CDS-L-elsbetiae_contig8189:1183..16301691683899.46584-CDS-L-elsbetiae_contig8189:1183..1630Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8189 1184..1630 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8189.17181.1prot_L-elsbetiae_contig8189.17181.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8189 1184..1630 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8189.17181.1

>prot_L-elsbetiae_contig8189.17181.1 ID=prot_L-elsbetiae_contig8189.17181.1|Name=mRNA_L-elsbetiae_contig8189.17181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
MKHELVQSGTGRRVPGLLAVRPVVDSSPALTSGLLVRLRLVRGEDGRRHV
RATTKGSGVTIRFLLSTSLLGRLGNTAKETPRAHAVLERHIQRWTDRPLA
SASEAILPRAIEHQAVHVALANPDVKRSGTEARRLALGTDNLGPGAPV*
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mRNA from alignment at L-elsbetiae_contig8189:827..1630+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8189.17181.1 ID=mRNA_L-elsbetiae_contig8189.17181.1|Name=mRNA_L-elsbetiae_contig8189.17181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig8189:827..1630+ (Laminarionema elsbetiae ELsaHSoW15)
CGTGTGCGCCCCGTTGATGTCGCATTGCCAGTCCCCCGATCCATAGGTTG TGCCCAGCGCATCTTCTGCCCCCACGATAGGTCCCGTCCAACACACCTCG AGTAGCGCGAGAAGAGACGGGCTGTACTCACTCGAGACCCGAAAATCCAT CACACCACGAATGAGCTTGCGCCCCAGCGTGCCGTGCAGCTCGGTCAGAC GTGTAGCTTCGTCGCATTCGAGCGAATCCGGATCCAGTCCGCCCATACTC GCGCCGCACCAGGTTCGAACAATTATGCCGTGCGCCGGCAACGACAACGA ATCCCAGTCGCTGTAGCTGGTCAGCTTACCCGTGCAAGCCACGCCGCCGA GGTGGAGATGAAGCATGAGCTCGTCCAGAGCGGTACCGGGAGGCGCGTAC CAGGTCTTCTTGCTGTCCGCCCTGTCGTCGACTCCTCTCCTGCGCTTACG AGTGGTCTGCTGGTCCGTCTCCGTCTGGTCCGAGGCGAGGATGGCCGGCG TCATGTTCGCGCAACGACCAAAGGTTCTGGTGTCACCATCCGATTTCTCC TCTCCACCTCCCTCCTCGGCCGCCTCGGCAATACGGCGAAAGAGACGCCT CGTGCGCACGCAGTGCTCGAACGCCACATCCAGAGATGGACCGACCGCCC CCTCGCGAGCGCTAGTGAAGCGATCCTTCCAAGGGCCATCGAGCACCAGG CGGTACACGTGGCCCTCGCGAACCCCGACGTGAAGCGCTCGGGGACGGAG GCTCGTCGTCTGGCCCTTGGGACCGACAACCTCGGCCCCGGAGCCCCTGT GTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8189:827..1630+

>mRNA_L-elsbetiae_contig8189.17181.1 ID=mRNA_L-elsbetiae_contig8189.17181.1|Name=mRNA_L-elsbetiae_contig8189.17181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig8189:827..1630+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGCATGAGCTCGTCCAGAGCGGTACCGGGAGGCGCGTACCAGGTCT
TCTTGCTGTCCGCCCTGTCGTCGACTCCTCTCCTGCGCTTACGAGTGGTC
TGCTGGTCCGTCTCCGTCTGGTCCGAGGCGAGGATGGCCGGCGTCATGTT
CGCGCAACGACCAAAGGTTCTGGTGTCACCATCCGATTTCTCCTCTCCAC
CTCCCTCCTCGGCCGCCTCGGCAATACGGCGAAAGAGACGCCTCGTGCGC
ACGCAGTGCTCGAACGCCACATCCAGAGATGGACCGACCGCCCCCTCGCG
AGCGCTAGTGAAGCGATCCTTCCAAGGGCCATCGAGCACCAGGCGGTACA
CGTGGCCCTCGCGAACCCCGACGTGAAGCGCTCGGGGACGGAGGCTCGTC
GTCTGGCCCTTGGGACCGACAACCTCGGCCCCGGAGCCCCTGTGTGAATG
AAGCATGAGCTCGTCCAGAGCGGTACCGGGAGGCGCGTACCAGGTCTTCT
TGCTGTCCGCCCTGTCGTCGACTCCTCTCCTGCGCTTACGAGTGGTCTGC
TGGTCCGTCTCCGTCTGGTCCGAGGCGAGGATGGCCGGCGTCATGTTCGC
GCAACGACCAAAGGTTCTGGTGTCACCATCCGATTTCTCCTCTCCACCTC
CCTCCTCGGCCGCCTCGGCAATACGGCGAAAGAGACGCCTCGTGCGCACG
CAGTGCTCGAACGCCACATCCAGAGATGGACCGACCGCCCCCTCGCGAGC
GCTAGTGAAGCGATCCTTCCAAGGGCCATCGAGCACCAGGCGGTACACGT
GGCCCTCGCGAACCCCGACGTGAAGCGCTCGGGGACGGAGGCTCGTCGTC
TGGCCCTTGGGACCGACAACCTCGGCCCCGGAGCCCCTGTGTGA
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