mRNA_L-elsbetiae_contig8189.17181.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 509 bits (1312), Expect = 1.570e-167 Identity = 246/268 (91.79%), Postives = 251/268 (93.66%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRGSGAEVVG KGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFT AREGAVGPSL VA EHCVRTRRLFRRIAEAAEEG GEEKSDGDTR FGRCA+MT AIL S QT+TDQQT RKRRRG DD+ADSKKTWYAPPGTALDELMLHLHLGGVAC G+LTSYS WDSLSLPAHGII+RTWCGASMGGLDPDSLECDEATRL ELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCW GPIVGAEDA GTTYG GDWQCDINGAHT Sbjct: 328 SHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHT 595
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE) HSP 1 Score: 434 bits (1115), Expect = 1.320e-140 Identity = 221/268 (82.46%), Postives = 226/268 (84.33%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRGSGAEV GPK Q TSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVA EHC RTRRLFRR+AEAAEEG GEEKSDGDTRTFGRCA+MT AILA+ QTETDQQTTRKRRRGVDD+ADSK+TW LTSYS DSLSLPAHGIIVRTW GASM GLDPDSLECDEATRL ELHGTLGRKLI GVMDFRVSSEYSPSLLALLEVCW GPI GAEDALGTTYG GDWQCDINGAHT Sbjct: 309 SHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMTQAILATGQTETDQQTTRKRRRGVDDKADSKETW-------------------------LTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIELHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDALGTTYGPGDWQCDINGAHT 551
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 337 bits (864), Expect = 5.750e-107 Identity = 170/270 (62.96%), Postives = 198/270 (73.33%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETD--QQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRG+GA ++GP T+L+P LHVGVREGHVYRLVL+GPW DRF G SLDVA +H VRT R FRRI+E E + + T+TF A++ I+A +QT D +Q KR+ G + KTWYAPPGTALDELMLHLHL GV+C GKLT+YS WDSLSLPAHG+++RTWC ASMGGLDPD E D+ATRL ELH LG K RGV+DFRVSS+YS SLLALLEVCW GPIVGAEDA G++YG DWQCDINGAHT Sbjct: 300 SHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRF--------GSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPVEKRKHGR--KVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHT 559
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 342 bits (877), Expect = 5.300e-105 Identity = 176/272 (64.71%), Postives = 203/272 (74.63%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSD-GDTRTFGRCANMTPAILASDQTETD---QQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRGSG V+GP + T LRPRALHVGVREGHVYRL LDGPW+DRF G SLDVA EH V+T+R FRRIAEA EE + +D G +TF A++ ++A +Q+E + QQ RK+R+ R++ TWYAPPGT LDELMLHLHL GV+C G+LTSYS WDSLSLPAHGI +RTWC ASMGGLDPD LE D+ATRL ELH LG K GV+DFRVSS+YS SLLALLEVCW GPIVGAE+ GT+YG DWQCDINGAHT Sbjct: 323 SHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRF--------GSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEFN-TWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHT 585
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI) HSP 1 Score: 327 bits (839), Expect = 6.340e-105 Identity = 164/269 (60.97%), Postives = 193/269 (71.75%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDD-RADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRG+GA+V GP + T+LRP LHVGVREGHVYRLVL GPW++RF G +DV E+ +RT R FRRIAE EE +++ T+TF A++ ILA++QTE +A TWYAPPGTALDELMLHLHL GV+C+G+L++YS WDSLSLPAHGI +RTWC ASMGGLDPD E D+ATRL ELH LG K RGV+DFRVSS+YS SLLALLEVCW GPIVGAED G++YG DWQCDINGAHT Sbjct: 133 SHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXXXXKASEPTTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHT 393
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D7G6J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J5_ECTSI) HSP 1 Score: 331 bits (848), Expect = 3.380e-104 Identity = 165/269 (61.34%), Postives = 195/269 (72.49%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVD-DRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRG+GA+V GP + T+LRP LHVGVREGHVYRLVL GPW++RF G +DV E+ +RT R FRRIAE EE +++ T+TF A++ ILA++QTE ++A KTWYAPPGTALDELMLHLHL GV+C+G+L++YS WDSLSLPAHGI +RTWC ASMGGLDPD E D+ATRL ELH LG K RGV+DFRVSS+YS SLLALLEVCW GPIVGAED G++YG DWQCDINGAHT Sbjct: 133 SHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHT 393
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5JBP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP5_9PHAE) HSP 1 Score: 306 bits (783), Expect = 9.500e-101 Identity = 154/192 (80.21%), Postives = 160/192 (83.33%), Query Frame = -1 Query: 220 GSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSL 795 GSGAEVVG K QTTSLRPRALHVGV EGHV RLVLDGPWKDR T AREGA FRRIAEAAEEGGGEE+SDGDTRTFGRCA+MT AIL+S QTE DQQT RKRRRG DD+ADSKKTWYAPPGTALDELMLHLHLG VACTG+LTSYS WDSLSLPAHGII+RTWCGASMGGLDPD L Sbjct: 153 GSGAEVVGAKDQTTSLRPRALHVGVCEGHVCRLVLDGPWKDRLTGAREGAA-----------------FRRIAEAAEEGGGEEESDGDTRTFGRCADMTEAILSSSQTEADQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGVVACTGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDVL 327
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 328 bits (841), Expect = 9.960e-101 Identity = 164/269 (60.97%), Postives = 195/269 (72.49%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETDQQTTRKRRRGVD-DRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRG+GA+V GP + T+LRP LHVGVREGHVYRLVL GPW++RF G +DV E+ +RT R FRRIAE EE +++ T+TF A++ ILA++QTE ++A KTWYAPPGTALD+LMLHLHL GV+C+G+L++YS WDSLSLPAHGI +RTWC ASMGGLDPD E D+ATRL ELH LG K RGV+DFRVSS+YS SLLALLEVCW GPIVGAED G++YG DWQCDINGAHT Sbjct: 133 SHRGTGADVAGPCDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDKLMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHT 393
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 328 bits (841), Expect = 2.080e-99 Identity = 171/271 (63.10%), Postives = 193/271 (71.22%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQT---ETDQQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRG+GA ++GP TSLRP LHVGVREGHVYRLVL+G W+DRF G SLDVA EH VRT R FRRI+E EE + + T+TF A++ I+A QT Q +KR+ G + KTWYAPPGTALDELMLHLHL GV+C GKLT+YS WDSLSLPA GII+RTWC ASMG LDPD E D+ATRL ELH LG K RGV+DFRVSS+YS SLLALL VCW GPIVGAEDA G+ YG DWQCDINGAHT Sbjct: 319 SHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRF--------GSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHT 579
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 320 bits (820), Expect = 6.570e-97 Identity = 165/271 (60.89%), Postives = 191/271 (70.48%), Query Frame = -1 Query: 1 SHRGSGAEVVGPKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAFEHCVRTRRLFRRIAEAAEEGGGEEKSDGDTRTFGRCANMTPAILASDQTETD---QQTTRKRRRGVDDRADSKKTWYAPPGTALDELMLHLHLGGVACTGKLTSYSDWDSLSLPAHGIIVRTWCGASMGGLDPDSLECDEATRLTELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWTGPIVGAEDALGTTYGSGDWQCDINGAHT 804 SHRG GA +GP T+LRP +HVGVREGHVYRLVL+GPW+DRF G SLDVA EH VRT R FRRI+E EE + + +TF A++ I+A QT D Q ++R+ G + KTWYAPPGTALDELMLHLHL GV+C +LT+YS WDSLSLPAHGII R+WC ASMGGLDPD E D+ATRL ELH K RGV+DFRVSS+YS SL ALLEVCW GP+VGAEDA G++YG DWQCDINGAHT Sbjct: 386 SHRGPGANTLGPSDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRF--------GSSLDVAIEHRVRTYRKFRRISEMTEEEEEPDTTGFGAKTFSCVADIVSDIMAIKQTREDHNRQPVEKERKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCISRLTNYSHWDSLSLPAHGIITRSWCSASMGGLDPDDFEPDQATRLIELH-----KFCRGVLDFRVSSQYSKSLFALLEVCWRGPMVGAEDASGSSYGREDWQCDINGAHT 641 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8189.17181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8189.17181.1 >prot_L-elsbetiae_contig8189.17181.1 ID=prot_L-elsbetiae_contig8189.17181.1|Name=mRNA_L-elsbetiae_contig8189.17181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp MKHELVQSGTGRRVPGLLAVRPVVDSSPALTSGLLVRLRLVRGEDGRRHVback to top mRNA from alignment at L-elsbetiae_contig8189:827..1630+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8189.17181.1 ID=mRNA_L-elsbetiae_contig8189.17181.1|Name=mRNA_L-elsbetiae_contig8189.17181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig8189:827..1630+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8189:827..1630+ >mRNA_L-elsbetiae_contig8189.17181.1 ID=mRNA_L-elsbetiae_contig8189.17181.1|Name=mRNA_L-elsbetiae_contig8189.17181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig8189:827..1630+ (Laminarionema elsbetiae ELsaHSoW15)back to top |