mRNA_L-elsbetiae_contig8177.17173.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8177.17173.1
Unique NamemRNA_L-elsbetiae_contig8177.17173.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5JJ92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ92_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 1.660e-82
Identity = 133/190 (70.00%), Postives = 155/190 (81.58%), Query Frame = 2 
Query: 1115 GDKSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            G KSY A AVLA I+++  A GGD ST  A RRKS+HCVPR CEVIA  ENR RWAEHRT+LT+QELD KVT +TR +L+DVW Q KD  ++VPSTF DD +VMA GIDP++VHQPD+SY+KF+TMKND+VKDHGDMY  FK+SGS GEMY FC   LDTYYYGLMV +YPE+E ATTQMLP+GTE ENT
Sbjct:   22 GKKSYTAAAVLAVIQERAQAEGGDQST--ASRRKSRHCVPRLCEVIARPENRARWAEHRTQLTKQELDAKVTGRTRQVLLDVWNQFKDKGLQVPSTFADDDRVMAAGIDPNVVHQPDISYDKFMTMKNDLVKDHGDMYGNFKKSGSMGEMYEFCKGRLDTYYYGLMVTQYPEIEQATTQMLPDGTERENT 209
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5J889_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J889_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 1.630e-57
Identity = 102/190 (53.68%), Postives = 142/190 (74.74%), Query Frame = 2 
Query: 1115 GDKSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            GDKSY A A++ A+K++   NG D+S+S   RRKSKHCVPRFCE++  ++ R R+ E RT+L+R+ELD K T   R+I +++WE  KD   EVPS+F DD  ++  GI+P+ VHQPD++++KF TM+ ++ KDHG+MY  +K+SGS+ EMYSFC ESLDTYY+GL  +K P++ A   QMLP+GT SENT
Sbjct:  419 GDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKDKIFEVPSSFADDHHIVGAGINPNTVHQPDITFQKFTTMRTELFKDHGEMYSNYKKSGSNAEMYSFCKESLDTYYFGLTTDKCPDILAVCDQMLPDGTASENT 608
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5JWT0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT0_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.080e-57
Identity = 103/190 (54.21%), Postives = 143/190 (75.26%), Query Frame = 2 
Query: 1115 GDKSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            GDKSY A A++ A+K++   NG D+S+S   RRKSKHCVPRFCE++  ++ R R+ E RT+L+R+ELD K T   R+I +++WE  KD S EVPS+F DD  ++  GI+P+ VHQPD++++KF TM+ ++ KDHG+MY  +K+SGS+ EMYSFC ESLDTYY+GL  +K P++ A   QMLP+GT SENT
Sbjct:  663 GDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKDESFEVPSSFADDHHIVGAGINPNTVHQPDITFQKFTTMRTELFKDHGEMYSNYKKSGSNAEMYSFCKESLDTYYFGLTTDKCPDILAVCDQMLPDGTASENT 852
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5K787_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K787_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 3.820e-51
Identity = 93/188 (49.47%), Postives = 133/188 (70.74%), Query Frame = 2 
Query: 1121 KSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            KSY   A++AAIK++  A+G  +      RRKS+HCVPRFCE++   + R R+   R +L+++ELD K    TR+I +++WE  KD   +VP +F DD  +   GI+P++VHQPD+S++KF TM+ D+ KDHG+MY  FK+SGS+G+M+SFC ESLDTYY+GL  EK P++ A   QMLP+GT  E+T
Sbjct:  184 KSYTVAAIMAAIKEEDRADGRGEGIGQ--RRKSRHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKVPRSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGDMFSFCKESLDTYYFGLTAEKCPDILAVCDQMLPDGTAREST 369
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5L890_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L890_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.080e-49
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = 2 
Query: 1121 KSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            KSY   A++AAIK++  A+G  +      RRKSKHCVPRFCE++   + R R+   R +L+++ELD K    TR+I +++WE  KD   +VPS+F DD  +    I+P++VHQPD+S++KF TM+ D+ KDHG+MY  FK+SGS+GEM+SFC ESLDTYY+GL  EK P++     QMLP+GT  E+T
Sbjct:  411 KSYTVAAIMAAIKEEDRADGRGEGIGQ--RRKSKHCVPRFCELLMHPQFRERFGVSRLQLSKKELDVKQKGTTRDIHLEIWEAFKDEKFKVPSSFADDSNIFGASINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGEMFSFCKESLDTYYFGLTAEKCPDILTVCDQMLPDGTAREST 596
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5JRL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL7_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.220e-46
Identity = 94/208 (45.19%), Postives = 132/208 (63.46%), Query Frame = 2 
Query: 1121 KSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPS--------------------VEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            KSY    ++AAIK+   A+G  +      RRKSKHCVPRFCE++   + R R+   R +L+++ELD K    TR+I +++WE  KD                      V VPS+F DD  +   GI+P++VHQPD+S++KF T++ D+ KDHG+MY  FK+SGS+G+M+SFC ESLDTYY+GL  EK P++ A   QMLP+GT  E+T
Sbjct:  167 KSYAVATIMAAIKEDDRADGRGEGIGQ--RRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFNVRCFLNFFCMFQFDLGVVVVVPSSFADDSNIFGAGINPNVVHQPDISFQKFATVRADLFKDHGEMYSNFKKSGSNGDMFSFCKESLDTYYFGLTAEKCPDILAVCDQMLPDGTAREST 372
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5JHA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA4_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 5.580e-37
Identity = 74/158 (46.84%), Postives = 110/158 (69.62%), Query Frame = 2 
Query: 1121 KSYPATAVLAAIKKQGTANGGDDSTSTAGRRKSKHCVPRFCEVIALEENRGRWAEHRTKLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDT 1594
            KSY   A++AAIK++  A+G  +      RRKSKHCVPRFCE++   + R R+   R +L+++E D K    TR+I +++WE  KD + +VPS+F DD  +   GI+P++VHQPD+S++KF TM+ D+ KDHG+MY  FK+SGS+G+M+SFC    +T
Sbjct:  536 KSYTVAAIMAAIKEEDRADGRGEGIGQ--RRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKEQDAKQKGTTRDIHLEIWEAFKDETFKVPSSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGDMFSFCKVEFNT 691
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5K1S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 8.120e-36
Identity = 128/299 (42.81%), Postives = 162/299 (54.18%), Query Frame = 3 
Query:  246 MDTNMEATRA-SGRQTKKPLKYQQTGSLGAAVGGGGLLASTPK-LPGITGTTHETTGGAAATTTQSEGVADRPREATPTAQPKGKSKAKAAYPKLLQAVMQDPNFRDDSSGESDHSTASPVIRIDGRNSSSDSXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRGPSGSRGGLAARAKAAQQLKGSVARNRSKAYDRWPVSLLKETCSMRKIAGYSKCNDQKKMAEVLEQVDKVFERSSPYLKDLDDRVAGGTPASHPAAH--EESEIPEELIMATISAVQMGASFKPEKLLECKGTSRT 1130
            MD ++E T    GR TK P KYQ   SLGAAVGGGGLL+STP  LPG  GT    TGGA+ T TQSEGVA  P    PT                  A  Q      DS  E D           G +  S  XXXXXXXXXXXXXXX                 +GS   + + A+  +QL+ S+ RNR+K+Y++W   LL+E C++R+++GYS+  D  KMA  L Q+D V  RSSPYL DL+D+  GGTP S P A   E   +P+ LI A  +A++ G S +P K+ +C G S T
Sbjct:    1 MDNSVETTTTLRGRHTKVPAKYQHNRSLGAAVGGGGLLSSTPNPLPGFKGTARSNTGGASDTNTQSEGVAGGPGHVAPT------------------ASAQQRTGNSDSESEDDDRGRQHGRGAGGADGGSSXXXXXXXXXXXXXXXXSR---------------AGSSAAVESVARTMRQLQSSLNRNRNKSYNKWSAYLLREACALRRLSGYSRSKDTDKMAAGLTQLDIVMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYT 266
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5JVA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA9_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.740e-35
Identity = 139/302 (46.03%), Postives = 181/302 (59.93%), Query Frame = 3 
Query:  246 MDTNMEATRA-SGRQTKKPLKYQQTGSLGAAVGGGGLLASTPK-LPGITGTTHETTGGAAATTTQSEGVADRPREATPTAQPKGKSKAKAAYPKL---LQAVMQDPNFRDDSSGESDHSTASPVIRIDGRNSSSDSXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRGPSGSRGGLAARAKAAQQLKGSVARNRSKAYDRWPVSLLKETCSMRKIAGYSKCNDQKKMAEVLEQVDKVFERSSPYLKDLDDRVAGGTPASHPAAH--EESEIPEELIMATISAVQMGASFKPEKLLECKGTSRT 1130
            MD ++E T    GR TK P KYQ  GSLGAAVGGGGLL+STP  L G  GT    TGGA+ T TQSEGVA  P    PTA  + ++  ++A   L   + A++QD  F   S G S    +S              XXXXXXXXXXXXXXXXXXXXXXXXXX  R   +GS   + +  +  +QL+ S+ RNR+K+Y++W   LL+E C+ R+++GYS+     KMA  L Q D V  R+SPYL DL+D+  GGTP S P A   E   +P++LI A  +A++   S +P K+ +C G S T
Sbjct:    1 MDNSVETTTTLRGRHTKVPAKYQHNGSLGAAVGGGGLLSSTPNPLHGFKGTARSNTGGASDTNTQSEGVAGGPGHVAPTASAQQRTGTRSAADHLSHEVDAILQDARFNSTSDGGSIRVGSSSXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSRAGSSAAVESVTRTMRQLQSSLNRNRNKSYNKWSAYLLREACAPRRLSGYSRSKGTDKMAAGLTQHDIVMSRTSPYLADLEDKATGGTPPSKPPASSAEAQRVPQDLITAVRAAIRSELSPEPNKMYDCDGKSYT 298
[Close]
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Match: A0A6H5K9X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X7_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.240e-34
Identity = 69/130 (53.08%), Postives = 97/130 (74.62%), Query Frame = 2 
Query: 1295 KLTRQELDTKVTNKTRNILIDVWEQMKDPSVEVPSTFGDDPQVMANGIDPSIVHQPDMSYEKFITMKNDIVKDHGDMYYKFKQSGSHGEMYSFCNESLDTYYYGLMVEKYPELEAATTQMLPEGTESENT 1684
            +L+++ELD K    TR+I +++ E  KD   +VPS+F DD  +   GI+P++VHQPD+S++KF TM+ D+ KDHG+MY  FK+SGS+GEM+SFC ESLDTYY+GL  EK P++ A   QMLP+GT  E+T
Sbjct:  262 QLSKKELDAKQKGTTRDIHLEILEAFKDEKFKVPSSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGEMFSFCKESLDTYYFGLTAEKCPDILAVCDQMLPDGTAREST 391
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8177.17173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ92_9PHAE1.660e-8270.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J889_9PHAE1.630e-5753.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT0_9PHAE2.080e-5754.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K787_9PHAE3.820e-5149.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L890_9PHAE1.080e-4950.00Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL7_9PHAE1.220e-4645.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHA4_9PHAE5.580e-3746.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1S9_9PHAE8.120e-3642.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVA9_9PHAE1.740e-3546.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9X7_9PHAE1.240e-3453.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8177contigL-elsbetiae_contig8177:5265..8820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1686
Cds size1056
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8177.17173.1prot_L-elsbetiae_contig8177.17173.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8177 6819..8575 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816901.4872556-UTR-L-elsbetiae_contig8177:5264..53701622816901.4872556-UTR-L-elsbetiae_contig8177:5264..5370Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 5265..5370 -
1691683898.7892265-UTR-L-elsbetiae_contig8177:5264..53701691683898.7892265-UTR-L-elsbetiae_contig8177:5264..5370Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 5265..5370 -
1622816901.498416-UTR-L-elsbetiae_contig8177:6205..63951622816901.498416-UTR-L-elsbetiae_contig8177:6205..6395Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 6206..6395 -
1691683898.801469-UTR-L-elsbetiae_contig8177:6205..63951691683898.801469-UTR-L-elsbetiae_contig8177:6205..6395Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 6206..6395 -
1622816901.5117505-UTR-L-elsbetiae_contig8177:6729..68181622816901.5117505-UTR-L-elsbetiae_contig8177:6729..6818Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 6730..6818 -
1691683898.8099346-UTR-L-elsbetiae_contig8177:6729..68181691683898.8099346-UTR-L-elsbetiae_contig8177:6729..6818Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 6730..6818 -
1622816901.5547307-UTR-L-elsbetiae_contig8177:8575..88201622816901.5547307-UTR-L-elsbetiae_contig8177:8575..8820Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 8576..8820 -
1691683898.8360336-UTR-L-elsbetiae_contig8177:8575..88201691683898.8360336-UTR-L-elsbetiae_contig8177:8575..8820Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8177 8576..8820 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816901.5268986-CDS-L-elsbetiae_contig8177:6818..71321622816901.5268986-CDS-L-elsbetiae_contig8177:6818..7132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8177 6819..7132 -
1691683898.8185737-CDS-L-elsbetiae_contig8177:6818..71321691683898.8185737-CDS-L-elsbetiae_contig8177:6818..7132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8177 6819..7132 -
1622816901.541906-CDS-L-elsbetiae_contig8177:7833..85751622816901.541906-CDS-L-elsbetiae_contig8177:7833..8575Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8177 7834..8575 -
1691683898.8272789-CDS-L-elsbetiae_contig8177:7833..85751691683898.8272789-CDS-L-elsbetiae_contig8177:7833..8575Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8177 7834..8575 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8177.17173.1

>prot_L-elsbetiae_contig8177.17173.1 ID=prot_L-elsbetiae_contig8177.17173.1|Name=mRNA_L-elsbetiae_contig8177.17173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=352bp
MDTNMEATRASGRQTKKPLKYQQTGSLGAAVGGGGLLASTPKLPGITGTT
HETTGGAAATTTQSEGVADRPREATPTAQPKGKSKAKAAYPKLLQAVMQD
PNFRDDSSGESDHSTASPVIRIDGRNSSSDSSGEDDEDEDEDEDKDDEFE
LEVRGRGAGRRGPSGSRGGLAARAKAAQQLKGSVARNRSKAYDRWPVSLL
KETCSMRKIAGYSKCNDQKKMAEVLEQVDKVFERSSPYLKDLDDRVAGGT
PASHPAAHEESEIPEELIMATISAVQMGASFKPEKLLECKGTSRTRPPPF
WPPSRSKVPPTGATTAPAPQGVERASTASRGFVKSSPWKRIAEGGRSTGR
S*
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mRNA from alignment at L-elsbetiae_contig8177:5265..8820-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8177.17173.1 ID=mRNA_L-elsbetiae_contig8177.17173.1|Name=mRNA_L-elsbetiae_contig8177.17173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3556bp|location=Sequence derived from alignment at L-elsbetiae_contig8177:5265..8820- (Laminarionema elsbetiae ELsaHSoW15)
AGACCACGTTCTAGCAATCACCTTCTGCGCCGGTGCTAAGGCCCATTGTA
ATCGAACCGCAAAATTTGAACCAACGTTCCAACTTTTGGATCCAAATTTT
TGACACCTGTCTGCATTCATTGTAAACGCAGTGACGTGCATAATATTGTT
CCAAAAAGGGCTCAAACAGCGTCGGTGGACATGACATGTAGACCTCTCTT
CAAAACCACCAAGCACACACAACCACGACCAGAGAGCATAACAGCATGGA
CACCAACATGGAGGCAACTAGGGCTAGTGGTCGGCAGACCAAAAAGCCGT
TGAAATACCAGCAGACGGGCTCTCTCGGTGCCGCCGTCGGTGGTGGAGGC
CTGCTGGCCAGCACACCCAAGCTGCCCGGCATCACGGGAACCACTCATGA
GACCACGGGAGGTGCTGCCGCCACCACCACTCAGAGCGAGGGTGTAGCTG
ACCGCCCGCGTGAGGCGACGCCCACCGCTCAACCGAAAGGAAAAAGCAAG
GCCAAGGCGGCGTACCCCAAGCTACTGCAAGCTGTGATGCAAGACCCAAA
CTTCCGCGATGACAGCAGCGGCGAATCAGACCACAGCACCGCCAGCCCTG
TTATCCGCATCGATGGCCGAAACAGCAGCAGCGACTCCAGCGGCGAGGAC
GACGAGGACGAGGACGAGGACGAGGACAAGGACGATGAGTTCGAGTTAGA
AGTGCGGGGCAGGGGAGCAGGCCGCCGCGGACCCTCCGGATCTCGCGGAG
GCCTTGCGGCTAGGGCCAAGGCCGCGCAGCAGCTGAAGGGTTCGGTGGCG
CGAAACCGCAGCAAAGCCTACGACAGGTGGCCCGTCAGCCTCCTGAAGGA
GACGTGTTCCATGCGGAAGATCGCCGGCTACTCGAAGTGCAACGACCAAA
AGAAGATGGCCGAGGTCTTAGAGCAGGTGGACAAGGTCTTCGAGAGGAGC
AGCCCCTACCTGAAGGATTTAGACGACAGGGTTGCAGGTGAACAAACATA
GCTATATACAACAGCAGTAGTTTTCCTCGTGTCCCTTTCGCCCACTCTTT
TTCGTGCCTGTTCTGTCGGCTCTCTCTCACCGACTCCATGTGCATTATTG
TAGGCTGTCACGTAGAAATATATACCCGACACAACCGACACGGAGGGTTA
GGCAGGTGCGCACCTCCTGGTATGCACATGGGTTGTTGTGGGCATCGATT
TGCGATATAGCTGTAGTGTCGTGAAGAGAAATTGTGTTCGAAGTCCAGAC
AACTCTAGGAGAGAGAGAGACATACACGCACTGAGGGCAAGAGATGGCAG
TGCTGAAAAAAGGGTGCCGCGCACAGCTCTCCCCCGCGTTCGACGTCATG
ATGTTGCGATCGGGCGGCACGCTTGTTCGTTCGTCATGCTAGTGTCGCAC
GCAGGCACGGGGGTACAGGAAAACGCGTGAAACATGTCGTTACGTAGGAG
GTATACTATTAGGTAACATGCCGTTTGTTTTAGTCCCTGGTCGTGGTGAA
GACGCAGCCTCGGGCAAGGTGTGTGCGCACGCCGCACACGCCCTTCTTCA
TTCTTGCTCTGGTGTGTACGACGTCGTCCTTTACGAGAGGTTGTCTATGC
ACTAGCTTCAAAACAGCAGGTAGTTGCCGATATGTACGTTCCTGACCCGC
CCCCACCCCGCTGAACCCACTTGCGCGTGAACCGACAGGCGGCACGCCAG
CCTCCCACCCAGCGGCGCACGAAGAGTCGGAGATCCCTGAAGAGCTCATC
ATGGCGACGATCTCAGCGGTGCAAATGGGGGCGAGCTTCAAGCCGGAGAA
GCTGCTGGAATGCAAGGGGACAAGTCGTACCCGGCCACCGCCGTTTTGGC
CGCCATCAAGAAGCAAGGTACCGCCAACGGGGGCGACGACAGCACCAGCA
CCGCAGGGCGTCGAAAGAGCAAGCACTGCGTCCCGCGGTTTTGTGAAGTC
ATCGCCCTGGAAGAGAATCGCGGAAGGTGGGCGGAGCACCGGACGAAGCT
AACCAGGCAAGAGCTGGACACCAAGGTTACGAACAAGACGCGCAACATCC
TCATCGACGTCTGGGAACAGATGAAGGACCCCAGCGTGGAGGTGAGGGTT
AGTTCATGTGCAGGCTGTACTATCCAGTGTTTACACTCTCAGCAGGTTCA
GGTCCCGTTGTTGTTGTTCAAATCGGCTGTGAGACACACACCTGTGGATG
CCACGTTACATTTGCAGCATCGAGCCTTCTCAGTAGCAAGTAGAGAACGG
AGGACAACCAGCAGCCAGAGTCAAGGGCAACTATTCAAAGCAGTCTAGAA
TGAATGAAAGCATCCCGCTGTGACTCCTTCCAAAGAACGCTTGTTGGGTG
CCCGGTTCAAAGTTGAGATAATAATGAAAGGCACGCGTTCAACCACCTCC
CGTGATTCGTATGACGACCTTGCAGGTGCCCTCTACTTTCGGCGACGATC
CGCAAGTGATGGCCAACGGCATCGACCCCAGCATCGTTCACCAGCCGGAC
ATGAGCTACGAAAAGTTCATCACGATGAAGAACGACATTGTCAAGGACCA
TGGCGACATGTACTACAAGTTCAAGCAATCTGGGAGCCACGGAGAGATGT
ACAGTTTCTGCAACGGTGAGTTCCGTGCCTTGTCGGTGCCGATGCGTCGG
GAAGGATATGTTGAACGGAATCATATCTTCACCATCCGTGAAGGTTTTAG
GTTGGTTGTTTTTCTAATGCCACGGCAGCCCACTGTTTTTCTTCAACACG
CAGTGGAAGTGGAGCAAAAGGAAGGGCTAGGGGAAAGGGTTAAGTGTGTA
TAGTATGTAACCGTCCCCCTGGGACTGTTTATTCGCAGCTAGGACGTAGT
ATGCCGCTGACGTTTGTATGCAAACATGAAATGGAAGGGGTAGGCGGCAC
CCGGACGATGGGTCGTTGTCGGTTGGGGAATTTTCCGGTAACGTAGCTGT
ACTATTTGCGATGCACCAACACGAACTCGTTGGATCCTGACACTACACAA
CGACTGACGGCGGCAAAAATTCATCGGAGCAAACTTCTCTCACGTCACCT
ACGTACCCTGGCACGCCGAACCATACGTGCACTGTTTTGGACGTTGCTGT
TGAGCGCTGAGACTGGGTCGTTTTTCTCTGCGTGTGTGCGCTTGTGTTGT
TCTTCGGGTTTGTTGGCGTTGTCCCTCCTGGTGCGAGTTCGTGATAACGG
GCAAGAGACTCGAAACTGTATGCATCGCAAGTTTGGCACAAGAGACTCTG
GGTGTCATTTTCTGTTTGTTGTTTGCTCAGCGGTTAGGGTTACCCCCCGC
CCTCACCCCCGTGGGGGAAACTCCGCCAACGATGGCAGTTGCAAATGGCA
AAGGAACGCTTGTGTCCAATGCCCGCACACCTAACCCGACCCCCTGGACG
CTTGGCCCCCCACCACCCCTGCGCTCTGACCCTAACACGCGAAATTCCAG
AAAGCCTGGACACGTACTACTACGGTCTCATGGTCGAGAAGTACCCTGAG
CTGGAGGCGGCAACCACCCAGATGCTTCCCGAGGGCACTGAAAGCGAGAA
CACGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8177:5265..8820-

>mRNA_L-elsbetiae_contig8177.17173.1 ID=mRNA_L-elsbetiae_contig8177.17173.1|Name=mRNA_L-elsbetiae_contig8177.17173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2112bp|location=Sequence derived from alignment at L-elsbetiae_contig8177:5265..8820- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACACCAACATGGAGGCAACTAGGGCTAGTGGTCGGCAGACCAAAAA
GCCGTTGAAATACCAGCAGACGGGCTCTCTCGGTGCCGCCGTCGGTGGTG
GAGGCCTGCTGGCCAGCACACCCAAGCTGCCCGGCATCACGGGAACCACT
CATGAGACCACGGGAGGTGCTGCCGCCACCACCACTCAGAGCGAGGGTGT
AGCTGACCGCCCGCGTGAGGCGACGCCCACCGCTCAACCGAAAGGAAAAA
GCAAGGCCAAGGCGGCGTACCCCAAGCTACTGCAAGCTGTGATGCAAGAC
CCAAACTTCCGCGATGACAGCAGCGGCGAATCAGACCACAGCACCGCCAG
CCCTGTTATCCGCATCGATGGCCGAAACAGCAGCAGCGACTCCAGCGGCG
AGGACGACGAGGACGAGGACGAGGACGAGGACAAGGACGATGAGTTCGAG
TTAGAAGTGCGGGGCAGGGGAGCAGGCCGCCGCGGACCCTCCGGATCTCG
CGGAGGCCTTGCGGCTAGGGCCAAGGCCGCGCAGCAGCTGAAGGGTTCGG
TGGCGCGAAACCGCAGCAAAGCCTACGACAGGTGGCCCGTCAGCCTCCTG
AAGGAGACGTGTTCCATGCGGAAGATCGCCGGCTACTCGAAGTGCAACGA
CCAAAAGAAGATGGCCGAGGTCTTAGAGCAGGTGGACAAGGTCTTCGAGA
GGAGCAGCCCCTACCTGAAGGATTTAGACGACAGGGTTGCAGATGGACAC
CAACATGGAGGCAACTAGGGCTAGTGGTCGGCAGACCAAAAAGCCGTTGA
AATACCAGCAGACGGGCTCTCTCGGTGCCGCCGTCGGTGGTGGAGGCCTG
CTGGCCAGCACACCCAAGCTGCCCGGCATCACGGGAACCACTCATGAGAC
CACGGGAGGTGCTGCCGCCACCACCACTCAGAGCGAGGGTGTAGCTGACC
GCCCGCGTGAGGCGACGCCCACCGCTCAACCGAAAGGAAAAAGCAAGGCC
AAGGCGGCGTACCCCAAGCTACTGCAAGCTGTGATGCAAGACCCAAACTT
CCGCGATGACAGCAGCGGCGAATCAGACCACAGCACCGCCAGCCCTGTTA
TCCGCATCGATGGCCGAAACAGCAGCAGCGACTCCAGCGGCGAGGACGAC
GAGGACGAGGACGAGGACGAGGACAAGGACGATGAGTTCGAGTTAGAAGT
GCGGGGCAGGGGAGCAGGCCGCCGCGGACCCTCCGGATCTCGCGGAGGCC
TTGCGGCTAGGGCCAAGGCCGCGCAGCAGCTGAAGGGTTCGGTGGCGCGA
AACCGCAGCAAAGCCTACGACAGGTGGCCCGTCAGCCTCCTGAAGGAGAC
GTGTTCCATGCGGAAGATCGCCGGCTACTCGAAGTGCAACGACCAAAAGA
AGATGGCCGAGGTCTTAGAGCAGGTGGACAAGGTCTTCGAGAGGAGCAGC
CCCTACCTGAAGGATTTAGACGACAGGGTTGCAGGCGGCACGCCAGCCTC
CCACCCAGCGGCGCACGAAGAGTCGGAGATCCCTGAAGAGCTCATCATGG
CGACGATCTCAGCGGTGCAAATGGGGGCGAGCTTCAAGCCGGAGAAGCTG
CTGGAATGCAAGGGGACAAGTCGTACCCGGCCACCGCCGTTTTGGCCGCC
ATCAAGAAGCAAGGTACCGCCAACGGGGGCGACGACAGCACCAGCACCGC
AGGGCGTCGAAAGAGCAAGCACTGCGTCCCGCGGTTTTGTGAAGTCATCG
CCCTGGAAGAGAATCGCGGAAGGTGGGCGGAGCACCGGACGAAGCTAAGC
GGCACGCCAGCCTCCCACCCAGCGGCGCACGAAGAGTCGGAGATCCCTGA
AGAGCTCATCATGGCGACGATCTCAGCGGTGCAAATGGGGGCGAGCTTCA
AGCCGGAGAAGCTGCTGGAATGCAAGGGGACAAGTCGTACCCGGCCACCG
CCGTTTTGGCCGCCATCAAGAAGCAAGGTACCGCCAACGGGGGCGACGAC
AGCACCAGCACCGCAGGGCGTCGAAAGAGCAAGCACTGCGTCCCGCGGTT
TTGTGAAGTCATCGCCCTGGAAGAGAATCGCGGAAGGTGGGCGGAGCACC
GGACGAAGCTAA
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