mRNA_L-elsbetiae_contig8177.17172.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5K787_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K787_9PHAE) HSP 1 Score: 115 bits (287), Expect = 4.890e-27 Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = -3 Query: 34 AAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASA 462 A+ADA KR ES+ERN + GHQ KKKKKQ IE+ K+AMS K ELGL L GT SAPTYADAPTSFYDT EG E + K E+ KLR E + +K+ I KE+ G+ +EDL+ + +R VRA +KK+ +A Sbjct: 384 ASADASKRKVAKVESRERNVGVSGHQ-KKKKKQDAQIENTAKVAMSAVKGELGLD----ALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDRATTVRAQIKKETAA 521
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5JVA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA9_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.960e-26 Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = -3 Query: 34 AAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASA 462 A+ADA KR E +ERN + GHQ KKKKKQ IE+ KIAMS K ELGL L GT SAPTYADAPTSFYDT EG E +A K E+ KLR E + +K+ I KE+ G+ +EDL+ +++R V A +KK+ +A Sbjct: 521 ASADASKRKVAKVEPRERNVGVSGHQ-KKKKKQDAQIENTAKIAMSAVKGELGLD----ALFGTSSAPTYADAPTSFYDTKEGLENKAAKLEYIAKLRKELQEIKEDIRKEKGLGSDADEEDLQLLQDRATTVTAQIKKETAA 658
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5K1S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 6.600e-25 Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = -3 Query: 34 AAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASA 462 A+ADA KR ES+ERN + GHQ +KKKKQ IE+ K+AMS K ELGL L GT SAPTYADAPTSFYDT EG E + K E+ KLR E + +K+ I KE+ G+ +EDL+ + + VRA ++K+ +A Sbjct: 411 ASADASKRKVAKVESRERNVGVSGHQ-EKKKKQDAQIENTAKVAMSAVKGELGLD----ALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDWATTVRAQIRKETAA 548
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5L890_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L890_9PHAE) HSP 1 Score: 100 bits (250), Expect = 7.870e-22 Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = -3 Query: 34 AAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASA 462 A+AD KR ES+ERN + GHQ KKK+KQ IE+ K+AMS K ELGL L GT SAPTYA APTSFYDT EG E + K E KLR E + +K I+KE+ G+ +ED++ + +R RA + K+ A Sbjct: 611 ASADTSKRKVAKVESRERNVGVSGHQ-KKKRKQDAQIENTAKVAMSAVKGELGLD----ALFGTSSAPTYAGAPTSFYDTKEGLENKTTKLEHIAKLRKELQEIKKDIKKEKELGSDADEEDVQLLRDRATTFRAQITKETVA 748
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5KX48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX48_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 3.350e-21 Identity = 64/122 (52.46%), Postives = 77/122 (63.11%), Query Frame = -3 Query: 91 ADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLE 456 ADA KR ES+ERN + G KKKKKQ IE+ K+AMS K ELGL L GT SAPTYADAPTSFYDT EG E +A K E+ KLR E + +K+ I KE+ G+ +EDL+ Sbjct: 212 ADASKRKVAKVESRERNVGVNGQ--KKKKKQDTQIENTAKVAMSAVKGELGLD----ALVGTSSAPTYADAPTSFYDTKEGLENKAAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQ 327
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5KFT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT5_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 8.610e-21 Identity = 66/143 (46.15%), Postives = 81/143 (56.64%), Query Frame = -3 Query: 34 AAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASA 462 A+ADA KR ES+ERN + GHQ KKKKKQ IE+ K+AMS K ELGL L GT SAPTYADAPTSFYDT EG L + I KE+ G+ +EDL+ + +R VRA +KK+ +A Sbjct: 30 ASADASKRKVAKVESRERNVGVSGHQ-KKKKKQDAQIENTAKVAMSAVKGELGLD----ALFGTSSAPTYADAPTSFYDTKEG--------------------LXEDIRKEKELGSDADEEDLQLLRDRATTVRAQIKKETAA 147
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5JJ92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ92_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 2.080e-19 Identity = 66/149 (44.30%), Postives = 92/149 (61.74%), Query Frame = -3 Query: 28 AAAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLG-GLGAVL--SGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASAPI 465 AAAADA++R A ++ER+ L +K DIE T++AM+ AK+ LGLG G+G++L S PS + DAPTSF+DTIEGC+T+AKK E ++ LR E + +K I KE+A G+ EDLE ME VR L+K + + Sbjct: 223 AAAADARRRTEAKAGAKERSVDLXXXXXXXXXXEK-DIEHVTRVAMTAAKDTLGLGAGIGSLLDMSSGPSGLKFDDAPTSFFDTIEGCDTKAKKLELSSLLRKELQDIKASIRKEKALGSEADPEDLELMELEANRVRVALRKQLAEAL 370
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5JY80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY80_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 6.290e-19 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = -3 Query: 115 ESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGA 423 +S ER+A L G Q +KKK K+IEDA K+ S A EELGLG A L G PS+P Y+DAPTSFYDTIEGCETR KK E++ +LR +K+ I KE+A+G+ Sbjct: 329 DSTERDATL-GVQ-EKKKXXXKEIEDAAKVVASAATEELGLGAGLASLLGMPSSPKYSDAPTSFYDTIEGCETRNKKLEYSARLRQTLADIKEDIRKEKARGS 429
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5JRL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL7_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 1.010e-17 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = -3 Query: 34 GHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASA 393 G A K++ IE+ K+AMS ELGL L GT SAPTYADAPTSFYDT EG E + K E+ KLR E + +K+ I KE+ G+ +EDL+ + +R VRA +KK+ +A Sbjct: 386 GASADASKRKDAQIENTAKVAMSAVNGELGLD----ALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDRATTVRAQIKKETAA 501
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Match: A0A6H5J889_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J889_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 7.380e-17 Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = -3 Query: 31 AAADAKKRATVTAESQERNAALCGHQAKKKKKQKKDIEDATKIAMSTAKEELGLGGLGAVLSGTPSAPTYADAPTSFYDTIEGCETRAKKAEFATKLRDERESLKDKIEKEEAKGARRSDEDLEEMEERLKNVRAWLKKDASAP 462 AAADA KR ES+ERNAA+ G KK+K+Q I K AM T LGLG T S P Y DAPTS+Y+T +G E++A K + TKLR E + +K+ I EEA+G + EDLE + + +VRA L + S P Sbjct: 623 AAADAGKRKAAKVESKERNAAVSGRD-KKQKRQADMIASTAKAAMETMLPTLGLG--------TSSGPAYTDAPTSYYETKDGIESKAAKTDLRTKLRKELKEIKEDIRVEEARGNAANKEDLELLRMQHSSVRAQLFELLSTP 757 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8177.17172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8177.17172.1 >prot_L-elsbetiae_contig8177.17172.1 ID=prot_L-elsbetiae_contig8177.17172.1|Name=mRNA_L-elsbetiae_contig8177.17172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp PAAAASPTSNGCACVLLQPGPHILEPLFHLLQVLIAAARALGFLLLDLVLback to top mRNA from alignment at L-elsbetiae_contig8177:4766..5232+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8177.17172.1 ID=mRNA_L-elsbetiae_contig8177.17172.1|Name=mRNA_L-elsbetiae_contig8177.17172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=467bp|location=Sequence derived from alignment at L-elsbetiae_contig8177:4766..5232+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8177:4766..5232+ >mRNA_L-elsbetiae_contig8177.17172.1 ID=mRNA_L-elsbetiae_contig8177.17172.1|Name=mRNA_L-elsbetiae_contig8177.17172.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=654bp|location=Sequence derived from alignment at L-elsbetiae_contig8177:4766..5232+ (Laminarionema elsbetiae ELsaHSoW15)back to top |