mRNA_L-elsbetiae_contig8168.17164.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: A0A6H5KY68_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY68_9PHAE) HSP 1 Score: 527 bits (1357), Expect = 4.570e-184 Identity = 271/300 (90.33%), Postives = 288/300 (96.00%), Query Frame = 1 Query: 1 KNKSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPYDGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSESPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAEARAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGELETKEFNLPTKGEGQEDGVEGAPE 900 KNKSLKEMLGPKFLK+DGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVY++LQK GKPFE++FVSSDK+++EFS+YMGDMPWLSVP+DGKTRGTIAQLLGVSALPTLLVFDE+QQLITANGRQEIIKD KAENFPWYPKALAEL ESPEVITQKP+FIVFMEGGDKDEQARIRELVEPMAEARAKMVEDGK RPAGFLTASEIEPLSTAFRKLVGLDEIQGK+KFMKSKKALLKPRVALLDLM+NQFAVSE+ +LTEESLAAFVASWDAGEL+TKEFNLP KGE E EGA E Sbjct: 252 KNKSLKEMLGPKFLKADGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYSKLQKDGKPFEIVFVSSDKSEKEFSTYMGDMPWLSVPFDGKTRGTIAQLLGVSALPTLLVFDEEQQLITANGRQEIIKDTKAENFPWYPKALAELVESPEVITQKPSFIVFMEGGDKDEQARIRELVEPMAEARAKMVEDGKARPAGFLTASEIEPLSTAFRKLVGLDEIQGKYKFMKSKKALLKPRVALLDLMRNQFAVSEEGDLTEESLAAFVASWDAGELQTKEFNLPAKGE--EGDAEGAAE 549
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: A0A835Z2Y2_9STRA (Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y2_9STRA) HSP 1 Score: 293 bits (751), Expect = 1.140e-92 Identity = 151/310 (48.71%), Postives = 213/310 (68.71%), Query Frame = 1 Query: 4 NKSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPYDGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKA----ENFPWYPKALAELSESPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAEARAKM----VEDGKV------RPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGELETKEFNLPTKGEGQEDGVEG 891 NK L+++LGP+F ++DG++V EAL+GKVL +YFSA WCAPCKQFTP+LK Y ++ AGK E++++ SDK + E SY G MPWL++PY K R + +LLGV LPTLL+FDE+ +LITANGR ++ KD + NFPW+PK A+LS+SPE + + P ++FM+G K++QA++ + +P+AE RA +E G R A FL A+EI+ LS RKL GL+EIQGK+KFMKSKK ++PR L+ +++ + A+SE+ LTEE+L AF+A +DAG LE + F + QE G EG Sbjct: 221 NKGLRDLLGPEFERADGTKVGPEALQGKVLGLYFSADWCAPCKQFTPLLKETYEAVKAAGKELEIVYIGSDKEESEQKSYFGTMPWLAIPYGSKHRAIVPRLLGVQGLPTLLIFDENDKLITANGRMDVTKDVQTGTPGANFPWHPKPFADLSDSPEALARGPVVMLFMDGASKEDQAKLSAIAKPLAEERAAAFSAALEQGGAAVLEAPRKATFLAATEIDQLSATIRKLSGLEEIQGKWKFMKSKKDAMRPRFGLVSIIEGKRAISEET-LTEEALKAFLAEFDAGALELEPFTI------QEGGAEG 523
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: A0A4D9CUC9_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUC9_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.230e-60 Identity = 115/268 (42.91%), Postives = 165/268 (61.57%), Query Frame = 1 Query: 7 KSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPYDGKT-RGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSESPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAE---ARAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVS--EDVELTEES 792 K+L +MLG FL D S AE + KVLA+YFSA+WC PC++FTP L Y +++ GK EV+FVS D+T+E+F Y MPWLS+PY+ KT R + L V LPTL++ DE++++IT+ GR ++KD + FPWYP+ L E+S S + I QKP+ ++FMEG D QA++ ++ +AE A+ K+ + F A EI S A R + GL+++ K KF+KSK KPR+ LLD+ + VS ED EE+ Sbjct: 324 KTLSQMLGSTFLSKDRSVPAAEVAKKKVLALYFSANWCKPCQEFTPKLVEAYEKVRAQGKDLEVVFVSMDETEEKFKEYFAKMPWLSLPYEDKTARSLLMTELEVKGLPTLVLLDEEREVITSKGRDFVLKDPEGAKFPWYPQPLNEISYSFDGIAQKPSLVLFMEGASADAQAKMVAAMQAVAEEFTAKNKLAPEDAAHRFNFYYAQEISTFSKALRSIAGLEQLNPKDKFLKSKAESNKPRLVLLDIAKEVCHVSPAEDAGTVEET 591
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: S4S061_PETMA (Nucleoredoxin n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4S061_PETMA) HSP 1 Score: 177 bits (448), Expect = 8.220e-50 Identity = 94/281 (33.45%), Postives = 166/281 (59.07%), Query Frame = 1 Query: 7 KSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPY-DGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSES-PEVITQKPAFIVFMEGGDKDEQARIRELVEPMAE-ARAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGELETK 840 K +++ L+S G V +LEG + +YF+A+WC PCK FTP+L VY +++++GK FE++FVSSD++ E F+ Y G+MPWLSVPY D R +++L G+ +P L++ D D+ +IT R I+ D++ FPW+P+AL+ LS + E++ Q+PA ++F++ +++E +R++++P+AE A+ + G+ +P F A E + ++ + R L + P +A+LD+ V + ELT ++ FV + G+L+ + Sbjct: 60 KPFSQVIAGPLLRSSGESVDYSSLEGHFIGMYFAANWCPPCKSFTPMLLEVYRRVRESGKKFEIIFVSSDRSDESFAQYFGEMPWLSVPYADTARRLNLSKLYGIQGIPALVMLDVDRSVITPAARVAIMDDREGRLFPWFPRALSMLSAANAEILNQEPALVLFVDSNEEEELEPVRQMLQPIAEQVIAEYKQRGEEQPLHFFYAGE-DDMADSIRDFTALPDCA--------------PLLAILDIPARVKYVKDAEELTGHVISEFVGDYLHGKLQAE 325
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: UPI0014021E3C (nucleoredoxin isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014021E3C) HSP 1 Score: 177 bits (448), Expect = 1.300e-48 Identity = 94/281 (33.45%), Postives = 166/281 (59.07%), Query Frame = 1 Query: 7 KSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPY-DGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSES-PEVITQKPAFIVFMEGGDKDEQARIRELVEPMAE-ARAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGELETK 840 K +++ L+S G V +LEG + +YF+A+WC PCK FTP+L VY +++++GK FE++FVSSD++ E F+ Y G+MPWLSVPY D R +++L G+ +P L++ D D+ +IT R I+ D++ FPW+P+AL+ LS + E++ Q+PA ++F++ +++E +R++++P+AE A+ + G+ +P F A E + ++ + R L + P +A+LD+ V + ELT ++ FV + G+L+ + Sbjct: 177 KPFSQVIAGPLLRSSGESVDYSSLEGHFIGMYFAANWCPPCKSFTPMLLEVYRRVRESGKKFEIIFVSSDRSDESFAQYFGEMPWLSVPYADTARRLNLSKLYGIQGIPALVMLDVDRSVITPAARVAIMDDREGRLFPWFPRALSMLSAANAEILNQEPALVLFVDSNEEEELEPVRQMLQPIAEQVIAEYKQRGEEQPLHFFYAGE-DDMADSIRDFTALPDCA--------------PLLAILDIPARVKYVKDAEELTGHVISEFVGDYLHGKLQAE 442
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: A0A0G4FAM2_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAM2_VITBC) HSP 1 Score: 175 bits (444), Expect = 4.010e-47 Identity = 92/258 (35.66%), Postives = 150/258 (58.14%), Query Frame = 1 Query: 7 KSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGD-MPWLSVPY-DGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSESPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAEARAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEI---QGKFKFMKSKKALLKPRVALLDLMQNQFAVS 765 K L +++G F+ V+A L GKV+ +YFSA+WC PCKQFTP+L Y + ++ GK FEV+FVS+D+ +F Y G MPWL++PY D K R + L V++LPTL++ DE++Q+IT GR + D + + FPW PK + +L+E+ E +T P+ +VFME + +Q + +E +A+ + + ++ +V TA+ + P S A R L L+ + GK + + P + +LD+ + V+ Sbjct: 273 KPLSQLVGTDFIDPSNRTVSANQLSGKVVGLYFSANWCPPCKQFTPVLAEAYKRFKEEGKDFEVIFVSNDEDASKFYEYFGSSMPWLAIPYGDSKRRSLLQSELEVASLPTLVLLDENRQIITKQGRALLASDPQGKKFPWRPKPVTDLAENTEKMTDYPSLVVFMEASEPKKQRELESSLEALAKEQEALPKEQQV---AIFTATNVSPRSVALRNLCKLEVVLDRAGKASAADAAASKEAPNMIILDIPDEAYYVA 527
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: A0A2R5GKL2_9STRA (Nucleoredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKL2_9STRA) HSP 1 Score: 169 bits (429), Expect = 6.580e-46 Identity = 94/286 (32.87%), Postives = 160/286 (55.94%), Query Frame = 1 Query: 10 SLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPYDGK-TRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSESPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAEARAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLK----PRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGELETKEFNL 852 SL++ LG +F+ ++G+E T L+ K + +YFSA WC PC+ FTP +Y +L+ GKP+EV+FVSSD+ E F Y +MPWL++PY+ + ++ ++ G+ +P+ ++ D+D ++ R + D + ++FPW PK + L++ I + P+ +V ME + QA+ + +AE A MV++ K P FL A + L+ RKL GLD + + + + + +K V LLD+ N + ELT+E++A F + +GEL+ L Sbjct: 148 SLEDCLGDRFIDAEGNEKTLADLKDKYVTLYFSAHWCPPCRHFTPKFIELYKKLKAEGKPWEVIFVSSDRDAEAFKGYFSEMPWLALPYEDRASKEMLSSHFGIEGIPSAIMLDKDLSVLNKGLRGYVDADPEGKDFPWKPKPVLTLTQGAGDINELPSMVVLMEQESEGTQAQFETIFTQVAETHATMVKEEKKDPMQFLVAPPGDMLADRVRKLCGLDSSKDEVRTLCNGDMCMKLHASTAVILLDIPDNGGYYELEGELTQENIAQFHKRFVSGELKDSRKQL 433
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: UPI000A2A747E (nucleoredoxin n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A747E) HSP 1 Score: 165 bits (418), Expect = 1.810e-44 Identity = 92/284 (32.39%), Postives = 154/284 (54.23%), Query Frame = 1 Query: 1 KNKSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPY-DGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSESPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAEARAKMVEDGKVR-PAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGELETKEF 846 K KS+ E++ KF+ G E+T + L+GKV+ +YFSA WC PC+ FTP+L YN ++ A K FEV+F+SSD+++E F+ Y+ MPW +VPY D + I++ GV +PTL++ DE+ ++I+ NGR + D + + FPW PK L+EL++ I + A V+ GD+ +E+++P+A++ E P F E + + GL E + +A+LD+ + V E +T E+ F+ + + +LE ++ Sbjct: 148 KPKSVFELIQGKFVNGKGEEITTDNLKGKVVGLYFSAHWCPPCRAFTPLLGKTYNAIKAAEKEFEVIFLSSDRSEESFNGYLATMPWYAVPYSDSSRKNAISKHFGVEGIPTLIIMDENWKVISINGRGAVAADPEGKEFPWKPKPLSELNDLTASILNEEACAVYFTDGDEGTLKHAKEILQPLADSYMTQAEQANEDLPIHFFYGGNNEVVDSVL-DFAGLSE---------------ENMLAILDIPSGKVYVCEKDVVTAEAAKQFIDDFLSDKLEGRKI 415
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: L8Y9U0_TUPCH (Nucleoredoxin (Fragment) n=3 Tax=Tupaia chinensis TaxID=246437 RepID=L8Y9U0_TUPCH) HSP 1 Score: 162 bits (411), Expect = 1.930e-44 Identity = 91/278 (32.73%), Postives = 152/278 (54.68%), Query Frame = 1 Query: 7 KSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPY-DGKTRGTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSESPEV-ITQKPAFIVFMEGGDKDEQARIRELVEPMAEAR-AKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASWDAGEL 831 K +E++ L+++G + + +LEG + VYFSA WC PC+ T +L Y ++++AG+ FE++FVS+D+++E F Y +MPWL+VPY D R + +L G+ +PTL+V D +LIT GR E++ D+ FPW+PK + ELS+S V + + P ++F++ D E ++L++P+AE AK + P F A E + ++ + R L E P + +LD+ V + E+T + AFV + A +L Sbjct: 49 KPFREVIAGPLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQKFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGELITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAVQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYKAKEEEAPLLFFVAGE-DDMTDSLRDYTNLPEAA--------------PLLTILDMSARAKYVMDVEEITPAIVEAFVNDFLAEKL 311
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Match: A0A6P8HWQ9_ACTTE (Nucleoredoxin n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HWQ9_ACTTE) HSP 1 Score: 164 bits (416), Expect = 3.410e-44 Identity = 92/273 (33.70%), Postives = 154/273 (56.41%), Query Frame = 1 Query: 7 KSLKEMLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLQKAGKPFEVLFVSSDKTQEEFSSYMGDMPWLSVPYDGKTR-GTIAQLLGVSALPTLLVFDEDQQLITANGRQEIIKDQKAENFPWYPKALAELSE-SPEVITQKPAFIVFMEGGDKDEQARIRELVEPMAEA-RAKMVEDGKVRPAGFLTASEIEPLSTAFRKLVGLDEIQGKFKFMKSKKALLKPRVALLDLMQNQFAVSEDVELTEESLAAFVASW 816 KS+ E++ K + S G E+T + L+GKV+ +YFSA WC PC+ FTP L YN ++ A KPFEV+F+SSD+ E F SY+ MPW +VPYD R +++ GV +PTL++ DE+ ++IT NGR I D + + FPW K L EL++ + ++ ++P I F +G ++ +E+++P+AE+ A+ E + P F A E + + VG+ E + +A++D+ + V E+ +T ++ F++ + Sbjct: 148 KSVSELMKGKLVNSKGEEITVDDLKGKVVGLYFSAHWCPPCRAFTPQLAKTYNAIKAANKPFEVIFLSSDRADESFQSYLDTMPWYAVPYDDSMRKNNVSKHFGVEGIPTLIIMDENWKVITTNGRGAIAADPEGKEFPWKIKPLCELNDLTASLLNEEPCAIYFTDG-EEPTLKHAKEILQPLAESYAAEAKEKNEDLPIQFFFAGNNEVVESLL-DFVGISE---------------ENMLAIVDIPNGKLFVCENDVVTADAAKQFISDY 403 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8168.17164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8168.17164.1 >prot_L-elsbetiae_contig8168.17164.1 ID=prot_L-elsbetiae_contig8168.17164.1|Name=mRNA_L-elsbetiae_contig8168.17164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp MLGPKFLKSDGSEVTAEALEGKVLAVYFSASWCAPCKQFTPILKSVYNQLback to top mRNA from alignment at L-elsbetiae_contig8168:447..5298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8168.17164.1 ID=mRNA_L-elsbetiae_contig8168.17164.1|Name=mRNA_L-elsbetiae_contig8168.17164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4852bp|location=Sequence derived from alignment at L-elsbetiae_contig8168:447..5298+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8168:447..5298+ >mRNA_L-elsbetiae_contig8168.17164.1 ID=mRNA_L-elsbetiae_contig8168.17164.1|Name=mRNA_L-elsbetiae_contig8168.17164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig8168:447..5298+ (Laminarionema elsbetiae ELsaHSoW15)back to top |