mRNA_L-elsbetiae_contig8143.17141.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: D7FKW2_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW2_ECTSI) HSP 1 Score: 238 bits (606), Expect = 7.290e-78 Identity = 122/144 (84.72%), Postives = 124/144 (86.11%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQ 432 MNFGAKSKDLLVELKRSDWLPPY+EDGVRGVLAEIQALY+ELTDTLGGRTT SDIPDPVKVSLVVHHQALLRNKRCLL YLKWRAD ITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQ Sbjct: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTT------------------SDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQ 126
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A835ZIC8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIC8_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.450e-37 Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = 1 Query: 10 GAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQ 432 G K+K LL EL++ DW+PP++EDGVR +L EIQAL +E++DTL + ++P VK+ + VHH L N+RCLLAY+++RA+ + LRW+TGPVVP L +LSA E + FN YDR+LT++ Q Sbjct: 5 GTKAKRLLQELRQGDWMPPFNEDGVRAILQEIQALDQEISDTLASSR-----------------QGEEMPIQVKIGMAVHHAGLTHNRRCLLAYVRYRAEKASALRWDTGPVVPDSLAPNLSAAEQDFFNKYDRLLTDYQQ 128
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A7S2XZV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV1_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.520e-33 Identity = 66/146 (45.21%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTL--GGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQ 432 MNFG + K+LL ELKRS+WLP Y+E V+ +L EI ++EL T G R +++IPD KV +VVHHQAL+RNKR LLAY +R + + LRWETGPVVP+ LQ +LS E E F+ YD +++ + + Sbjct: 1 MNFGGRGKELLQELKRSEWLPNYNEKTVKDILKEIDLYWQELCATFDNGNRG------------------NNEIPDAAKVGIVVHHQALMRNKRILLAYHMYRLEKLKALRWETGPVVPEHLQGALSGSEREFFSRYDSLVSGYCE 128
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A3R7MJX0_9STRA (Sld5 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7MJX0_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.860e-31 Identity = 66/142 (46.48%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNF 426 M AK K+LL EL+RSDWLPPY+ED VR V+ E L+EE+ L T + + + P V L+V+HQ LLRNKRCL+AYL R + I LRWETG ++P L Q+L REM+LFN YD++LT++ Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVDESGLLHEEIVRKLN---TFKDN-------------FEEQPASVHCGLIVNHQCLLRNKRCLIAYLYHRVEKIKALRWETGTIIPAPLAQNLCQREMQLFNAYDQLLTDY 126
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: G4YZC9_PHYSP (Sld5 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZC9_PHYSP) HSP 1 Score: 119 bits (298), Expect = 3.430e-31 Identity = 67/142 (47.18%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNF 426 M AK K+LL EL+RSDWLPPY+ED VR V+ E L+EEL L T ++ +P V+ +LVV HQ LLRNKRCLLAYL R + I LRWETG ++P L Q+L RE++ FN YD++LT++ Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVEESGLLHEELNRKL---ETFKEG----------------MPKSVECALVVSHQGLLRNKRCLLAYLHHRMEKIKALRWETGTIIPGPLAQNLCQREVQFFNQYDQMLTDY 123
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A0P1ATH1_PLAHL (Predicted alpha-helical protein, potentially involved in replication/repair n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATH1_PLAHL) HSP 1 Score: 116 bits (290), Expect = 1.940e-29 Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLG----GRTTVRQSPGPSKLLLPLAVKSSDIPD------PVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNF 426 M AK ++LL EL+RSDWLPPY+ED VR V+ E L EE+ + R +R + +LL L + S D V+ LV++HQ+LLRNKRCL+AY+ +R I LRWE G ++P +L Q+L RE++ FN YD++LT++ Sbjct: 1 MALNAKGRELLRELQRSDWLPPYNEDLVRQVVEESGLLDEEIARKMAYSLLSRLWMRYQTLAADILL-LLILDSTFEDNLAEHMAVQCGLVINHQSLLRNKRCLIAYIHYRMKKIKALRWEVGTIIPSQLAQNLGQREIQFFNQYDQLLTDY 151
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A6V2I296_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I296_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.190e-29 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTV-------RQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILT 420 MNFG + ++LL++LKRSDWLPPYS++GVRG L EI Y EL+D + QS S K + +P + ++V+H +A+ RNKRCLLAY ++R D + LRWET V+P ++ LS E++ F YDRI++ Sbjct: 1 MNFGQRGRELLLDLKRSDWLPPYSDEGVRGTLEEINLHYGELSDHVNASAAAAXXXXXXEQSGDRSSR----RKKDAQLPFESRAAVVLHDEAIRRNKRCLLAYHQYRMDRLRGLRWETTGVLPNHIRGLLSEAEVDFFAEYDRIVS 143
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A225VV97_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VV97_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.630e-29 Identity = 61/142 (42.96%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNF 426 M AK K+LL EL+RSDWLPPY+ED VR V+ E L+EE++ + + P V LVV+HQ LLRNKRCL+AY+ R + I LRWETG ++P L Q+L E++ FN YD++LT++ Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRRVVEESGLLHEEISKKMSMYADLVNEPAS-----------------VHCGLVVNHQCLLRNKRCLIAYVHHRMEKIKALRWETGTIIPASLAQNLCQGEVQFFNQYDQLLTDY 125
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: A0A2R5GNH7_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNH7_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.660e-29 Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 7 FGAKSKDLLVELKRSDWLPPYS----EDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVK-VSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNF 426 +GAK ++LL+ELKRS+WLP Y+ +DGVR VL EI ALY+ + + +S D+ +P L+V+H + LRNKRCLLAYLK+RAD I LRW+ G +P++L++ L A E + F+ YD IL+++ Sbjct: 7 YGAKGRELLLELKRSEWLPAYNGKRQDDGVRQVLGEIDALYKRMRSRMA--------------------ESRDMREPFYGCPLMVYHASTLRNKRCLLAYLKYRADLIGNLRWDAGSAIPEDLRRKLCAEEAQYFSAYDNILSDY 131
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Match: W7TSN7_9STRA (Dna replication complex gins protein psf1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSN7_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.110e-28 Identity = 62/143 (43.36%), Postives = 88/143 (61.54%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTTVRQSPGPSKLLLPLAVKSSDIPDPVKVSLVVHHQALLRNKRCLLAYLKWRADSITQLRWETG-PVVPQELQQSLSAREMELFNTYDRILTNF 426 M+FG K ++LL +LKRSDWLP Y+ED V L E Q G +R + LA + +++P V+L VH Q +LRNKRCLLAY+++R D + LRWETG ++P LQ+ LSA+E E F +YD+IL+++ Sbjct: 1 MDFGLKGRELLQDLKRSDWLPLYNEDAVSRCLQECQ----------GHMAQIRPA---------LAQEMTEVPPEYLVALTVHLQHILRNKRCLLAYMQYRLDKVRDLRWETGGAIIPTRLQRKLSAKESEFFASYDKILSDY 124 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8143.17141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8143.17141.1 >prot_L-elsbetiae_contig8143.17141.1 ID=prot_L-elsbetiae_contig8143.17141.1|Name=mRNA_L-elsbetiae_contig8143.17141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp MNFGAKSKDLLVELKRSDWLPPYSEDGVRGVLAEIQALYEELTDTLGGRTback to top mRNA from alignment at L-elsbetiae_contig8143:6225..7514- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8143.17141.1 ID=mRNA_L-elsbetiae_contig8143.17141.1|Name=mRNA_L-elsbetiae_contig8143.17141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig8143:6225..7514- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8143:6225..7514- >mRNA_L-elsbetiae_contig8143.17141.1 ID=mRNA_L-elsbetiae_contig8143.17141.1|Name=mRNA_L-elsbetiae_contig8143.17141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig8143:6225..7514- (Laminarionema elsbetiae ELsaHSoW15)back to top |