mRNA_L-elsbetiae_contig8141.17139.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.850e-50 Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 1 Query: 1 QAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESVEGGAWQRG 276 +AAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIP LM AAAKRHP V WVVSEPLGLQELMPRVMHAAVSESV GGAW+ G Sbjct: 122 EAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHG 213
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.980e-37 Identity = 63/92 (68.48%), Postives = 77/92 (83.70%), Query Frame = 1 Query: 1 QAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESVEGGAWQRG 276 + AHMELAEP+IE+AFD+CVAAGA+ VVLHPFFLSPGRHV+SDIPEL+ AAA RHP V W VSEPLGL LMP++M+ AV+ +++ WQ G Sbjct: 27 EVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT) HSP 1 Score: 101 bits (251), Expect = 3.680e-25 Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAV 240 AHMELAEP+IE+AFDRCV GA+ VV HPFFL PG+H DIP L AAA +HP + W+V+ P+G+ E MP VM+ A+ Sbjct: 47 AHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAI 124
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A5Q4H7Y2_9PLAN (Sirohydrochlorin cobaltochelatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H7Y2_9PLAN) HSP 1 Score: 100 bits (248), Expect = 1.040e-24 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESVE 255 AHMELAEPSI AFD CVA GA+ VVLHP+FL PG+H + DIP L AA +HP++P++V+ PLGL LM +M ++ +E Sbjct: 46 AHMELAEPSIATAFDHCVARGAEMVVLHPYFLLPGKHWSEDIPALARQAASKHPKIPFMVTAPLGLHPLMAEIMQQRIARCLE 128
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A518BYE9_9BACT (Sirohydrochlorin cobaltochelatase n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518BYE9_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 3.300e-24 Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAV 240 AHMELAEPSI AFDRCV GA +V++ P+FL PG+H DIP+L AAKRHP+VP+VV+ P+GL +M +V+H+ + Sbjct: 45 AHMELAEPSISTAFDRCVERGATRVLICPYFLLPGKHWDQDIPQLATEAAKRHPDVPFVVTAPIGLHPMMKQVIHSRI 122
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A518DNN6_9BACT (Sirohydrochlorin cobaltochelatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DNN6_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 1.220e-23 Identity = 43/82 (52.44%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESV 252 AHMELAEP+++ AFDRC+A GA+++V+HP+FL PG H DIP L AA R P+VP+VV+EPLGL L+ +V+ ++ ++ Sbjct: 44 AHMELAEPTLQTAFDRCIARGAEQIVVHPYFLLPGNHSREDIPRLAAEAAARRPDVPYVVTEPLGLHPLLGQVIRDRIAAAL 125
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A350CGA9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A350CGA9_9PLAN) HSP 1 Score: 96.7 bits (239), Expect = 1.480e-23 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESVE 255 AHMELAEPSI++AFDRCVA GA+++V+ P+FLSPGRH T DIP L+ AA HPEV W+V+ P GL + + + AVSE ++ Sbjct: 45 AHMELAEPSIQQAFDRCVARGARRIVVFPWFLSPGRHWTEDIPGLVEQAAAVHPEVQWLVTPPFGLHQGLLQ----AVSERID 123
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A2E0AVX8_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A2E0AVX8_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 1.640e-23 Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESVE 255 AHMELAEP+I +AF+RCVA GA+ V++HP+FL PGRH DIP L N AAKRH + ++V+ PLG LM +++ A + + E Sbjct: 21 AHMELAEPTINQAFERCVAQGAEVVIIHPYFLLPGRHWQQDIPRLANEAAKRHSGIRYLVTAPLGAHLLMSQIIQARIEQCTE 103
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A3M2BXR8_9BACT (Cobalamin biosynthesis protein CbiX n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2BXR8_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.870e-23 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHA 234 AHMELAEPSI AFDRCVA GA++VV+ P+FL PGRH T DIPEL AA+RHP V ++V+ P+GL LM V+ A Sbjct: 53 AHMELAEPSIATAFDRCVARGARRVVVLPYFLLPGRHWTDDIPELTRRAARRHPGVAYLVAAPIGLHPLMLEVLAA 128
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Match: A0A6P4DL50_ARADU (sirohydrochlorin ferrochelatase, chloroplastic isoform X1 n=7 Tax=Arachis TaxID=3817 RepID=A0A6P4DL50_ARADU) HSP 1 Score: 97.1 bits (240), Expect = 5.300e-23 Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 7 AHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRHPEVPWVVSEPLGLQELMPRVMHAAVSESVE 255 AHMELAEPSI +AF CV GAQ+VV+ PFFLSPGRH DIP L + AAK HP V ++V+ PLGL EL+ VM+ + ++ Sbjct: 95 AHMELAEPSIRDAFQSCVEQGAQRVVISPFFLSPGRHWNQDIPSLSSEAAKEHPGVSYIVTAPLGLHELLVDVMNDRIKHCLK 177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8141.17139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8141.17139.1 >prot_L-elsbetiae_contig8141.17139.1 ID=prot_L-elsbetiae_contig8141.17139.1|Name=mRNA_L-elsbetiae_contig8141.17139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp MELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPELMNAAAKRback to top mRNA from alignment at L-elsbetiae_contig8141:1616..1927+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8141.17139.1 ID=mRNA_L-elsbetiae_contig8141.17139.1|Name=mRNA_L-elsbetiae_contig8141.17139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=312bp|location=Sequence derived from alignment at L-elsbetiae_contig8141:1616..1927+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8141:1616..1927+ >mRNA_L-elsbetiae_contig8141.17139.1 ID=mRNA_L-elsbetiae_contig8141.17139.1|Name=mRNA_L-elsbetiae_contig8141.17139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig8141:1616..1927+ (Laminarionema elsbetiae ELsaHSoW15)back to top |